Lsi10G006620 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.TCGGGACAAAAGATGTAATGAAATGAGTATAAAAGAAGAAGACTACATCATAATTTTGAACCGGAAACTGTTAGAGATGAAGTTCCAAAATTTGTGCATCTGCTTCTGCTTCATCTTGTTTGCAGCCGTGTCGGAAGCCGCCAGAATCGGACTCGGCGGCATTCGGTCGTCGGAAAGCCGCTTCGGTTTTTTCATTTTCGGAGATTCCTATGTCGACGCCGGAAACAACAACTACATCAACACCACCAGCGACTTTCAGGCCAATTTCCCGCCCTACGGTGAAAGCTTCTTCCAGATCCCCACCGGCAGGTTTACTGACGGCCGTAACATTCCCGATTTCTTAGGTCATTATCATTTCTTCTGTTATTATTTCTTTTGAAAAAAATTGGTGTTGGAGCTTCTTTGATTGTTAGTAGCTGTTAGATTGCTGAAGATATTTCTTCTTGCCCTACTTAAACCTTGGTGCTTGAACTGCTGGTTAATGCTCTGATGGATGAGTAACATAATTTTTGTTCATTATTAAGAAGAAGGGGAACGGGGAACGGGGCTTAGTTATAATCATTTCCTTATGATTCAAATGTTTTAACTAATTTGGTTAATGGATTGGATAGCTTTTGGATCTATTAATCCTATTTTTTCTTTGACTTTGAAGTTCTATCATATGATTTGTGTTCACAAGGATTGAGGATTTAGTATCAGAGTAGATTTTGAGGGCAGTGAAATTGATGTCATTCTGAATGTTCATATTGAAGTGATAACTTCAAGTTTGTTGCTAACTGGAGGAACAGAACTTGAAAGACCAAACTTACATTTTGTACTGTTTTATTGCTGATTCTAGCTAGCCACAGGGAATGTCATTGCTACAGTATTGTCTTTAGAACTTGAAATTTATTATGCTGATGAATGATAGAGAAATACTGGAATCAAATGGTATGATTCGGTCGAGTATTAATTAGGGTTGAAGAGCGTTGATATAATATTAAATTTGTCATAATAATCCATTAACTTAAGTTTTTATGTCAATCGGTCCTAAGCTCTCCTTCGTTCTAGACGTGTTTCCAGACAGATCTAGAACGAAAGATGGATAAAACATTAGGTTGTTTCCAAAGAAAGAAACAAAGAGGAGAAACTTGGTTTTCTTGTATCCAAAGTTTCATGGAATGTTTCTGAAGGTTGAGAATCGACATGAACAAGAAACAGAAATGTGATTAAATGACCCTATAGTCCAAGTTTATAATGTTTTATCAGTACGCTTATTATCAAGAAATGTTAACGCAGGTGAGTATGCAAACTTGCCTTTACTTCCACCATATTTGGATCCTCACAATGATCTCTATGACTATGGAGCCAATTTTGCATCTGGTGGAGGTGGAGCTTTAGCACTGAGTCATCAAGAACAGGTTCCAATCAAATCAATCAAACCAATTTCTTTTCCCTTTTTTTTCCCTCTGCTGAATTGAATGCATTTGTTTGGTTTTCAGGCCATTGGGCTTCAAACTCAGCTGAAGTTTTTCAAAAAGGTGGAGAAATCATTAAGAAAGAAGCTGGGAAATGCAAGATCTCAAAGCTTCCTCTCTAACTCTGTTTTTCTCTTCAATTTTGGAGGAAATGATTACCTAAATCCTTTCGACATTAGCTATGACATCTTCAAAACCATTGAAGCTCAAGAACAGTACGTGAATATGGTGATCGGAAACATAACGATAGCAATTAAGGTAATATCACGCGTCTAAATATGTTAATAAATAATAATTTAAACCTCGTTTGATAACTACTTTGTTTTCAGTTTTATGTTTTTGAAATTTATGTTTTTCTTTACTATGATTTTCACATTTTCGGTAGAAACACTTAAATTCTTAGTCAAATTCTAAAAGCAAAAACAACTTCTTTAAGAACGGCTTCTTTTTTAGTTTTCAAATTTTTGCTTGATTGTTGAAAACATTAGTAGGAAATTTTTTTTTTATAGGTGTAAGTAGTGTTTATAAATTTAATTTTAAAAAATCAAATATAAAGAACAAATAATTTCTCAAACGAGGCCATATATAGTTTTTGGTTTTTTTGTTTTGGAAAATAAACTTGTTTTCTCACTATTTCTTTATAATAGCTTTCATCATCTAAGTAAACATTTAAATTCTTAGATTAGTCAAATTTCAAACGCAAAACAAGTTATTAGAAACTACTTTTTTTTAGTTTTTAAATTTGTATTTGAATTTTAAAAACATTTACAACAAATAATTAGGTGTGTGCATCAATTGGTCCATGTACCGGTGCGACCACCAATAAGTTGATTTCTGGCAGTTATGGAGAGGCTAAAGATGCCGGCCTGCCAACTACACGGTCGGCCAATCGATTTTTGTAGGTTTTCCAACAGAAAAGAGGGAGGAGATAAGATTAAAGGGAGAAGAAGAGAGAAAAATGGAGGAGAGAGAAGAATGTTTCCAAAAGGGAGAAAAGGAGAGAGAGTAAATGAGAAGGAGAAAGAGGAGAAGATGAAAAAAAGATTATAGAGAAAGAAAATGAGTTGGGAGAAGAGAACTTAATTAATGGAGAAAGGAACAAGACAAATAAATGATGGAGAGAGAAGAAAGGGGAGAAATGACTATTTTTAACCCAAAAATGTTTTCACATTTTAAAACTAACATTGTTTTTTTAAAAAACTAATTTTTCTAACTTATTTTTACTTTTTGAGATTTTAAGTTGAGAATCTTACATGATTAAAATACAATTTTGTCCTCCCATTCAAAAGTCTACCATTTTAACTTTCACTCTGCCTCCACTTAAAATCTTAAAAAGTAAGAAGAAGATTAGAAAAAGTAATTTTTAAAAAGTAAGTTAGTTCAAAATTTTTTTAAATTAAAAATAGCAATTTTTGAAGAAAAGGCCATGAAGGATGGAAATGTGATAGAGAAAATGACTTTTTTAGTATGTTTTTATTGTAATTTAGTGATTTCACATCACATCAATCAAGACTTAATGATGGAAAGGGGAGAGAGAAATGAATTGTTTAGTACTTATTTTTTATTTAATAATGAATTATTTGACGCCAATCTATACATTGATCATGACAGCTTTTCTTTTACAATTACACGTCATTAAAGGTAAGTTGATGAACATTTTTAATATCATCGCACGGTTGGTCGGAAATATGTTTTTCAGATCCTCCGACCGGCCGAACTTTGGTTTCTGAAAAACCGACACTGATTGATGTCGGGTCATTCGGTTTTATGGTTTGGTTTGCTCACCCCTACAAATAACAAAATTTTACAAGTAGAAGTAATGTTTAAATGCGTAATTTTCATTATCATAAATGAGGTTTTAATGATACATCATTTTGCTTTGTAATAGATTAAGAAATAAATCAGAATTGTAAGGTTGGTTTGGATTTTATATGTGATAGGAAGTATACAAATCTGGAGGAAGGAAATTTGGGTTTCTGGCAGTGCCTCCATTAGGGTATATGCCAAGTTCAAGATTGAAAAAAAGTGCTCAATTTTTCGAAGAGGCTTCTTCAATAGCAAGGCTTCACAACAAGCTGCTTCCCATTGCCCTTCAGAAACTTTCCAAACAACTCAAAGGATTCAAATACACTTTTGCTGATGTTCACACTTTGCTTCTTCAAAGAATACTAAACCCTACAAAATACGGTAAATAAACTTTACTCTACAGCTATTTTTCATTATTTATGGCTTTAAATCCTATTCCGGTCTCTATACTTTTTAGCTTCCATTCATATTAGTTTCTACACTTTTAAAATGTCTATTTTGATCCCACTCATAGTTTAAATTTTCAATTTCGATAGGCTCAAAATTTAAGTTAGGGAGCCCCAATTTCTCGAAATTTCGATTTTATTTTTTTTAAATTAGCTATGTTAGAACTGGTATTTTTTTTGTCTCTTTTACTATCAAGAAACAACATAGTTTCATTCAATCTTTTCCATTGAATTTTCACATTATTTCACCTCAAACTTGAATTGATGTGAGTTCTTTAATATTCCTCTCATTTTCTCTAAGCTCTATCTACTCCTAGAGCTTTCTTTTTCTTCTTTCTTTTCCATTATGTTATGCTTAATGTTATGTTTTTTATATCCCGTTTATTTTAATGTTATGATTTTTCTATTTTTATTGTGTTATGTTATGTTAGTTTAATGCTATGATTTTTCATTTTTGTAGCTATTTCATTTTATAATAAACAATTTACAATTATTTTATATGCAAATATTTCATGTTATTTGATTTTGTAATTATTTTCTCATTTCTTTTTTAAATTTCTGCTCTTGCATTGACATTTACACAAATATTTTATAATATACATCTAAATATTGTCTTACTTTAGAGAAATAATGATTAAAAATTGTCAATTATAGTCTAACTCAGTTACAATCATAGTTTCATTAACTAATTATAACAATTTCCATTAATTTTCATAAAGTTTATTGAAATTTTTATTGATATCGATATTTCCATCGATATCGATATTTTCATCGATATTTCTGTAAAATCGGAACCTCGATATTTCCATTGACATCGATATTTTGAACTTTGGTCCCATTACATTTAAGTTATATTCTTTTGAGTTTTTGTCACTTTCTAAAAGTATTGAAATTAAATAGACATTTTAAAAATATAAGGACTTAGATGGACCAAAAAAAAAATTAAAATAGTATTGAAACCTTATTTCTTTAACATCACATGCATCACAAGAGACTAGATTTTGACGAACGTTCATATTCTCGAGGAGGACTAGTTAAATAACGTTTATGTTTTCGAGACGCCCCTTGAAAATTCGGGTTTTAGGGTTAGATTATTATTGGCACATTGTTTGAAAATATGAATGAAGGTTTCTAACATTTGAAAAGTTATGGTATTTGTTTGGATGAAGGTTTCAAGATAGTAGACACAGCTTGTTGTGGAAGTGACGAATTCAGAGGGGTTTATAATTGTGGAAGAAATTTGGGAGCTTCCCCCTTTACGCATTGCCAAAATCTTGAAGATCATATGTTCTTTGATTCCTTTCATCCCACTCAAAAGATTTTCAAGCAGCTTGCAGAAGAGTTTTGGAGTGGAGATGCTGAAATTGTTATGCCTTTGAACTTCAAACAACTCTTTCAATATGAGCCAACTTTGGCTTCTTAT TCGGGACAAAAGATGTAATGAAATGAGTATAAAAGAAGAAGACTACATCATAATTTTGAACCGGAAACTGTTAGAGATGAAGTTCCAAAATTTGTGCATCTGCTTCTGCTTCATCTTGTTTGCAGCCGTGTCGGAAGCCGCCAGAATCGGACTCGGCGGCATTCGGTCGTCGGAAAGCCGCTTCGGTTTTTTCATTTTCGGAGATTCCTATGTCGACGCCGGAAACAACAACTACATCAACACCACCAGCGACTTTCAGGCCAATTTCCCGCCCTACGGTGAAAGCTTCTTCCAGATCCCCACCGGCAGGTTTACTGACGGCCGTAACATTCCCGATTTCTTAGTACGCTTATTATCAAGAAATGTTAACGCAGGTGAGTATGCAAACTTGCCTTTACTTCCACCATATTTGGATCCTCACAATGATCTCTATGACTATGGAGCCAATTTTGCATCTGGTGGAGGTGGAGCTTTAGCACTGAGTCATCAAGAACAGGCCATTGGGCTTCAAACTCAGCTGAAGTTTTTCAAAAAGGTGGAGAAATCATTAAGAAAGAAGCTGGGAAATGCAAGATCTCAAAGCTTCCTCTCTAACTCTGAAGTATACAAATCTGGAGGAAGGAAATTTGGGTTTCTGGCAGTGCCTCCATTAGGGTATATGCCAAGTTCAAGATTGAAAAAAAGTGCTCAATTTTTCGAAGAGGCTTCTTCAATAGCAAGGCTTCACAACAAGCTGCTTCCCATTGCCCTTCAGAAACTTTCCAAACAACTCAAAGGATTCAAATACACTTTTGCTGATATAGTAGACACAGCTTGTTGTGGAAGTGACGAATTCAGAGGGGTTTATAATTGTGGAAGAAATTTGGGAGCTTCCCCCTTTACGCATTGCCAAAATCTTGAAGATCATATGTTCTTTGATTCCTTTCATCCCACTCAAAAGATTTTCAAGCAGCTTGCAGAAGAGTTTTGGAGTGGAGATGCTGAAATTGTTATGCCTTTGAACTTCAAACAACTCTTTCAATATGAGCCAACTTTGGCTTCTTAT ATGAGTATAAAAGAAGAAGACTACATCATAATTTTGAACCGGAAACTGTTAGAGATGAAGTTCCAAAATTTGTGCATCTGCTTCTGCTTCATCTTGTTTGCAGCCGTGTCGGAAGCCGCCAGAATCGGACTCGGCGGCATTCGGTCGTCGGAAAGCCGCTTCGGTTTTTTCATTTTCGGAGATTCCTATGTCGACGCCGGAAACAACAACTACATCAACACCACCAGCGACTTTCAGGCCAATTTCCCGCCCTACGGTGAAAGCTTCTTCCAGATCCCCACCGGCAGGTTTACTGACGGCCGTAACATTCCCGATTTCTTAGTACGCTTATTATCAAGAAATGTTAACGCAGGTGAGTATGCAAACTTGCCTTTACTTCCACCATATTTGGATCCTCACAATGATCTCTATGACTATGGAGCCAATTTTGCATCTGGTGGAGGTGGAGCTTTAGCACTGAGTCATCAAGAACAGGCCATTGGGCTTCAAACTCAGCTGAAGTTTTTCAAAAAGGTGGAGAAATCATTAAGAAAGAAGCTGGGAAATGCAAGATCTCAAAGCTTCCTCTCTAACTCTGAAGTATACAAATCTGGAGGAAGGAAATTTGGGTTTCTGGCAGTGCCTCCATTAGGGTATATGCCAAGTTCAAGATTGAAAAAAAGTGCTCAATTTTTCGAAGAGGCTTCTTCAATAGCAAGGCTTCACAACAAGCTGCTTCCCATTGCCCTTCAGAAACTTTCCAAACAACTCAAAGGATTCAAATACACTTTTGCTGATATAGTAGACACAGCTTGTTGTGGAAGTGACGAATTCAGAGGGGTTTATAATTGTGGAAGAAATTTGGGAGCTTCCCCCTTTACGCATTGCCAAAATCTTGAAGATCATATGTTCTTTGATTCCTTTCATCCCACTCAAAAGATTTTCAAGCAGCTTGCAGAAGAGTTTTGGAGTGGAGATGCTGAAATTGTTATGCCTTTGAACTTCAAACAACTCTTTCAATATGAGCCAACTTTGGCTTCTTAT MSIKEEDYIIILNRKLLEMKFQNLCICFCFILFAAVSEAARIGLGGIRSSESRFGFFIFGDSYVDAGNNNYINTTSDFQANFPPYGESFFQIPTGRFTDGRNIPDFLVRLLSRNVNAGEYANLPLLPPYLDPHNDLYDYGANFASGGGGALALSHQEQAIGLQTQLKFFKKVEKSLRKKLGNARSQSFLSNSEVYKSGGRKFGFLAVPPLGYMPSSRLKKSAQFFEEASSIARLHNKLLPIALQKLSKQLKGFKYTFADIVDTACCGSDEFRGVYNCGRNLGASPFTHCQNLEDHMFFDSFHPTQKIFKQLAEEFWSGDAEIVMPLNFKQLFQYEPTLASY
BLAST of Lsi10G006620 vs. Swiss-Prot
Match: GLIP3_ARATH (GDSL esterase/lipase 3 OS=Arabidopsis thaliana GN=GLIP3 PE=2 SV=2) HSP 1 Score: 198.7 bits (504), Expect = 1.0e-49 Identity = 133/381 (34.91%), Postives = 184/381 (48.29%), Query Frame = 1
BLAST of Lsi10G006620 vs. Swiss-Prot
Match: GLIP5_ARATH (GDSL esterase/lipase 5 OS=Arabidopsis thaliana GN=GLIP5 PE=2 SV=2) HSP 1 Score: 144.4 bits (363), Expect = 2.2e-33 Identity = 80/163 (49.08%), Postives = 103/163 (63.19%), Query Frame = 1
BLAST of Lsi10G006620 vs. Swiss-Prot
Match: GLIP1_ARATH (GDSL esterase/lipase 1 OS=Arabidopsis thaliana GN=GLIP1 PE=1 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 9.7e-29 Identity = 70/138 (50.72%), Postives = 89/138 (64.49%), Query Frame = 1
BLAST of Lsi10G006620 vs. Swiss-Prot
Match: GLIP2_ARATH (GDSL esterase/lipase 2 OS=Arabidopsis thaliana GN=GLIP2 PE=2 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 4.8e-28 Identity = 73/170 (42.94%), Postives = 99/170 (58.24%), Query Frame = 1
BLAST of Lsi10G006620 vs. Swiss-Prot
Match: GRIP4_ARATH (GDSL esterase/lipase 4 OS=Arabidopsis thaliana GN=GLIP4 PE=2 SV=2) HSP 1 Score: 110.5 bits (275), Expect = 3.6e-23 Identity = 59/163 (36.20%), Postives = 85/163 (52.15%), Query Frame = 1
BLAST of Lsi10G006620 vs. TrEMBL
Match: A0A0A0LQ38_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G296110 PE=4 SV=1) HSP 1 Score: 268.9 bits (686), Expect = 8.7e-69 Identity = 139/187 (74.33%), Postives = 153/187 (81.82%), Query Frame = 1
BLAST of Lsi10G006620 vs. TrEMBL
Match: W9RP33_9ROSA (GDSL esterase/lipase 1 OS=Morus notabilis GN=L484_005044 PE=4 SV=1) HSP 1 Score: 259.2 bits (661), Expect = 6.9e-66 Identity = 153/380 (40.26%), Postives = 203/380 (53.42%), Query Frame = 1
BLAST of Lsi10G006620 vs. TrEMBL
Match: A0A061E2G3_THECC (GDSL-motif lipase 2, putative OS=Theobroma cacao GN=TCM_007496 PE=4 SV=1) HSP 1 Score: 247.7 bits (631), Expect = 2.1e-62 Identity = 136/331 (41.09%), Postives = 178/331 (53.78%), Query Frame = 1
BLAST of Lsi10G006620 vs. TrEMBL
Match: A0A067E4E0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g016962mg PE=4 SV=1) HSP 1 Score: 246.5 bits (628), Expect = 4.6e-62 Identity = 137/331 (41.39%), Postives = 183/331 (55.29%), Query Frame = 1
BLAST of Lsi10G006620 vs. TrEMBL
Match: A0A068VMK4_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00009492001 PE=4 SV=1) HSP 1 Score: 240.7 bits (613), Expect = 2.5e-60 Identity = 148/384 (38.54%), Postives = 200/384 (52.08%), Query Frame = 1
BLAST of Lsi10G006620 vs. TAIR10
Match: AT1G53990.1 (AT1G53990.1 GDSL-motif lipase 3) HSP 1 Score: 198.7 bits (504), Expect = 5.6e-51 Identity = 133/381 (34.91%), Postives = 184/381 (48.29%), Query Frame = 1
BLAST of Lsi10G006620 vs. TAIR10
Match: AT1G53920.1 (AT1G53920.1 GDSL-motif lipase 5) HSP 1 Score: 144.4 bits (363), Expect = 1.3e-34 Identity = 80/163 (49.08%), Postives = 103/163 (63.19%), Query Frame = 1
BLAST of Lsi10G006620 vs. TAIR10
Match: AT5G40990.1 (AT5G40990.1 GDSL lipase 1) HSP 1 Score: 129.0 bits (323), Expect = 5.5e-30 Identity = 70/138 (50.72%), Postives = 89/138 (64.49%), Query Frame = 1
BLAST of Lsi10G006620 vs. TAIR10
Match: AT1G53940.1 (AT1G53940.1 GDSL-motif lipase 2) HSP 1 Score: 126.7 bits (317), Expect = 2.7e-29 Identity = 73/170 (42.94%), Postives = 99/170 (58.24%), Query Frame = 1
BLAST of Lsi10G006620 vs. TAIR10
Match: AT3G14225.1 (AT3G14225.1 GDSL-motif lipase 4) HSP 1 Score: 110.5 bits (275), Expect = 2.0e-24 Identity = 59/163 (36.20%), Postives = 85/163 (52.15%), Query Frame = 1
BLAST of Lsi10G006620 vs. NCBI nr
Match: gi|449461429|ref|XP_004148444.1| (PREDICTED: GDSL esterase/lipase 1 [Cucumis sativus]) HSP 1 Score: 268.9 bits (686), Expect = 1.3e-68 Identity = 139/187 (74.33%), Postives = 153/187 (81.82%), Query Frame = 1
BLAST of Lsi10G006620 vs. NCBI nr
Match: gi|659116208|ref|XP_008457963.1| (PREDICTED: uncharacterized protein LOC103497528 [Cucumis melo]) HSP 1 Score: 265.8 bits (678), Expect = 1.1e-67 Identity = 140/187 (74.87%), Postives = 151/187 (80.75%), Query Frame = 1
BLAST of Lsi10G006620 vs. NCBI nr
Match: gi|703130459|ref|XP_010104613.1| (GDSL esterase/lipase 1 [Morus notabilis]) HSP 1 Score: 259.2 bits (661), Expect = 9.9e-66 Identity = 153/380 (40.26%), Postives = 203/380 (53.42%), Query Frame = 1
BLAST of Lsi10G006620 vs. NCBI nr
Match: gi|590688565|ref|XP_007042986.1| (GDSL-motif lipase 2, putative [Theobroma cacao]) HSP 1 Score: 247.7 bits (631), Expect = 3.0e-62 Identity = 136/331 (41.09%), Postives = 178/331 (53.78%), Query Frame = 1
BLAST of Lsi10G006620 vs. NCBI nr
Match: gi|641826528|gb|KDO45746.1| (hypothetical protein CISIN_1g016962mg [Citrus sinensis]) HSP 1 Score: 246.5 bits (628), Expect = 6.7e-62 Identity = 137/331 (41.39%), Postives = 183/331 (55.29%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |