Lsi10G011840 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAACGCGATATTGTCTTCTTCCCCTCGCGCATCGCAGAATTCATCGTCTATCATTCGCCCCATCAGCGGCAGCCTTCGGACAACGATTCGTCGCTCTCCTGAAACCTCCAAATTCATGTGAGTTTCAATCCCTTCTTCCATTTCTTCTTTAGGATTTTCACGGATCTACTTTGATTATCTGATCTAGGATGGTGGTAGTCGTAATGTTTAACCATTTATTTTTACGGTCAATCTGCTTCACGAATGTTGCTTCTTTTTATGTATTTCTTCTTGGAATGATTTGTTCTCCTTTAATTAATTTTTATTTTGTCGAAGGTAACGTTAGTTTCAACTTCGTGAACAGTTTTTGGAGATTTAGATTTATATGCTGTTTCCCTATTCTGATTGAAATACACTATAAATTCCATTATTTAATCAATGAATCATCGATCTTGAGATATTGGTAACTTATGGGAAAAAGGAAAAAGGTTATTTAACTTATTTTCGTTTACTTTTAATATCTATTCATGTTTTCTTGCCTATTTTGTGGAAATGGGACTTACTTCGTTCTGCAGCAGCTGAATTGAGATTGATCGTTTTTTCCTTTGAGCTAGGGCCAGCCTAGCTGAAACAACTTGGGACTGTGTTAAGTTTCTCTAACCCATAATCATATATGCGATTTATTGAATTGAATCAAACGTGTTAGATGATATAGTATTAAATTTTTCTTCATTTTCCTTCGCCCATTAGTTTAAGTTTTTGGGTCAATCGGTGATTTAAAATGGTATCAGAGCAAGTAATCCAAGGAGGACCCCTGTAATGTTATTTCCTCCCCAATTAATATTGATTTCCATTCGTTGGTCTTCTTCATACTGCAACCTCACAAGTGAGGGGGAGTGTCGGATGATATAATATTCAATTTGCTTTCACCCATTAGCTTAAGCTTTTGGGGCAATTAGTGATTTAAGAATGTATGTGTGAGAATGGACTCTTGAAAATGAAGAATTGTGCATGGGATGTCTATTTTATCTATGGATCTTCTGTAACCAATGAGTAGTGGGTCCTGAACGGGTAAATTTTGGAAATCAATGTAGGGCTCGTTTGGTTTGACTTGAGAAAAAAATATGTTTCAAAAAACTCATTTTTATTTAAACTCTTTTGATAAAAACTGTTTAAAATTCACTTCAAAATCTATTTTGAATGGTTTCCAAATACTCCAATTTTTTCCAAAATGATATGTTTTTAAAATTAAACACTTCAAAATGTATTCTAAACGCACCTGTAATCTTCTGACTGGAATTTCTCTGTTTCTAGATGGCAGATCATTGAGTATTTATATTCTTTTGCTTTCTAGAGCTGTATTCATTTTTCTAGCCGTAAGCACTATATCATGCTTTTTAAATTTAACGTTGGAACAAAGGCCTTTGATTTCATGTTTGTTGTACAGAAGAAATGAGACGTGTTAGCACAAACTTATTTTCTATTTTCTATATGAGGATGGATTTGAAGTTGGAAGATGTAGGAAGTAGCTTTAATGAAATTTTATTAATTTGTTATTTGAATTATTTTTGCAGGATGACTGAAGTCACTGAACAACCATTTAGGCCTCGTGAAAAACTTATTGAAAGGCAAAAGTATTTTCAGAGCATCCACAAGCACACATATCTTAAAGGGCCATTGGATAAGGTCACCTCTGTTGCCATTCCAATCGCTTTGGCAGCTTCATCATTGTATCTTATAGTAAGTTCTCCCCAATTTTGAAGAACATGAAATTACTTGTATAGCATTACGTATAATGTCGGTCTTACTCCTGTTTCATGCAGGGACGGGGGATTTATAACATGTCACATGGCATCGGAAAGAAAGAATGAGGTCAACAGTCTCTATGCGTCTTAATTTCAAAGAGTTTTTATGCTCTGGACCCATGTTAATTTTGTTATTATCTTTGTCTAATAATTGCTTAGTTGCAGACTCGGCTATCAATTGATTTGAATATCATTCTCAGATTCCTTGTGCATATTGGAATGGTTTGTCTCAGATTATTGTTTTTCTCATTTTTGAGAAATTATCTTGTTGAGTTTGCTTTCCTGTGATCTGATTCTTATGGTGGTGCAAGTAACATATCCAGAATAGTTGTTTCTTTTTACTTT AAAAACGCGATATTGTCTTCTTCCCCTCGCGCATCGCAGAATTCATCGTCTATCATTCGCCCCATCAGCGGCAGCCTTCGGACAACGATTCGTCGCTCTCCTGAAACCTCCAAATTCATGATGACTGAAGTCACTGAACAACCATTTAGGCCTCGTGAAAAACTTATTGAAAGGCAAAAGTATTTTCAGAGCATCCACAAGCACACATATCTTAAAGGGCCATTGGATAAGGTCACCTCTGTTGCCATTCCAATCGCTTTGGCAGCTTCATCATTGTATCTTATAGGACGGGGGATTTATAACATGTCACATGGCATCGGAAAGAAAGAATGAGGTCAACAGTCTCTATGCGTCTTAATTTCAAAGAGTTTTTATGCTCTGGACCCATGTTAATTTTGTTATTATCTTTGTCTAATAATTGCTTAGTTGCAGACTCGGCTATCAATTGATTTGAATATCATTCTCAGATTCCTTGTGCATATTGGAATGGTTTGTCTCAGATTATTGTTTTTCTCATTTTTGAGAAATTATCTTGTTGAGTTTGCTTTCCTGTGATCTGATTCTTATGGTGGTGCAAGTAACATATCCAGAATAGTTGTTTCTTTTTACTTT AAAAACGCGATATTGTCTTCTTCCCCTCGCGCATCGCAGAATTCATCGTCTATCATTCGCCCCATCAGCGGCAGCCTTCGGACAACGATTCGTCGCTCTCCTGAAACCTCCAAATTCATGATGACTGAAGTCACTGAACAACCATTTAGGCCTCGTGAAAAACTTATTGAAAGGCAAAAGTATTTTCAGAGCATCCACAAGCACACATATCTTAAAGGGCCATTGGATAAGGTCACCTCTGTTGCCATTCCAATCGCTTTGGCAGCTTCATCATTGTATCTTATAGGACGGGGGATTTATAACATGTCACATGGCATCGGAAAGAAAGAATGA KNAILSSSPRASQNSSSIIRPISGSLRTTIRRSPETSKFMMTEVTEQPFRPREKLIERQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE
BLAST of Lsi10G011840 vs. TrEMBL
Match: A0A0A0KBQ2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G151650 PE=4 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 6.3e-29 Identity = 67/70 (95.71%), Postives = 67/70 (95.71%), Query Frame = 1
BLAST of Lsi10G011840 vs. TrEMBL
Match: W9SK31_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_021482 PE=4 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 7.8e-27 Identity = 62/70 (88.57%), Postives = 66/70 (94.29%), Query Frame = 1
BLAST of Lsi10G011840 vs. TrEMBL
Match: A0A0A0KDL3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G151660 PE=4 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 7.8e-27 Identity = 63/70 (90.00%), Postives = 67/70 (95.71%), Query Frame = 1
BLAST of Lsi10G011840 vs. TrEMBL
Match: A0A067EKA3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g035248mg PE=4 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 1.3e-26 Identity = 60/66 (90.91%), Postives = 65/66 (98.48%), Query Frame = 1
BLAST of Lsi10G011840 vs. TrEMBL
Match: W9R3F4_9ROSA (Histidine-containing phosphotransfer protein 1 OS=Morus notabilis GN=L484_008998 PE=4 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 2.3e-26 Identity = 59/70 (84.29%), Postives = 66/70 (94.29%), Query Frame = 1
BLAST of Lsi10G011840 vs. TAIR10
Match: AT4G21105.1 (AT4G21105.1 cytochrome-c oxidases;electron carriers) HSP 1 Score: 115.5 bits (288), Expect = 2.0e-26 Identity = 54/67 (80.60%), Postives = 63/67 (94.03%), Query Frame = 1
BLAST of Lsi10G011840 vs. NCBI nr
Match: gi|700191724|gb|KGN46928.1| (hypothetical protein Csa_6G151650 [Cucumis sativus]) HSP 1 Score: 134.8 bits (338), Expect = 9.1e-29 Identity = 67/70 (95.71%), Postives = 67/70 (95.71%), Query Frame = 1
BLAST of Lsi10G011840 vs. NCBI nr
Match: gi|659117461|ref|XP_008458612.1| (PREDICTED: uncharacterized protein LOC103497961 [Cucumis melo]) HSP 1 Score: 131.0 bits (328), Expect = 1.3e-27 Identity = 64/70 (91.43%), Postives = 68/70 (97.14%), Query Frame = 1
BLAST of Lsi10G011840 vs. NCBI nr
Match: gi|571494077|ref|XP_006592740.1| (PREDICTED: uncharacterized protein LOC100800807 isoform X1 [Glycine max]) HSP 1 Score: 129.8 bits (325), Expect = 2.9e-27 Identity = 60/72 (83.33%), Postives = 69/72 (95.83%), Query Frame = 1
BLAST of Lsi10G011840 vs. NCBI nr
Match: gi|703162082|ref|XP_010112961.1| (hypothetical protein L484_021482 [Morus notabilis]) HSP 1 Score: 127.9 bits (320), Expect = 1.1e-26 Identity = 62/70 (88.57%), Postives = 66/70 (94.29%), Query Frame = 1
BLAST of Lsi10G011840 vs. NCBI nr
Match: gi|449456118|ref|XP_004145797.1| (PREDICTED: uncharacterized protein LOC101208002 isoform X2 [Cucumis sativus]) HSP 1 Score: 127.9 bits (320), Expect = 1.1e-26 Identity = 63/70 (90.00%), Postives = 67/70 (95.71%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |