Lsi10G008790 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi10G008790
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr10 : 13079448 .. 13083229 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGTTCTTGTGTTGGTCTCACGCATCTCCTCAAGAGCAGAAGGCTTGCATTGAAAGGCAAGAACAATGAGAAAAATCTCATACATATAGGCTTTTTTTCTAAGTGGAATGTTATATGATGTTCATCAATAAGACTTTGTTCCTTCAATTATAGCAGCAAATTTAGAGGAGCTACTGCCAATCCCAATTCTTGTCTACAAGAAGACAAGGGATGTCACAAGAAGGTTTTCTTCTCAACCATGCTCGTACTTGGTGGGTTCTGGTTTTCTTCTTTTTTCTCTCTTCCCCCTTGCTCCCTCTTCAAACCCCATTACGAACTGTTTCTTTGATGCTCTCTTTTTTTCATTTAATATTTTTTTCCTTTTGTTGACTCTGTGATTTGCTTGAGATTTTTCTAGACTCTATAACTAATTAAATAGCGTGATTCTTATTTATTTGGACCTAATATGATTCTTTTAAATAGTATTTTTTTTTCTTTTGGAGACTAAGAACGAAATATTCTAGGTATGAATCAAGTTACCAAAAGGCTAAATAATCAAAGGCTTAGGTTGCACACTTGCAAAGTATAGTTGAATCACAACAGCCTACAGTTGAAGAACTATTAAGAAGATTAACAAGTCAAGGAGGTTCATCTAGCACAGACAAGAATCCAGAAGAATCTATTAAAAGGTAATATATAAAACTTTCTTCTTAAAACTCTACTTTATTCTGAAGTATTGGATTGGATTAGAACTCTTGCAGTTACGGTAGTCATAATTTAAAACTCTATTTACGTTGACTTGGTATCTCTGAATTACTTTAACTATCCTGCAGTTATGGTAGTCATAGATTAGTTACTGATATTAGATCTCATTTTCATGAATGTCCATTGGTTTTGTTACAAATTGTGATGTGTTGGAAATTTTACCATTCCTTCCTTTATGTGTAATGTGATCCTTGTTTAGATGTTTGTGTGTTTGATAGATTATGTTACAATGTAAGGAGTTGTTATTAGTCTTTTCTATTCATTTTGGTTTCTACTAAGTTATTTAGTTCATGAGTTTCATTAACTTGTTGAGTTTATTTCTTGAATTGAGTTTGTGCTGATTCTTGCTTGTTCAACGTCACTGTATAAACGAAATAGTGACAAATAATGTGTTGCTAAAAGTGCGCATTTAGTAACGCGTGCATGTCAGTAAAAGTACATTTTTAGCAGCACAAAATAAATGCGTCACTAAAACCTTTAGCTACGCGGATACAGTGGCACTCCTAGTGACACGGGTCTCCGCGTTGCTAATACTTTTAGTGGCGCTTTTTTACTTTTAGCAATGCATTTTATGCGCCACTGAAAGTGGTTTTTCTTGTAGTGGCAGCTCGAGTTTACCGACTCAATAAGCCTCCCATTTCAGAGGTAAAACCGGGTAGATAGCTGGGGACATAGTCCTACAAGACGGAATTTTCTCCTACTTGCTTCTAGGGTTAGTAGATAGGTTGTTCTCTTAAGTGCTGACTCTGGGACTTGAACAAGGGGCCCCACCCTTTCAATGGCCCAAGAGGGACTCAGTTTAGTGGTTGGACCATAAACCAATTGTTCATTAAAGGATCAGTGGGACTTAAGGAATAAGATGCAATTGTAGGGGTAAAACGGTAATTTTGACCCAACTGTAATTACGAACAACATGTGAAGGATCGACTTACTAATTATGGTTATATCAAGTGGACAAAAATATATCTACAGTGAGGAGAGTGCAGCTACAGACTTTAGTGGAGTGTCCTATTAGTTAACGAATGTTGGTTAATTAGGTTAAAAAGTTTGGTCGGTTAATCTCGGATCGTTGGAGCTCATGATCTGTAGGTCCATGAGGTCACTTTTAATTCTGACGAAAGAAGATAACTTTTCTTCTCTCTTTGTTTGATTTTATTGAAAAGTTAAGTTAATCCCCAAAAAGAAAAGAGGTTGATAATTACAAGGAAAGATAAAATAATGAAAGGACCAATATGCCCCTTTTATACAAGAAGATATCTATTAATACCCTTAATACTCCCCCTCAAGATGGAGAGTGAATGTCAATCACACCCATCTTGGACAACAAGGGAACAAAAACTTTAAAAGGTAAGGCCTTGGTAAAAATACTGGCAAGTTGTTGTTGAGTACGAATGGGAAGAAGCTTGACTAAAGCATTTGCAACCTTTTCTCGAATGAAATGGCAATCTAATTCAATATGCTTCGTGCGCTCATGAAACATCGAATTAGACGTTATATGAAGAGTTTCCTCATTATCACAAAAAATAAAAGCAGGAGATATAAAGGCAACATGTAACTCTTGAAGAAGATGAGATATCCAAATGAGTTCACAAGTAGTAGCAGCAAGAGCCCGATACTCAGCTTCAGCAGACGAACGAGAGACGGTAGTTTGCTTCTTAGCATTCCATGAGATAAGAGAATCACCCAGAAAAACACAGAAGCCAGTAATGGATTTACGATAATCCAAGCAAGAGGCCCAATCGGAATCGAAGTAGGCCTTGAGCTCAAAATCAGTAAACGGACGGAGGAGAATACCTTGACCAGGACAATTCTTCAAATAACGCAAGAGATGATGAACAGCATCAAGGTGACACTGACGAGGTTGAGAGACATATTGGTTAATCTTGTTTACAGCAAACACAATGTCAGGTCTAGAAATGGTGAGATATAAAAGCTTACCAATCAAACAACGATAGGCAATGGGATCAGGTAATGAGGTTCCCTCACCAATAGACAAGCGGAGATTGGGATCCATAGGGCAATGAACAGGCTTACAAGCCAACAAACCAGCTTCTTCAAGTAACTGAAGGACATAATGACGTTGAGAAAGAAAAATGTCGTGAGATGAACGGGCAAGCTCAAGCCCCAAGAAATATCGAAGGTCTCCAAGGTCCTTAAGTTGAAAAACACTGTTCAAATAAAGCTTAAGGGCATTAATGACCTCAGTAGAGGCACCTGTGATGATAATGTCATCAACATACACTAACAAAGCAACAAAGGTAGCACCAGATCCCCTAATAAAAAGAGAATAGTCAGACTTGGATTGTTTAAAACCAAGGAGGAAAAGGGCATTGGAGAACTTATCAAACCATTGGCGAGATGTCTGTTTAAGTCCATAGATAGACTTATGTAAGCAGCAAACAAGTTGCTCCCCCTTGGGTGTAGTAACATTGTGTTTGTAGCCAAGAGGTAAGTCCATGTAGACGTCCTTAAGGAGATCACCATGTAGAAAAGCATTATTCACATCAAGCTGTATCAAAGGCTATTGATAGGAGACTGCAAGGGTAAGGAGGACCTTAACACTAACCATTTTGCAACTGGTGAGAAAGTCTCAATATAATTGAGTCCTACTTGCTGTGTATACCCTTTGGCTACTAAACGAGCCTTATAGCGTTCAATGAGACCGTTAGAGTGATGCTTGATCTTATAAACCCATTTGCACCCAATGGAATGATGTCCTGTGGGAAGAGGGACAACAGACCAAGTTCAATTAGATTCCATGGTGGCCAATTCACATTCTATAGCTTGACGCCAATGAGAGAACTAAACAGCTTGATCATAGAACTGAGGCTCATAGGAAGCAGAAAGCTGTAGAATAAAACCACGATAAGGAGCAGAGGGGTGTGTGTAAGACAAGTAACTCTGGAAAGGATACTTAACTGATGTAGGAGAGGCTGAGCAAGGATTGGCAAACAACAAGTAATTACAATGATAGTCCTGCAAATAAGAAGGGGGGTGAGGGATTCGAGAGGAACAACGAGTTTCAACATCCATAG

mRNA sequence

ATGGTCAGCAAATTTAGAGGAGCTACTGCCAATCCCAATTCTTGTCTACAAGAAGACAAGGGATGTCACAAGAAGGTTTTCTTCTCAACCATGCTCGAGAGGCTGAGCAAGGATTGGCAAACAACAAGTAATTACAATGATAGTCCTGCAAATAAGAAGGGGGGTGAGGGATTCGAGAGGAACAACGAGTTTCAACATCCATAG

Coding sequence (CDS)

ATGGTCAGCAAATTTAGAGGAGCTACTGCCAATCCCAATTCTTGTCTACAAGAAGACAAGGGATGTCACAAGAAGGTTTTCTTCTCAACCATGCTCGAGAGGCTGAGCAAGGATTGGCAAACAACAAGTAATTACAATGATAGTCCTGCAAATAAGAAGGGGGGTGAGGGATTCGAGAGGAACAACGAGTTTCAACATCCATAG

Protein sequence

MVSKFRGATANPNSCLQEDKGCHKKVFFSTMLERLSKDWQTTSNYNDSPANKKGGEGFERNNEFQHP
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi10G008790.1Lsi10G008790.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi10G008790Silver-seed gourdcarlsiB025
Lsi10G008790Silver-seed gourdcarlsiB305
Lsi10G008790Silver-seed gourdcarlsiB583
Lsi10G008790Silver-seed gourdcarlsiB657
Lsi10G008790Silver-seed gourdcarlsiB794
Lsi10G008790Cucumber (Chinese Long) v3cuclsiB445
Lsi10G008790Cucumber (Chinese Long) v3cuclsiB522
Lsi10G008790Watermelon (97103) v2lsiwmbB045
Lsi10G008790Watermelon (97103) v2lsiwmbB060
Lsi10G008790Wax gourdlsiwgoB063
Lsi10G008790Wax gourdlsiwgoB081
Lsi10G008790Bottle gourd (USVL1VR-Ls)lsilsiB024
Lsi10G008790Cucumber (Gy14) v1cgylsiB020
Lsi10G008790Cucumber (Gy14) v1cgylsiB173
Lsi10G008790Cucumber (Gy14) v1cgylsiB235
Lsi10G008790Cucurbita maxima (Rimu)cmalsiB086
Lsi10G008790Cucurbita maxima (Rimu)cmalsiB468
Lsi10G008790Cucurbita maxima (Rimu)cmalsiB511
Lsi10G008790Cucurbita maxima (Rimu)cmalsiB550
Lsi10G008790Cucurbita moschata (Rifu)cmolsiB077
Lsi10G008790Cucurbita moschata (Rifu)cmolsiB453
Lsi10G008790Cucurbita moschata (Rifu)cmolsiB494
Lsi10G008790Cucurbita moschata (Rifu)cmolsiB535
Lsi10G008790Cucurbita pepo (Zucchini)cpelsiB196
Lsi10G008790Cucurbita pepo (Zucchini)cpelsiB224
Lsi10G008790Cucurbita pepo (Zucchini)cpelsiB521
Lsi10G008790Cucurbita pepo (Zucchini)cpelsiB592
Lsi10G008790Wild cucumber (PI 183967)cpilsiB421
Lsi10G008790Wild cucumber (PI 183967)cpilsiB500
Lsi10G008790Cucumber (Chinese Long) v2culsiB418
Lsi10G008790Cucumber (Chinese Long) v2culsiB490
Lsi10G008790Melon (DHL92) v3.5.1lsimeB048
Lsi10G008790Melon (DHL92) v3.5.1lsimeB066
Lsi10G008790Watermelon (Charleston Gray)lsiwcgB043
Lsi10G008790Watermelon (Charleston Gray)lsiwcgB046
Lsi10G008790Watermelon (Charleston Gray)lsiwcgB060
Lsi10G008790Watermelon (97103) v1lsiwmB061
Lsi10G008790Watermelon (97103) v1lsiwmB069
Lsi10G008790Watermelon (97103) v1lsiwmB075
Lsi10G008790Cucumber (Gy14) v2cgyblsiB457
Lsi10G008790Cucumber (Gy14) v2cgyblsiB383
Lsi10G008790Melon (DHL92) v3.6.1lsimedB050
Lsi10G008790Melon (DHL92) v3.6.1lsimedB062
Lsi10G008790Melon (DHL92) v3.6.1lsimedB070