Lsi10G012520 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi10G012520
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionRipening-related protein
Locationchr10 : 16746379 .. 16747003 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAACAATCGCTCACTTCTATTCATCTCACTTTGGGAAGTTTAAAAAGTATTGCTTTCCCATGGCAAAATTGGCTTTGTTGGTTTCTCTTTTCGTTTTAGTTGTTTTTGTTCTAGGTCTTTCTCAAGCAATCTCTTCTTGCAATGGACCGTGTCAAACTCTAATCGATTGTAAAGGTCAATTGATTTGTATTAATTGCCAATGTAATGATGATCCCGACGTTGGAACTCACATTTGCTCAAATGGTGGCGGCAGCGGCGGCAGTAGTGGTGGAGGAAAATTTCCGCCATCTTAACAAACAACGACTTTAGTAGAGGTGGCGATGGTGGAGCCCCATCGGAGTGTGATGGCAAGTTCCATCATAACTCTCATCCAATAGTGGCATTGTCCACAGGTTGGTACAATGGAGGCTCTAGATGTGGGAAGAAGATCAGAATTACGGCTAGAAATGGAAGGTCAATTCTGGCTAAAGTGGTGGACGAGTGTGATTCCATTAATGGATGCGACAAGGCACATGCTCATCAGCCGCCGTGTCGAAACAATATTGTGGATGGTTCAAATAAAGTATGGAACGCTTTGGGACTTGACATAGATGTAGGTGAAGAACCTGTTATCTGGTCAGATGCT

mRNA sequence

AAACAATCGCTCACTTCTATTCATCTCACTTTGGGAAGTTTAAAAAGTCTTTCTCAAGCAATCTCTTCTTGCAATGGACCGTGTCAAACTCTAATCGATTGTAAAGGTCAATTGATTTGTATTAATTGCCAATGTAATGATGATCCCGACGTTGGAACTCACATTTGCTCAAATGGTGGCGGCAGCGGCGGCAGTAGTGGTGGCGATGGTGGAGCCCCATCGGAGTGTGATGGCAAGTTCCATCATAACTCTCATCCAATAGTGGCATTGTCCACAGGTTGGTACAATGGAGGCTCTAGATGTGGGAAGAAGATCAGAATTACGGCTAGAAATGGAAGGTCAATTCTGGCTAAAGTGGTGGACGAGTGTGATTCCATTAATGGATGCGACAAGGCACATGCTCATCAGCCGCCGTGTCGAAACAATATTGTGGATGGTTCAAATAAAGTATGGAACGCTTTGGGACTTGACATAGATGTAGGTGAAGAACCTGTTATCTGGTCAGATGCT

Coding sequence (CDS)

AAACAATCGCTCACTTCTATTCATCTCACTTTGGGAAGTTTAAAAAGTCTTTCTCAAGCAATCTCTTCTTGCAATGGACCGTGTCAAACTCTAATCGATTGTAAAGGTCAATTGATTTGTATTAATTGCCAATGTAATGATGATCCCGACGTTGGAACTCACATTTGCTCAAATGGTGGCGGCAGCGGCGGCAGTAGTGGTGGCGATGGTGGAGCCCCATCGGAGTGTGATGGCAAGTTCCATCATAACTCTCATCCAATAGTGGCATTGTCCACAGGTTGGTACAATGGAGGCTCTAGATGTGGGAAGAAGATCAGAATTACGGCTAGAAATGGAAGGTCAATTCTGGCTAAAGTGGTGGACGAGTGTGATTCCATTAATGGATGCGACAAGGCACATGCTCATCAGCCGCCGTGTCGAAACAATATTGTGGATGGTTCAAATAAAGTATGGAACGCTTTGGGACTTGACATAGATGTAGGTGAAGAACCTGTTATCTGGTCAGATGCT

Protein sequence

KQSLTSIHLTLGSLKSLSQAISSCNGPCQTLIDCKGQLICINCQCNDDPDVGTHICSNGGGSGGSSGGDGGAPSECDGKFHHNSHPIVALSTGWYNGGSRCGKKIRITARNGRSILAKVVDECDSINGCDKAHAHQPPCRNNIVDGSNKVWNALGLDIDVGEEPVIWSDA
Homology
[Close]
BLAST of Lsi10G012520 vs. Swiss-Prot
Match: GRI22_VITVI (Ripening-related protein grip22 OS=Vitis vinifera GN=grip22 PE=2 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 6.9e-52
Identity = 110/201 (54.73%), Postives = 124/201 (61.69%), Query Frame = 1 

Query: 13  SLKSLSQAISSCNGPCQTLIDCKGQLICINCQCNDDPDVGTHICSNGGGS---------- 72
           SL  L+  +SSC G CQTL D +GQLICIN +CNDDP+VGTHIC     +          
Sbjct: 20  SLPFLALGLSSCGGSCQTLNDYEGQLICINGECNDDPEVGTHICGGNSSTPSPPPPSTCQ 79

Query: 73  -GGSSGGDGGA--------------------------------PSECDGKFHHNSHPIVA 132
             G+    GG                                 PS CD K+H NS  IVA
Sbjct: 80  PSGTLACKGGKPKNTYTCSPPITSSTPAVLTNNNFEKGGDGGGPSACDNKYHDNSERIVA 139

Query: 133 LSTGWYNGGSRCGKKIRITARNGRSILAKVVDECDSINGCDKAHAHQPPCRNNIVDGSNK 171
           LSTGWYNGGSRCGK IRITA+NGRS+LAKVVDECDS++GCDK HA QPPC NNIVDGSN 
Sbjct: 140 LSTGWYNGGSRCGKMIRITAQNGRSVLAKVVDECDSMHGCDKEHAGQPPCDNNIVDGSNA 199

[Close]
BLAST of Lsi10G012520 vs. Swiss-Prot
Match: KIWEL_ACTDE (Kiwellin OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 9.4e-49
Identity = 106/189 (56.08%), Postives = 118/189 (62.43%), Query Frame = 1 

Query: 21  ISSCNGPCQTLIDCKGQLICINCQCNDDPDVGTHIC-----SNGGGSGGSSG-------- 80
           ISSCNGPC+ L DC GQLICI  +CNDDP VGTHIC     S+  G    SG        
Sbjct: 1   ISSCNGPCRDLNDCDGQLICIKGKCNDDPQVGTHICRGTTHSHQPGGCKPSGTLTCRGKS 60

Query: 81  --------------------GD------GGAPSECDGKFHHNSHPIVALSTGWYNGGSRC 140
                                D       G PSECD  +H+N+  IVALSTGWYNGGSRC
Sbjct: 61  YPTYDCSPPVTSSTPAKLTNNDFSEGGDDGGPSECDESYHNNNERIVALSTGWYNGGSRC 120

Query: 141 GKKIRITARNGRSILAKVVDECDSINGCDKAHAHQPPCRNNIVDGSNKVWNALGLDIDVG 171
           GK IRITA NG+S+ AKVVDECDS +GCDK HA QPPCRNNIVDGSN VW+ALGLD +VG
Sbjct: 121 GKMIRITASNGKSVSAKVVDECDSRHGCDKEHAGQPPCRNNIVDGSNAVWSALGLDKNVG 180

[Close]
BLAST of Lsi10G012520 vs. Swiss-Prot
Match: RIP2_ORYSJ (Putative ripening-related protein 2 OS=Oryza sativa subsp. japonica GN=Os02g0637000 PE=3 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 3.1e-36
Identity = 72/106 (67.92%), Postives = 83/106 (78.30%), Query Frame = 1 

Query: 66  SGGDGGAPSECDGKFHHNSHPIVALSTGWYNGGSRCGKKIRITARNGRSILAKVVDECDS 125
           +GGDGG PSECDGKFH N+  +VALSTGWY  G RC K IRI A NGRS+LAKVVDECDS
Sbjct: 88  AGGDGGDPSECDGKFHKNTERVVALSTGWYANGRRCNKNIRINA-NGRSVLAKVVDECDS 147

Query: 126 INGCDKAHAHQPPCRNNIVDGSNKVWNALGL-DIDVGEEPVIWSDA 171
           ++GCDK HA+QPPCR N+VD S  VW+AL +   DVGE  + WSDA
Sbjct: 148 LHGCDKEHAYQPPCRPNVVDASQAVWDALRITGEDVGEYDITWSDA 192

[Close]
BLAST of Lsi10G012520 vs. Swiss-Prot
Match: RIP1_ORYSJ (Putative ripening-related protein 1 OS=Oryza sativa subsp. japonica GN=Os04g0364800 PE=3 SV=2)

HSP 1 Score: 146.7 bits (369), Expect = 2.2e-34
Identity = 87/173 (50.29%), Postives = 104/173 (60.12%), Query Frame = 1 

Query: 9   LTLGSLKSLSQAISSCNGPCQTLIDCKGQLICINCQCNDDPDVGTHICS--NGGGSGGS- 68
           + L SL  LS+    CN      I       C +C C       T+ CS    G S  + 
Sbjct: 15  VVLVSLPGLSRGDGECNP--SGAIRSSTTHRCQDC-CKAGQSYPTYTCSPPTTGSSTDAV 74

Query: 69  -------SGGDGGAPSECDGKFHHNSHPIVALSTGWYNGGSRCGKKIRITARNGRSILAK 128
                  +GGDGG PSECD  +H N+  +VALSTGWY GGSRCGK +RI A NGRS+LAK
Sbjct: 75  MTLNDFDAGGDGGGPSECDEMYHSNTELVVALSTGWYAGGSRCGKSVRINA-NGRSVLAK 134

Query: 129 VVDECDSINGCDKAHAHQPPCRNNIVDGSNKVWNALGL-DIDVGEEPVIWSDA 171
           VVDECDS  GCD+ HA+QPPCR N+VD S  VW+ALG+   DVGE  + WSDA
Sbjct: 135 VVDECDSQRGCDEEHAYQPPCRPNVVDASQAVWDALGITGEDVGEYDITWSDA 183

[Close]
BLAST of Lsi10G012520 vs. Swiss-Prot
Match: RIP4_ORYSJ (Putative ripening-related protein 4 OS=Oryza sativa subsp. japonica GN=Os10g0490666 PE=3 SV=2)

HSP 1 Score: 138.3 bits (347), Expect = 8.0e-32
Identity = 64/105 (60.95%), Postives = 77/105 (73.33%), Query Frame = 1 

Query: 67  GGDGGAPSECDGKFHHNSHPIVALSTGWY--NGGSRCGKKIRITARNGRSILAKVVDECD 126
           GGDGG  S CDG+FH ++  +VALS+GW   +G SRC + IR+ A NGRS LA+VVDECD
Sbjct: 111 GGDGGGRSSCDGRFHPDTAMVVALSSGWLRLDGASRCNRMIRVAAGNGRSALARVVDECD 170

Query: 127 SINGCDKAHAHQPPCRNNIVDGSNKVWNALGLDIDVGEEPVIWSD 170
           S+NGCD  H  +PPC N++VDGS  VW ALGLD  VGE  V WSD
Sbjct: 171 SVNGCDAEHNFEPPCPNDVVDGSPAVWKALGLDEGVGEFKVTWSD 215

[Close]
BLAST of Lsi10G012520 vs. TrEMBL
Match: K7NBR3_SIRGR (Ripening-related protein OS=Siraitia grosvenorii PE=2 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 1.0e-65
Identity = 134/209 (64.11%), Postives = 147/209 (70.33%), Query Frame = 1 

Query: 4   LTSIHLTLGSLKSLSQAISSCNGPCQTLIDCKGQLICINCQCNDDPDVGTHICSNGGGSG 63
           L S+ L++ SL SLS AISSCNGPC+TL DC GQLICIN +CNDDP+VGTH+CS+GGG G
Sbjct: 7   LVSLFLSVISLPSLSLAISSCNGPCKTLNDCTGQLICINSRCNDDPNVGTHVCSSGGGGG 66

Query: 64  GS-------SGGD-----------------------------------GGAPSECDGKFH 123
            S       S G+                                   GG PSECDGKFH
Sbjct: 67  SSPPSNSCQSSGNLNCKGKSFPQFKCSPPVTRSTRAILTNNDFSQGGDGGDPSECDGKFH 126

Query: 124 HNSHPIVALSTGWYNGGSRCGKKIRITARNGRSILAKVVDECDSINGCDKAHAHQPPCRN 171
            NS  IVALSTGWYNGGSRCGK I+I A+NGRS+LAKVVDECDSINGCDKAHA QPPCRN
Sbjct: 127 SNSELIVALSTGWYNGGSRCGKNIKIIAKNGRSVLAKVVDECDSINGCDKAHAFQPPCRN 186

[Close]
BLAST of Lsi10G012520 vs. TrEMBL
Match: A0A0A0KBF2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G147470 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 8.2e-60
Identity = 124/210 (59.05%), Postives = 137/210 (65.24%), Query Frame = 1 

Query: 4   LTSIHLTLGSLKSLSQAISSCNGPCQTLIDCKGQLICINCQCNDDPDVGTHICSNGGGSG 63
           L S+ L+      L +A+SSCNGPCQTL DC+GQLICIN +C DDP++GTHICS  GG G
Sbjct: 8   LFSVILSTIMFFHLCEALSSCNGPCQTLNDCQGQLICINGKCLDDPNLGTHICSGSGGGG 67

Query: 64  GSSGGDGGA-------------------------------------------PSECDGKF 123
           G  GG  G                                            PSECDGKF
Sbjct: 68  GGGGGGHGCHSIGNLNCKGKTFPQFKCSPPVTSSTRAVLTNNDFSKGGSGGDPSECDGKF 127

Query: 124 HHNSHPIVALSTGWYNGGSRCGKKIRITARNGRSILAKVVDECDSINGCDKAHAHQPPCR 171
           H NS PIVALSTGWYNGGSRCG+ I+ITA NGRS+LAKVVDECDSINGCDKAHA  PPC 
Sbjct: 128 HDNSDPIVALSTGWYNGGSRCGQMIQITASNGRSVLAKVVDECDSINGCDKAHAGLPPCH 187

[Close]
BLAST of Lsi10G012520 vs. TrEMBL
Match: V4SG37_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029991mg PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 4.4e-53
Identity = 109/201 (54.23%), Postives = 128/201 (63.68%), Query Frame = 1 

Query: 14  LKSLSQAISSCNGPCQTLIDCKGQLICINCQCNDDPDVGTHICSNGGGSGGSSGGDGGA- 73
           L  LS AIS CNGPC+T  DC+G+LICIN  CNDDP+VG+H C+ GGG GG  GG GG+ 
Sbjct: 17  LPLLSNAISQCNGPCRTPDDCEGELICINGICNDDPEVGSHTCTGGGGGGGGGGGGGGSC 76

Query: 74  -------------------------------------------PSECDGKFHHNSHPIVA 133
                                                      PSECDGK+H NS PIVA
Sbjct: 77  HSSGTLRCHGKPYPLYSCSPPVTSSTYAKLTNNDFSEGGEGGDPSECDGKYHDNSVPIVA 136

Query: 134 LSTGWYNGGSRCGKKIRITARNGRSILAKVVDECDSINGCDKAHAHQPPCRNNIVDGSNK 171
           LSTGWYNGGSRCG  I+ITA+NGRS++AKVVDECDS++GCD  HA +PPC N+IVDGS+ 
Sbjct: 137 LSTGWYNGGSRCGHMIKITAQNGRSVMAKVVDECDSMHGCDSEHADEPPCDNDIVDGSDA 196

[Close]
BLAST of Lsi10G012520 vs. TrEMBL
Match: A0A0A0KDC3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G147480 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.3e-52
Identity = 122/209 (58.37%), Postives = 133/209 (63.64%), Query Frame = 1 

Query: 4   LTSIHLTLGSLKSLSQAISSCNGPCQTL-----------IDCK-----GQLIC------- 63
           L S    + SL  LSQAISSC  PCQTL             C      G  IC       
Sbjct: 7   LVSFFFLVLSLLGLSQAISSCREPCQTLKNCKGQLICINGQCNDDPDVGTRICSTDSDNG 66

Query: 64  -------------INC------QCNDDPDVGTHICSNGGGSGGSSGGDGGAPSECDGKFH 123
                        ++C      Q    P V +   +    +  S GGDGG PSECDGKFH
Sbjct: 67  ADGEKFRCEAFGRLHCKGKSFPQFKCSPRVTSSTRAILTNNDFSKGGDGGDPSECDGKFH 126

Query: 124 HNSHPIVALSTGWYNGGSRCGKKIRITARNGRSILAKVVDECDSINGCDKAHAHQPPCRN 171
           HNS PIVALSTGWYNGGSRCGKKIRITARNGRS+LAKVVDECD+INGCDKAHAHQPPCRN
Sbjct: 127 HNSQPIVALSTGWYNGGSRCGKKIRITARNGRSVLAKVVDECDTINGCDKAHAHQPPCRN 186

[Close]
BLAST of Lsi10G012520 vs. TrEMBL
Match: A0A067EYJ6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g041049mg PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.3e-52
Identity = 108/201 (53.73%), Postives = 127/201 (63.18%), Query Frame = 1 

Query: 14  LKSLSQAISSCNGPCQTLIDCKGQLICINCQCNDDPDVGTHICSNGGGSGGSSGGD---- 73
           L  LS AIS CNGPC+T  DC+G+LICIN  CNDDP+VG+H C+ GGG GG  GG     
Sbjct: 17  LPLLSNAISQCNGPCRTPDDCEGELICINGICNDDPEVGSHTCTGGGGGGGGGGGGGVSC 76

Query: 74  ----------------------------------------GGAPSECDGKFHHNSHPIVA 133
                                                   GG PSECDGK+H NS P+VA
Sbjct: 77  HSSGTLRCHGKPYPLYSCSPPVTSSTDAKLTNNDFSEGGEGGDPSECDGKYHDNSVPVVA 136

Query: 134 LSTGWYNGGSRCGKKIRITARNGRSILAKVVDECDSINGCDKAHAHQPPCRNNIVDGSNK 171
           LSTGWYNGGSRCG  I+ITA+NGRS++AKVVDECDS++GCD  HA +PPC N+IVDGS+ 
Sbjct: 137 LSTGWYNGGSRCGHMIKITAQNGRSVMAKVVDECDSMHGCDSEHADEPPCDNDIVDGSDA 196

[Close]
BLAST of Lsi10G012520 vs. NCBI nr
Match: gi|343466195|gb|AEM42991.1| (ripening-related protein [Siraitia grosvenorii])

HSP 1 Score: 257.7 bits (657), Expect = 1.4e-65
Identity = 134/209 (64.11%), Postives = 147/209 (70.33%), Query Frame = 1 

Query: 4   LTSIHLTLGSLKSLSQAISSCNGPCQTLIDCKGQLICINCQCNDDPDVGTHICSNGGGSG 63
           L S+ L++ SL SLS AISSCNGPC+TL DC GQLICIN +CNDDP+VGTH+CS+GGG G
Sbjct: 7   LVSLFLSVISLPSLSLAISSCNGPCKTLNDCTGQLICINSRCNDDPNVGTHVCSSGGGGG 66

Query: 64  GS-------SGGD-----------------------------------GGAPSECDGKFH 123
            S       S G+                                   GG PSECDGKFH
Sbjct: 67  SSPPSNSCQSSGNLNCKGKSFPQFKCSPPVTRSTRAILTNNDFSQGGDGGDPSECDGKFH 126

Query: 124 HNSHPIVALSTGWYNGGSRCGKKIRITARNGRSILAKVVDECDSINGCDKAHAHQPPCRN 171
            NS  IVALSTGWYNGGSRCGK I+I A+NGRS+LAKVVDECDSINGCDKAHA QPPCRN
Sbjct: 127 SNSELIVALSTGWYNGGSRCGKNIKIIAKNGRSVLAKVVDECDSINGCDKAHAFQPPCRN 186

[Close]
BLAST of Lsi10G012520 vs. NCBI nr
Match: gi|659130825|ref|XP_008465372.1| (PREDICTED: kiwellin-like [Cucumis melo])

HSP 1 Score: 239.2 bits (609), Expect = 5.3e-60
Identity = 122/197 (61.93%), Postives = 134/197 (68.02%), Query Frame = 1 

Query: 17  LSQAISSCNGPCQTLIDCKGQLICINCQCNDDPDVGTHICSNGGGSGGSS--GGD----- 76
           L +AISSCNGPC+TL DC GQLICI  +C+DDPDVG+H+CSNGGG GGSS   G+     
Sbjct: 20  LCEAISSCNGPCKTLNDCDGQLICIRGKCDDDPDVGSHVCSNGGGGGGSSPPSGNSCQPF 79

Query: 77  -------------------------------------GGAPSECDGKFHHNSHPIVALST 136
                                                GG PSECD KFH NS  IVALST
Sbjct: 80  SHKVCKGTSHPQYKCSPPVTSSTRAILTNNDFSQGGDGGGPSECDDKFHSNSELIVALST 139

Query: 137 GWYNGGSRCGKKIRITARNGRSILAKVVDECDSINGCDKAHAHQPPCRNNIVDGSNKVWN 170
           GWYN GSRCGKKI+ITARNG+S+LAKVVDECDSINGCD  HA QPPCRNNIVD SN VW+
Sbjct: 140 GWYNRGSRCGKKIKITARNGKSVLAKVVDECDSINGCDTEHAQQPPCRNNIVDASNAVWD 199

[Close]
BLAST of Lsi10G012520 vs. NCBI nr
Match: gi|778713247|ref|XP_011657008.1| (PREDICTED: kiwellin-like [Cucumis sativus])

HSP 1 Score: 238.8 bits (608), Expect = 6.9e-60
Identity = 121/197 (61.42%), Postives = 132/197 (67.01%), Query Frame = 1 

Query: 17  LSQAISSCNGPCQTLIDCKGQLICINCQCNDDPDVGTHICSNGGGSGGSSGGDGGA---- 76
           L +A+SSCNGPCQTL DC+GQLICIN +C DDP++GTHICS  GG GG  GG  G     
Sbjct: 5   LCEALSSCNGPCQTLNDCQGQLICINGKCLDDPNLGTHICSGSGGGGGGGGGGHGCHSIG 64

Query: 77  ---------------------------------------PSECDGKFHHNSHPIVALSTG 136
                                                  PSECDGKFH NS PIVALSTG
Sbjct: 65  NLNCKGKTFPQFKCSPPVTSSTRAVLTNNDFSKGGSGGDPSECDGKFHDNSDPIVALSTG 124

Query: 137 WYNGGSRCGKKIRITARNGRSILAKVVDECDSINGCDKAHAHQPPCRNNIVDGSNKVWNA 171
           WYNGGSRCG+ I+ITA NGRS+LAKVVDECDSINGCDKAHA  PPC NNIVDGS+ VW+A
Sbjct: 125 WYNGGSRCGQMIQITASNGRSVLAKVVDECDSINGCDKAHAGLPPCHNNIVDGSDAVWHA 184

[Close]
BLAST of Lsi10G012520 vs. NCBI nr
Match: gi|700191649|gb|KGN46853.1| (hypothetical protein Csa_6G147470 [Cucumis sativus])

HSP 1 Score: 238.0 bits (606), Expect = 1.2e-59
Identity = 124/210 (59.05%), Postives = 137/210 (65.24%), Query Frame = 1 

Query: 4   LTSIHLTLGSLKSLSQAISSCNGPCQTLIDCKGQLICINCQCNDDPDVGTHICSNGGGSG 63
           L S+ L+      L +A+SSCNGPCQTL DC+GQLICIN +C DDP++GTHICS  GG G
Sbjct: 8   LFSVILSTIMFFHLCEALSSCNGPCQTLNDCQGQLICINGKCLDDPNLGTHICSGSGGGG 67

Query: 64  GSSGGDGGA-------------------------------------------PSECDGKF 123
           G  GG  G                                            PSECDGKF
Sbjct: 68  GGGGGGHGCHSIGNLNCKGKTFPQFKCSPPVTSSTRAVLTNNDFSKGGSGGDPSECDGKF 127

Query: 124 HHNSHPIVALSTGWYNGGSRCGKKIRITARNGRSILAKVVDECDSINGCDKAHAHQPPCR 171
           H NS PIVALSTGWYNGGSRCG+ I+ITA NGRS+LAKVVDECDSINGCDKAHA  PPC 
Sbjct: 128 HDNSDPIVALSTGWYNGGSRCGQMIQITASNGRSVLAKVVDECDSINGCDKAHAGLPPCH 187

[Close]
BLAST of Lsi10G012520 vs. NCBI nr
Match: gi|659130827|ref|XP_008465373.1| (PREDICTED: kiwellin-like [Cucumis melo])

HSP 1 Score: 232.6 bits (592), Expect = 5.0e-58
Identity = 124/207 (59.90%), Postives = 134/207 (64.73%), Query Frame = 1 

Query: 4   LTSIHLTLGSLKSLSQAISSCNGPCQTLIDCKGQLICINCQCNDDPDVGTHICSNGGGSG 63
           L S  L++     L  A+SSCNGPCQTL DC+GQLICIN  C DDPDVGTHICS GGG G
Sbjct: 8   LFSFILSIIMFFHLCGALSSCNGPCQTLNDCQGQLICINGICLDDPDVGTHICSGGGGGG 67

Query: 64  GSS----------------------------------GGDGGA------PSECDGKFHHN 123
           G S                                    D         PSECDGKFH N
Sbjct: 68  GPSPRCQSIGNLNCKGKSFPQFKCSPPVTSSTRAVLTNNDFSKGGSGGDPSECDGKFHSN 127

Query: 124 SHPIVALSTGWYNGGSRCGKKIRITARNGRSILAKVVDECDSINGCDKAHAHQPPCRNNI 171
           S PIVALSTGWYNGGSRCGK I+ITA NGRS+LAKVVDECDS+NGCDK HA  PPC NNI
Sbjct: 128 SDPIVALSTGWYNGGSRCGKMIKITASNGRSVLAKVVDECDSVNGCDKEHAGLPPCHNNI 187

The following BLAST results are available for this feature:
BLAST of Lsi10G012520 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GRI22_VITVI6.9e-5254.73Ripening-related protein grip22 OS=Vitis vinifera GN=grip22 PE=2 SV=1[more]
KIWEL_ACTDE9.4e-4956.08Kiwellin OS=Actinidia deliciosa PE=1 SV=1[more]
RIP2_ORYSJ3.1e-3667.92Putative ripening-related protein 2 OS=Oryza sativa subsp. japonica GN=Os02g0637... [more]
RIP1_ORYSJ2.2e-3450.29Putative ripening-related protein 1 OS=Oryza sativa subsp. japonica GN=Os04g0364... [more]
RIP4_ORYSJ8.0e-3260.95Putative ripening-related protein 4 OS=Oryza sativa subsp. japonica GN=Os10g0490... [more]
BLAST of Lsi10G012520 vs. TrEMBL
Match NameE-valueIdentityDescription
K7NBR3_SIRGR1.0e-6564.11Ripening-related protein OS=Siraitia grosvenorii PE=2 SV=1[more]
A0A0A0KBF2_CUCSA8.2e-6059.05Uncharacterized protein OS=Cucumis sativus GN=Csa_6G147470 PE=4 SV=1[more]
V4SG37_9ROSI4.4e-5354.23Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029991mg PE=4 SV=1[more]
A0A0A0KDC3_CUCSA1.3e-5258.37Uncharacterized protein OS=Cucumis sativus GN=Csa_6G147480 PE=4 SV=1[more]
A0A067EYJ6_CITSI1.3e-5253.73Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g041049mg PE=4 SV=1[more]
BLAST of Lsi10G012520 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Lsi10G012520 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|343466195|gb|AEM42991.1|1.4e-6564.11ripening-related protein [Siraitia grosvenorii][more]
gi|659130825|ref|XP_008465372.1|5.3e-6061.93PREDICTED: kiwellin-like [Cucumis melo][more]
gi|778713247|ref|XP_011657008.1|6.9e-6061.42PREDICTED: kiwellin-like [Cucumis sativus][more]
gi|700191649|gb|KGN46853.1|1.2e-5959.05hypothetical protein Csa_6G147470 [Cucumis sativus][more]
gi|659130827|ref|XP_008465373.1|5.0e-5859.90PREDICTED: kiwellin-like [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR009009RlpA-like_DPBB
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi10G012520.1Lsi10G012520.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009009RlpA-like protein, double-psi beta-barrel domainGENE3DG3DSA:2.40.40.10coord: 70..167
score: 5.4
IPR009009RlpA-like protein, double-psi beta-barrel domainunknownSSF50685Barwin-like endoglucanasescoord: 53..168
score: 1.57
NoneNo IPR availablePANTHERPTHR33191FAMILY NOT NAMEDcoord: 67..170
score: 6.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi10G012520ClCG02G021300Watermelon (Charleston Gray)lsiwcgB054
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi10G012520Watermelon (97103) v2lsiwmbB040
Lsi10G012520Watermelon (97103) v2lsiwmbB052
Lsi10G012520Watermelon (97103) v2lsiwmbB067
Lsi10G012520Wax gourdlsiwgoB059
Lsi10G012520Wax gourdlsiwgoB068
Lsi10G012520Wax gourdlsiwgoB087
Lsi10G012520Wax gourdlsiwgoB095
Lsi10G012520Bottle gourd (USVL1VR-Ls)lsilsiB040
Lsi10G012520Bottle gourd (USVL1VR-Ls)lsilsiB025
Lsi10G012520Bottle gourd (USVL1VR-Ls)lsilsiB041
Lsi10G012520Cucumber (Gy14) v1cgylsiB493
Lsi10G012520Cucumber (Gy14) v1cgylsiB624
Lsi10G012520Cucurbita maxima (Rimu)cmalsiB227
Lsi10G012520Cucurbita maxima (Rimu)cmalsiB506
Lsi10G012520Cucurbita maxima (Rimu)cmalsiB547
Lsi10G012520Cucurbita maxima (Rimu)cmalsiB593
Lsi10G012520Cucurbita maxima (Rimu)cmalsiB744
Lsi10G012520Cucurbita maxima (Rimu)cmalsiB781
Lsi10G012520Cucurbita moschata (Rifu)cmolsiB185
Lsi10G012520Cucurbita moschata (Rifu)cmolsiB215
Lsi10G012520Cucurbita moschata (Rifu)cmolsiB490
Lsi10G012520Cucurbita moschata (Rifu)cmolsiB532
Lsi10G012520Cucurbita moschata (Rifu)cmolsiB575
Lsi10G012520Cucurbita moschata (Rifu)cmolsiB736
Lsi10G012520Cucurbita moschata (Rifu)cmolsiB773
Lsi10G012520Cucurbita pepo (Zucchini)cpelsiB219
Lsi10G012520Cucurbita pepo (Zucchini)cpelsiB389
Lsi10G012520Cucurbita pepo (Zucchini)cpelsiB487
Lsi10G012520Cucurbita pepo (Zucchini)cpelsiB588
Lsi10G012520Wild cucumber (PI 183967)cpilsiB160
Lsi10G012520Wild cucumber (PI 183967)cpilsiB415
Lsi10G012520Cucumber (Chinese Long) v2culsiB161
Lsi10G012520Cucumber (Chinese Long) v2culsiB412
Lsi10G012520Melon (DHL92) v3.5.1lsimeB070
Lsi10G012520Melon (DHL92) v3.5.1lsimeB055
Lsi10G012520Watermelon (Charleston Gray)lsiwcgB037
Lsi10G012520Watermelon (Charleston Gray)lsiwcgB069
Lsi10G012520Watermelon (97103) v1lsiwmB048
Lsi10G012520Watermelon (97103) v1lsiwmB064
Lsi10G012520Watermelon (97103) v1lsiwmB078
Lsi10G012520Cucumber (Gy14) v2cgyblsiB146
Lsi10G012520Cucumber (Gy14) v2cgyblsiB377
Lsi10G012520Cucumber (Gy14) v2cgyblsiB384
Lsi10G012520Melon (DHL92) v3.6.1lsimedB055
Lsi10G012520Melon (DHL92) v3.6.1lsimedB072
Lsi10G012520Silver-seed gourdcarlsiB222
Lsi10G012520Silver-seed gourdcarlsiB303
Lsi10G012520Silver-seed gourdcarlsiB649
Lsi10G012520Cucumber (Chinese Long) v3cuclsiB177
Lsi10G012520Cucumber (Chinese Long) v3cuclsiB439
Lsi10G012520Cucumber (Chinese Long) v3cuclsiB444