Lsi10G007700 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi10G007700
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionAcyl-coenzyme A thioesterase 13
Locationchr10 : 10537639 .. 10539554 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAGAGAAAGGGACGCGTAGAGAAGCATAGTGATGATGATCGGAAGGTTGCTTCCGCCATGGACGACCTTCCTTTCAAATATTACCAGTTCTTTGTTATGACTGCTCTTCGCATTGATCTCATCCAACCTGGTCGCATCCTTTGCTCTCTCAAAGTCCCTGCTCGTTTGCTTGTATGCTTTTTCTCTCCTTCTCCTTCTACTTGTTTTTCGCGCAATTTCCACTCAATCCACCGTTCGTTCTTCTCTTACATCCACTTGCTAATGAGATTTCGATTTGCCTATTGATTTCTCTGTTTACTGCTTCATGTTTCATTATTAAGAACGAGAATAATTCCATGCGCGAAGGAGCCTCGGCTTTACTCGTCGATTGTTTAGGTCATGCAGCGGTAAAGACTTTGGGCCCTACCTCCACCGGAGTCTCCCTCGAAGTCAATCTCTCCTTCTTCGATGCTGCTTATCTCGACGTCAGTTCCACTTTCCCCTTTTTCTGTTTCTTTGATGTTCGTTACTTTACTGAGTTTCTAATTTTGTTTTTTTCCCCCCTTTAAATACTTATTACTGCTCCACCTATTTGTCAATCTAAATTTCAACTCCTTATTACGGAAGCTGTCTATTGATCAGATTCCTACCTGGTGATGTAACGAACAACACAATTTTTTTGCTTTAGTGATGTGAATTATGTAAAATTCCCCTCTCCCCTCACTCGATGGAAAGGGTGTACAAAATTAAAGTGGATTTTCATGATTTGTTATCTCGTAGAAAGCAATTCTTGGGGCTAATAATTGAAGAATTTTGAGTTATTTGGGTTTGAAGATTGGATTAGGCTGTCTGAGGAATTTACATGAAGCTGAAAGGTATGTAAGACTTAACTTTACGCTTGGATATTAGTTTGATTCCCATTTCCCAGACACTAATCGCTAATGAACTGAAAAATAGTTGTGTATTTGGACATTATTTTTAATAGTATTATTGGATTAAGAAGTCCCAGCCTTTAGACTTGAATGGATTTAATCATTCTTCCAAGTGAATGAAAGAGAACATGGGCACACTCACGCTCTATTGCTATTGCCAGAGAGTTGTCTGCAGTTCCTAGATCTAGGAATAACTATATTATGACAGGTAAAGAATTCCCTAGATTTTTGAAGAATCGTGTTCTTGGATTCTTAAGCTATTACACATAGCTAATCCACGAAAGGCGATGATTCTAGAGAAGTTGTAGAGGAAAAGAGATGATTACTATAGGAATTTAACCTGCAGGTGCAGGTGAACTTAGATGAGCATTGCTAACCTAAGTATCGGTTAATTTGTTAAGGCATTATTCCTCAACCAAATCGACATTGTATTGAAATTGGTAAATTAAGCATTGGTTAATAATTGGCATAATTCCTCAACAAAATATATATATATATATATATATATATATATATATATATATATATATATATATTTTTTTTCCCTGTGTTGGTAGTTAAATCTTCAATCTCTACAGAAGAAGTCATGCCAATTTCCATTGAGCTAAGCTCACTTTGGCTGGTAGGCCATATATTTTTTTTGTCTTGGCCTTAATACTTTCATTTGTTTTAAATAAAGCTAGCTTCTTTATGTACAAAAAAGAATTTAGTGATTTAGTTTGCACATCCACCATTGATGGTAAAGTGTGTTATGTTTCTTTGATTGCTTTTACATGGCTTCAGTCATTTCCTTGTATCCTTCCCAGTGAACCCATTCTCAAGTGTTTGTATACTACTTTCTGTCTGCTGTTTTAGGAGGACATTGAGATTGACAGCAAGGTTTTGCGAATGGGAAAGACCATTGCAGTAGTTAATGTTGAATTTAGGAAGAAAAGCAATGGTAAAATTATTGCTCAGGGTCGCCTCACCACATACCTACCCGTCTCGAGCAAGTTGTAG

mRNA sequence

ATGGAGAAGAGAAAGGGACGCGTAGAGAAGCATAGTGATGATGATCGGAAGGTTGCTTCCGCCATGGACGACCTTCCTTTCAAATATTACCAGTTCTTTGTTATGACTGCTCTTCGCATTGATCTCATCCAACCTGGTCGCATCCTTTGCTCTCTCAAAGTCCCTGCTCGTTTGCTTAACGAGAATAATTCCATGCGCGAAGGAGCCTCGGCTTTACTCGTCGATTGTTTAGGTCATGCAGCGGTAAAGACTTTGGGCCCTACCTCCACCGGAGTCTCCCTCGAAGTCAATCTCTCCTTCTTCGATGCTGCTTATCTCGACGAGGACATTGAGATTGACAGCAAGGTTTTGCGAATGGGAAAGACCATTGCAGTAGTTAATGTTGAATTTAGGAAGAAAAGCAATGGTAAAATTATTGCTCAGGGTCGCCTCACCACATACCTACCCGTCTCGAGCAAGTTGTAG

Coding sequence (CDS)

ATGGAGAAGAGAAAGGGACGCGTAGAGAAGCATAGTGATGATGATCGGAAGGTTGCTTCCGCCATGGACGACCTTCCTTTCAAATATTACCAGTTCTTTGTTATGACTGCTCTTCGCATTGATCTCATCCAACCTGGTCGCATCCTTTGCTCTCTCAAAGTCCCTGCTCGTTTGCTTAACGAGAATAATTCCATGCGCGAAGGAGCCTCGGCTTTACTCGTCGATTGTTTAGGTCATGCAGCGGTAAAGACTTTGGGCCCTACCTCCACCGGAGTCTCCCTCGAAGTCAATCTCTCCTTCTTCGATGCTGCTTATCTCGACGAGGACATTGAGATTGACAGCAAGGTTTTGCGAATGGGAAAGACCATTGCAGTAGTTAATGTTGAATTTAGGAAGAAAAGCAATGGTAAAATTATTGCTCAGGGTCGCCTCACCACATACCTACCCGTCTCGAGCAAGTTGTAG

Protein sequence

MEKRKGRVEKHSDDDRKVASAMDDLPFKYYQFFVMTALRIDLIQPGRILCSLKVPARLLNENNSMREGASALLVDCLGHAAVKTLGPTSTGVSLEVNLSFFDAAYLDEDIEIDSKVLRMGKTIAVVNVEFRKKSNGKIIAQGRLTTYLPVSSKL
Homology
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BLAST of Lsi10G007700 vs. Swiss-Prot
Match: ACO13_HUMAN (Acyl-coenzyme A thioesterase 13 OS=Homo sapiens GN=ACOT13 PE=1 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.5e-13
Identity = 39/104 (37.50%), Postives = 63/104 (60.58%), Query Frame = 1 

Query: 45  PGRILCSLKVPARLLNENNSMREGASALLVDCLGHAAVKTLGPTSTGVSLEVNLSFFDAA 104
           PG+++C +KV     N   ++  G +A LVD +   A+      + GVS+++N+++   A
Sbjct: 35  PGKVICEMKVEEEHTNAIGTLHGGLTATLVDNISTMALLCTERGAPGVSVDMNITYMSPA 94

Query: 105 YLDEDIEIDSKVLRMGKTIAVVNVEFRKKSNGKIIAQGRLTTYL 149
            L EDI I + VL+ GKT+A  +V+   K+ GK+IAQGR T +L
Sbjct: 95  KLGEDIVITAHVLKQGKTLAFTSVDLTNKATGKLIAQGRHTKHL 138

[Close]
BLAST of Lsi10G007700 vs. Swiss-Prot
Match: ACO13_PONAB (Acyl-coenzyme A thioesterase 13 OS=Pongo abelii GN=ACOT13 PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.5e-13
Identity = 39/104 (37.50%), Postives = 63/104 (60.58%), Query Frame = 1 

Query: 45  PGRILCSLKVPARLLNENNSMREGASALLVDCLGHAAVKTLGPTSTGVSLEVNLSFFDAA 104
           PG+++C +KV     N   ++  G +A LVD +   A+      + GVS+++N+++   A
Sbjct: 35  PGKVICEMKVEEEHTNAIGTLHGGLTATLVDNISTMALLCTERGAPGVSVDMNITYMSPA 94

Query: 105 YLDEDIEIDSKVLRMGKTIAVVNVEFRKKSNGKIIAQGRLTTYL 149
            L EDI I + VL+ GKT+A  +V+   K+ GK+IAQGR T +L
Sbjct: 95  KLGEDIVITAHVLKQGKTLAFTSVDLTNKATGKLIAQGRHTKHL 138

[Close]
BLAST of Lsi10G007700 vs. Swiss-Prot
Match: ACO13_MOUSE (Acyl-coenzyme A thioesterase 13 OS=Mus musculus GN=Acot13 PE=1 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.2e-12
Identity = 35/104 (33.65%), Postives = 64/104 (61.54%), Query Frame = 1 

Query: 45  PGRILCSLKVPARLLNENNSMREGASALLVDCLGHAAVKTLGPTSTGVSLEVNLSFFDAA 104
           P +++C +KV  +  N+  ++  G +A LVD +   A+      + GVS+++N+++   A
Sbjct: 35  PEKLICEMKVEEQHTNKLGTLHGGLTATLVDSISTMALMCTERGAPGVSVDMNITYMSPA 94

Query: 105 YLDEDIEIDSKVLRMGKTIAVVNVEFRKKSNGKIIAQGRLTTYL 149
            + E+I I + +L+ GKT+A  +V+   K+ GK+IAQGR T +L
Sbjct: 95  KIGEEIVITAHILKQGKTLAFASVDLTNKTTGKLIAQGRHTKHL 138

[Close]
BLAST of Lsi10G007700 vs. Swiss-Prot
Match: YLZ6_CAEEL (Putative esterase F42H10.6 OS=Caenorhabditis elegans GN=F42H10.6 PE=1 SV=2)

HSP 1 Score: 57.8 bits (138), Expect = 1.2e-07
Identity = 32/108 (29.63%), Postives = 61/108 (56.48%), Query Frame = 1 

Query: 43  IQPGRILCSLKVPARLLNENNSMREGASALLVDCLGHAAVKTLGPTSTGVSLEVNLSFFD 102
           +   +++C + V  + LN   ++  G +A L D +   AV          S+E+ +S+  
Sbjct: 49  VTKSKLVCEMVVQHQHLNSKGTLHGGQTATLTDVITARAVGVTVKDKGMASVELAVSYLL 108

Query: 103 AAYLDEDIEIDSKVLRMGKTIAVVNVEFRKKSNGKIIAQGRLT-TYLP 150
              + + +EI + VL++G+T+A  + EFR+KS+GK+ A+G+ T  +LP
Sbjct: 109 PVKVGDVLEITAHVLKVGRTMAFTDCEFRRKSDGKMSAKGKHTLAFLP 156

[Close]
BLAST of Lsi10G007700 vs. TrEMBL
Match: A0A0A0LQE5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G336730 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 1.4e-58
Identity = 116/141 (82.27%), Postives = 129/141 (91.49%), Query Frame = 1 

Query: 14  DDRKVASAMDDLPFKYYQFFVMTALRIDLIQPGRILCSLKVPARLLNENNSMREGASALL 73
           +D K+ SAMDDLPF+++QFFVM+ LRIDL+QPGRILCSLKVPARL+N+NNS+R GAS  L
Sbjct: 10  NDPKLGSAMDDLPFRFFQFFVMSTLRIDLLQPGRILCSLKVPARLINDNNSLRHGASVFL 69

Query: 74  VDCLGHAAVKTLGPTSTGVSLEVNLSFFDAAYLDEDIEIDSKVLRMGKTIAVVNVEFRKK 133
           VD LGHAAVKTLGP STGVSLEVN+SFFDAAYLDE+IEIDS VLR+GKTIAVVNVE RKK
Sbjct: 70  VDTLGHAAVKTLGPPSTGVSLEVNVSFFDAAYLDEEIEIDSNVLRLGKTIAVVNVEIRKK 129

Query: 134 SNGKIIAQGRLTTYLPVSSKL 155
           SNGKIIAQGRLT Y PVSSKL
Sbjct: 130 SNGKIIAQGRLTNYTPVSSKL 150

[Close]
BLAST of Lsi10G007700 vs. TrEMBL
Match: A0A0A0LMG1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G336710 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 9.1e-50
Identity = 106/153 (69.28%), Postives = 125/153 (81.70%), Query Frame = 1 

Query: 2   EKRKGRVEKHSDDDRKVASAMDDLPFKYYQFFVMTALRIDLIQPGRILCSLKVPARLLNE 61
           EK KG +EKH DD    AS +D LP ++Y+ F++T +R+ LIQPGRILCSLKVPARLLNE
Sbjct: 3   EKTKGYLEKHGDD----ASTIDLLPSRFYENFILTGIRVLLIQPGRILCSLKVPARLLNE 62

Query: 62  NNSMREGASALLVDCLGHAAVKTLGPTSTGVSLEVNLSFFDAAYLDEDIEIDSKVLRMGK 121
           NNS+  GASA LVDC+G AA+ TLG  +TGVSLE+++S+ DAAYLDE+IEIDSKVLRMGK
Sbjct: 63  NNSLHGGASASLVDCIGSAALATLGAITTGVSLEISVSYLDAAYLDEEIEIDSKVLRMGK 122

Query: 122 TIAVVNVEFRKKSNGKIIAQGRLTTYLPVSSKL 155
           TI VVNVE R+K NGKIIAQGR T YL  SSKL
Sbjct: 123 TIGVVNVELRRKGNGKIIAQGRHTKYLAFSSKL 151

[Close]
BLAST of Lsi10G007700 vs. TrEMBL
Match: A0A067JW66_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25867 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 2.9e-40
Identity = 86/154 (55.84%), Postives = 119/154 (77.27%), Query Frame = 1 

Query: 1   MEKRKGRVEKHSDDDRKVASAMDDLPFKYYQFFVMTALRIDLIQPGRILCSLKVPARLLN 60
           +EK K  +EK  +DD K  SA++++P ++++ FVM  +R+DLI+PGR++CS+KVP RLLN
Sbjct: 3   LEKVKRFLEK--EDDGKNRSAIEEMPLRFFERFVMQGIRVDLIEPGRLVCSMKVPPRLLN 62

Query: 61  ENNSMREGASALLVDCLGHAAVKTLGPTSTGVSLEVNLSFFDAAYLDEDIEIDSKVLRMG 120
             N +  GA+A LVD +G A + T+G   TGVS+E+N+S+ DAAY DE+IEID++VLR+G
Sbjct: 63  AGNFLHGGATATLVDLVGSAVIYTVGAPFTGVSVEINVSYLDAAYADEEIEIDARVLRVG 122

Query: 121 KTIAVVNVEFRKKSNGKIIAQGRLTTYLPVSSKL 155
           K + VV+VEFRKK  GKIIAQGR T YL VSSK+
Sbjct: 123 KAVGVVSVEFRKKETGKIIAQGRHTKYLAVSSKM 154

[Close]
BLAST of Lsi10G007700 vs. TrEMBL
Match: V4SLE0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026677mg PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.0e-37
Identity = 83/155 (53.55%), Postives = 115/155 (74.19%), Query Frame = 1 

Query: 1   MEKRKGRVEKHSD-DDRKVASAMDDLPFKYYQFFVMTALRIDLIQPGRILCSLKVPARLL 60
           +E  K  +EK    DD K  S M+++P K+++ F+M  LR+DL +PGR++CS+KVP RLL
Sbjct: 3   LESVKRYLEKGGGGDDDKNKSTMEEMPTKFFERFIMQGLRVDLSEPGRVICSMKVPPRLL 62

Query: 61  NENNSMREGASALLVDCLGHAAVKTLGPTSTGVSLEVNLSFFDAAYLDEDIEIDSKVLRM 120
           N  N M  GA+A LVD +G AA+ T+G  S GVS+E+N+S+ DAA+  E+IEI++KVLR+
Sbjct: 63  NAGNFMHGGATATLVDLVGSAAIFTVGAPSVGVSVEINVSYLDAAFGGEEIEIEAKVLRV 122

Query: 121 GKTIAVVNVEFRKKSNGKIIAQGRLTTYLPVSSKL 155
           GK +AVV+VE RKK  GKI+AQGR T YL +SSK+
Sbjct: 123 GKAVAVVSVELRKKDTGKIVAQGRHTKYLAISSKM 157

[Close]
BLAST of Lsi10G007700 vs. TrEMBL
Match: A0A067EY20_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031596mg PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.0e-37
Identity = 83/155 (53.55%), Postives = 115/155 (74.19%), Query Frame = 1 

Query: 1   MEKRKGRVEKHSD-DDRKVASAMDDLPFKYYQFFVMTALRIDLIQPGRILCSLKVPARLL 60
           +E  K  +EK    DD K  S M+++P K+++ F+M  LR+DL +PGR++CS+KVP RLL
Sbjct: 3   LESVKRYLEKGGGGDDDKNKSTMEEMPTKFFERFIMQGLRVDLSEPGRVICSMKVPPRLL 62

Query: 61  NENNSMREGASALLVDCLGHAAVKTLGPTSTGVSLEVNLSFFDAAYLDEDIEIDSKVLRM 120
           N  N M  GA+A LVD +G AA+ T+G  S GVS+E+N+S+ DAA+  E+IEI++KVLR+
Sbjct: 63  NAGNFMHGGATATLVDLVGSAAIFTVGAPSVGVSVEINVSYLDAAFGGEEIEIEAKVLRV 122

Query: 121 GKTIAVVNVEFRKKSNGKIIAQGRLTTYLPVSSKL 155
           GK +AVV+VE RKK  GKI+AQGR T YL +SSK+
Sbjct: 123 GKAVAVVSVELRKKDTGKIVAQGRHTKYLAISSKM 157

[Close]
BLAST of Lsi10G007700 vs. TAIR10
Match: AT1G04290.1 (AT1G04290.1 Thioesterase superfamily protein)

HSP 1 Score: 148.7 bits (374), Expect = 3.0e-36
Identity = 74/143 (51.75%), Postives = 101/143 (70.63%), Query Frame = 1 

Query: 13  DDDRKVASAM-DDLPFKYYQFFVMTALRIDLIQPGRILCSLKVPARLLNENNSMREGASA 72
           D+D K    M   LP ++ + FV   L++DLI+PGRI+CS+K+P  LLN    +  GA+A
Sbjct: 13  DEDEKAKEPMVAKLPHRFLERFVTNGLKVDLIEPGRIVCSMKIPPHLLNAGKFLHGGATA 72

Query: 73  LLVDCLGHAAVKTLGPTSTGVSLEVNLSFFDAAYLDEDIEIDSKVLRMGKTIAVVNVEFR 132
            LVD +G A + T G + +GVS+E+N+S+ DAA+LDE+IEI+SK LR+GK +AVV+VE R
Sbjct: 73  TLVDLIGSAVIYTAGASHSGVSVEINVSYLDAAFLDEEIEIESKALRVGKAVAVVSVELR 132

Query: 133 KKSNGKIIAQGRLTTYLPVSSKL 155
           KK+ GKIIAQGR T Y    S L
Sbjct: 133 KKTTGKIIAQGRHTKYFAPRSNL 155

[Close]
BLAST of Lsi10G007700 vs. TAIR10
Match: AT2G29590.1 (AT2G29590.1 Thioesterase superfamily protein)

HSP 1 Score: 73.9 bits (180), Expect = 9.4e-14
Identity = 45/126 (35.71%), Postives = 73/126 (57.94%), Query Frame = 1 

Query: 29  YYQFFVMTALRIDLIQPGRILCSLKVPARLLNENNSMREGASALLVDCLGHAAVKTLGPT 88
           +Y+ F +  +R++ ++PG I CS KVP RL + + ++  GA A LVD +G A V   G  
Sbjct: 34  FYENFSLRGIRVNRVEPGFISCSFKVPLRLTDRDKNLANGAIANLVDEVGGALVHGEG-L 93

Query: 89  STGVSLEVNLSFFDAAYLDEDIEIDSKVLRMGKTIAVVNVEFRKKSNGKIIAQGRLTTYL 148
              VS++++++F   A L E++EI S++L          V  R K  G+IIA+GR + + 
Sbjct: 94  PMSVSVDMSIAFLSKAKLGEELEITSRLLGERGGYKGTIVVVRNKMTGEIIAEGRHSMFG 153

Query: 149 PVSSKL 155
             +SKL
Sbjct: 154 RQASKL 158

[Close]
BLAST of Lsi10G007700 vs. TAIR10
Match: AT3G16175.1 (AT3G16175.1 Thioesterase superfamily protein)

HSP 1 Score: 57.8 bits (138), Expect = 7.0e-09
Identity = 31/115 (26.96%), Postives = 63/115 (54.78%), Query Frame = 1 

Query: 30  YQFFVMTALRIDLIQPGRILCSLKVPARLLNENNSMREGASALLVDCLGHAAVKTLGPTS 89
           ++  ++  L +  +  G + C L V   ++ E+ S   G    ++D +G +AV + G   
Sbjct: 25  FEILILKGLELIHVGKGILRCKLLVTDHVVGEDGSWNAGVITAVMDSIGASAVYSSGG-G 84

Query: 90  TGVSLEVNLSFFDAAYLDEDIEIDSKVLRMGKTIAVVNVEFRKKSNGKIIAQGRL 145
             +S+++N SF+  A + E +EI+++V      +    +E R++++G+IIA GRL
Sbjct: 85  LHISVDLNSSFYSTAKIHETVEIEARVNGSNGGLKSAVIEIRRETSGEIIATGRL 138

[Close]
BLAST of Lsi10G007700 vs. TAIR10
Match: AT3G61200.1 (AT3G61200.1 Thioesterase superfamily protein)

HSP 1 Score: 54.3 bits (129), Expect = 7.7e-08
Identity = 37/136 (27.21%), Postives = 64/136 (47.06%), Query Frame = 1 

Query: 20  SAMDDLPFKYYQFFVMTALRIDLIQPGRILCSLKVPARLLNENNSMREGASALLVDCLGH 79
           S  D   F  +        R   I  GR+ CS+ V   + N    +  GA A + + +  
Sbjct: 53  SCNDFTSFDSFSVLFQNNTRALSIARGRVSCSVTVTPGISNFFKGLHGGAVASIAERVAM 112

Query: 80  AAVKTLGPTSTGVSL-EVNLSFFDAAYLDEDIEIDSKVLRMGKTIAVVNVEFRKKSNGKI 139
           A VKT+      + + E+++S+  +A +  ++ ++  V+R G+ ++VV VEF+ K   K+
Sbjct: 113 ACVKTVVSEDKHLFIGELSMSYLSSAPISSELLVEGTVVRTGRNLSVVTVEFKIKETMKV 172

Query: 140 IAQGRLTTYLPVSSKL 155
               R T Y    SKL
Sbjct: 173 TYLSRATFYHSPISKL 188

[Close]
BLAST of Lsi10G007700 vs. NCBI nr
Match: gi|659121858|ref|XP_008460848.1| (PREDICTED: acyl-coenzyme A thioesterase 13-like [Cucumis melo])

HSP 1 Score: 253.4 bits (646), Expect = 2.5e-64
Identity = 131/154 (85.06%), Postives = 142/154 (92.21%), Query Frame = 1 

Query: 1   MEKRKGRVEKHSDDDRKVASAMDDLPFKYYQFFVMTALRIDLIQPGRILCSLKVPARLLN 60
           M K KG V    D+D KV S MDDLPFK++QFFVMTALRIDL+QPGR+LCSLKVPARLLN
Sbjct: 1   MGKTKGIV----DNDPKVGSPMDDLPFKFFQFFVMTALRIDLLQPGRVLCSLKVPARLLN 60

Query: 61  ENNSMREGASALLVDCLGHAAVKTLGPTSTGVSLEVNLSFFDAAYLDEDIEIDSKVLRMG 120
           +NNSMR+GASALLVDCLGHAAVKTL P+STGVSLEVN+SFFDAAYLDE+IEIDS VLRMG
Sbjct: 61  DNNSMRQGASALLVDCLGHAAVKTLTPSSTGVSLEVNVSFFDAAYLDEEIEIDSNVLRMG 120

Query: 121 KTIAVVNVEFRKKSNGKIIAQGRLTTYLPVSSKL 155
           KTIAVVNVEFRKKSNGKIIAQGRLTTY+PVSSKL
Sbjct: 121 KTIAVVNVEFRKKSNGKIIAQGRLTTYVPVSSKL 150

[Close]
BLAST of Lsi10G007700 vs. NCBI nr
Match: gi|449459208|ref|XP_004147338.1| (PREDICTED: putative esterase F42H10.6 [Cucumis sativus])

HSP 1 Score: 233.8 bits (595), Expect = 2.0e-58
Identity = 116/141 (82.27%), Postives = 129/141 (91.49%), Query Frame = 1 

Query: 14  DDRKVASAMDDLPFKYYQFFVMTALRIDLIQPGRILCSLKVPARLLNENNSMREGASALL 73
           +D K+ SAMDDLPF+++QFFVM+ LRIDL+QPGRILCSLKVPARL+N+NNS+R GAS  L
Sbjct: 10  NDPKLGSAMDDLPFRFFQFFVMSTLRIDLLQPGRILCSLKVPARLINDNNSLRHGASVFL 69

Query: 74  VDCLGHAAVKTLGPTSTGVSLEVNLSFFDAAYLDEDIEIDSKVLRMGKTIAVVNVEFRKK 133
           VD LGHAAVKTLGP STGVSLEVN+SFFDAAYLDE+IEIDS VLR+GKTIAVVNVE RKK
Sbjct: 70  VDTLGHAAVKTLGPPSTGVSLEVNVSFFDAAYLDEEIEIDSNVLRLGKTIAVVNVEIRKK 129

Query: 134 SNGKIIAQGRLTTYLPVSSKL 155
           SNGKIIAQGRLT Y PVSSKL
Sbjct: 130 SNGKIIAQGRLTNYTPVSSKL 150

[Close]
BLAST of Lsi10G007700 vs. NCBI nr
Match: gi|659121860|ref|XP_008460849.1| (PREDICTED: acyl-coenzyme A thioesterase 13 [Cucumis melo])

HSP 1 Score: 219.5 bits (558), Expect = 3.9e-54
Identity = 114/154 (74.03%), Postives = 131/154 (85.06%), Query Frame = 1 

Query: 1   MEKRKGRVEKHSDDDRKVASAMDDLPFKYYQFFVMTALRIDLIQPGRILCSLKVPARLLN 60
           MEK K  +EK  DD    ASA+D LPF++Y+ F+MT +R+DLIQPGRILCSLKVPARLLN
Sbjct: 1   MEKTKRYLEKLGDD----ASAIDVLPFRFYENFIMTGIRVDLIQPGRILCSLKVPARLLN 60

Query: 61  ENNSMREGASALLVDCLGHAAVKTLGPTSTGVSLEVNLSFFDAAYLDEDIEIDSKVLRMG 120
           ENNS+  GASA LVDC+G AA+KTLG T+TGVSLE+NLS+ DAAYLDE+IEIDSKVLRMG
Sbjct: 61  ENNSLHGGASASLVDCIGSAALKTLGATTTGVSLEINLSYLDAAYLDEEIEIDSKVLRMG 120

Query: 121 KTIAVVNVEFRKKSNGKIIAQGRLTTYLPVSSKL 155
           KTIAV+NVE R+KSNGKIIAQGR T YL  SSKL
Sbjct: 121 KTIAVINVELRRKSNGKIIAQGRHTKYLAFSSKL 150

[Close]
BLAST of Lsi10G007700 vs. NCBI nr
Match: gi|449459206|ref|XP_004147337.1| (PREDICTED: acyl-coenzyme A thioesterase 13 [Cucumis sativus])

HSP 1 Score: 204.5 bits (519), Expect = 1.3e-49
Identity = 106/153 (69.28%), Postives = 125/153 (81.70%), Query Frame = 1 

Query: 2   EKRKGRVEKHSDDDRKVASAMDDLPFKYYQFFVMTALRIDLIQPGRILCSLKVPARLLNE 61
           EK KG +EKH DD    AS +D LP ++Y+ F++T +R+ LIQPGRILCSLKVPARLLNE
Sbjct: 3   EKTKGYLEKHGDD----ASTIDLLPSRFYENFILTGIRVLLIQPGRILCSLKVPARLLNE 62

Query: 62  NNSMREGASALLVDCLGHAAVKTLGPTSTGVSLEVNLSFFDAAYLDEDIEIDSKVLRMGK 121
           NNS+  GASA LVDC+G AA+ TLG  +TGVSLE+++S+ DAAYLDE+IEIDSKVLRMGK
Sbjct: 63  NNSLHGGASASLVDCIGSAALATLGAITTGVSLEISVSYLDAAYLDEEIEIDSKVLRMGK 122

Query: 122 TIAVVNVEFRKKSNGKIIAQGRLTTYLPVSSKL 155
           TI VVNVE R+K NGKIIAQGR T YL  SSKL
Sbjct: 123 TIGVVNVELRRKGNGKIIAQGRHTKYLAFSSKL 151

[Close]
BLAST of Lsi10G007700 vs. NCBI nr
Match: gi|802752943|ref|XP_012088374.1| (PREDICTED: acyl-coenzyme A thioesterase 13 [Jatropha curcas])

HSP 1 Score: 172.9 bits (437), Expect = 4.2e-40
Identity = 86/154 (55.84%), Postives = 119/154 (77.27%), Query Frame = 1 

Query: 1   MEKRKGRVEKHSDDDRKVASAMDDLPFKYYQFFVMTALRIDLIQPGRILCSLKVPARLLN 60
           +EK K  +EK  +DD K  SA++++P ++++ FVM  +R+DLI+PGR++CS+KVP RLLN
Sbjct: 3   LEKVKRFLEK--EDDGKNRSAIEEMPLRFFERFVMQGIRVDLIEPGRLVCSMKVPPRLLN 62

Query: 61  ENNSMREGASALLVDCLGHAAVKTLGPTSTGVSLEVNLSFFDAAYLDEDIEIDSKVLRMG 120
             N +  GA+A LVD +G A + T+G   TGVS+E+N+S+ DAAY DE+IEID++VLR+G
Sbjct: 63  AGNFLHGGATATLVDLVGSAVIYTVGAPFTGVSVEINVSYLDAAYADEEIEIDARVLRVG 122

Query: 121 KTIAVVNVEFRKKSNGKIIAQGRLTTYLPVSSKL 155
           K + VV+VEFRKK  GKIIAQGR T YL VSSK+
Sbjct: 123 KAVGVVSVEFRKKETGKIIAQGRHTKYLAVSSKM 154

The following BLAST results are available for this feature:
BLAST of Lsi10G007700 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ACO13_HUMAN1.5e-1337.50Acyl-coenzyme A thioesterase 13 OS=Homo sapiens GN=ACOT13 PE=1 SV=1[more]
ACO13_PONAB1.5e-1337.50Acyl-coenzyme A thioesterase 13 OS=Pongo abelii GN=ACOT13 PE=2 SV=1[more]
ACO13_MOUSE2.2e-1233.65Acyl-coenzyme A thioesterase 13 OS=Mus musculus GN=Acot13 PE=1 SV=1[more]
YLZ6_CAEEL1.2e-0729.63Putative esterase F42H10.6 OS=Caenorhabditis elegans GN=F42H10.6 PE=1 SV=2[more]
BLAST of Lsi10G007700 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LQE5_CUCSA1.4e-5882.27Uncharacterized protein OS=Cucumis sativus GN=Csa_2G336730 PE=4 SV=1[more]
A0A0A0LMG1_CUCSA9.1e-5069.28Uncharacterized protein OS=Cucumis sativus GN=Csa_2G336710 PE=4 SV=1[more]
A0A067JW66_JATCU2.9e-4055.84Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25867 PE=4 SV=1[more]
V4SLE0_9ROSI1.0e-3753.55Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026677mg PE=4 SV=1[more]
A0A067EY20_CITSI1.0e-3753.55Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031596mg PE=4 SV=1[more]
BLAST of Lsi10G007700 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G04290.13.0e-3651.75 Thioesterase superfamily protein[more]
AT2G29590.19.4e-1435.71 Thioesterase superfamily protein[more]
AT3G16175.17.0e-0926.96 Thioesterase superfamily protein[more]
AT3G61200.17.7e-0827.21 Thioesterase superfamily protein[more]
BLAST of Lsi10G007700 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659121858|ref|XP_008460848.1|2.5e-6485.06PREDICTED: acyl-coenzyme A thioesterase 13-like [Cucumis melo][more]
gi|449459208|ref|XP_004147338.1|2.0e-5882.27PREDICTED: putative esterase F42H10.6 [Cucumis sativus][more]
gi|659121860|ref|XP_008460849.1|3.9e-5474.03PREDICTED: acyl-coenzyme A thioesterase 13 [Cucumis melo][more]
gi|449459206|ref|XP_004147337.1|1.3e-4969.28PREDICTED: acyl-coenzyme A thioesterase 13 [Cucumis sativus][more]
gi|802752943|ref|XP_012088374.1|4.2e-4055.84PREDICTED: acyl-coenzyme A thioesterase 13 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006683Thioestr_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi10G007700.1Lsi10G007700.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006683Thioesterase domainPFAMPF030614HBTcoord: 68..137
score: 3.
NoneNo IPR availablePANTHERPTHR21660THIOESTERASE SUPERFAMILY MEMBER-RELATEDcoord: 8..154
score: 4.3
NoneNo IPR availablePANTHERPTHR21660:SF6F19P19.27 PROTEINcoord: 8..154
score: 4.3

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi10G007700Cucumber (Chinese Long) v3cuclsiB106
Lsi10G007700Watermelon (97103) v2lsiwmbB053
Lsi10G007700Wax gourdlsiwgoB071
Lsi10G007700Cucumber (Gy14) v1cgylsiB373
Lsi10G007700Cucurbita maxima (Rimu)cmalsiB508
Lsi10G007700Cucurbita maxima (Rimu)cmalsiB557
Lsi10G007700Cucurbita moschata (Rifu)cmolsiB492
Lsi10G007700Cucurbita pepo (Zucchini)cpelsiB222
Lsi10G007700Cucurbita pepo (Zucchini)cpelsiB597
Lsi10G007700Wild cucumber (PI 183967)cpilsiB093
Lsi10G007700Cucumber (Chinese Long) v2culsiB095
Lsi10G007700Melon (DHL92) v3.5.1lsimeB056
Lsi10G007700Watermelon (Charleston Gray)lsiwcgB056
Lsi10G007700Watermelon (97103) v1lsiwmB066
Lsi10G007700Cucumber (Gy14) v2cgyblsiB086
Lsi10G007700Melon (DHL92) v3.6.1lsimedB058
Lsi10G007700Silver-seed gourdcarlsiB656