Lsi10G007500 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi10G007500
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionMADS-box transcription factor family protein, putative
Locationchr10 : 10337886 .. 10345004 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTAAGGGTTTTTGTTAAATCTTCAACAACAAATTTATCGTTAGATTGGAGTTTTTAGAGGCTTTCGTGTCCGACAAGAAACCTATTCGGTCTATACCTCAGCCGCACCACCGCCATAGTACCGCCGTGAACTGTGAGTTTTAAATATGATTTGAATTTAATTATTTTTATATAATTTTAAATTCAATTTAATTAACATTAAGAAGATAAGAAAATTAAAAATTTTAGGTGATGGGAAGAGGAAAATTGAGCATGAAACTGATCAGTAATGAGAAATCTCGAAAGACGACGTTTTATAAGCGGAAAGCAAGTTTGTTGCGAAAAGCTTATGAGCTGTCTACACTGTGCGATGTTCGTGCTTGTGTCTTTGTCTATGGCCCTAACCAAAATGACCAATCTACCCTCCAACTTCACACGTGGCCCTCGTGTCGGGAACACGTCAACGAAATGATCGCTTCTTACAAGGCTAACTGTCTCCATAAACGTGCTCGCAAGGCTTTCGGTCTCTTCGACTTCTTCTCCGAGAGGAAGAAGAAGATTGAAGCTGACGTGTCCAAGCTTCGCAAGGATGTTGCTGAAGCCAGGTAATAATTAATGACATGTTTAATTTCCACTAATTAATTATGTTTATGTAATATCTCCAACAATAGATGTAAAATTGACATTTTATAAATGATGATAATTTTATTCTATGATTTCGATGTTGGAAAAATGCATCTCTTTTGACAAAAAGTTTCGTACCTTAACGTAAATTTCGAAAAGTTGGGCATGATGTCAAACCAATATCATAGACATATGATGACATGAGATTTGATGTTAGTTAGTAACTGTTATGGTAGGTAACTGTTATTGTACCTATATGATGTTGGATGTTTTTATGGGTAGTTATAGTCAATTCGTCATTGTATCCTTTGTTGACATGTTAGACGATGACAGTTTGTGTAATTGGTCATTATATATATATGTGATGATGTCAGTTTAAAACTAACATGATCTAAAGCTAAATTTGTTGTAGTGATATTGTTAATATTAATAATCAGGTTTTCAAAGTGGGATGAACGTCTAGACCATCTATTAGAAGATCAATTACGAGTTTTAATGGTAGAATTGGATTCGAAGCTCGAGATGACGAAGAGAAGGATCGAGATGGTGGGGGAGAATAATGTCGAAGAGGGGATGTCGATGGAGAGTAACCAAACCCTAAATGCAAATATGAAGAAGAAAGAAGTAATGACATTTGATCAAGGTGAGGAAAGTTATGGGATGTTTGGAAGGTCATCAATGGAACAAACACAAACCATAATGCCATTCCATCATCAATATCATCATCAACTTCAAACAATGGCACAAAGTCTTCAAATGGATCATGAGATTGAGAATTTGTCTCAATTCTTATTTGGGGCAAATGGGTCATCATCACAAATTCAATTAAGTTATGGAAATAATAATTGTTTCCAAAACTACCCTCATAATTTTTACAATGATCCAACAATAAATGGAATGGTTATGGACAACACACAAAGTTACTCGATGTGCCATTATGGACTTCCTCTTACAACACAATCAGTTCTCCCGCTATCATACATGCAAATGCAACTCACAGATGATCAAATGATGATGGCTTATACTTCAAATTCTCAAATGGCTTTGCCCAATAATGCTTCTACTCAAGTGAATGACCAATTTGATTACTTCAATTATGAGTATTTTATGAAGCCTAACAACATCTAAGCTCATTAATTAGTTCGAGGCTTTGAAGTAGAATTCATTTATATGATTGTTTGTTCATCACTAATTTAGCTTTAAGTTGTGGATGTTGGTCTTACTACCTTTATGGTTTTGGATATCATTTAATTTCTCTCAATTAATTTTCTTTTGGTTGGAAAAGGTTGGATTTTTGGGCTTTTCTAAGCCTATGTTGTAGTAACTTTTTACATGTGCAAAATGAAAATGGAAATCATTATATTTCTCCCAATTAATTATCTAATCAAATGATAAAAGTACATTTTTATCTACCTACTTTACTACATTTGGTATAGCAATGAATAAACGCTACAAAAAAAATTTAGTTGCCAAATGAGACTCTTTTCAAATATAGCAAAATCAGTCAACTTATCTACAAATATAGTAAAATAAAAATGTCTATCAATGATAGACTACCACTACAACAAAATATACATTTGATGACACTTGAATAGTAGCACATTTTGATAGGAGAGAGAAAAAACAGTCATTAAAGCTAATTTCACGCGTTTTTGGCGGGAAAAAATGGAGTTTTTCGGATTTTTTGAAATTAATGACTGTTTTTTTGTGACACTAATTCATGACACTAAATAATAGTCATTAAATGTAGGAATATGAAAAAGGCGCGATTTTGGCGGGAAAAGACGGAAAATTTCGGAATTCTCGACTATTATGACAGTTTTTTTGTGTCACCAATTTATGACGAGAATTAACTGTCACTAAAAAGTGACGGTTTTTTAGAGTAATTAAATTGAAACAAAAAAAAGGCGGTTTTAGCAAAAAAAAAAAAAAAAAAAAAAAGAGAATTTTGGATTTTTAGAATTTTATGACCATTTTTTTAGTGTCATGAATATAGAACTTGAGTTAATTATCATTAAAGAGCATATTCATTGAATCTAATTCGAGTCCTATATTGATGACACTAAAAAACAATAAAACAAATTTAACAATCCAAAATTCTCATGATAGGCTAATTAATTTTGAGTTCGAAAAATATTATTAGTGGTTAGTAAATTTTAATTTTAATACTAAATTTGTGTAATTTAATTATAGGAACCAAGATAGATTAGGGATTATGCTCATTTCGGATCAAAGAAATTATATGCGTGGGCAAAAAATTTTAATATCTACCAACACAAACTCTATGGGCATAAATCCTTAAGCCTAACAAACTATGTGGGCCCATAGTTTAGTCTTAAGCCCACATTTTAGTCTTAAGCCCAATTTTGATTTTTTCCCAAATTTTATTTTCCCCCTTCACTTTAGCTTTCCCTCCAACAAACCCCCCTCTCACGATTTCCCTCATCCTCTCCCTCTCACTCACAATCTTCATCTTCCTCTCCCTATCCCTCTCACAGCAGTTCGCGCAGAACATTTCTCCAGCAGTTTCGTCGCACAGCAGTGGTTCGCCGCCGCTGTCGCACAGCAGCAGTCCACCGCCGACGTCGCACAGCAGCAGTCCGCTGCCGCCGTCGCACAGCAGAAGTTCGCCGCCGCCGTCGCACAGCAGAAGTCCGCCGGCCCCGTCGCACAGCAGCAGTTCGCCGCCGTCGTCGCACAGCAGATCCTCCGCCGCCGCAGTCGCACAGTAGATCCTCTGCCATCGCCGCCGCACAGCAGCTTCCGAAAGTCGCTGTTGTTTTCAGTAAGGTGAAGCTGCCTTTTGATTAGCAAATTCTATGTCTAGATCATTGTTTCATTAACAAATTTTGGTTTAAAAATCTTATTTTTTTTCCCTTTTGATTTACTTATGTTGTCATGGCGTTTCTCAGAGGAAAGTAGAGACAAGGTTACTCTTTTGGTATCTAAAGTTAACATAGAAATTGCTTGGTTCTGGTGGTTTTGGTCATTGAAAAATTCTCTTTTTTGATTCTGATTTAGGTCCATTTTTCAAGTTTCTTCAGTTTATAATTATACAGTTATGGATTTTTTAAATTTGTTTATAACACTTGGGTGTTCTTTGTTTGTAGTTTAGACTTGATTGAAGGAGTTTAAAGTGAGGTTTACGGTTGCTTTGAGTAAGTTTGCTCATTTCGAACACTATTTGAGTTTTCAAATGAGGCTTCTAACTAAGTTCTTACCTTAAAACCTTGTTTTTATTGTTAAAAGACTTTTTTTAGTTAGTTTAGAAGTGCTTTAAATTGCATTTAGTAAGTGAATTTCTATTTGAAGAGTTTGTTTGTCATTTGATAATATGTTGTTGGTATATTTGTCTCATTCAAAGATTAGTTTAAAATGTTTCTTTGAGTGGAAAGTTCATGATTAATCATTGACATTGTTTTCTTTATGAGCTGGAACATTCATAATAACTAAATTTGTGTAAATGTCACATGAACCCTCTGTTGTAAGTTAGAATTTGTTCAAGATACATACCTTAATAAATAATCTAGAACATTTGCTTCTACTTGGTGCAACCTCTATAATGTCTTTTGTTTGTGCATATTGCCACCAATTGGGAATCTTTCAAGTTGGTTATTTGTAGCAAGTGGGTGGATTTGCACAAGTATTGCATCTATCTATGACTCTATGGCTTCGATCACTCTATTTTTCCTTTCATCAATGTTGTATTGACATGTATATTTGAATCCACTACTATGTGATTGTCATTAAGATACATCTACAACTTTACTGTCATAATTTGGGGTATTATGGTTGGTGTTTTTCTCATCTATTCTCTAATTTGTGAATTTGTTGTACTTTTGATAGGTTGTCATTGGTTGTTTAAGAGTTTTGTGTAAGAAACTTGTGTTAAATTTGGCTTCAATAATGTAAAACAGGGGTTGGAAGTGTGAAGAGAGTTGGCAATTGTGCTGGAAAAGAATAAGCTTGGCGACGTTGTTTTTGTAAGTGAAACCTTAGCTTTACACTCTGAAATGAAAGAACTTAAACATGGGTAAATTTATGTTTGAGGTGGACATGCATATATCACCAAACGGACAATTATCCACTTTTTTAACATTTTAGGTTGTTTGATAGTCGAAGCAACACTTATGAAATTTTTTGAAACTTTCTTCATTTTCTTTGAATTGTAGACAATTATTTATTTGTGGGTATGAGAAGTCCTATCAGAAACTTCTTTATTAGTTTTCCTTCACAAGATTTTTGGGTATGGTCTCTGAATTCTTTGCATATATCAGCAAAGTTTTATGGCAAAAGACTAGTGATTTTAAGTTGATGATTATATATTTGTTGTAGTTGCATGTTACTTAAAAACCTAATTGAAAATTAGTGTAACTTAGTATCAAATAATACATGTTTATATTTATTTTTTTGACTTGGTTGGGTGAAAAAATTTAGGAAACACCAACTCTGACTTATGTTTCTTCTTCTTAGCAACAAGGTCTTCACCTAGGCTTCATCCGCTTACTTTTCAGCTCACACTTACTTTGAACCAGGTTTATGTCTTTGACTTCTTCATTTTTTGTCAACATATCATTAAAATGCATCAAGATATATAGATAAACTGTTTCAATGCTCACTCACATTCATATTCATCTGTTCCAAGTTTTGAAATTTTTTAACCAAATTACACGTGTACAATGTTCTTTTTATCAGGTTTCTTTTGGGGGAGGGGAGATTTGACAATAATTTAATTCTCTAATTTTCTGCAATGGACAAATCATGGATGATGAAAAACAGATTATCTAGAGAATATGAGTTGGGAGTTGAAACATTCATTGAATTTGNATAATTTGTAGGAATCATTGGACATTGATCATTATTGATCAATCAAAAAGCAGCGTATTTTGGATGGACCCTTTAAAAAATCGACTTGACCAAGATATCATCGATGTGATTGGCATGTACGTATGTTACATATAGAATTTCACAACTTTAGTTAATGTGAATATAGAAAGTAGAAAGACATTATATATTTGAAATCATTCACAGGTCTTTCAAGAGTGTGAAAAAGAAGAAGCTTACTTGGAAATCAATCAAAGTATATTATTTCGTAAACAACAAAATTTAGTGAGTTTATTTAATAAATATGTTCTTATTTAAGTAGCCTATGTTTTGTATTTTATACACACATGCAGTGTCCTAAGCAATCGGGGGTGGTTGAATGTGGATATTATGTCATGCGATATATGCGTGAGATAATATTACAACGAACCACGCCAATTTTAGAAATAGTACGTATTCAAATTTGAACCGATTTAACTAGGATTTTTAGTTCATGTGGCTTATTCGTTTTCTTTGTTTATAGATGAAAGACGTACCACCAAAATACTCACAAGATGATATTGATGTAGTGCAAAGTGAGTGGGCAGAGTATGTGGGATCACACATATTCTTTGCATAGGATTTGTGCCAACATTGGTAATGGGATCATGCGGAAAACAAACTATTGTGGATGAATTACTCCTATTTTGTTGCTCAATCTAGATTGGAATGCATTTTGCAAAGGACTTTTTGTGGGGTCCGTAAGAATGACTTTAGATGATATGGTCCACAAGAATGCATTAGGTGTCGTCGTTTTTGAGGTACTGTAAGATTCTTATTTATTTGATCTATTCTACATCTTCCATGTTTTTTGTAAGAGTAATATTGTTATTTGCAACATGTTTTGTATTATATACTTTTTCCACTAACAATTTTATATGTTGGCTTCAATTTCTTGTTTGGACAAGGTTGGTAGTGGACACTTGATATTGCCTATGGCATTTTGAAAATGTTTGTTAGTAAAGAGGTAAAGATGAGCGTGTTGATTTCATTCTATATTTAACATGATTTTATTGCTCCTTAGGATACACGTTTAATCTTACTCTCTTATATTTTATGATTGTCCACAGTTGGTCTTTGAAATATTCGAGAAAGATGTTATGTGGAAAGAATACGCTCACGTAAGAAGTTTTGAAGTTGGAGTGTCTTTGGTGACTAAGAGGTATATCATATAACTTAGAATTATATTGTTATTTGAATTGGTTTATTTTGGTAAGACCTAAGTTATTTTGCTAATGATGAAAATATCTTTCAAATATTGGTTGACATTATTTTATTTTGGTAGACTTAATTTATTATGATATTGATGGAAATTTCTTTCAAGTAGTTATTGGTATACTTATGTTCTAAATAGTGAGACTGTTGTGCGTATTCAGATTACTTATTACATTAAATAAATCTTCTTATACCTCAAGCATATAGTTTTTCATGTGAAACCCCTCAAACCCCATCTTTACGTAGTTTTTCATTTTACTTTATTCTTTCTAATAGAGATATTTGTGGACATTTGTACTTTTTGGAAGTAAGTTCAAACATATGTTTTGAAGATAGTTGATGTTGATTGTTTGTTTTATTTTGATTTCTTTAGTTATTATATTCTTAAAGTTAGACGAGTTGTTATACTTCTTAGAGGTTGGACAAGTTTATTAG

mRNA sequence

ATGGAGGCTTTCGTGTCCGACAAGAAACCTATTCGGTCTATACCTCAGCCGCACCACCGCCATAGTACCGCCGTGATGGGAAGAGGAAAATTGAGCATGAAACTGATCAGTAATGAGAAATCTCGAAAGACGACGTTTTATAAGCGGAAAGCAAGTTTGTTGCGAAAAGCTTATGAGCTGTCTACACTGTGCGATGTTCGTGCTTGTGTCTTTGTCTATGGCCCTAACCAAAATGACCAATCTACCCTCCAACTTCACACGTGGCCCTCGTGTCGGGAACACGTCAACGAAATGATCGCTTCTTACAAGGCTAACTGTCTCCATAAACGTGCTCGCAAGGCTTTCGGTCTCTTCGACTTCTTCTCCGAGAGGAAGAAGAAGATTGAAGCTGACGTGTCCAAGCTTCGCAAGGATGTTGCTGAAGCCAGCTTTCCCTCCAACAAACCCCCCTCTCACGATTTCCCTCATCCTCTCCCTCTCACTCACAATCTTCATCTTCCTCTCCCTATCCCTCTCACAGCAGTTCGCGCAGAACATTTCTCCAGCAGTTTCGTCGCACAGCAGTGGTTCGCCGCCGCTGTCGCACAGCAGCAGTCCACCGCCGACGTCGCACAGCAGCAGTCCGCTGCCGCCGTCGCACAGCAGAAGTTCGCCGCCGCCGTCGCACAGCAGAAGTCCGCCGGCCCCGTCGCACAGCAGCAGTTCGCCGCCGTCGTCGCACAGCAGATCCTCCGCCGCCGCAGTCGCACAGTAGATCCTCTGCCATCGCCGCCGCACAGCAGCTTCCGAAAGTCGCTGTTGTTTTCAGTAAGGTCTTTCAAGAGTGTGAAAAAGAAGAAGCTTACTTGGAAATCAATCAAATTGGTCTTTGAAATATTCGAGAAAGATGTTATGTGGAAAGAATACGCTCACTTAGACGAGTTGTTATACTTCTTAGAGGTTGGACAAGTTTATTAG

Coding sequence (CDS)

ATGGAGGCTTTCGTGTCCGACAAGAAACCTATTCGGTCTATACCTCAGCCGCACCACCGCCATAGTACCGCCGTGATGGGAAGAGGAAAATTGAGCATGAAACTGATCAGTAATGAGAAATCTCGAAAGACGACGTTTTATAAGCGGAAAGCAAGTTTGTTGCGAAAAGCTTATGAGCTGTCTACACTGTGCGATGTTCGTGCTTGTGTCTTTGTCTATGGCCCTAACCAAAATGACCAATCTACCCTCCAACTTCACACGTGGCCCTCGTGTCGGGAACACGTCAACGAAATGATCGCTTCTTACAAGGCTAACTGTCTCCATAAACGTGCTCGCAAGGCTTTCGGTCTCTTCGACTTCTTCTCCGAGAGGAAGAAGAAGATTGAAGCTGACGTGTCCAAGCTTCGCAAGGATGTTGCTGAAGCCAGCTTTCCCTCCAACAAACCCCCCTCTCACGATTTCCCTCATCCTCTCCCTCTCACTCACAATCTTCATCTTCCTCTCCCTATCCCTCTCACAGCAGTTCGCGCAGAACATTTCTCCAGCAGTTTCGTCGCACAGCAGTGGTTCGCCGCCGCTGTCGCACAGCAGCAGTCCACCGCCGACGTCGCACAGCAGCAGTCCGCTGCCGCCGTCGCACAGCAGAAGTTCGCCGCCGCCGTCGCACAGCAGAAGTCCGCCGGCCCCGTCGCACAGCAGCAGTTCGCCGCCGTCGTCGCACAGCAGATCCTCCGCCGCCGCAGTCGCACAGTAGATCCTCTGCCATCGCCGCCGCACAGCAGCTTCCGAAAGTCGCTGTTGTTTTCAGTAAGGTCTTTCAAGAGTGTGAAAAAGAAGAAGCTTACTTGGAAATCAATCAAATTGGTCTTTGAAATATTCGAGAAAGATGTTATGTGGAAAGAATACGCTCACTTAGACGAGTTGTTATACTTCTTAGAGGTTGGACAAGTTTATTAG

Protein sequence

MEAFVSDKKPIRSIPQPHHRHSTAVMGRGKLSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRACVFVYGPNQNDQSTLQLHTWPSCREHVNEMIASYKANCLHKRARKAFGLFDFFSERKKKIEADVSKLRKDVAEASFPSNKPPSHDFPHPLPLTHNLHLPLPIPLTAVRAEHFSSSFVAQQWFAAAVAQQQSTADVAQQQSAAAVAQQKFAAAVAQQKSAGPVAQQQFAAVVAQQILRRRSRTVDPLPSPPHSSFRKSLLFSVRSFKSVKKKKLTWKSIKLVFEIFEKDVMWKEYAHLDELLYFLEVGQVY
BLAST of Lsi10G007500 vs. Swiss-Prot
Match: PHE2_ARATH (MADS-box transcription factor PHERES 2 OS=Arabidopsis thaliana GN=PHE2 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 3.6e-09
Identity = 40/109 (36.70%), Postives = 56/109 (51.38%), Query Frame = 1

Query: 30  KLSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRACVFVYGPNQNDQSTLQLHTWP 89
           K+ + LI N  SRKTTF KRK  + +K  EL TLC V AC  VY P  +         WP
Sbjct: 4   KMKLSLIENSVSRKTTFTKRKKGMTKKLTELVTLCGVEACAVVYSPFNSIP-----EAWP 63

Query: 90  SCREHVNEMIASYKANCLHKRARKAFGLFDFFSERKKKIEADVSKLRKD 139
           S RE V ++++ +    +  R +K      F S+R  K +  + KLR +
Sbjct: 64  S-REGVEDVVSKFMELSVLDRTKKMVDQETFISQRIAKEKEQLQKLRDE 106

BLAST of Lsi10G007500 vs. Swiss-Prot
Match: AGL80_ARATH (Agamous-like MADS-box protein AGL80 OS=Arabidopsis thaliana GN=AGL80 PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 4.7e-09
Identity = 38/116 (32.76%), Postives = 57/116 (49.14%), Query Frame = 1

Query: 26  MGRGKLSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRACVFVYGPNQNDQSTLQL 85
           M R K+ +  ISN+ SRK TF KRK  L++K +ELSTLC + AC  +Y P   +      
Sbjct: 1   MTRKKVKLAYISNDSSRKATFKKRKKGLMKKVHELSTLCGITACAIIYSPYDTNP----- 60

Query: 86  HTWPSCREHVNEMIASYKANCLHKRARKAFGLFDFFSERKKKIEADVSKLRKDVAE 142
             WPS    V  +++ ++      + +K      F  +R  K    + + RKD  E
Sbjct: 61  EVWPS-NSGVQRVVSEFRTLPEMDQHKKMVDQEGFLKQRIAKATETLRRQRKDSRE 110

BLAST of Lsi10G007500 vs. Swiss-Prot
Match: AGL82_ARATH (Agamous-like MADS-box protein AGL82 OS=Arabidopsis thaliana GN=AGL82 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.0e-08
Identity = 32/74 (43.24%), Postives = 44/74 (59.46%), Query Frame = 1

Query: 31  LSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRACVFVYGPNQ-NDQSTLQLHTWP 90
           + ++ I+N+K+R TT+ KRKASL +KA E STLC V  C+ VYGP +  D    +   WP
Sbjct: 6   VDLQRIANDKTRITTYKKRKASLYKKAQEFSTLCGVETCLIVYGPTKATDVVISEPEIWP 65

Query: 91  SCREHVNEMIASYK 104
                V  +I  YK
Sbjct: 66  KDETKVRAIIRKYK 79

BLAST of Lsi10G007500 vs. Swiss-Prot
Match: PHE1_ARATH (MADS-box transcription factor PHERES 1 OS=Arabidopsis thaliana GN=PHE1 PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.4e-08
Identity = 40/111 (36.04%), Postives = 56/111 (50.45%), Query Frame = 1

Query: 28  RGKLSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRACVFVYGPNQNDQSTLQLHT 87
           RGK+ +  I N+  RKTTF KRK  +L+K  EL TLC V AC  +  P  + Q       
Sbjct: 2   RGKMKLSFIENDSVRKTTFTKRKKGMLKKFNELVTLCGVDACAVIRSPYNSIQ-----EP 61

Query: 88  WPSCREHVNEMIASYKANCLHKRARKAFGLFDFFSERKKKIEADVSKLRKD 139
           WPS RE V E+++ +    +  R +K      F  +R  K    + KLR +
Sbjct: 62  WPS-REGVEEVMSKFMEFSVLDRTKKMVDQETFLRQRIAKETERLQKLRDE 106

BLAST of Lsi10G007500 vs. Swiss-Prot
Match: AGL90_ARATH (Agamous-like MADS-box protein AGL90 OS=Arabidopsis thaliana GN=AGL90 PE=1 SV=2)

HSP 1 Score: 59.3 bits (142), Expect = 8.8e-08
Identity = 38/112 (33.93%), Postives = 56/112 (50.00%), Query Frame = 1

Query: 30  KLSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRACVFVYGPNQNDQSTLQLHTWP 89
           K+ + LI+NE+SRKT+F KRK  + +K +ELSTLC V+AC  +Y P           +WP
Sbjct: 3   KVKLSLIANERSRKTSFMKRKNGIFKKLHELSTLCGVQACALIYSP-----FIPVPESWP 62

Query: 90  SCREHVNEMIASYKANCLHKRARKAFGLFDFFSERKKKIEADVSKLRKDVAE 142
           S RE   ++ + +       R RK         ER  K +  +  L  +  E
Sbjct: 63  S-REGAKKVASKFLEMPRTARTRKMMDQETHLMERITKAKEQLKNLAAENRE 108

BLAST of Lsi10G007500 vs. TrEMBL
Match: A0A0A0LME6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G336070 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.3e-47
Identity = 99/122 (81.15%), Postives = 107/122 (87.70%), Query Frame = 1

Query: 26  MGRGKLSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRACVFVYGPNQ-NDQSTLQ 85
           MGRGKLSMKLISNEKSRKTTF+KRKASLLRKAYELSTLCDVR CV V+GPNQ NDQS LQ
Sbjct: 1   MGRGKLSMKLISNEKSRKTTFHKRKASLLRKAYELSTLCDVRVCVVVHGPNQSNDQSPLQ 60

Query: 86  LHTWPSCREHVNEMIASYKANCLHKRARKAFGLFDFFSERKKKIEADVSKLRKDVAEASF 145
           LHTWP   + VN MIASYK NCL+KR RK+FGL DFFSERKKK+E D+SKLRKDV+E  F
Sbjct: 61  LHTWPPSADEVNNMIASYKTNCLYKRVRKSFGLIDFFSERKKKVETDMSKLRKDVSEERF 120

Query: 146 PS 147
           PS
Sbjct: 121 PS 122

BLAST of Lsi10G007500 vs. TrEMBL
Match: M5XI05_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa027181mg PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 2.9e-26
Identity = 57/121 (47.11%), Postives = 86/121 (71.07%), Query Frame = 1

Query: 26  MGRGKLSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRACVFVYGPNQNDQSTLQL 85
           MGRG+L M+LI+NE++RKTTF KR+  +++KAYE STLC++  C+ +YGP Q D+   +L
Sbjct: 1   MGRGRLKMELIANERARKTTFQKRRKGMMKKAYEFSTLCELDVCMIIYGPKQTDRPP-EL 60

Query: 86  HTWPSCREHVNEMIASYKANCLHKRARKAFGLFDFFSERKKKIEADVSKLRKDVAEASFP 145
           HTWP  R+ V+ +I  YKA+ + K A+K F L D   +RK K+  D+ + RK++ EA +P
Sbjct: 61  HTWPENRDEVDRIINKYKASIMRKPAKKTFDLSDLLRDRKTKVHVDIYRARKEMYEAKYP 120

Query: 146 S 147
           +
Sbjct: 121 T 120

BLAST of Lsi10G007500 vs. TrEMBL
Match: M5X3X5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021970mg PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 4.2e-25
Identity = 58/121 (47.93%), Postives = 83/121 (68.60%), Query Frame = 1

Query: 26  MGRGKLSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRACVFVYGPNQNDQSTLQL 85
           MGRG+L M+LI+NE+SRKTTF KR   +++KAYE STLC+V  C+ +YGP   D+   +L
Sbjct: 1   MGRGRLKMELIANERSRKTTFQKRSKGMMKKAYEFSTLCEVDVCIIIYGPKLTDRPP-EL 60

Query: 86  HTWPSCREHVNEMIASYKANCLHKRARKAFGLFDFFSERKKKIEADVSKLRKDVAEASFP 145
            TWP   E V+ +I  YKA+ + K A+K F L D   +RK K+ AD+ + RK++ EA +P
Sbjct: 61  QTWPQNSEQVDRIINKYKASTMSKPAKKTFDLSDLLMDRKNKVYADIYRARKEMYEAKYP 120

Query: 146 S 147
           +
Sbjct: 121 T 120

BLAST of Lsi10G007500 vs. TrEMBL
Match: W9SQ48_9ROSA (MADS-box transcription factor PHERES 1 OS=Morus notabilis GN=L484_027089 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 5.7e-22
Identity = 59/128 (46.09%), Postives = 79/128 (61.72%), Query Frame = 1

Query: 26  MGRGKLSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRACVFVYGP-------NQN 85
           MGRGKL ++ I NEK RKTTF KRK  +L+KA E S LC +  C+F+ GP       N N
Sbjct: 1   MGRGKLKLEFIRNEKVRKTTFLKRKKGILKKANEFSILCGIDICLFISGPKLDGDIGNNN 60

Query: 86  DQSTLQLHTWPSCREHVNEMIASYKANCLHKRARKAFGLFDFFSERKKKIEADVSKLRKD 145
            + + +  TWP  R  V  +I  Y+A  L K  +K  GL D F ERK+KIEA++S+ RK 
Sbjct: 61  SRPSPEFETWPPERTKVMSIINKYQATILRKPPKKVHGLKDTFVERKRKIEAEISRCRKK 120

Query: 146 VAEASFPS 147
           + EA +P+
Sbjct: 121 LCEAKYPT 128

BLAST of Lsi10G007500 vs. TrEMBL
Match: A0A068TNU9_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00015001001 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 2.4e-20
Identity = 56/128 (43.75%), Postives = 82/128 (64.06%), Query Frame = 1

Query: 26  MGRGKLSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRACVFVYGPNQNDQSTLQL 85
           MGR KL+M+LI  EKSR  TF KRK  L+RK +E +TLCDV AC+ +YGP Q + ++++ 
Sbjct: 1   MGRAKLNMELIGKEKSRHITFKKRKEGLMRKIHEFATLCDVDACMIIYGPKQ-ESASMES 60

Query: 86  HTWPSCREHVNEMIASYKANCLHKRARKAFGLFDFFSERKKKIEADVSKLRKDVAEASFP 145
             WP   + ++ MI +Y+       A + FGL DFF +R K++E ++ K+RK  AE  +P
Sbjct: 61  GIWPENSDEISRMIDTYQGKS-KDSATRVFGLQDFFQDRNKRVEDELDKVRKKAAEIQYP 120

Query: 146 S-NKPPSH 153
           +   P SH
Sbjct: 121 TWIDPMSH 126

BLAST of Lsi10G007500 vs. TAIR10
Match: AT5G55690.1 (AT5G55690.1 MADS-box transcription factor family protein)

HSP 1 Score: 70.5 bits (171), Expect = 2.1e-12
Identity = 39/105 (37.14%), Postives = 58/105 (55.24%), Query Frame = 1

Query: 26  MGRGKLSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRACVFVYGPNQ-NDQSTLQ 85
           MGR  + M  I+NEK+R TT+ KRKA L +KA E STLC V  CV VYGP++  D+  ++
Sbjct: 1   MGRKMVKMTRITNEKTRITTYKKRKACLYKKASEFSTLCGVDTCVIVYGPSRAGDEMVME 60

Query: 86  LHTWPSCREHVNEMIASYKANCLHKRARKAFGLFDFFSERKKKIE 130
              WP     V E++  Y+ +       K + + +   +   K+E
Sbjct: 61  PELWPKDGSKVREILTKYR-DTASSSCTKTYTVQECLEKNNTKVE 104

BLAST of Lsi10G007500 vs. TAIR10
Match: AT1G65300.1 (AT1G65300.1 AGAMOUS-like 38)

HSP 1 Score: 63.9 bits (154), Expect = 2.0e-10
Identity = 40/109 (36.70%), Postives = 56/109 (51.38%), Query Frame = 1

Query: 30  KLSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRACVFVYGPNQNDQSTLQLHTWP 89
           K+ + LI N  SRKTTF KRK  + +K  EL TLC V AC  VY P  +         WP
Sbjct: 4   KMKLSLIENSVSRKTTFTKRKKGMTKKLTELVTLCGVEACAVVYSPFNSIP-----EAWP 63

Query: 90  SCREHVNEMIASYKANCLHKRARKAFGLFDFFSERKKKIEADVSKLRKD 139
           S RE V ++++ +    +  R +K      F S+R  K +  + KLR +
Sbjct: 64  S-REGVEDVVSKFMELSVLDRTKKMVDQETFISQRIAKEKEQLQKLRDE 106

BLAST of Lsi10G007500 vs. TAIR10
Match: AT5G26630.1 (AT5G26630.1 MADS-box transcription factor family protein)

HSP 1 Score: 63.5 bits (153), Expect = 2.6e-10
Identity = 42/116 (36.21%), Postives = 57/116 (49.14%), Query Frame = 1

Query: 26  MGRGKLSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRACVFVYGPNQNDQSTLQL 85
           M R K+ M  I NE +RK+TF KRK  LL+KA EL  LC V     V  P +     L  
Sbjct: 1   MTRQKVKMTFIENETARKSTFKKRKKGLLKKAQELGILCGVPIFAVVNSPYE-----LNP 60

Query: 86  HTWPSCREHVNEMIASYKANCLHKRARKAFGLFDFFSERKKKIEADVSKLRKDVAE 142
             WPS RE  N++++ +K   +  + +K      F  +R  K      KLRK+  E
Sbjct: 61  EVWPS-REAANQVVSQWKTMSVMDKTKKMVNQETFLQQRITKATESWKKLRKENKE 110

BLAST of Lsi10G007500 vs. TAIR10
Match: AT5G48670.1 (AT5G48670.1 AGAMOUS-like 80)

HSP 1 Score: 63.5 bits (153), Expect = 2.6e-10
Identity = 38/116 (32.76%), Postives = 57/116 (49.14%), Query Frame = 1

Query: 26  MGRGKLSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRACVFVYGPNQNDQSTLQL 85
           M R K+ +  ISN+ SRK TF KRK  L++K +ELSTLC + AC  +Y P   +      
Sbjct: 1   MTRKKVKLAYISNDSSRKATFKKRKKGLMKKVHELSTLCGITACAIIYSPYDTNP----- 60

Query: 86  HTWPSCREHVNEMIASYKANCLHKRARKAFGLFDFFSERKKKIEADVSKLRKDVAE 142
             WPS    V  +++ ++      + +K      F  +R  K    + + RKD  E
Sbjct: 61  EVWPS-NSGVQRVVSEFRTLPEMDQHKKMVDQEGFLKQRIAKATETLRRQRKDSRE 110

BLAST of Lsi10G007500 vs. TAIR10
Match: AT5G58890.1 (AT5G58890.1 AGAMOUS-like 82)

HSP 1 Score: 62.4 bits (150), Expect = 5.9e-10
Identity = 32/74 (43.24%), Postives = 44/74 (59.46%), Query Frame = 1

Query: 31  LSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRACVFVYGPNQ-NDQSTLQLHTWP 90
           + ++ I+N+K+R TT+ KRKASL +KA E STLC V  C+ VYGP +  D    +   WP
Sbjct: 6   VDLQRIANDKTRITTYKKRKASLYKKAQEFSTLCGVETCLIVYGPTKATDVVISEPEIWP 65

Query: 91  SCREHVNEMIASYK 104
                V  +I  YK
Sbjct: 66  KDETKVRAIIRKYK 79

BLAST of Lsi10G007500 vs. NCBI nr
Match: gi|659121915|ref|XP_008460878.1| (PREDICTED: MADS-box protein SOC1-like [Cucumis melo])

HSP 1 Score: 208.8 bits (530), Expect = 1.4e-50
Identity = 104/120 (86.67%), Postives = 109/120 (90.83%), Query Frame = 1

Query: 26  MGRGKLSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRACVFVYGPNQ-NDQSTLQ 85
           MGRGKLSMKLISNEKSRKTTF+KRKASLLRKAYELSTLCDVR CVFV+GPNQ NDQS LQ
Sbjct: 1   MGRGKLSMKLISNEKSRKTTFHKRKASLLRKAYELSTLCDVRVCVFVHGPNQSNDQSPLQ 60

Query: 86  LHTWPSCREHVNEMIASYKANCLHKRARKAFGLFDFFSERKKKIEADVSKLRKDVAEASF 145
           LHTWP C + VN MIASYK NCLHKRARKAFGL DFFSERKKK+E D+SKLRKDVAEA F
Sbjct: 61  LHTWPPCPDEVNSMIASYKTNCLHKRARKAFGLIDFFSERKKKVETDMSKLRKDVAEARF 120

BLAST of Lsi10G007500 vs. NCBI nr
Match: gi|778674258|ref|XP_011650173.1| (PREDICTED: floral homeotic protein DEFICIENS-like [Cucumis sativus])

HSP 1 Score: 198.4 bits (503), Expect = 1.9e-47
Identity = 99/122 (81.15%), Postives = 107/122 (87.70%), Query Frame = 1

Query: 26  MGRGKLSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRACVFVYGPNQ-NDQSTLQ 85
           MGRGKLSMKLISNEKSRKTTF+KRKASLLRKAYELSTLCDVR CV V+GPNQ NDQS LQ
Sbjct: 1   MGRGKLSMKLISNEKSRKTTFHKRKASLLRKAYELSTLCDVRVCVVVHGPNQSNDQSPLQ 60

Query: 86  LHTWPSCREHVNEMIASYKANCLHKRARKAFGLFDFFSERKKKIEADVSKLRKDVAEASF 145
           LHTWP   + VN MIASYK NCL+KR RK+FGL DFFSERKKK+E D+SKLRKDV+E  F
Sbjct: 61  LHTWPPSADEVNNMIASYKTNCLYKRVRKSFGLIDFFSERKKKVETDMSKLRKDVSEERF 120

Query: 146 PS 147
           PS
Sbjct: 121 PS 122

BLAST of Lsi10G007500 vs. NCBI nr
Match: gi|595970108|ref|XP_007217491.1| (hypothetical protein PRUPE_ppa027181mg, partial [Prunus persica])

HSP 1 Score: 127.5 bits (319), Expect = 4.2e-26
Identity = 57/121 (47.11%), Postives = 86/121 (71.07%), Query Frame = 1

Query: 26  MGRGKLSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRACVFVYGPNQNDQSTLQL 85
           MGRG+L M+LI+NE++RKTTF KR+  +++KAYE STLC++  C+ +YGP Q D+   +L
Sbjct: 1   MGRGRLKMELIANERARKTTFQKRRKGMMKKAYEFSTLCELDVCMIIYGPKQTDRPP-EL 60

Query: 86  HTWPSCREHVNEMIASYKANCLHKRARKAFGLFDFFSERKKKIEADVSKLRKDVAEASFP 145
           HTWP  R+ V+ +I  YKA+ + K A+K F L D   +RK K+  D+ + RK++ EA +P
Sbjct: 61  HTWPENRDEVDRIINKYKASIMRKPAKKTFDLSDLLRDRKTKVHVDIYRARKEMYEAKYP 120

Query: 146 S 147
           +
Sbjct: 121 T 120

BLAST of Lsi10G007500 vs. NCBI nr
Match: gi|645246354|ref|XP_008229316.1| (PREDICTED: MADS-box transcription factor 1-like [Prunus mume])

HSP 1 Score: 123.6 bits (309), Expect = 6.1e-25
Identity = 55/121 (45.45%), Postives = 86/121 (71.07%), Query Frame = 1

Query: 26  MGRGKLSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRACVFVYGPNQNDQSTLQL 85
           MGRG+L M+LI+NE++RKTTF KR+  +++KAYE STLC++  C+ +YGP Q D+   +L
Sbjct: 1   MGRGRLKMELIANERARKTTFQKRRKGMMKKAYEFSTLCELDVCMIIYGPKQTDRPP-EL 60

Query: 86  HTWPSCREHVNEMIASYKANCLHKRARKAFGLFDFFSERKKKIEADVSKLRKDVAEASFP 145
           +TWP  R+ V+ +I  YKA+ + K A+K F L D   +RK K+  D+ + +K++ EA +P
Sbjct: 61  YTWPENRDEVDRIINKYKASIMRKPAKKTFDLSDLLRDRKTKVHVDIYRAQKEMYEAKYP 120

Query: 146 S 147
           +
Sbjct: 121 T 120

BLAST of Lsi10G007500 vs. NCBI nr
Match: gi|596029901|ref|XP_007219420.1| (hypothetical protein PRUPE_ppa021970mg [Prunus persica])

HSP 1 Score: 123.6 bits (309), Expect = 6.1e-25
Identity = 58/121 (47.93%), Postives = 83/121 (68.60%), Query Frame = 1

Query: 26  MGRGKLSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRACVFVYGPNQNDQSTLQL 85
           MGRG+L M+LI+NE+SRKTTF KR   +++KAYE STLC+V  C+ +YGP   D+   +L
Sbjct: 1   MGRGRLKMELIANERSRKTTFQKRSKGMMKKAYEFSTLCEVDVCIIIYGPKLTDRPP-EL 60

Query: 86  HTWPSCREHVNEMIASYKANCLHKRARKAFGLFDFFSERKKKIEADVSKLRKDVAEASFP 145
            TWP   E V+ +I  YKA+ + K A+K F L D   +RK K+ AD+ + RK++ EA +P
Sbjct: 61  QTWPQNSEQVDRIINKYKASTMSKPAKKTFDLSDLLMDRKNKVYADIYRARKEMYEAKYP 120

Query: 146 S 147
           +
Sbjct: 121 T 120

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PHE2_ARATH3.6e-0936.70MADS-box transcription factor PHERES 2 OS=Arabidopsis thaliana GN=PHE2 PE=1 SV=1[more]
AGL80_ARATH4.7e-0932.76Agamous-like MADS-box protein AGL80 OS=Arabidopsis thaliana GN=AGL80 PE=1 SV=1[more]
AGL82_ARATH1.0e-0843.24Agamous-like MADS-box protein AGL82 OS=Arabidopsis thaliana GN=AGL82 PE=1 SV=1[more]
PHE1_ARATH1.4e-0836.04MADS-box transcription factor PHERES 1 OS=Arabidopsis thaliana GN=PHE1 PE=1 SV=1[more]
AGL90_ARATH8.8e-0833.93Agamous-like MADS-box protein AGL90 OS=Arabidopsis thaliana GN=AGL90 PE=1 SV=2[more]
Match NameE-valueIdentityDescription
A0A0A0LME6_CUCSA1.3e-4781.15Uncharacterized protein OS=Cucumis sativus GN=Csa_2G336070 PE=4 SV=1[more]
M5XI05_PRUPE2.9e-2647.11Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa027181mg PE=4 S... [more]
M5X3X5_PRUPE4.2e-2547.93Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021970mg PE=4 SV=1[more]
W9SQ48_9ROSA5.7e-2246.09MADS-box transcription factor PHERES 1 OS=Morus notabilis GN=L484_027089 PE=4 SV... [more]
A0A068TNU9_COFCA2.4e-2043.75Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00015001001 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G55690.12.1e-1237.14 MADS-box transcription factor family protein[more]
AT1G65300.12.0e-1036.70 AGAMOUS-like 38[more]
AT5G26630.12.6e-1036.21 MADS-box transcription factor family protein[more]
AT5G48670.12.6e-1032.76 AGAMOUS-like 80[more]
AT5G58890.15.9e-1043.24 AGAMOUS-like 82[more]
Match NameE-valueIdentityDescription
gi|659121915|ref|XP_008460878.1|1.4e-5086.67PREDICTED: MADS-box protein SOC1-like [Cucumis melo][more]
gi|778674258|ref|XP_011650173.1|1.9e-4781.15PREDICTED: floral homeotic protein DEFICIENS-like [Cucumis sativus][more]
gi|595970108|ref|XP_007217491.1|4.2e-2647.11hypothetical protein PRUPE_ppa027181mg, partial [Prunus persica][more]
gi|645246354|ref|XP_008229316.1|6.1e-2545.45PREDICTED: MADS-box transcription factor 1-like [Prunus mume][more]
gi|596029901|ref|XP_007219420.1|6.1e-2547.93hypothetical protein PRUPE_ppa021970mg [Prunus persica][more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR002100TF_MADSbox
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0046983 protein dimerization activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi10G007500.1Lsi10G007500.1mRNA


Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002100Transcription factor, MADS-boxPRINTSPR00404MADSDOMAINcoord: 63..84
score: 8.7E-11coord: 28..48
score: 8.7E-11coord: 48..63
score: 8.7
IPR002100Transcription factor, MADS-boxPFAMPF00319SRF-TFcoord: 36..77
score: 3.9
IPR002100Transcription factor, MADS-boxSMARTSM00432madsneu2coord: 26..85
score: 2.4
IPR002100Transcription factor, MADS-boxPROFILEPS50066MADS_BOX_2coord: 26..76
score: 18
IPR002100Transcription factor, MADS-boxunknownSSF55455SRF-likecoord: 27..125
score: 9.29
NoneNo IPR availablePANTHERPTHR11945MADS BOX PROTEINcoord: 27..142
score: 1.4
NoneNo IPR availablePANTHERPTHR11945:SF176PROTEIN AGAMOUS-LIKE 82coord: 27..142
score: 1.4

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None