Lsi10G004600 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi10G004600
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	ER lumen protein retaining receptor
Location	chr10 : 6678192 .. 6681529 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGACTCAGATACGTTGACCCGACAACCCAATTCAGCCAACGCCCATTCGCAATATTTTTCTGAAATCTCAAAGAAGTGTAGACGCATCAAATTTCATCGTCCGCGGTTCACCTGTCTTTCCCTTCGTCGGTAGCTCGCCGCAGAACCTCAACTTCACCGGAAGATCAACCCTCCGCCGTCTCCGGTTAGCTCTACAACCGAACAGAAGAAGAAGGGATTACAGTAATCTCATTTCATGAGGCCGGCAAGAAATCTGATCCATATCGTGTCGGTATGGGTCCGGCGACAGCCGCCGAAGGTGAAGGCCTTTTTGGCCGTCGTGCTTGGCATGGTGGCTCTGGTGGCACTTCGATTCATCGTTCACGATCACGACAATCTATTTGTCGTTGCCGAAGCAGTGCACTCCATTGGGATATCGGTTCTCATCTATAAGTTCACGAAGGAGAGAACATGTGCTGGTAATCCTTGGATTTTTCTGGTTAAATGCCCTTATATAATTATTTTCTGGAGGTTAATTTATGGATTGTTATTCCAAATGAACTGATAAGTGAAATTATTTGTCGAAATTTGTATTATGGATTCGGACTTTATACCTTTGTCCGCTTGTCCCTAATCATTTATTTTCCAGCATCTATCTGGCCTTTAGCTGAGATGAACTATGGGAAATCAGGAATCCTCTTTGTTAGTTAATTTAGTTAGACTTTAAATTCACGATTAATAGTTATTCTCGTTAAAGTCACCCAACTTTTATTGAGAAAGAATGAAAGAATACACAGACATACAGTAATAAAGTCCTCGAAATGGATCCAAACTGCTCGTTGTTGGAAAATGACCTTAGTCACAAAGGACGGAAACCTTATAGTTTAATCTTCATGGGACTTGTTAGAGTGTCATCTATTCTCTAATCCTTCATTCAAATGCTTATTTTGCACGGAGAGCAATTTGTAAGTTCAATTTAAAGCGGTTGTAATTGTAATTGTGTGAATTCAGAGCTGCACAATTTGTTATATAGTAGAAATTCAGGCTCCATCTTATAACAAATTAAACCTATAAAACTACTTCAACATATTGGGTTGTTTTCTTTGTTTCAAAATTCAAGGCAAGTTGTTTTTGAATTTTGGTTAAGAATTCAAATGTTTACTTTGGAAAGATGAAAATGATGAAGAAATTGTGAGAAAACAAATATAATTTTGAAAAGGTATATGGTTATCAAACGAGACCTTGGTTATTTATATGGTTTTCATGTCATTTAAGTTTTGTTAGTCTTAGTTTCCATTGCAAATCATGTTGTTTTGAATCAGTTGGGTACTCTGGTTGCGTCTTATTGCTTATTGATTGCTCTAGATGTTCTCTCTATGCATTCCCTCTTTCACACACTATTGTGAAACATTGCAGGAATATCGCTCAAGTCTCAGGAATTAACCGCTATCTTCTTGGCCGTGAGGTTGTATTGTAGTTTTGTTATGGAGCATGATATACACACCCTATTAGATTTAGCAACACTGGCCACAACCCTCTGGGTGGTATATATGATCCGGTTCAAACTTAAGTCGAGCTACATGGAGGATAAAGACAACTTTGCATTATATTATGTGGTAAGGTTCTATTTGTTAAGTTCCTTCTTCCCGATCTTCAGGGGAAACTAAGGCGCCGTTTGGTAACCATCATTTGGTTTTTGGTTTTTAGTTTTTGAAAATTAAGCCTATAAACACTCCTTCCACCTCCAAATTTCTTATTTTGTCATCTATTTTTTACTAATGTTTTAAAAAACCATACAAATTTTGAAAACTAAAAAAAATAGTTTTAAAAACTTGTTTTTGTTTTTGAAATTTGACTAAGAATTCAACTCATTATCTTAAGAAAGATGGAAATCATTGTATGAATTTGAGAGAAAGTAAGCTTAATTTTCAAAAACTAAAAACTAAAAACCAAATGGTTACCAAACACGCCTTAACCAATTGGATTTTATATCATCCTTGCCAAATATATAGAAGGTTCTTTCTGTTGGTTGCGTTACTAACATCATTAGTTCTTTGTTAAGAAGCAACTTCAATGAAAAGCGACATATAAAAAACGAGGAGAAAACCCCAAGCCAGTTAGTATTATTAAATATTGATGTTTCTTGTGGCCATGGAAGCAACAAGTTTTTTTGTTGGTAATTTGTGTGCAGGACTAGTGAGTTGGATGCATATTTTTGTGGCTTACTAAATATCTTGACTTTATATTTTGGATGCAGATAGCACCCTGTGCTGTATTGGCTTTACTTATTCATCCATCAACTTCTCATCACTTTGTTAACAGAGTTTTCTGGGCATTTTGTGTGTATCTGGAAGCTGTTTCAGTGTTGCCCCAGTTGCGAGTGATGCAGAACACTAAGGTACGATATTGCATAACGAAATGAATTTACATGCCTTACAAAACTACAAATCTGGCGAGGTGTTAATGCCCAACTTTTCCCCCTCAACTTTCAGATTGTTGAACCATTTACTGCTCACTATGTATTTGCATTGGGTATTGCAAGATTCCTTAGCTGCGCCCATTGGGTTCTCCAGGTTTGATTTTCTATAGTTTTTCTTTATTCTAGCACTGGTTTGTATTTGTACTTGCTTTGTTATTTAAGTTAACTATAGGTAAAAATTTACTGAGAAAACTCTACAATCTTTGATTTTTTATTGCTCTGGTTTCTTGTTCTTCAACTCTGTTGGATTTCTTTATCCGGAAGAAAAACTGAGTTTGAACTAACTATGTTACATGCATTTCCAAATTAATATACATTAATAAAACCTACCACATTTAAGCTGTATATAACTAATTGTGCATATCCCTTTATTTAAGTCTACAAATTCACTTTTGTGATTTGCTATTGATGGATGATGGCATTGCCTTCGATTCTATATCAGGTCTTGGATAGTCGTGGACATCTTCTAGTAGCTCTCGGTTATGGGTTATGGCCATCTATGGTTCTAATCTCAGAAATTGTGCAGACTTTTATCCTAGCCGACTTCTGTTACTATTATGTGAAGAGGTCAGCTCTTCTTCTTTATTTGGAAAATTCGACCAATAACTTTTCATTGATGCTGAACTTTCTGTCTTGAAATTTTGCAGCGTTTTGGGGGGACAGCTTGTCCTACGACTACCTTCTGGAGTGGTGTGACGAACAGATGTTGTGTCATGTGTTTTTTTTGTCCATAGCCAGGCCAAGTTCTTTTCTTGACGTGTTTAAGGGTATGTGGTTGATTTTGTTATTATAACTTGAAATCACCTTGGCTGCATGTAAAGTTGATTATTCAAGAAGATTGATAATATATCAAATTTCATTTCTTATGGTATATAGTAG

mRNA sequence

CCGACTCAGATACGTTGACCCGACAACCCAATTCAGCCAACGCCCATTCGCAATATTTTTCTGAAATCTCAAAGAAGTGTAGACGCATCAAATTTCATCGTCCGCGGTTCACCTGTCTTTCCCTTCGTCGGTAGCTCGCCGCAGAACCTCAACTTCACCGGAAGATCAACCCTCCGCCGTCTCCGGTTAGCTCTACAACCGAACAGAAGAAGAAGGGATTACAGTAATCTCATTTCATGAGGCCGGCAAGAAATCTGATCCATATCGTGTCGGTATGGGTCCGGCGACAGCCGCCGAAGGTGAAGGCCTTTTTGGCCGTCGTGCTTGGCATGGTGGCTCTGGTGGCACTTCGATTCATCGTTCACGATCACGACAATCTATTTGTCGTTGCCGAAGCAGTGCACTCCATTGGGATATCGGTTCTCATCTATAAGTTCACGAAGGAGAGAACATGTGCTGGAATATCGCTCAAGTCTCAGGAATTAACCGCTATCTTCTTGGCCGTGAGGTTGTATTGTAGTTTTGTTATGGAGCATGATATACACACCCTATTAGATTTAGCAACACTGGCCACAACCCTCTGGGTGATAGCACCCTGTGCTGTATTGGCTTTACTTATTCATCCATCAACTTCTCATCACTTTGTTAACAGAGTTTTCTGGGCATTTTGTGTGTATCTGGAAGCTGTTTCAGTGTTGCCCCAGTTGCGAGTGATGCAGAACACTAAGATTGTTGAACCATTTACTGCTCACTATGTATTTGCATTGGGTATTGCAAGATTCCTTAGCTGCGCCCATTGGGTTCTCCAGGTCTTGGATAGTCGTGGACATCTTCTAGTAGCTCTCGGTTATGGGTTATGGCCATCTATGGTTCTAATCTCAGAAATTGTGCAGACTTTTATCCTAGCCGACTTCTGTTACTATTATGTGAAGAGCGTTTTGGGGGGACAGCTTGTCCTACGACTACCTTCTGGAGTGGTGTGACGAACAGATGTTGTGTCATGTGTTTTTTTTGTCCATAGCCAGGCCAAGTTCTTTTCTTGACGTGTTTAAGGGTATGTGGTTGATTTTGTTATTATAACTTGAAATCACCTTGGCTGCATGTAAAGTTGATTATTCAAGAAGATTGATAATATATCAAATTTCATTTCTTATGGTATATAGTAG

Coding sequence (CDS)

ATGAGGCCGGCAAGAAATCTGATCCATATCGTGTCGGTATGGGTCCGGCGACAGCCGCCGAAGGTGAAGGCCTTTTTGGCCGTCGTGCTTGGCATGGTGGCTCTGGTGGCACTTCGATTCATCGTTCACGATCACGACAATCTATTTGTCGTTGCCGAAGCAGTGCACTCCATTGGGATATCGGTTCTCATCTATAAGTTCACGAAGGAGAGAACATGTGCTGGAATATCGCTCAAGTCTCAGGAATTAACCGCTATCTTCTTGGCCGTGAGGTTGTATTGTAGTTTTGTTATGGAGCATGATATACACACCCTATTAGATTTAGCAACACTGGCCACAACCCTCTGGGTGATAGCACCCTGTGCTGTATTGGCTTTACTTATTCATCCATCAACTTCTCATCACTTTGTTAACAGAGTTTTCTGGGCATTTTGTGTGTATCTGGAAGCTGTTTCAGTGTTGCCCCAGTTGCGAGTGATGCAGAACACTAAGATTGTTGAACCATTTACTGCTCACTATGTATTTGCATTGGGTATTGCAAGATTCCTTAGCTGCGCCCATTGGGTTCTCCAGGTCTTGGATAGTCGTGGACATCTTCTAGTAGCTCTCGGTTATGGGTTATGGCCATCTATGGTTCTAATCTCAGAAATTGTGCAGACTTTTATCCTAGCCGACTTCTGTTACTATTATGTGAAGAGCGTTTTGGGGGGACAGCTTGTCCTACGACTACCTTCTGGAGTGGTGTGA

Protein sequence

MRPARNLIHIVSVWVRRQPPKVKAFLAVVLGMVALVALRFIVHDHDNLFVVAEAVHSIGISVLIYKFTKERTCAGISLKSQELTAIFLAVRLYCSFVMEHDIHTLLDLATLATTLWVIAPCAVLALLIHPSTSHHFVNRVFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGIARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISEIVQTFILADFCYYYVKSVLGGQLVLRLPSGVV

Homology

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BLAST of Lsi10G004600 vs. Swiss-Prot
Match: ERD2_DROME (ER lumen protein-retaining receptor OS=Drosophila melanogaster GN=KdelR PE=2 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 6.6e-19
Identity = 76/226 (33.63%), Postives = 117/226 (51.77%), Query Frame = 1


Query: 47  NLFVVA-EAVHSIGISVLIYKFTKERTCAGISLKSQELTAIFLAVR---LYCSFV-MEHD 106
           N+F  A +  H   I +L+ K  K R+CAGIS KSQ L A+    R   L+ ++V + + 
Sbjct: 2   NIFRFAGDLSHVFAIIILLLKIWKTRSCAGISGKSQILFAVVYLTRYLDLFTTYVSLYNS 61

Query: 107 IHTLLDLATLATTLWV---------------------IAPCAVLALLIHPSTSHHF-VNR 166
           +  +L LAT   T+++                     + PCA+L+L+I+    H F V  
Sbjct: 62  VMKVLFLATSGATVYLMYVKFKATYDHNHDSFRIEFLLVPCALLSLVIN----HEFTVME 121

Query: 167 VFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGIARFLSCAHWVLQVLDSRGHL 226
           V W F +YLE+V++LPQL ++  T   E  T+HY+FALG  R L   +WV + +    + 
Sbjct: 122 VLWTFSIYLESVAILPQLFLVSRTGEAESITSHYLFALGSYRALYLLNWVYRYMVESHYD 181

Query: 227 LVALGYGLWPSMVLISEIVQTFILADFCYYYVKSVLGGQLVLRLPS 246
           L+A+  G          +VQT +  DF Y Y+  VL G+  L+LP+
Sbjct: 182 LIAIFAG----------VVQTVLYCDFFYLYITKVLKGK-KLQLPA 212

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BLAST of Lsi10G004600 vs. Swiss-Prot
Match: ERD22_CAEEL (Putative ER lumen protein-retaining receptor C28H8.4 OS=Caenorhabditis elegans GN=C28H8.4 PE=3 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 9.5e-18
Identity = 72/227 (31.72%), Postives = 113/227 (49.78%), Query Frame = 1


Query: 47  NLF-VVAEAVHSIGISVLIYKFTKERTCAGISLKSQELTAIFLAVR---LYCSFVMEHDI 106
           N+F + A+  H + I +L+ K  K R+C+GIS +SQ L A+    R   L+ +++  +  
Sbjct: 2   NIFRISADMSHLLAIIILLLKIWKSRSCSGISARSQILFALVFTARYLDLFSTYISLY-- 61

Query: 107 HTLLDLATLATTL------------------------WVIAPCAVLALLIHPSTSHHFVN 166
           +T + +  LA T                          +I P A+LALLI    +H F  
Sbjct: 62  NTTMKITFLAATYATVYLMFFKFRSTYMRESDTFRVELLIVPAAILALLI----NHDFAP 121

Query: 167 -RVFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGIARFLSCAHWVLQVLDSRG 226
             + W F +YLEAV++LPQL ++Q+T   E  TAHY+FALG  R L   +W+ +      
Sbjct: 122 FELLWTFSIYLEAVAILPQLFLLQSTGSAEVITAHYLFALGSYRALYIFNWIYRYYTE-- 181

Query: 227 HLLVALGYGLWPSMVLISEIVQTFILADFCYYYVKSVLGGQLVLRLP 245
                     +  +V+++ IVQT + ADF Y YV  V+  +  + LP
Sbjct: 182 --------DYFDPIVVVAGIVQTVLYADFFYLYVTRVVQTRKGMELP 212

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BLAST of Lsi10G004600 vs. Swiss-Prot
Match: ERD21_RAT (ER lumen protein-retaining receptor 1 OS=Rattus norvegicus GN=Kdelr1 PE=2 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 2.1e-17
Identity = 72/226 (31.86%), Postives = 114/226 (50.44%), Query Frame = 1


Query: 47  NLF-VVAEAVHSIGISVLIYKFTKERTCAGISLKSQELTAIFLAVR---LYCSFV-MEHD 106
           NLF  + +  H + I +L+ K  K R+CAGIS KSQ L A+    R   L+ +++ + + 
Sbjct: 2   NLFRFLGDLSHLLAIILLLLKIWKSRSCAGISGKSQVLFAVVFTARYLDLFTNYISLYNT 61

Query: 107 IHTLLDLATLATTLWVI---------------------APCAVLALLIHPSTSHHFVN-R 166
              ++ +A   TT+W+I                      P AVLA L+    +H F    
Sbjct: 62  CMKVVYIACSFTTVWMIYSKFKATYDGNHDTFRVEFLVVPTAVLAFLV----NHDFTPLE 121

Query: 167 VFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGIARFLSCAHWVLQVLDSRGHL 226
           + W F +YLE+V++LPQL ++  T   E  T+HY+FALG+ R L   +W+      R H 
Sbjct: 122 ILWTFSIYLESVAILPQLFMVSKTGEAETITSHYLFALGVYRTLYLFNWIW-----RYHF 181

Query: 227 LVALGYGLWPSMVLISEIVQTFILADFCYYYVKSVLGGQLVLRLPS 246
                 G +  + +++ +VQT +  DF Y Y+  VL G+  L LP+
Sbjct: 182 -----EGFFDLIAIVAGLVQTVLYCDFFYLYITKVLKGK-KLSLPA 212

[Close]

BLAST of Lsi10G004600 vs. Swiss-Prot
Match: ERD21_HUMAN (ER lumen protein-retaining receptor 1 OS=Homo sapiens GN=KDELR1 PE=1 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.8e-17
Identity = 71/226 (31.42%), Postives = 114/226 (50.44%), Query Frame = 1


Query: 47  NLF-VVAEAVHSIGISVLIYKFTKERTCAGISLKSQELTAIFLAVR---LYCSFV-MEHD 106
           NLF  + +  H + I +L+ K  K R+CAGIS KSQ L A+    R   L+ +++ + + 
Sbjct: 2   NLFRFLGDLSHLLAIILLLLKIWKSRSCAGISGKSQVLFAVVFTARYLDLFTNYISLYNT 61

Query: 107 IHTLLDLATLATTLWVI---------------------APCAVLALLIHPSTSHHFVN-R 166
              ++ +A   TT+W+I                      P A+LA L+    +H F    
Sbjct: 62  CMKVVYIACSFTTVWLIYSKFKATYDGNHDTFRVEFLVVPTAILAFLV----NHDFTPLE 121

Query: 167 VFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGIARFLSCAHWVLQVLDSRGHL 226
           + W F +YLE+V++LPQL ++  T   E  T+HY+FALG+ R L   +W+      R H 
Sbjct: 122 ILWTFSIYLESVAILPQLFMVSKTGEAETITSHYLFALGVYRTLYLFNWIW-----RYHF 181

Query: 227 LVALGYGLWPSMVLISEIVQTFILADFCYYYVKSVLGGQLVLRLPS 246
                 G +  + +++ +VQT +  DF Y Y+  VL G+  L LP+
Sbjct: 182 -----EGFFDLIAIVAGLVQTVLYCDFFYLYITKVLKGK-KLSLPA 212

[Close]

BLAST of Lsi10G004600 vs. Swiss-Prot
Match: ERD21_MOUSE (ER lumen protein-retaining receptor 1 OS=Mus musculus GN=Kdelr1 PE=1 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.8e-17
Identity = 71/226 (31.42%), Postives = 114/226 (50.44%), Query Frame = 1


Query: 47  NLF-VVAEAVHSIGISVLIYKFTKERTCAGISLKSQELTAIFLAVR---LYCSFV-MEHD 106
           NLF  + +  H + I +L+ K  K R+CAGIS KSQ L A+    R   L+ +++ + + 
Sbjct: 2   NLFRFLGDLSHLLAIILLLLKIWKSRSCAGISGKSQVLFAVVFTARYLDLFTNYISLYNT 61

Query: 107 IHTLLDLATLATTLWVI---------------------APCAVLALLIHPSTSHHFVN-R 166
              ++ +A   TT+W+I                      P A+LA L+    +H F    
Sbjct: 62  CMKVVYIACSFTTVWMIYSKFKATYDGNHDTFRVEFLVVPTAILAFLV----NHDFTPLE 121

Query: 167 VFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGIARFLSCAHWVLQVLDSRGHL 226
           + W F +YLE+V++LPQL ++  T   E  T+HY+FALG+ R L   +W+      R H 
Sbjct: 122 ILWTFSIYLESVAILPQLFMVSKTGEAETITSHYLFALGVYRTLYLFNWIW-----RYHF 181

Query: 227 LVALGYGLWPSMVLISEIVQTFILADFCYYYVKSVLGGQLVLRLPS 246
                 G +  + +++ +VQT +  DF Y Y+  VL G+  L LP+
Sbjct: 182 -----EGFFDLIAIVAGLVQTVLYCDFFYLYITKVLKGK-KLSLPA 212

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BLAST of Lsi10G004600 vs. TrEMBL
Match: A0A0A0LPJ8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G263860 PE=4 SV=1)

HSP 1 Score: 451.4 bits (1160), Expect = 6.9e-124
Identity = 235/272 (86.40%), Postives = 240/272 (88.24%), Query Frame = 1


Query: 1   MRPARNLIHIVSVWVRRQPPKVKAFLAVVLGMVALVALRFIVHDHDNLFVVAEAVHSIGI 60
           MRPARN IHI SVWVRRQPPKVKAF+AVVLGM+ LV LRFIVHDHDNLFV AEA+HSIGI
Sbjct: 1   MRPARNPIHIASVWVRRQPPKVKAFMAVVLGMLTLVVLRFIVHDHDNLFVAAEALHSIGI 60

Query: 61  SVLIYKFTKERTCAGISLKSQELTAIFLAVRLYCSFVMEHDIHTLLDLATLATTLW---- 120
            VLIYK TKERTCAG+SLKSQELTAIFLAVRLYCSFVME DIHTLLDLATLATTLW    
Sbjct: 61  LVLIYKLTKERTCAGLSLKSQELTAIFLAVRLYCSFVMEFDIHTLLDLATLATTLWVIYM 120

Query: 121 --------------------VIAPCAVLALLIHPSTSHHFVNRVFWAFCVYLEAVSVLPQ 180
                               VIAPCAVLALLIHPSTSHHFVNRVFWAFCVYLEAVSVLPQ
Sbjct: 121 IRFKLKSSYMEDKDNFALYYVIAPCAVLALLIHPSTSHHFVNRVFWAFCVYLEAVSVLPQ 180

Query: 181 LRVMQNTKIVEPFTAHYVFALGIARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISE 240
           LRVMQNTKIVEPFTAHYVFALGIARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISE
Sbjct: 181 LRVMQNTKIVEPFTAHYVFALGIARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISE 240

Query: 241 IVQTFILADFCYYYVKSVLGGQLVLRLPSGVV 249
           IVQTFILADFCYYYVKSVLGGQLV+RLPSGVV
Sbjct: 241 IVQTFILADFCYYYVKSVLGGQLVIRLPSGVV 272

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BLAST of Lsi10G004600 vs. TrEMBL
Match: A0A061DYD8_THECC (ER lumen protein retaining receptor family protein isoform 2 OS=Theobroma cacao GN=TCM_006700 PE=4 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 1.0e-119
Identity = 227/271 (83.76%), Postives = 236/271 (87.08%), Query Frame = 1


Query: 1   MRPARNLIHIVSVWVRRQPPKVKAFLAVVLGMVALVALRFIVHDHDNLFVVAEAVHSIGI 60
           MR  R  IH VS+WVRRQPPKVKAFLAVV GM ALV LRFIVHDHDNLFV AEAVHSIGI
Sbjct: 1   MRAQRRPIHAVSMWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGI 60

Query: 61  SVLIYKFTKERTCAGISLKSQELTAIFLAVRLYCSFVMEHDIHTLLDLATLATTLWVI-- 120
           SVLIYK TKE+TCAG+SLKSQELTAIFLAVRLYCSFVME+DIHTLLDLATLATTLWVI  
Sbjct: 61  SVLIYKLTKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDLATLATTLWVIYM 120

Query: 121 ---------------------APCAVLALLIHPSTSHHFVNRVFWAFCVYLEAVSVLPQL 180
                                APCAVLALLIHPSTSH+ +NR+FWAFCVYLEAVSVLPQL
Sbjct: 121 IRFKLKSSYMEDKDNFAIYYVAPCAVLALLIHPSTSHNLLNRIFWAFCVYLEAVSVLPQL 180

Query: 181 RVMQNTKIVEPFTAHYVFALGIARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISEI 240
           RVMQNTKIVEPFTAHYVFALG+ARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISEI
Sbjct: 181 RVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISEI 240

Query: 241 VQTFILADFCYYYVKSVLGGQLVLRLPSGVV 249
           VQTFILADFCYYY+KSV GGQLVLRLPSGVV
Sbjct: 241 VQTFILADFCYYYIKSVFGGQLVLRLPSGVV 271

[Close]

BLAST of Lsi10G004600 vs. TrEMBL
Match: A0A061E699_THECC (ER lumen protein retaining receptor family protein isoform 1 OS=Theobroma cacao GN=TCM_006700 PE=4 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 1.3e-119
Identity = 227/272 (83.46%), Postives = 236/272 (86.76%), Query Frame = 1


Query: 1   MRPARNLIHIVSVWVRRQPPKVKAFLAVVLGMVALVALRFIVHDHDNLFVVAEAVHSIGI 60
           MR  R  IH VS+WVRRQPPKVKAFLAVV GM ALV LRFIVHDHDNLFV AEAVHSIGI
Sbjct: 1   MRAQRRPIHAVSMWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGI 60

Query: 61  SVLIYKFTKERTCAGISLKSQELTAIFLAVRLYCSFVMEHDIHTLLDLATLATTLWVI-- 120
           SVLIYK TKE+TCAG+SLKSQELTAIFLAVRLYCSFVME+DIHTLLDLATLATTLWVI  
Sbjct: 61  SVLIYKLTKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDLATLATTLWVIYM 120

Query: 121 ----------------------APCAVLALLIHPSTSHHFVNRVFWAFCVYLEAVSVLPQ 180
                                 APCAVLALLIHPSTSH+ +NR+FWAFCVYLEAVSVLPQ
Sbjct: 121 IRFKLKSSYMEDKDNFAIYYVVAPCAVLALLIHPSTSHNLLNRIFWAFCVYLEAVSVLPQ 180

Query: 181 LRVMQNTKIVEPFTAHYVFALGIARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISE 240
           LRVMQNTKIVEPFTAHYVFALG+ARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISE
Sbjct: 181 LRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISE 240

Query: 241 IVQTFILADFCYYYVKSVLGGQLVLRLPSGVV 249
           IVQTFILADFCYYY+KSV GGQLVLRLPSGVV
Sbjct: 241 IVQTFILADFCYYYIKSVFGGQLVLRLPSGVV 272

[Close]

BLAST of Lsi10G004600 vs. TrEMBL
Match: V4S8Q7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029042mg PE=4 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 4.3e-118
Identity = 225/272 (82.72%), Postives = 233/272 (85.66%), Query Frame = 1


Query: 1   MRPARNLIHIVSVWVRRQPPKVKAFLAVVLGMVALVALRFIVHDHDNLFVVAEAVHSIGI 60
           MR  +  IH VS WVRRQPPKVKAFLAVV GM ALV LRFIVHDHDNLFV AEAVHSIGI
Sbjct: 1   MRAPKRPIHAVSTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGI 60

Query: 61  SVLIYKFTKERTCAGISLKSQELTAIFLAVRLYCSFVMEHDIHTLLDLATLATTLWVI-- 120
           SVLIYK  KE+TCAG+SLKSQELTAIFLAVRLYCSFVME+DIHTLLDLATLATTLWVI  
Sbjct: 61  SVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDLATLATTLWVIYM 120

Query: 121 ----------------------APCAVLALLIHPSTSHHFVNRVFWAFCVYLEAVSVLPQ 180
                                  PCAVLALLIHPSTSH+ +NR+FWAFCVYLEAVSVLPQ
Sbjct: 121 IRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQ 180

Query: 181 LRVMQNTKIVEPFTAHYVFALGIARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISE 240
           LRVMQNTKIVEPFTAHYVFALG+ARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISE
Sbjct: 181 LRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISE 240

Query: 241 IVQTFILADFCYYYVKSVLGGQLVLRLPSGVV 249
           IVQTFILADFCYYYVKSV GGQLVLRLPSGVV
Sbjct: 241 IVQTFILADFCYYYVKSVFGGQLVLRLPSGVV 272

[Close]

BLAST of Lsi10G004600 vs. TrEMBL
Match: A0A067DRL3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024109mg PE=4 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 4.3e-118
Identity = 225/272 (82.72%), Postives = 233/272 (85.66%), Query Frame = 1


Query: 1   MRPARNLIHIVSVWVRRQPPKVKAFLAVVLGMVALVALRFIVHDHDNLFVVAEAVHSIGI 60
           MR  +  IH VS WVRRQPPKVKAFLAVV GM ALV LRFIVHDHDNLFV AEAVHSIGI
Sbjct: 1   MRAPKRPIHAVSTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGI 60

Query: 61  SVLIYKFTKERTCAGISLKSQELTAIFLAVRLYCSFVMEHDIHTLLDLATLATTLWVI-- 120
           SVLIYK  KE+TCAG+SLKSQELTAIFLAVRLYCSFVME+DIHTLLDLATLATTLWVI  
Sbjct: 61  SVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDLATLATTLWVIYM 120

Query: 121 ----------------------APCAVLALLIHPSTSHHFVNRVFWAFCVYLEAVSVLPQ 180
                                  PCAVLALLIHPSTSH+ +NR+FWAFCVYLEAVSVLPQ
Sbjct: 121 IRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQ 180

Query: 181 LRVMQNTKIVEPFTAHYVFALGIARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISE 240
           LRVMQNTKIVEPFTAHYVFALG+ARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISE
Sbjct: 181 LRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISE 240

Query: 241 IVQTFILADFCYYYVKSVLGGQLVLRLPSGVV 249
           IVQTFILADFCYYYVKSV GGQLVLRLPSGVV
Sbjct: 241 IVQTFILADFCYYYVKSVFGGQLVLRLPSGVV 272

[Close]

BLAST of Lsi10G004600 vs. TAIR10
Match: AT4G38790.1 (AT4G38790.1 ER lumen protein retaining receptor family protein)

HSP 1 Score: 407.1 bits (1045), Expect = 7.6e-114
Identity = 210/265 (79.25%), Postives = 222/265 (83.77%), Query Frame = 1


Query: 8   IHIVSVWVRRQPPKVKAFLAVVLGMVALVALRFIVHDHDNLFVVAEAVHSIGISVLIYKF 67
           IH+V  WVRRQPPKVKAFLAVV GM ALV LRFIVHDHDNLFV AEAVHSIGI VLIYK 
Sbjct: 9   IHVVWSWVRRQPPKVKAFLAVVTGMAALVLLRFIVHDHDNLFVAAEAVHSIGICVLIYKL 68

Query: 68  TKERTCAGISLKSQELTAIFLAVRLYCSFVMEHDIHTLLDLATLATTLWVI--------- 127
            KE+TCAG+SLKSQELTAIFLAVRLYCS VME+DIHT+LDLATL TTLWVI         
Sbjct: 69  MKEKTCAGLSLKSQELTAIFLAVRLYCSIVMEYDIHTILDLATLGTTLWVIFMIRFKLRA 128

Query: 128 ---------------APCAVLALLIHPSTSHHFVNRVFWAFCVYLEAVSVLPQLRVMQNT 187
                          APC  LA+ IHPSTSH+ +NR+ WA CVYLEAVSVLPQLRVMQNT
Sbjct: 129 SYMEDKDNFPLYYVLAPCVALAVFIHPSTSHNIINRISWALCVYLEAVSVLPQLRVMQNT 188

Query: 188 KIVEPFTAHYVFALGIARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISEIVQTFIL 247
           KIVEPFTAHYVFALG+ARFLSCAHWVLQV+D+RG LLVALGYGLWPSMVLISEIVQTFIL
Sbjct: 189 KIVEPFTAHYVFALGVARFLSCAHWVLQVVDTRGRLLVALGYGLWPSMVLISEIVQTFIL 248

Query: 248 ADFCYYYVKSVLGGQLVLRLPSGVV 249
           ADFCYYYVKSV GGQLVLRLPSGVV
Sbjct: 249 ADFCYYYVKSVFGGQLVLRLPSGVV 273

[Close]

BLAST of Lsi10G004600 vs. TAIR10
Match: AT2G21190.1 (AT2G21190.1 ER lumen protein retaining receptor family protein)

HSP 1 Score: 403.7 bits (1036), Expect = 8.4e-113
Identity = 207/265 (78.11%), Postives = 221/265 (83.40%), Query Frame = 1


Query: 8   IHIVSVWVRRQPPKVKAFLAVVLGMVALVALRFIVHDHDNLFVVAEAVHSIGISVLIYKF 67
           IH VS WVRRQPPKVKAFLAVV GM ALV L+ IVHDHDNLFV AEAVHSIGISVLIYK 
Sbjct: 5   IHAVSTWVRRQPPKVKAFLAVVSGMAALVLLKLIVHDHDNLFVAAEAVHSIGISVLIYKL 64

Query: 68  TKERTCAGISLKSQELTAIFLAVRLYCSFVMEHDIHTLLDLATLATTLWVI--------- 127
            KE+TCAG+SLKSQELTAIFLAVRLYCSFVME+DIHT+LDLATL TTLWVI         
Sbjct: 65  MKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTILDLATLGTTLWVIYMIRFNLKT 124

Query: 128 ---------------APCAVLALLIHPSTSHHFVNRVFWAFCVYLEAVSVLPQLRVMQNT 187
                          APC VLA+ IHPSTSH+ +NR+ W FCVYLEAVSVLPQLRVMQNT
Sbjct: 125 TYMEEKDNFALYYVLAPCVVLAVWIHPSTSHNILNRISWGFCVYLEAVSVLPQLRVMQNT 184

Query: 188 KIVEPFTAHYVFALGIARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISEIVQTFIL 247
           KIVEPFTAHYVFALG+ARF SCAHWVLQ++D+ G LLV LGYGLWPSMV+ISEIVQTFIL
Sbjct: 185 KIVEPFTAHYVFALGVARFFSCAHWVLQMMDTHGRLLVVLGYGLWPSMVIISEIVQTFIL 244

Query: 248 ADFCYYYVKSVLGGQLVLRLPSGVV 249
           ADFCYYYVKSV GGQLVLRLPSGVV
Sbjct: 245 ADFCYYYVKSVFGGQLVLRLPSGVV 269

[Close]

BLAST of Lsi10G004600 vs. TAIR10
Match: AT1G75760.1 (AT1G75760.1 ER lumen protein retaining receptor family protein)

HSP 1 Score: 398.3 bits (1022), Expect = 3.5e-111
Identity = 205/272 (75.37%), Postives = 221/272 (81.25%), Query Frame = 1


Query: 1   MRPARNLIHIVSVWVRRQPPKVKAFLAVVLGMVALVALRFIVHDHDNLFVVAEAVHSIGI 60
           M+ A   IH V+ WVRRQPPKVK FL VV  M ALV LR IVHDHDNLFV AEAVHS+GI
Sbjct: 1   MKAATRPIHAVTTWVRRQPPKVKGFLGVVSAMTALVLLRVIVHDHDNLFVAAEAVHSLGI 60

Query: 61  SVLIYKFTKERTCAGISLKSQELTAIFLAVRLYCSFVMEHDIHTLLDLATLATTL----- 120
           SVLIYK TKERTCAG+SLKSQELTA+FLAVRLYCSFVME DIHTLLD ATL TTL     
Sbjct: 61  SVLIYKLTKERTCAGLSLKSQELTALFLAVRLYCSFVMEFDIHTLLDSATLVTTLFVIYM 120

Query: 121 -------------------WVIAPCAVLALLIHPSTSHHFVNRVFWAFCVYLEAVSVLPQ 180
                              +V+ PC VL++LIHPST HH +N++ WAFCVYLEAVSVLPQ
Sbjct: 121 IRFKLKASYMDDKDNFAIYYVVIPCVVLSVLIHPSTHHHIINKISWAFCVYLEAVSVLPQ 180

Query: 181 LRVMQNTKIVEPFTAHYVFALGIARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISE 240
           LRVMQNTKIVEPFTAHYVFALGIARFLSCAHWVLQVLD+RG LL ALGYG WP MVL+SE
Sbjct: 181 LRVMQNTKIVEPFTAHYVFALGIARFLSCAHWVLQVLDTRGRLLTALGYGFWPIMVLLSE 240

Query: 241 IVQTFILADFCYYYVKSVLGGQLVLRLPSGVV 249
           IVQTFILADFCYYYVKS++GGQLVLRLPSGVV
Sbjct: 241 IVQTFILADFCYYYVKSLMGGQLVLRLPSGVV 272

[Close]

BLAST of Lsi10G004600 vs. TAIR10
Match: AT1G19970.1 (AT1G19970.1 ER lumen protein retaining receptor family protein)

HSP 1 Score: 388.3 bits (996), Expect = 3.6e-108
Identity = 197/272 (72.43%), Postives = 218/272 (80.15%), Query Frame = 1


Query: 1   MRPARNLIHIVSVWVRRQPPKVKAFLAVVLGMVALVALRFIVHDHDNLFVVAEAVHSIGI 60
           M+  +N I  V  W+RRQPPKVKAFL VV  M  LV LR IVH+HDNLFV +EAVH++GI
Sbjct: 1   MKAEKNPIQSVMAWIRRQPPKVKAFLGVVTAMTVLVLLRVIVHEHDNLFVASEAVHAVGI 60

Query: 61  SVLIYKFTKERTCAGISLKSQELTAIFLAVRLYCSFVMEHDIHTLLDLATLATTLW---- 120
           +VLIYK TKE+TCAGISLK+QELTA+FLAVRLYCSFVME D+HT LD ATL TTLW    
Sbjct: 61  AVLIYKLTKEKTCAGISLKTQELTALFLAVRLYCSFVMEFDLHTFLDSATLVTTLWVVYM 120

Query: 121 --------------------VIAPCAVLALLIHPSTSHHFVNRVFWAFCVYLEAVSVLPQ 180
                               V+ PCAVL+  IHPST HH +NR+ WAFCVYLEAVSVLPQ
Sbjct: 121 IRFKLRPTYMEDKDNFAIYFVVIPCAVLSFFIHPSTRHHIINRISWAFCVYLEAVSVLPQ 180

Query: 181 LRVMQNTKIVEPFTAHYVFALGIARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISE 240
           LRVMQNTKIVEPFTAHYVFALGIARFLSCAHW+LQVLD+RG LL ALG GLWP MVLISE
Sbjct: 181 LRVMQNTKIVEPFTAHYVFALGIARFLSCAHWILQVLDTRGRLLTALGSGLWPVMVLISE 240

Query: 241 IVQTFILADFCYYYVKSVLGGQLVLRLPSGVV 249
           IVQTFILADFCYYYV+S++GGQLVLRLPSGVV
Sbjct: 241 IVQTFILADFCYYYVQSLMGGQLVLRLPSGVV 272

[Close]

BLAST of Lsi10G004600 vs. TAIR10
Match: AT3G25160.1 (AT3G25160.1 ER lumen protein retaining receptor family protein)

HSP 1 Score: 296.2 bits (757), Expect = 1.9e-80
Identity = 146/262 (55.73%), Postives = 197/262 (75.19%), Query Frame = 1


Query: 8   IHIVSVWVRRQPPKVKAFLAVVLGMVALVALRFIVHDHDNLFVVAEAVHSIGISVLIYKF 67
           +++V  W+R+Q  KVK  L +++ ++ +V L+F V +H++ F+ +E +H+ GI +LIYK 
Sbjct: 10  VNVVFGWLRQQSNKVKIALGIIISLILVVLLKFTVRNHNHFFIASELIHAAGILILIYKL 69

Query: 68  TKERTCAGISLKSQELTAIFLAVRLYCSFVMEHDIHTLLDLATLATTLWVI--------- 127
           T+++TC+G+SLKSQE+TAIFLAVRL CS  ME DIHT+LD ATL +TLWVI         
Sbjct: 70  TRQKTCSGLSLKSQEVTAIFLAVRLICSINMEGDIHTVLDFATLVSTLWVIYMIRYKLKA 129

Query: 128 ---------------APCAVLALLIHPSTSHHFVNRVFWAFCVYLEAVSVLPQLRVMQNT 187
                           P A+LAL+I+PSTS+ + +R+ WAFCVY E+VSVLPQLR+MQN 
Sbjct: 130 SYIKSLDTCYNYYVLVPSAILALIINPSTSYSYFHRILWAFCVYTESVSVLPQLRLMQNA 189

Query: 188 KIVEPFTAHYVFALGIARFLSCAHWVLQVLDSRGHLLVALGYG-LWPSMVLISEIVQTFI 245
           +I+EPFTAHYVFALGIARFL+CAHW++QV+++RGH L  LG G  W  + L++EIVQTFI
Sbjct: 190 QIIEPFTAHYVFALGIARFLACAHWIIQVVETRGHYLWLLGAGYFWFPVALLAEIVQTFI 249

[Close]

BLAST of Lsi10G004600 vs. NCBI nr
Match: gi|659115613|ref|XP_008457643.1| (PREDICTED: putative ER lumen protein-retaining receptor C28H8.4 isoform X2 [Cucumis melo])

HSP 1 Score: 454.5 bits (1168), Expect = 1.2e-124
Identity = 237/272 (87.13%), Postives = 241/272 (88.60%), Query Frame = 1


Query: 1   MRPARNLIHIVSVWVRRQPPKVKAFLAVVLGMVALVALRFIVHDHDNLFVVAEAVHSIGI 60
           MRPARN IHIVSVWVRRQPPKVKAF+AVVLGM+ LV LRFIVHDHDNLFV AEA+HSIGI
Sbjct: 1   MRPARNPIHIVSVWVRRQPPKVKAFMAVVLGMLTLVVLRFIVHDHDNLFVAAEALHSIGI 60

Query: 61  SVLIYKFTKERTCAGISLKSQELTAIFLAVRLYCSFVMEHDIHTLLDLATLATTLW---- 120
           SVLIYK TKERTCAG+SLKSQELTAIFLAVRLYCSFVME DIHTLLDLATLATTLW    
Sbjct: 61  SVLIYKLTKERTCAGLSLKSQELTAIFLAVRLYCSFVMEFDIHTLLDLATLATTLWVIYM 120

Query: 121 --------------------VIAPCAVLALLIHPSTSHHFVNRVFWAFCVYLEAVSVLPQ 180
                               VI PCAVLALLIHPSTSHHFVNRVFWAFCVYLEAVSVLPQ
Sbjct: 121 IRFKLKSSYMEDKDNFALYYVIVPCAVLALLIHPSTSHHFVNRVFWAFCVYLEAVSVLPQ 180

Query: 181 LRVMQNTKIVEPFTAHYVFALGIARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISE 240
           LRVMQNTKIVEPFTAHYVFALGIARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISE
Sbjct: 181 LRVMQNTKIVEPFTAHYVFALGIARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISE 240

Query: 241 IVQTFILADFCYYYVKSVLGGQLVLRLPSGVV 249
           IVQTFILADFCYYYVKSVLGGQLVLRLPSGVV
Sbjct: 241 IVQTFILADFCYYYVKSVLGGQLVLRLPSGVV 272

[Close]

BLAST of Lsi10G004600 vs. NCBI nr
Match: gi|449464706|ref|XP_004150070.1| (PREDICTED: putative ER lumen protein-retaining receptor C28H8.4 [Cucumis sativus])

HSP 1 Score: 451.4 bits (1160), Expect = 9.9e-124
Identity = 235/272 (86.40%), Postives = 240/272 (88.24%), Query Frame = 1


Query: 1   MRPARNLIHIVSVWVRRQPPKVKAFLAVVLGMVALVALRFIVHDHDNLFVVAEAVHSIGI 60
           MRPARN IHI SVWVRRQPPKVKAF+AVVLGM+ LV LRFIVHDHDNLFV AEA+HSIGI
Sbjct: 1   MRPARNPIHIASVWVRRQPPKVKAFMAVVLGMLTLVVLRFIVHDHDNLFVAAEALHSIGI 60

Query: 61  SVLIYKFTKERTCAGISLKSQELTAIFLAVRLYCSFVMEHDIHTLLDLATLATTLW---- 120
            VLIYK TKERTCAG+SLKSQELTAIFLAVRLYCSFVME DIHTLLDLATLATTLW    
Sbjct: 61  LVLIYKLTKERTCAGLSLKSQELTAIFLAVRLYCSFVMEFDIHTLLDLATLATTLWVIYM 120

Query: 121 --------------------VIAPCAVLALLIHPSTSHHFVNRVFWAFCVYLEAVSVLPQ 180
                               VIAPCAVLALLIHPSTSHHFVNRVFWAFCVYLEAVSVLPQ
Sbjct: 121 IRFKLKSSYMEDKDNFALYYVIAPCAVLALLIHPSTSHHFVNRVFWAFCVYLEAVSVLPQ 180

Query: 181 LRVMQNTKIVEPFTAHYVFALGIARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISE 240
           LRVMQNTKIVEPFTAHYVFALGIARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISE
Sbjct: 181 LRVMQNTKIVEPFTAHYVFALGIARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISE 240

Query: 241 IVQTFILADFCYYYVKSVLGGQLVLRLPSGVV 249
           IVQTFILADFCYYYVKSVLGGQLV+RLPSGVV
Sbjct: 241 IVQTFILADFCYYYVKSVLGGQLVIRLPSGVV 272

[Close]

BLAST of Lsi10G004600 vs. NCBI nr
Match: gi|590684823|ref|XP_007041943.1| (ER lumen protein retaining receptor family protein isoform 2 [Theobroma cacao])

HSP 1 Score: 437.6 bits (1124), Expect = 1.5e-119
Identity = 227/271 (83.76%), Postives = 236/271 (87.08%), Query Frame = 1


Query: 1   MRPARNLIHIVSVWVRRQPPKVKAFLAVVLGMVALVALRFIVHDHDNLFVVAEAVHSIGI 60
           MR  R  IH VS+WVRRQPPKVKAFLAVV GM ALV LRFIVHDHDNLFV AEAVHSIGI
Sbjct: 1   MRAQRRPIHAVSMWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGI 60

Query: 61  SVLIYKFTKERTCAGISLKSQELTAIFLAVRLYCSFVMEHDIHTLLDLATLATTLWVI-- 120
           SVLIYK TKE+TCAG+SLKSQELTAIFLAVRLYCSFVME+DIHTLLDLATLATTLWVI  
Sbjct: 61  SVLIYKLTKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDLATLATTLWVIYM 120

Query: 121 ---------------------APCAVLALLIHPSTSHHFVNRVFWAFCVYLEAVSVLPQL 180
                                APCAVLALLIHPSTSH+ +NR+FWAFCVYLEAVSVLPQL
Sbjct: 121 IRFKLKSSYMEDKDNFAIYYVAPCAVLALLIHPSTSHNLLNRIFWAFCVYLEAVSVLPQL 180

Query: 181 RVMQNTKIVEPFTAHYVFALGIARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISEI 240
           RVMQNTKIVEPFTAHYVFALG+ARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISEI
Sbjct: 181 RVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISEI 240

Query: 241 VQTFILADFCYYYVKSVLGGQLVLRLPSGVV 249
           VQTFILADFCYYY+KSV GGQLVLRLPSGVV
Sbjct: 241 VQTFILADFCYYYIKSVFGGQLVLRLPSGVV 271

[Close]

BLAST of Lsi10G004600 vs. NCBI nr
Match: gi|590684820|ref|XP_007041942.1| (ER lumen protein retaining receptor family protein isoform 1 [Theobroma cacao])

HSP 1 Score: 437.2 bits (1123), Expect = 1.9e-119
Identity = 227/272 (83.46%), Postives = 236/272 (86.76%), Query Frame = 1


Query: 1   MRPARNLIHIVSVWVRRQPPKVKAFLAVVLGMVALVALRFIVHDHDNLFVVAEAVHSIGI 60
           MR  R  IH VS+WVRRQPPKVKAFLAVV GM ALV LRFIVHDHDNLFV AEAVHSIGI
Sbjct: 1   MRAQRRPIHAVSMWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGI 60

Query: 61  SVLIYKFTKERTCAGISLKSQELTAIFLAVRLYCSFVMEHDIHTLLDLATLATTLWVI-- 120
           SVLIYK TKE+TCAG+SLKSQELTAIFLAVRLYCSFVME+DIHTLLDLATLATTLWVI  
Sbjct: 61  SVLIYKLTKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDLATLATTLWVIYM 120

Query: 121 ----------------------APCAVLALLIHPSTSHHFVNRVFWAFCVYLEAVSVLPQ 180
                                 APCAVLALLIHPSTSH+ +NR+FWAFCVYLEAVSVLPQ
Sbjct: 121 IRFKLKSSYMEDKDNFAIYYVVAPCAVLALLIHPSTSHNLLNRIFWAFCVYLEAVSVLPQ 180

Query: 181 LRVMQNTKIVEPFTAHYVFALGIARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISE 240
           LRVMQNTKIVEPFTAHYVFALG+ARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISE
Sbjct: 181 LRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISE 240

Query: 241 IVQTFILADFCYYYVKSVLGGQLVLRLPSGVV 249
           IVQTFILADFCYYY+KSV GGQLVLRLPSGVV
Sbjct: 241 IVQTFILADFCYYYIKSVFGGQLVLRLPSGVV 272

[Close]

BLAST of Lsi10G004600 vs. NCBI nr
Match: gi|1012215349|ref|XP_015934283.1| (PREDICTED: putative ER lumen protein-retaining receptor C28H8.4 [Arachis duranensis])

HSP 1 Score: 433.0 bits (1112), Expect = 3.6e-118
Identity = 222/272 (81.62%), Postives = 233/272 (85.66%), Query Frame = 1


Query: 1   MRPARNLIHIVSVWVRRQPPKVKAFLAVVLGMVALVALRFIVHDHDNLFVVAEAVHSIGI 60
           MRP +  IH V+ WVRRQPPKVKAFLAVV GM ALV LRFIVHDHDNLFV AEAVHS+GI
Sbjct: 1   MRPPKKSIHAVTTWVRRQPPKVKAFLAVVSGMAALVFLRFIVHDHDNLFVAAEAVHSLGI 60

Query: 61  SVLIYKFTKERTCAGISLKSQELTAIFLAVRLYCSFVMEHDIHTLLDLATLATTLWVI-- 120
           SVLIYK TKE+TCAG+SLKSQELTA+FLAVRLYCSFVME+DIHT+LDLATL TTLWVI  
Sbjct: 61  SVLIYKLTKEKTCAGLSLKSQELTAMFLAVRLYCSFVMEYDIHTILDLATLGTTLWVIYM 120

Query: 121 ----------------------APCAVLALLIHPSTSHHFVNRVFWAFCVYLEAVSVLPQ 180
                                  PCAVLAL IHPSTSHH +NR+FWAFCVYLEAVSVLPQ
Sbjct: 121 IRFNLRSSYMEEKDNFAIYYVVIPCAVLALFIHPSTSHHLLNRIFWAFCVYLEAVSVLPQ 180

Query: 181 LRVMQNTKIVEPFTAHYVFALGIARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISE 240
           LRVMQNTKIVEPFTAHYVFALG+ARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISE
Sbjct: 181 LRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISE 240

Query: 241 IVQTFILADFCYYYVKSVLGGQLVLRLPSGVV 249
           IVQTFILADFCYYYVKSV GGQLVLRLPSGVV
Sbjct: 241 IVQTFILADFCYYYVKSVFGGQLVLRLPSGVV 272

The following BLAST results are available for this feature:

BLAST of Lsi10G004600 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ERD2_DROME	6.6e-19	33.63	ER lumen protein-retaining receptor OS=Drosophila melanogaster GN=KdelR PE=2 SV=...	[more]
ERD22_CAEEL	9.5e-18	31.72	Putative ER lumen protein-retaining receptor C28H8.4 OS=Caenorhabditis elegans G...	[more]
ERD21_RAT	2.1e-17	31.86	ER lumen protein-retaining receptor 1 OS=Rattus norvegicus GN=Kdelr1 PE=2 SV=1	[more]
ERD21_HUMAN	2.8e-17	31.42	ER lumen protein-retaining receptor 1 OS=Homo sapiens GN=KDELR1 PE=1 SV=1	[more]
ERD21_MOUSE	2.8e-17	31.42	ER lumen protein-retaining receptor 1 OS=Mus musculus GN=Kdelr1 PE=1 SV=1	[more]

BLAST of Lsi10G004600 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPJ8_CUCSA	6.9e-124	86.40	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G263860 PE=4 SV=1	[more]
A0A061DYD8_THECC	1.0e-119	83.76	ER lumen protein retaining receptor family protein isoform 2 OS=Theobroma cacao ...	[more]
A0A061E699_THECC	1.3e-119	83.46	ER lumen protein retaining receptor family protein isoform 1 OS=Theobroma cacao ...	[more]
V4S8Q7_9ROSI	4.3e-118	82.72	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029042mg PE=4 SV=1	[more]
A0A067DRL3_CITSI	4.3e-118	82.72	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024109mg PE=4 SV=1	[more]

BLAST of Lsi10G004600 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G38790.1	7.6e-114	79.25	ER lumen protein retaining receptor family protein	[more]
AT2G21190.1	8.4e-113	78.11	ER lumen protein retaining receptor family protein	[more]
AT1G75760.1	3.5e-111	75.37	ER lumen protein retaining receptor family protein	[more]
AT1G19970.1	3.6e-108	72.43	ER lumen protein retaining receptor family protein	[more]
AT3G25160.1	1.9e-80	55.73	ER lumen protein retaining receptor family protein	[more]

BLAST of Lsi10G004600 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659115613\|ref\|XP_008457643.1\|	1.2e-124	87.13	PREDICTED: putative ER lumen protein-retaining receptor C28H8.4 isoform X2 [Cucu...	[more]
gi\|449464706\|ref\|XP_004150070.1\|	9.9e-124	86.40	PREDICTED: putative ER lumen protein-retaining receptor C28H8.4 [Cucumis sativus...	[more]
gi\|590684823\|ref\|XP_007041943.1\|	1.5e-119	83.76	ER lumen protein retaining receptor family protein isoform 2 [Theobroma cacao]	[more]
gi\|590684820\|ref\|XP_007041942.1\|	1.9e-119	83.46	ER lumen protein retaining receptor family protein isoform 1 [Theobroma cacao]	[more]
gi\|1012215349\|ref\|XP_015934283.1\|	3.6e-118	81.62	PREDICTED: putative ER lumen protein-retaining receptor C28H8.4 [Arachis duranen...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0046923	ER retention sequence binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0006621	protein retention in ER lumen

Vocabulary: **INTERPRO**
Term	Definition
IPR000133	ER_ret_rcpt

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006621	protein retention in ER lumen
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046923	ER retention sequence binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi10G004600.1	Lsi10G004600.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000133	ER lumen protein retaining receptor	PRINTS	PR00660	ERLUMENR	coord: 48..67 score: 7.3E-6coord: 216..231 score: 7.3E-6coord: 75..95 score: 7.
IPR000133	ER lumen protein retaining receptor	PANTHER	PTHR10585	ER LUMEN PROTEIN RETAINING RECEPTOR	coord: 45..247 score: 5.0E
IPR000133	ER lumen protein retaining receptor	PFAM	PF00810	ER_lumen_recept	coord: 116..190 score: 2.1
None	No IPR available	PANTHER	PTHR10585:SF34	ER LUMEN PROTEIN RETAINING RECEPTOR-LIKE PROTEIN	coord: 45..247 score: 5.0E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi10G004600	Csa2G263860	Cucumber (Chinese Long) v2	culsiB093
Lsi10G004600	CSPI02G13090	Wild cucumber (PI 183967)	cpilsiB091
Lsi10G004600	Cucsa.169280	Cucumber (Gy14) v1	cgylsiB281
Lsi10G004600	CmaCh20G007720	Cucurbita maxima (Rimu)	cmalsiB507
Lsi10G004600	CmaCh02G003320	Cucurbita maxima (Rimu)	cmalsiB548
Lsi10G004600	CmoCh02G003290	Cucurbita moschata (Rifu)	cmolsiB533
Lsi10G004600	Cla001668	Watermelon (97103) v1	lsiwmB083
Lsi10G004600	MELO3C020775	Melon (DHL92) v3.5.1	lsimeB054
Lsi10G004600	ClCG02G011440	Watermelon (Charleston Gray)	lsiwcgB062
Lsi10G004600	MELO3C020775.2	Melon (DHL92) v3.6.1	lsimedB056
Lsi10G004600	Cla97C02G037140	Watermelon (97103) v2	lsiwmbB061
Lsi10G004600	Bhi10G001510	Wax gourd	lsiwgoB080
Lsi10G004600	Cp4.1LG16g02870	Cucurbita pepo (Zucchini)	cpelsiB220
Lsi10G004600	Cp4.1LG02g08040	Cucurbita pepo (Zucchini)	cpelsiB436
Lsi10G004600	Cp4.1LG05g13150	Cucurbita pepo (Zucchini)	cpelsiB589
Lsi10G004600	CsGy2G013060	Cucumber (Gy14) v2	cgyblsiB086
Lsi10G004600	Carg19803	Silver-seed gourd	carlsiB777
Lsi10G004600	Carg16196	Silver-seed gourd	carlsiB314
Lsi10G004600	CsaV3_2G015650	Cucumber (Chinese Long) v3	cuclsiB104

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi10G004600	Silver-seed gourd	carlsiB289
Lsi10G004600	Watermelon (97103) v2	lsiwmbB044
Lsi10G004600	Bottle gourd (USVL1VR-Ls)	lsilsiB021
Lsi10G004600	Cucumber (Gy14) v1	cgylsiB617
Lsi10G004600	Cucurbita maxima (Rimu)	cmalsiB089
Lsi10G004600	Cucurbita maxima (Rimu)	cmalsiB466
Lsi10G004600	Cucurbita moschata (Rifu)	cmolsiB073
Lsi10G004600	Cucurbita moschata (Rifu)	cmolsiB451
Lsi10G004600	Cucurbita moschata (Rifu)	cmolsiB491
Lsi10G004600	Cucurbita pepo (Zucchini)	cpelsiB046
Lsi10G004600	Cucurbita pepo (Zucchini)	cpelsiB388
Lsi10G004600	Wild cucumber (PI 183967)	cpilsiB497
Lsi10G004600	Cucumber (Chinese Long) v2	culsiB489
Lsi10G004600	Melon (DHL92) v3.5.1	lsimeB064
Lsi10G004600	Watermelon (Charleston Gray)	lsiwcgB045
Lsi10G004600	Watermelon (Charleston Gray)	lsiwcgB057
Lsi10G004600	Watermelon (97103) v1	lsiwmB065
Lsi10G004600	Watermelon (97103) v1	lsiwmB079
Lsi10G004600	Cucumber (Gy14) v2	cgyblsiB456