Lsi10G008160 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi10G008160
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr10 : 11204951 .. 11210601 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATCCAGATCGATTGAATGAAGCACTGTTAGAGGTACAGAGAGATGTGAGAGCATTGCAGCAAAGGCTCCTAGAATCCTTGCAAAGAGACAAAAGAGAAGAAAGCAGACTAGCAGCCATCAAAGCAGAGAAGAAGAACCTGGTTCGAAAACTATCGGGTCGGGTACGAAGAGTGGCTGGAAGACGCCGATCTTATTCGAAGACACTTCCTGAAAGGCGAGAGAGAGTCCATCGATCGAACCAGAGGAGAGGAAGGAAAGGGGAGTTATCAGCAATGTTGAGGGCAAAAAAACAGAAGAAGAAGGATGAGCAACGATGCAGAGAGCGAGGTAAAACGCATTTGAATTATCCAAAGATATACAACATAGAGAACAAGAAGTCGTTGAGAAAAATAGTGAATCGAAGTGTTGACGTCGTATGGAAACGCACACGAAAGCGCCAAGGGGATACAAAAAGGGCCGGAGGGAGTCACCGCCGGAAATGGAAGAAGTATGGTAGAGGCAGATTTGTGACCTATTTGAGTTCAACGCTAGCTCTCGGAGAGGCTGAGTTTGCATCTCGCAAGACGAAGGCGGGATTTCCAAAAAACGGTCATCGACTATTATGGAGGAAACGATGGTGCAGTAGCTGCAAGAACCAAAAGAAGAGAAGAGAAAAGGACGAGGGAGACCGTTGTCAGCTGGGGTGAGGCCCATCCTCCTGCAAAATTAGAAAATGTGTTGGTTTTCAAGGATGGATTTCCGGCTTGGTGGTTATGTGACCCAGGACCCGACCGGATATGGTATTACAGCACCCATGGGAAGAAAGTAACCTAACGGCACAATATGTCAGTTGTGGCTCTTCACCCACGCTGTCGACCACCTTCACTGGGCTCGCCAATGTCGCTGACAAACGGTACCACCTGCCACCGATTGGGCCTCCACTACTTGCCAGCGTCGGCCGATTACAACTGACGGACCAACCATTTTCAATTGGTGCTGTGATGAATATTAAGTTCTGTGTCTTAGTTCTTAAGAGAAGAATGCTGAGAAAGATGGCGCCGGAAAATATAGAAGGAGGCGTGCTGATGGAGATGGAAATGACACCGGTGGATAGTGGGTCAGGACGGCAAAGAGGCCAACGGACGGAGAAACGACGGCTGAAATTAGCAGAAGGAGTCGACCCACAAAGTACGAAGAAGATAAATGGGAAAAGAGGAAATTTTCGTGAAAAGGAAGAGAAAGATTTTGATACCCACGTGAAATCTCAGAAGGTGGGGCCAGCCTCTGAAAATAAGTGGAGCATTAGTTCAGTGTGGGCTTTTGGGCTGAAATCACAGAAAAAGGTTGAGACCCATTATTTTGTGCCGATGCAAACTGTAGGGGAGAGTTGGAACATGCGAAAATGGGAGGGAAGAAAAATTCTAATTTACAAATGGTGTCAGGAAGTGGGACCATGGAGTGGTAATAGTGACAGCGTTACCCTGGATTAATTAATGAACTGGATTTGCATAAAAAGGCCCAGATTTTCTCAAAGGAACTTCCTTTATATGAGAAAGTTGGAGCCCAAATTGTATGTGAAGGTTGGGTTTGCATTAAATGGCTGGAAAAACAAACTGGAGGCTGGGAGCAGGATTGGCGAAAACAAGCATTATCAGGGATGAGTCCAACTAATTCTCTCCACGAGGAAAGGCAGCTGGGAGAAGAGTTCAGTAGACAGTGGGGCTGGAAGCTGCTTAAAGGGCTGATTACAATTTTGGTGGAGGAGGCCCATTATAATCTCTCAAAGGCAGAAAGTCTAATGATTTTACCTAAGGAATTGAAATCTCTAATGTGTGGATGGTGGGCCAGATGGGAGGTGCTAAAAACATGGGAAGTCAGCCACGTGAAAATTTTGGAAGAAAGTAGGGAGCTTAGTGGACTTAAATTTAATAAAAATACATTGAGGCCCAGTTGATAGAGTGGCAGAGAAGGGGCTTGAGTGGCTTGAAGCTCATAGGTATTTTTAAGGAAGATGGTGTACGGGCCCTAAAACGGGATTGGAATTGGAACAACAAGTGGATTATGGGCCTAGCCCATTAGAGAAGAAGAGCTTCAAATGCAAACACCAATGAAAAGGGTGGGGGAGTTGGGCCAGGGATCCGCAACTTGTTAACTCCGAGCATGTGTTGGGTAAGAGAAAGGAAGATTCAAGAGGTGGATGCCCAATTAGCTGGACGTCTGGTTTGGTCGTCTAGTTTAGTAGTTGCTCAATGAAAAAAATAAATAAAAAAAATGTTGCCCATTTTTGTAATAGTGCTTGGAACACACACCTTGAGGACAAGGTGTCTTAAAAGGGCGGGGTAATGTTAGGTAACTAAATAAGTTTATTAGTTTGATATTAATAAGGGGTATAAGGGTAATTAAATAGGAAGTTAGTTACTAAATATTGCTATAAATGGAAGGAGTGGGAGTGGTAGGAAGGTGTGAATAGTGATTTCTTAATTGGGGAATAGTAGGAGAGAGTAGCCGTTATGGTATATTGTAGTTTCTTTATTGATATTGCAATATAATTCTATCTTTGTTTGTTCTTTGGTGTTCTTGAGTTCTCTTGTTAGGAGGTATCCTAACATAATATTACCAATATTCTTGTATATTTCTTTTTTCTTTTCTTTTTCTTCCATACAAAGAATCATTCTAATTGTTTTTAATAAAACATATAAAAAACTACTCAAATTAAAGAGTTCATGGGTGGTGTTAAAAGGAAAAATGGAAGTAGATGATAAAATTTTATAGTATTAGGCACATACCACCTGCTGAAGACCAGATAGATAAATGGCAAGGGAACAGTGAGCCTGTCCAGGACACAGAGCCGCCATTGTTAGGTCCGTAATGCTCGGAATCACCACGACTGTCGACAAGCTCCCGATGAATGTCATCACGAAGAGATGCTTTAAACTCATCATCTTCTCCATCTCTCTTAAAAAGTTTTGAGAGCCCAACTCTATTGCTCTTACCTCTTAGTAGAAAAAACCAAAGCAACAACTCTTATATAAAAAGGTCAGGTCCTGACCCTTTTGGTCTTTGGAGAAATGGAAACTTGACTTCTTTTGGCCAACCGATCATATATACACACAAAAGGTAAAAGTGGTAATATATATATATATATATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTAAGATCTAGGTCACCGCATATCATTTCAGGTCCAGTTTTTATTGAAAAAATTTAAAGGATTTCTATTCCAATAGAATTGTTAAAACTTTTTATAAAAATCAAAGATGATATTGCAACTAAGTATACTTTTGCCATTTTTAAAAGTATATTAATATTTTTTTGAATAAATGAAAGACAAAGTTCAAGGTTTCTTTTTTATTATTAATTTTGTTGAGCGAACAATTATTAATATTATTATTATTATTTTGAAAAGATGAAAAATTTTCATTAAGAATAGAAAAGACATCCAACTAGGGTGATTAGCATCCCAACAAGCAACACAATTGTCCTCTTCGAAACAAGGAACCTGAAGATAAAAAAGATTAATAGTTATTTATGAAAGATCAACATTTGTATCGTTTAGAGCCTAAAGAATATTCGTCGAGTTTGATTCCACCAATAGAGGTTGACACGACTCTCCTCTCAACTGGAGAAGGGAAGACAAGGCAATCCGAATAACCTCTCCTTCCAACATCTTGAAAAGCTACGCTCTATCGAACCTCTTGAATCCAACACATATAGGAGATCCCTGAGAGTCACGAACAACTCAACCTATACTGCCAAAATTCCGAGGCATTTGTTTTATTCTAATTTACCATTGGTTTTAAGGGAGTCTTCTTCGTATATTTGGGTTGGATATATGTGTGTGTATTGTTTTCCTTGTGGGTAGGATCTAGAAGCGTAAGGCCTCACTGTCCACATACCACACGCTTCTGGTGCCACGTGAGAAAATCACACAAGAGACCCAAGTGTAGCCTCTAGAAGGACTAAGCCAAGGAAGTGTCATCGACCCATTGGTATAGGTCAAGCCAAGGGGCATATCCTCTCTATCTAATTTCCATGTTAGTTATGACCTTGATAGTAAAACAGTGAGGGAGAGTATAAATGGAAGGGATTCGGGATTCGTCTAA

mRNA sequence

ATGAATCCAGATCGATTGAATGAAGCACTGTTAGAGGTACAGAGAGATGTGAGAGCATTGCAGCAAAGGCTCCTAGAATCCTTGCAAAGAGACAAAAGAGAAGAAAGCAGACTAGCAGCCATCAAAGCAGAGAAGAAGAACCTGGTTCGAAAACTATCGGGTCGGGTACGAAGAGTGGCTGGAAGACGCCGATCTTATTCGAAGACACTTCCTGAAAGGCGAGAGAGAGTCCATCGATCGAACCAGAGGAGAGGAAGGAAAGGGGAGTTATCAGCAATGTTGAGGGCAAAAAAACAGAAGAAGAAGGATGAGCAACGATGCAGAGAGCGAGGTAAAACGCATTTGAATTATCCAAAGATATACAACATAGAGAACAAGAAGTCGTTGAGAAAAATAGTGAATCGAAGTGTTGACGTCGTATGGAAACGCACACGAAAGCGCCAAGGGGATACAAAAAGGGCCGGAGGGAGTCACCGCCGGAAATGGAAGAAGTATGGTAGAGGCAGATTTGTGACCTATTTGAGTTCAACGCTAGCTCTCGGAGAGGCTGAGTTTGCATCTCGCAAGACGAAGGCGGGATTTCCAAAAAACGGTCATCGACTATTATGGAGGAAACGATGGTGCAGTAGCTGCAAGAACCAAAAGAAGAGAAGAGAAAAGGACGAGGGAGACCGTTGTCAGCTGGGGACCCGACCGGATATGGTATTACAGCACCCATGGGAAGAAAGTAACCTAACGGCACAATATGTCAGTTGTGGCTCTTCACCCACGCTGTCGACCACCTTCACTGGGCTCGCCAATGTCGCTGACAAACGGTACCACCTGCCACCGATTGGGCCTCCACTACTTGCCAGCGTCGGCCGATTACAACTGACGGACCAACCATTTTCAATTGGTGCTGTGATGAATATTAAGTTCTGTGTCTTAGTTCTTAAGAGAAGAATGCTGAGAAAGATGGCGCCGGAAAATATAGAAGGAGGCGTGCTGATGGAGATGGAAATGACACCGGTGGATAGTGGGTCAGGACGGCAAAGAGGCCAACGGACGGAGAAACGACGGCTGAAATTAGCAGAAGGAGTCGACCCACAAAGTACGAAGAAGATAAATGGGAAAAGAGGAAATTTTCGTGAAAAGGAAGAGAAAGATTTTGATACCCACGTGAAATCTCAGAAGGTGGGGCCAGCCTCTGAAAATAAGTGGAGCATTAGTTCAGTGTGGGCTTTTGGGCTGAAATCACAGAAAAAGGTTGAGACCCATTATTTTGTGCCGATGCAAACTGCCCAGATTTTCTCAAAGGAACTTCCTTTATATGAGAAAGTTGGAGCCCAAATTGTATGTGAAGGTTGGGTTTGCATTAAATGGCTGGAAAAACAAACTGGAGGCTGGGAGCAGGATTGGCGAAAACAAGCATTATCAGGGATGAGTCCAACTAATTCTCTCCACGAGGAAAGGCAGCTGGGAGAAGAGTTCAGTAGACAGTGGGGCTGGAAGCTGCTTAAAGGGCTGATTACAATTTTGGTGGAGGAGGCCCATTATAATCTCTCAAAGGCAGAAAGTCTAATGATTTTACCTAAGGAATTGAAATCTCTAATGTGTGGATGGTGGGCCAGATGGGAGGTGCTAAAAACATGGGAATTGATAGAGTGGCAGAGAAGGGGCTTGAGTGGCTTGAAGCTCATAGGTATTTTTAAGGAAGATGGTGTCCGTAATGCTCGGAATCACCACGACTGTCGACAAGCTCCCGATGAATGATCTAGAAGCGTAAGGCCTCACTGTCCACATACCACACGCTTCTGGTGCCACGTCAAGCCAAGGGGCATATCCTCTCTATCTAATTTCCATGTTAGTTATGACCTTGATAGTAAAACAGTGAGGGAGAGTATAAATGGAAGGGATTCGGGATTCGTCTAA

Coding sequence (CDS)

ATGAATCCAGATCGATTGAATGAAGCACTGTTAGAGGTACAGAGAGATGTGAGAGCATTGCAGCAAAGGCTCCTAGAATCCTTGCAAAGAGACAAAAGAGAAGAAAGCAGACTAGCAGCCATCAAAGCAGAGAAGAAGAACCTGGTTCGAAAACTATCGGGTCGGGTACGAAGAGTGGCTGGAAGACGCCGATCTTATTCGAAGACACTTCCTGAAAGGCGAGAGAGAGTCCATCGATCGAACCAGAGGAGAGGAAGGAAAGGGGAGTTATCAGCAATGTTGAGGGCAAAAAAACAGAAGAAGAAGGATGAGCAACGATGCAGAGAGCGAGGTAAAACGCATTTGAATTATCCAAAGATATACAACATAGAGAACAAGAAGTCGTTGAGAAAAATAGTGAATCGAAGTGTTGACGTCGTATGGAAACGCACACGAAAGCGCCAAGGGGATACAAAAAGGGCCGGAGGGAGTCACCGCCGGAAATGGAAGAAGTATGGTAGAGGCAGATTTGTGACCTATTTGAGTTCAACGCTAGCTCTCGGAGAGGCTGAGTTTGCATCTCGCAAGACGAAGGCGGGATTTCCAAAAAACGGTCATCGACTATTATGGAGGAAACGATGGTGCAGTAGCTGCAAGAACCAAAAGAAGAGAAGAGAAAAGGACGAGGGAGACCGTTGTCAGCTGGGGACCCGACCGGATATGGTATTACAGCACCCATGGGAAGAAAGTAACCTAACGGCACAATATGTCAGTTGTGGCTCTTCACCCACGCTGTCGACCACCTTCACTGGGCTCGCCAATGTCGCTGACAAACGGTACCACCTGCCACCGATTGGGCCTCCACTACTTGCCAGCGTCGGCCGATTACAACTGACGGACCAACCATTTTCAATTGGTGCTGTGATGAATATTAAGTTCTGTGTCTTAGTTCTTAAGAGAAGAATGCTGAGAAAGATGGCGCCGGAAAATATAGAAGGAGGCGTGCTGATGGAGATGGAAATGACACCGGTGGATAGTGGGTCAGGACGGCAAAGAGGCCAACGGACGGAGAAACGACGGCTGAAATTAGCAGAAGGAGTCGACCCACAAAGTACGAAGAAGATAAATGGGAAAAGAGGAAATTTTCGTGAAAAGGAAGAGAAAGATTTTGATACCCACGTGAAATCTCAGAAGGTGGGGCCAGCCTCTGAAAATAAGTGGAGCATTAGTTCAGTGTGGGCTTTTGGGCTGAAATCACAGAAAAAGGTTGAGACCCATTATTTTGTGCCGATGCAAACTGCCCAGATTTTCTCAAAGGAACTTCCTTTATATGAGAAAGTTGGAGCCCAAATTGTATGTGAAGGTTGGGTTTGCATTAAATGGCTGGAAAAACAAACTGGAGGCTGGGAGCAGGATTGGCGAAAACAAGCATTATCAGGGATGAGTCCAACTAATTCTCTCCACGAGGAAAGGCAGCTGGGAGAAGAGTTCAGTAGACAGTGGGGCTGGAAGCTGCTTAAAGGGCTGATTACAATTTTGGTGGAGGAGGCCCATTATAATCTCTCAAAGGCAGAAAGTCTAATGATTTTACCTAAGGAATTGAAATCTCTAATGTGTGGATGGTGGGCCAGATGGGAGGTGCTAAAAACATGGGAATTGATAGAGTGGCAGAGAAGGGGCTTGAGTGGCTTGAAGCTCATAGGTATTTTTAAGGAAGATGGTGTCCGTAATGCTCGGAATCACCACGACTGTCGACAAGCTCCCGATGAATGA

Protein sequence

MNPDRLNEALLEVQRDVRALQQRLLESLQRDKREESRLAAIKAEKKNLVRKLSGRVRRVAGRRRSYSKTLPERRERVHRSNQRRGRKGELSAMLRAKKQKKKDEQRCRERGKTHLNYPKIYNIENKKSLRKIVNRSVDVVWKRTRKRQGDTKRAGGSHRRKWKKYGRGRFVTYLSSTLALGEAEFASRKTKAGFPKNGHRLLWRKRWCSSCKNQKKRREKDEGDRCQLGTRPDMVLQHPWEESNLTAQYVSCGSSPTLSTTFTGLANVADKRYHLPPIGPPLLASVGRLQLTDQPFSIGAVMNIKFCVLVLKRRMLRKMAPENIEGGVLMEMEMTPVDSGSGRQRGQRTEKRRLKLAEGVDPQSTKKINGKRGNFREKEEKDFDTHVKSQKVGPASENKWSISSVWAFGLKSQKKVETHYFVPMQTAQIFSKELPLYEKVGAQIVCEGWVCIKWLEKQTGGWEQDWRKQALSGMSPTNSLHEERQLGEEFSRQWGWKLLKGLITILVEEAHYNLSKAESLMILPKELKSLMCGWWARWEVLKTWELIEWQRRGLSGLKLIGIFKEDGVRNARNHHDCRQAPDE
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi10G008160.1Lsi10G008160.1mRNA


Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 10..30
scor

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None