Lsi10G009100 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi10G009100
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Ras GTPase-activating-like protein rng2 isoform 2
Location	chr10 : 13573238 .. 13574922 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGATTTGATTATACGGTGTAATTGCAGTTTGGGAAAAGGAAGGGGAAAAGAAACAGATACAGAAAAAGAGTATAGAGAAATTCGATATCGAGTGGGGGAGTGCGACGAACAGGGGCGGTTACGAGGTTAGGACGGTTCGTTGGTGGGTAGGTGGATTTTTTCAAATGGTATATGATGCTTTGCAATTCATTGAGAGATCGACTTCGGCCATGGCTTCGTGATTATGATAGGCTTCAGTCTTTCGCAGTCATTCTCATTTATATTCAGGTGCATTCTTGGCCCCCATCGTCACTGTCATTCTTTGTTATTTCCATTTTGCATTCTTAATCTAATTATTATTCTAAATACACATGAGATAGATCGGGTGCGCATTGATTGGATCCCTAGGGGCATTGTACAACGGTGTTTTGCTTATAAATTTGGCGATCGCATTGTTCGCTTTGGTAGCCATAGAGAGCAGCAGTCAGAGTCTTGGTCGTACATATGCTGTTCTCCTGTTCTCTGCGATTTTCCTCGACATCTTCTGGTTTATTCTTTTCACCTACGACACATGGTCTCTACCTCTCTTTCGTTTTAGTATGTTTGGTTTGTTTCTGAGAATGGGAGTCCGGACTGCTGATTACTTAGTGATGTCTTACCCTTGTTCATAGAGTAAAATTAGAAAGGATGCATTCAGAACAAAGCTTGTGTTATATTATATAATTCTAATTTGCATATTCATATGCTTCGTATGATACCCACTGGGTACCCTATCCCCCCTTGGTCTCTTTACCAATTGTTTTCCTTTTCTTTCTCCCCAAAAATACATTTCCTCCAGTTCTATATTCTTTAACTACTTGGATGATTTCATAACAAACCTTCCTCGTAGTTTCATGTTTGTCACTGGTCCATGGAAGCACTGCAGTATATCATATAGATGAAGCTATTCAATTAATGCTGAAACTTCACACGCTAAGTTGATACTCTAATTTCTGACAGAATTTGATTTTGAATTAGCTATGATTAATAAAAAGAGATTTTAAAGTAAGCTTTGATCTTGTATAGTTGCAACAACACTTGAACGTTTTATCATCTGTCACTGCTCGCACATCACCCAATCTACATTATTTATTTTTGTAAAACTCTATTAGAGCAATGTATTTTCCTGCATCCTGACATCCATCTTCTTGCCTGCCTTTTCTTTTCCAATGTTCATTGAGTGCGCATGTGCATAATGTGCTTCTAAATTGATGCATGGTGTCGACTGCTGTTTTGCCCTGTAAATTGAATGAAAGATTGCTTGTATGCAGGAACATCTCATCCGAGCAATATGGACCCCTTTTTACCTTTTCAGTGAAGCTTACTCTGGCCATGCAGATTATTGGATTTTCTGTTAGGTTATCGTCTTCACTACTGTGGATTCAAATTTACAGGTTGGGGATTTCATACATGGAAACTTCAGTTCCCCGAGAGGCAGATTACGATTTGAGAAATAGTTTTCTTAGCCCAGCTACTCCTGTTGTAGTTAGACAACCATCAGGTTCGGATGATATGATAGGGGGCTCTATCTATGATCCAACTTATTATTCGTCCCTATTCGAAGATGGTCAAGATACTAAATCTTTGTCTGGGGTAATGTATCAATTTTTTAATCTACTCATGCATGCACCCGTTCTTGATCTCTTGTCATTCATTTACTAG

mRNA sequence

ATGAATGATTTGATTATACGGTGTAATTGCAGTTTGGGAAAAGGAAGGGGAAAAGAAACAGATACAGAAAAAGAGTATAGAGAAATTCGATATCGAGTGGGGGAGTGCGACGAACAGGGGCGGTTACGAGATCGACTTCGGCCATGGCTTCGTGATTATGATAGGCTTCAGTCTTTCGCAGTCATTCTCATTTATATTCAGATCGGGTGCGCATTGATTGGATCCCTAGGGGCATTGTACAACGGTGTTTTGCTTATAAATTTGGCGATCGCATTGTTCGCTTTGGTAGCCATAGAGAGCAGCAGTCAGAGTCTTGGTCGTACATATGCTGTTCTCCTGTTCTCTGCGATTTTCCTCGACATCTTCTGGTTTATTCTTTTCACCTACGACACATGGAACATCTCATCCGAGCAATATGGACCCCTTTTTACCTTTTCAGTGAAGCTTACTCTGGCCATGCAGATTATTGGATTTTCTGTTAGGTTATCGTCTTCACTACTGTGGATTCAAATTTACAGGTTGGGGATTTCATACATGGAAACTTCAGTTCCCCGAGAGGCAGATTACGATTTGAGAAATAGTTTTCTTAGCCCAGCTACTCCTGTTGTAGTTAGACAACCATCAGGTTCGGATGATATGATAGGGGGCTCTATCTATGATCCAACTTATTATTCGTCCCTATTCGAAGATGGTCAAGATACTAAATCTTTGTCTGGGGTAATGTATCAATTTTTTAATCTACTCATGCATGCACCCGTTCTTGATCTCTTGTCATTCATTTACTAG

Coding sequence (CDS)

ATGAATGATTTGATTATACGGTGTAATTGCAGTTTGGGAAAAGGAAGGGGAAAAGAAACAGATACAGAAAAAGAGTATAGAGAAATTCGATATCGAGTGGGGGAGTGCGACGAACAGGGGCGGTTACGAGATCGACTTCGGCCATGGCTTCGTGATTATGATAGGCTTCAGTCTTTCGCAGTCATTCTCATTTATATTCAGATCGGGTGCGCATTGATTGGATCCCTAGGGGCATTGTACAACGGTGTTTTGCTTATAAATTTGGCGATCGCATTGTTCGCTTTGGTAGCCATAGAGAGCAGCAGTCAGAGTCTTGGTCGTACATATGCTGTTCTCCTGTTCTCTGCGATTTTCCTCGACATCTTCTGGTTTATTCTTTTCACCTACGACACATGGAACATCTCATCCGAGCAATATGGACCCCTTTTTACCTTTTCAGTGAAGCTTACTCTGGCCATGCAGATTATTGGATTTTCTGTTAGGTTATCGTCTTCACTACTGTGGATTCAAATTTACAGGTTGGGGATTTCATACATGGAAACTTCAGTTCCCCGAGAGGCAGATTACGATTTGAGAAATAGTTTTCTTAGCCCAGCTACTCCTGTTGTAGTTAGACAACCATCAGGTTCGGATGATATGATAGGGGGCTCTATCTATGATCCAACTTATTATTCGTCCCTATTCGAAGATGGTCAAGATACTAAATCTTTGTCTGGGGTAATGTATCAATTTTTTAATCTACTCATGCATGCACCCGTTCTTGATCTCTTGTCATTCATTTACTAG

Protein sequence

MNDLIIRCNCSLGKGRGKETDTEKEYREIRYRVGECDEQGRLRDRLRPWLRDYDRLQSFAVILIYIQIGCALIGSLGALYNGVLLINLAIALFALVAIESSSQSLGRTYAVLLFSAIFLDIFWFILFTYDTWNISSEQYGPLFTFSVKLTLAMQIIGFSVRLSSSLLWIQIYRLGISYMETSVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGGSIYDPTYYSSLFEDGQDTKSLSGVMYQFFNLLMHAPVLDLLSFIY

Homology

[Close]

BLAST of Lsi10G009100 vs. TrEMBL
Match: A0A0A0KWY7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G266940 PE=4 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 5.1e-101
Identity = 193/201 (96.02%), Postives = 198/201 (98.51%), Query Frame = 1


Query: 42  LRDRLRPWLRDYDRLQSFAVILIYIQIGCALIGSLGALYNGVLLINLAIALFALVAIESS 101
           LRDRLRPWLRDYDRLQSFAVILIYIQIGCALIGSLGALYNGVLLINLAIALFALVAIESS
Sbjct: 6   LRDRLRPWLRDYDRLQSFAVILIYIQIGCALIGSLGALYNGVLLINLAIALFALVAIESS 65

Query: 102 SQSLGRTYAVLLFSAIFLDIFWFILFTYDTWNISSEQYGPLFTFSVKLTLAMQIIGFSVR 161
           SQSLGRTYAVLLFSAIFLD+FWFILF YDTWNISS+QYGPLFTFSVKLTLAMQIIGFSVR
Sbjct: 66  SQSLGRTYAVLLFSAIFLDVFWFILFAYDTWNISSKQYGPLFTFSVKLTLAMQIIGFSVR 125

Query: 162 LSSSLLWIQIYRLGISYMETSVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGGSIYDP 221
           LSSSLLWIQIYRLGISYMETSVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGGSIYDP
Sbjct: 126 LSSSLLWIQIYRLGISYMETSVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGGSIYDP 185

Query: 222 TYYSSLFEDGQDTKSLSGVMY 243
           TYYSSLFEDGQD+K LSG+ +
Sbjct: 186 TYYSSLFEDGQDSKCLSGISH 206

[Close]

BLAST of Lsi10G009100 vs. TrEMBL
Match: A0A067JBA1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21518 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 4.5e-81
Identity = 160/198 (80.81%), Postives = 175/198 (88.38%), Query Frame = 1


Query: 40  GRLRDRLRPWLRDYDRLQSFAVILIYIQIGCALIGSLGALYNGVLLINLAIALFALVAIE 99
           G L+DR++ WLRDYD LQ  AVILIYIQIGCALIGSLGALYNGVLLINLAIALFALVAIE
Sbjct: 5   GVLKDRIQNWLRDYDSLQYLAVILIYIQIGCALIGSLGALYNGVLLINLAIALFALVAIE 64

Query: 100 SSSQSLGRTYAVLLFSAIFLDIFWFILFTYDTWNISSEQYGPLFTFSVKLTLAMQIIGFS 159
           SSSQSLGRTYAVLLF AI LDIFWFILFT+D WNISSE+YGP F FSVKLTLAMQI+GFS
Sbjct: 65  SSSQSLGRTYAVLLFCAILLDIFWFILFTHDIWNISSERYGPFFIFSVKLTLAMQIVGFS 124

Query: 160 VRLSSSLLWIQIYRLGISYMETSVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGGSIY 219
           VRLSSSLLWIQIYRLG+SY E++ PREAD+DLR+SFLSP TP  VR+ S SD  +GGSIY
Sbjct: 125 VRLSSSLLWIQIYRLGVSYGESTAPREADFDLRHSFLSPVTPAAVRECSDSDVALGGSIY 184

Query: 220 DPTYYSSLFEDGQDTKSL 238
           DP YYSSLFEDG+  + L
Sbjct: 185 DPAYYSSLFEDGRSNRYL 202

[Close]

BLAST of Lsi10G009100 vs. TrEMBL
Match: A0A068VCW9_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00012407001 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 5.6e-76
Identity = 150/198 (75.76%), Postives = 172/198 (86.87%), Query Frame = 1


Query: 42  LRDRLRPWLRDYDRLQSFAVILIYIQIGCALIGSLGALYNGVLLINLAIALFALVAIESS 101
           LR +++ WLRDYD++QS AVILIYIQIGC+LIGSLGALYNGVLLI+L IALFALVAIESS
Sbjct: 9   LRTQIQTWLRDYDKIQSSAVILIYIQIGCSLIGSLGALYNGVLLIDLGIALFALVAIESS 68

Query: 102 SQSLGRTYAVLLFSAIFLDIFWFILFTYDTWNISSEQYGPLFTFSVKLTLAMQIIGFSVR 161
           SQSLGRTYAVLLF +I LDI WFILF  + W+ISS+ YG    FSVKLTL+MQIIGF VR
Sbjct: 69  SQSLGRTYAVLLFCSILLDITWFILFAREIWHISSDIYGTFVIFSVKLTLSMQIIGFFVR 128

Query: 162 LSSSLLWIQIYRLGISYMETSVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGGSIYDP 221
           LSSS LWIQ+YRLG+SY+ETSVPRE+D DLRNSFL+PATP + R PSGSDD++GGSIYDP
Sbjct: 129 LSSSFLWIQMYRLGVSYLETSVPRESDADLRNSFLNPATPSIDRHPSGSDDVLGGSIYDP 188

Query: 222 TYYSSLFEDGQDTKSLSG 240
            YYSSLFE+G+D   L G
Sbjct: 189 AYYSSLFEEGKDDAHLHG 206

[Close]

BLAST of Lsi10G009100 vs. TrEMBL
Match: M5W0Y3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010744mg PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 9.6e-76
Identity = 149/192 (77.60%), Postives = 169/192 (88.02%), Query Frame = 1


Query: 42  LRDRLRPWLRDYDRLQSFAVILIYIQIGCALIGSLGALYNGVLLINLAIALFALVAIESS 101
           LRDR++PWLRDYDRLQS AVIL+YIQ+GCAL+GSLGALYNGVLLINLAIALFALVAIESS
Sbjct: 6   LRDRIQPWLRDYDRLQSLAVILLYIQVGCALVGSLGALYNGVLLINLAIALFALVAIESS 65

Query: 102 SQSLGRTYAVLLFSAIFLDIFWFILFTYDTWNISSEQYGPLFTFSVKLTLAMQIIGFSVR 161
           SQSLGRTYAVLL   +FLD+FWFILF+++ WN+S       + FSVKLTL MQI+GFSVR
Sbjct: 66  SQSLGRTYAVLLVCTVFLDVFWFILFSHEIWNLSPGSNTIWYIFSVKLTLVMQIVGFSVR 125

Query: 162 LSSSLLWIQIYRLGISYMET-SVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGGSIYD 221
           LSSS LWIQIYRLG+SY++T ++PREAD+DLRNSFLSP TPVV RQ S S D +GGSIYD
Sbjct: 126 LSSSFLWIQIYRLGLSYVDTIALPREADFDLRNSFLSPTTPVVPRQTSDSSDALGGSIYD 185

Query: 222 PTYYSSLFEDGQ 233
           P YYSSLFEDGQ
Sbjct: 186 PAYYSSLFEDGQ 197

[Close]

BLAST of Lsi10G009100 vs. TrEMBL
Match: B9SBM4_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0342700 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 1.3e-75
Identity = 153/199 (76.88%), Postives = 173/199 (86.93%), Query Frame = 1


Query: 40  GRLRDRLRPWLRDYDRLQSFAVILIYIQIGCALIGSLGALYNGVLLINLAIALFALVAIE 99
           G ++DRL+ W+RDYD LQ  AVILIYIQIGCALIGSLGALYNGVLLINL IALFALVAIE
Sbjct: 5   GVVKDRLQNWIRDYDSLQYLAVILIYIQIGCALIGSLGALYNGVLLINLGIALFALVAIE 64

Query: 100 SSSQSLGRTYAVLLFSAIFLDIFWFILFTYDTWNISSEQYGPLFTFSVKLTLAMQIIGFS 159
           SSSQSLGRTYAVLLF ++FLDI WFILFT+D WNISSE YG  F FSVKLTL+MQI+GFS
Sbjct: 65  SSSQSLGRTYAVLLFCSLFLDISWFILFTHDIWNISSETYGIFFVFSVKLTLSMQIVGFS 124

Query: 160 VRLSSSLLWIQIYRLGISYMETSVPREADYDLRNSFLSPATPVVV-RQPSGSDDMIGGSI 219
           VRLSSSLLWIQIYRLG+SY E+S  READYDLRNSFLSP TP  V R+ S SD ++GGSI
Sbjct: 125 VRLSSSLLWIQIYRLGVSYAESSGTREADYDLRNSFLSPVTPAAVPRECSDSDVVLGGSI 184

Query: 220 YDPTYYSSLFEDGQDTKSL 238
           YDP Y+SSLF+D ++ ++L
Sbjct: 185 YDPAYFSSLFDDCRNNRNL 203

[Close]

BLAST of Lsi10G009100 vs. TAIR10
Match: AT1G55535.1 (AT1G55535.1 unknown protein)

HSP 1 Score: 282.0 bits (720), Expect = 3.9e-76
Identity = 143/193 (74.09%), Postives = 166/193 (86.01%), Query Frame = 1


Query: 40  GRLRDRLRPWLRDYDRLQSFAVILIYIQIGCALIGSLGALYNGVLLINLAIALFALVAIE 99
           G LRDR+ PWLRDY +LQS AV LIY QIGCALIGSLGALYNGVLLINLAIALFALVAIE
Sbjct: 5   GSLRDRIHPWLRDYVKLQSLAVFLIYAQIGCALIGSLGALYNGVLLINLAIALFALVAIE 64

Query: 100 SSSQSLGRTYAVLLFSAIFLDIFWFILFTYDTWNISSEQYGPLFTFSVKLTLAMQIIGFS 159
           S+SQSLGRTYAVLLF A+ LDI WFILFT + W+IS+E YG  F FSVKLT+AM++IGF 
Sbjct: 65  SNSQSLGRTYAVLLFCALLLDISWFILFTEEIWSISAETYGTFFIFSVKLTMAMEMIGFF 124

Query: 160 VRLSSSLLWIQIYRLGISYMETSVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGGSIY 219
           VRLSSSLLW QIYRLG + ++TS+PRE D DLRNSFL+P TP + RQ SG+++++GGSIY
Sbjct: 125 VRLSSSLLWFQIYRLGAAIVDTSLPRETDSDLRNSFLNPPTPAIARQCSGAEEILGGSIY 184

Query: 220 DPTYYSSLFEDGQ 233
           DP YY+SLFE+ Q
Sbjct: 185 DPAYYTSLFEESQ 197

[Close]

BLAST of Lsi10G009100 vs. TAIR10
Match: AT3G13420.1 (AT3G13420.1 unknown protein)

HSP 1 Score: 229.2 bits (583), Expect = 3.0e-60
Identity = 129/224 (57.59%), Postives = 154/224 (68.75%), Query Frame = 1


Query: 42  LRDRLRPWLRDYDRLQSFAVILIYIQIGCALIGSLGALYNGVLLINLAIALFALVAIESS 101
           LR+R+  WLRDY RLQS  +ILIY QIGCALIGSLGALYNGV+LINLAIALF LVAIES+
Sbjct: 6   LRNRIHNWLRDYVRLQSVVLILIYAQIGCALIGSLGALYNGVVLINLAIALFGLVAIESN 65

Query: 102 SQSLGRTYAVLLFSAIFLDIFWFILFTYDTWNISSEQYGPLFTFSVKLTLAMQIIGFSVR 161
           SQSLGRTYAVLLF AI LD+ WFILF+ + WNISS+ Y   + FSVKLTLAM+I GF VR
Sbjct: 66  SQSLGRTYAVLLFCAILLDVSWFILFSKEIWNISSDMYQVFYIFSVKLTLAMEIAGFVVR 125

Query: 162 LSSSLLWIQIYRLGISYMETSVPREADYDLRNSFLSP------------------ATPVV 221
           LSSSLLW QIYRLG S +++  PR++D DLRNSFL P                    P +
Sbjct: 126 LSSSLLWFQIYRLGASIIDSPFPRQSDSDLRNSFLEPPLLARQRSRDPELRNSFLQAPAI 185

Query: 222 VRQPSGSDDMIGGSIYDPTYYSSLFEDGQDTKSLSGVMYQFFNL 248
            +Q S SD+++  SI +P  Y+ L + G    +L      F  L
Sbjct: 186 AKQRSRSDEILEDSIDEPASYTPLLDGGLSNITLPNATQVFLFL 229

[Close]

BLAST of Lsi10G009100 vs. NCBI nr
Match: gi|449463828|ref|XP_004149633.1| (PREDICTED: uncharacterized protein LOC101215314 isoform X1 [Cucumis sativus])

HSP 1 Score: 375.6 bits (963), Expect = 7.3e-101
Identity = 193/201 (96.02%), Postives = 198/201 (98.51%), Query Frame = 1


Query: 42  LRDRLRPWLRDYDRLQSFAVILIYIQIGCALIGSLGALYNGVLLINLAIALFALVAIESS 101
           LRDRLRPWLRDYDRLQSFAVILIYIQIGCALIGSLGALYNGVLLINLAIALFALVAIESS
Sbjct: 6   LRDRLRPWLRDYDRLQSFAVILIYIQIGCALIGSLGALYNGVLLINLAIALFALVAIESS 65

Query: 102 SQSLGRTYAVLLFSAIFLDIFWFILFTYDTWNISSEQYGPLFTFSVKLTLAMQIIGFSVR 161
           SQSLGRTYAVLLFSAIFLD+FWFILF YDTWNISS+QYGPLFTFSVKLTLAMQIIGFSVR
Sbjct: 66  SQSLGRTYAVLLFSAIFLDVFWFILFAYDTWNISSKQYGPLFTFSVKLTLAMQIIGFSVR 125

Query: 162 LSSSLLWIQIYRLGISYMETSVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGGSIYDP 221
           LSSSLLWIQIYRLGISYMETSVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGGSIYDP
Sbjct: 126 LSSSLLWIQIYRLGISYMETSVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGGSIYDP 185

Query: 222 TYYSSLFEDGQDTKSLSGVMY 243
           TYYSSLFEDGQD+K LSG+ +
Sbjct: 186 TYYSSLFEDGQDSKCLSGISH 206

[Close]

BLAST of Lsi10G009100 vs. NCBI nr
Match: gi|778692699|ref|XP_011653507.1| (PREDICTED: uncharacterized protein LOC101215314 isoform X2 [Cucumis sativus])

HSP 1 Score: 375.6 bits (963), Expect = 7.3e-101
Identity = 193/201 (96.02%), Postives = 198/201 (98.51%), Query Frame = 1


Query: 42  LRDRLRPWLRDYDRLQSFAVILIYIQIGCALIGSLGALYNGVLLINLAIALFALVAIESS 101
           LRDRLRPWLRDYDRLQSFAVILIYIQIGCALIGSLGALYNGVLLINLAIALFALVAIESS
Sbjct: 6   LRDRLRPWLRDYDRLQSFAVILIYIQIGCALIGSLGALYNGVLLINLAIALFALVAIESS 65

Query: 102 SQSLGRTYAVLLFSAIFLDIFWFILFTYDTWNISSEQYGPLFTFSVKLTLAMQIIGFSVR 161
           SQSLGRTYAVLLFSAIFLD+FWFILF YDTWNISS+QYGPLFTFSVKLTLAMQIIGFSVR
Sbjct: 66  SQSLGRTYAVLLFSAIFLDVFWFILFAYDTWNISSKQYGPLFTFSVKLTLAMQIIGFSVR 125

Query: 162 LSSSLLWIQIYRLGISYMETSVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGGSIYDP 221
           LSSSLLWIQIYRLGISYMETSVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGGSIYDP
Sbjct: 126 LSSSLLWIQIYRLGISYMETSVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGGSIYDP 185

Query: 222 TYYSSLFEDGQDTKSLSGVMY 243
           TYYSSLFEDGQD+K LSG+ +
Sbjct: 186 TYYSSLFEDGQDSKCLSGISH 206

[Close]

BLAST of Lsi10G009100 vs. NCBI nr
Match: gi|659097987|ref|XP_008449916.1| (PREDICTED: uncharacterized protein LOC103491645 isoform X3 [Cucumis melo])

HSP 1 Score: 372.1 bits (954), Expect = 8.0e-100
Identity = 193/201 (96.02%), Postives = 197/201 (98.01%), Query Frame = 1


Query: 42  LRDRLRPWLRDYDRLQSFAVILIYIQIGCALIGSLGALYNGVLLINLAIALFALVAIESS 101
           LRDRLRP LRDYDRLQSFAVILIYIQIGCALIGSLGALYNGVLLINLAIALFALVAIESS
Sbjct: 6   LRDRLRPCLRDYDRLQSFAVILIYIQIGCALIGSLGALYNGVLLINLAIALFALVAIESS 65

Query: 102 SQSLGRTYAVLLFSAIFLDIFWFILFTYDTWNISSEQYGPLFTFSVKLTLAMQIIGFSVR 161
           SQSLGRTYAVLLFSAIFLD+FWFILF YDTWNISSEQYGPLFTFSVKLTLAMQIIGFSVR
Sbjct: 66  SQSLGRTYAVLLFSAIFLDVFWFILFAYDTWNISSEQYGPLFTFSVKLTLAMQIIGFSVR 125

Query: 162 LSSSLLWIQIYRLGISYMETSVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGGSIYDP 221
           LSSSLLWIQIYRLGISYMETSVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGGSIYDP
Sbjct: 126 LSSSLLWIQIYRLGISYMETSVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGGSIYDP 185

Query: 222 TYYSSLFEDGQDTKSLSGVMY 243
           TYYSSLFEDGQD+K LSG+ +
Sbjct: 186 TYYSSLFEDGQDSKCLSGISH 206

[Close]

BLAST of Lsi10G009100 vs. NCBI nr
Match: gi|659097990|ref|XP_008449917.1| (PREDICTED: uncharacterized protein LOC103491645 isoform X4 [Cucumis melo])

HSP 1 Score: 372.1 bits (954), Expect = 8.0e-100
Identity = 193/201 (96.02%), Postives = 197/201 (98.01%), Query Frame = 1


Query: 42  LRDRLRPWLRDYDRLQSFAVILIYIQIGCALIGSLGALYNGVLLINLAIALFALVAIESS 101
           LRDRLRP LRDYDRLQSFAVILIYIQIGCALIGSLGALYNGVLLINLAIALFALVAIESS
Sbjct: 6   LRDRLRPCLRDYDRLQSFAVILIYIQIGCALIGSLGALYNGVLLINLAIALFALVAIESS 65

Query: 102 SQSLGRTYAVLLFSAIFLDIFWFILFTYDTWNISSEQYGPLFTFSVKLTLAMQIIGFSVR 161
           SQSLGRTYAVLLFSAIFLD+FWFILF YDTWNISSEQYGPLFTFSVKLTLAMQIIGFSVR
Sbjct: 66  SQSLGRTYAVLLFSAIFLDVFWFILFAYDTWNISSEQYGPLFTFSVKLTLAMQIIGFSVR 125

Query: 162 LSSSLLWIQIYRLGISYMETSVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGGSIYDP 221
           LSSSLLWIQIYRLGISYMETSVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGGSIYDP
Sbjct: 126 LSSSLLWIQIYRLGISYMETSVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGGSIYDP 185

Query: 222 TYYSSLFEDGQDTKSLSGVMY 243
           TYYSSLFEDGQD+K LSG+ +
Sbjct: 186 TYYSSLFEDGQDSKCLSGISH 206

[Close]

BLAST of Lsi10G009100 vs. NCBI nr
Match: gi|659097983|ref|XP_008449914.1| (PREDICTED: uncharacterized protein LOC103491645 isoform X1 [Cucumis melo])

HSP 1 Score: 372.1 bits (954), Expect = 8.0e-100
Identity = 193/201 (96.02%), Postives = 197/201 (98.01%), Query Frame = 1


Query: 42  LRDRLRPWLRDYDRLQSFAVILIYIQIGCALIGSLGALYNGVLLINLAIALFALVAIESS 101
           LRDRLRP LRDYDRLQSFAVILIYIQIGCALIGSLGALYNGVLLINLAIALFALVAIESS
Sbjct: 6   LRDRLRPCLRDYDRLQSFAVILIYIQIGCALIGSLGALYNGVLLINLAIALFALVAIESS 65

Query: 102 SQSLGRTYAVLLFSAIFLDIFWFILFTYDTWNISSEQYGPLFTFSVKLTLAMQIIGFSVR 161
           SQSLGRTYAVLLFSAIFLD+FWFILF YDTWNISSEQYGPLFTFSVKLTLAMQIIGFSVR
Sbjct: 66  SQSLGRTYAVLLFSAIFLDVFWFILFAYDTWNISSEQYGPLFTFSVKLTLAMQIIGFSVR 125

Query: 162 LSSSLLWIQIYRLGISYMETSVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGGSIYDP 221
           LSSSLLWIQIYRLGISYMETSVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGGSIYDP
Sbjct: 126 LSSSLLWIQIYRLGISYMETSVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGGSIYDP 185

Query: 222 TYYSSLFEDGQDTKSLSGVMY 243
           TYYSSLFEDGQD+K LSG+ +
Sbjct: 186 TYYSSLFEDGQDSKCLSGISH 206

The following BLAST results are available for this feature:

BLAST of Lsi10G009100 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi10G009100 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KWY7_CUCSA	5.1e-101	96.02	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G266940 PE=4 SV=1	[more]
A0A067JBA1_JATCU	4.5e-81	80.81	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21518 PE=4 SV=1	[more]
A0A068VCW9_COFCA	5.6e-76	75.76	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00012407001 PE=4 SV=1	[more]
M5W0Y3_PRUPE	9.6e-76	77.60	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010744mg PE=4 SV=1	[more]
B9SBM4_RICCO	1.3e-75	76.88	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0342700 PE=4 SV=1	[more]

BLAST of Lsi10G009100 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G55535.1	3.9e-76	74.09	unknown protein	[more]
AT3G13420.1	3.0e-60	57.59	unknown protein	[more]

BLAST of Lsi10G009100 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449463828\|ref\|XP_004149633.1\|	7.3e-101	96.02	PREDICTED: uncharacterized protein LOC101215314 isoform X1 [Cucumis sativus]	[more]
gi\|778692699\|ref\|XP_011653507.1\|	7.3e-101	96.02	PREDICTED: uncharacterized protein LOC101215314 isoform X2 [Cucumis sativus]	[more]
gi\|659097987\|ref\|XP_008449916.1\|	8.0e-100	96.02	PREDICTED: uncharacterized protein LOC103491645 isoform X3 [Cucumis melo]	[more]
gi\|659097990\|ref\|XP_008449917.1\|	8.0e-100	96.02	PREDICTED: uncharacterized protein LOC103491645 isoform X4 [Cucumis melo]	[more]
gi\|659097983\|ref\|XP_008449914.1\|	8.0e-100	96.02	PREDICTED: uncharacterized protein LOC103491645 isoform X1 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi10G009100.1	Lsi10G009100.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35471	FAMILY NOT NAMED	coord: 37..233 score: 1.2E
None	No IPR available	PANTHER	PTHR35471:SF1	SUBFAMILY NOT NAMED	coord: 37..233 score: 1.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi10G009100	CSPI04G12400	Wild cucumber (PI 183967)	cpilsiB245
Lsi10G009100	Cucsa.152580	Cucumber (Gy14) v1	cgylsiB245
Lsi10G009100	CmaCh02G011590	Cucurbita maxima (Rimu)	cmalsiB540
Lsi10G009100	CmaCh20G000030	Cucurbita maxima (Rimu)	cmalsiB500
Lsi10G009100	CmoCh20G000030	Cucurbita moschata (Rifu)	cmolsiB484
Lsi10G009100	CmoCh02G011930	Cucurbita moschata (Rifu)	cmolsiB525
Lsi10G009100	Cla003120	Watermelon (97103) v1	lsiwmB078
Lsi10G009100	MELO3C014738	Melon (DHL92) v3.5.1	lsimeB072
Lsi10G009100	MELO3C031044.2	Melon (DHL92) v3.6.1	lsimedB074
Lsi10G009100	Cla97C02G050730	Watermelon (97103) v2	lsiwmbB052
Lsi10G009100	Bhi10G000409	Wax gourd	lsiwgoB079
Lsi10G009100	Cp4.1LG05g05780	Cucurbita pepo (Zucchini)	cpelsiB598

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi10G009100	Cucurbita maxima (Rimu)	cmalsiB086
Lsi10G009100	Cucumber (Chinese Long) v2	culsiB246
Lsi10G009100	Watermelon (Charleston Gray)	lsiwcgB054
Lsi10G009100	Cucumber (Gy14) v2	cgyblsiB235
Lsi10G009100	Silver-seed gourd	carlsiB458
Lsi10G009100	Cucumber (Chinese Long) v3	cuclsiB271