Lsi10G004510 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi10G004510
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	SAUR-like auxin-responsive protein family
Location	chr10 : 6623257 .. 6623550 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGATTCGGTTTCTATCTTTGGTTCCTCATGCCAAGCAAATTCTGAAGATGCAGTCAGGTTTCACCAAAAACCAGTTGGATGTTCCAAAAGGCCATGTGGCAGTTTATGTAGGAGAAATCCAAATGAAGCGGTTCGTGGTTCCAATATCTTACCTAAACCATCCGTCGTTTCAACAACTGCTCAGCCACGCAGAGGAAGAGTTTGGCTTCCATCATCCTAAAGGAGGCCTAACAATTCCTTGCAAAGAAGATGCCTTCATTGATCTCACTTCTAGATTGCAAGTAGCTTGA

mRNA sequence

ATGGGGATTCGGTTTCTATCTTTGGTTCCTCATGCCAAGCAAATTCTGAAGATGCAGTCAGGTTTCACCAAAAACCAGTTGGATGTTCCAAAAGGCCATGTGGCAGTTTATGTAGGAGAAATCCAAATGAAGCGGTTCGTGGTTCCAATATCTTACCTAAACCATCCGTCGTTTCAACAACTGCTCAGCCACGCAGAGGAAGAGTTTGGCTTCCATCATCCTAAAGGAGGCCTAACAATTCCTTGCAAAGAAGATGCCTTCATTGATCTCACTTCTAGATTGCAAGTAGCTTGA

Coding sequence (CDS)

ATGGGGATTCGGTTTCTATCTTTGGTTCCTCATGCCAAGCAAATTCTGAAGATGCAGTCAGGTTTCACCAAAAACCAGTTGGATGTTCCAAAAGGCCATGTGGCAGTTTATGTAGGAGAAATCCAAATGAAGCGGTTCGTGGTTCCAATATCTTACCTAAACCATCCGTCGTTTCAACAACTGCTCAGCCACGCAGAGGAAGAGTTTGGCTTCCATCATCCTAAAGGAGGCCTAACAATTCCTTGCAAAGAAGATGCCTTCATTGATCTCACTTCTAGATTGCAAGTAGCTTGA

Protein sequence

MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRLQVA

Homology

[Close]

BLAST of Lsi10G004510 vs. Swiss-Prot
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.3e-23
Identity = 54/84 (64.29%), Postives = 63/84 (75.00%), Query Frame = 1


Query: 12 AKQILKMQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQLLSHAEEEFGF 71
          AK+IL   +G        PKG +AVYVGE Q KR++VP+SYLN PSFQ LLS +EEEFGF
Sbjct: 10 AKKILSRSTGAGSA---APKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGF 69

Query: 72 HHPKGGLTIPCKEDAFIDLTSRLQ 96
           HP GGLTIPC ED FI++TSRLQ
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of Lsi10G004510 vs. Swiss-Prot
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 6.6e-23
Identity = 52/79 (65.82%), Postives = 59/79 (74.68%), Query Frame = 1


Query: 17 KMQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPKG 76
          K+ S  T      PKG +AVYVGE Q KR++VPISYLN PSFQ LLS +EEEFGF HP G
Sbjct: 12 KILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMG 71

Query: 77 GLTIPCKEDAFIDLTSRLQ 96
          GLTIPC ED FI++TSR Q
Sbjct: 72 GLTIPCPEDTFINVTSRFQ 90

[Close]

BLAST of Lsi10G004510 vs. Swiss-Prot
Match: SAU22_ARATH (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.5e-22
Identity = 48/66 (72.73%), Postives = 56/66 (84.85%), Query Frame = 1


Query: 30 PKGHVAVYVGEIQMKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPKGGLTIPCKEDAFID 89
          PKG +AVYVGE Q KR++VP+SYLN PSFQ LLS +E+EFGF HP GGLTIPC ED FI+
Sbjct: 25 PKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFDHPMGGLTIPCHEDTFIN 84

Query: 90 LTSRLQ 96
          +TSRLQ
Sbjct: 85 VTSRLQ 90

[Close]

BLAST of Lsi10G004510 vs. Swiss-Prot
Match: AX6B_SOYBN (Auxin-induced protein 6B OS=Glycine max PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 1.9e-22
Identity = 51/81 (62.96%), Postives = 63/81 (77.78%), Query Frame = 1


Query: 19 QSGFTKNQ-----LDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQLLSHAEEEFGFHH 78
          ++ F+ NQ     +DV KG++AVYVGE +M+RFV+P+SYLN PSFQ LLS AEEEFG+HH
Sbjct: 10 KASFSANQASSKAVDVEKGYLAVYVGE-KMRRFVIPVSYLNKPSFQDLLSQAEEEFGYHH 69

Query: 79 PKGGLTIPCKEDAFIDLTSRL 95
          P GGLTIPC ED F  +TS L
Sbjct: 70 PNGGLTIPCSEDVFQHITSFL 89

[Close]

BLAST of Lsi10G004510 vs. Swiss-Prot
Match: SAU21_ARATH (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 2.5e-22
Identity = 48/66 (72.73%), Postives = 56/66 (84.85%), Query Frame = 1


Query: 30 PKGHVAVYVGEIQMKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPKGGLTIPCKEDAFID 89
          PKG +AVYVGE Q KR++VP+SYL+ PSFQ LLS +EEEFGF HP GGLTIPC ED FI+
Sbjct: 23 PKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 82

Query: 90 LTSRLQ 96
          +TSRLQ
Sbjct: 83 VTSRLQ 88

[Close]

BLAST of Lsi10G004510 vs. TrEMBL
Match: A0A0A0LPI0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258720 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 4.3e-45
Identity = 90/97 (92.78%), Postives = 92/97 (94.85%), Query Frame = 1


Query: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQ 60
          MG R LSLVPHAKQILKMQSGFTKNQL+VPKGHVAVYVGEIQ KRFVVPISYLN PSFQQ
Sbjct: 1  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQ 60

Query: 61 LLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRLQVA 98
          LLSHAEEEFGFHHP GGLTIPCKEDAF+DLTSRLQVA
Sbjct: 61 LLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 97

[Close]

BLAST of Lsi10G004510 vs. TrEMBL
Match: A0A0A0LLF1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258700 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 6.8e-43
Identity = 84/97 (86.60%), Postives = 91/97 (93.81%), Query Frame = 1


Query: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQ 60
          MGIR LSLVPHAKQILK+QSG TKNQLDVPKGHVAVYVGEIQ KRFVVPISYLNHPSF+Q
Sbjct: 1  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ 60

Query: 61 LLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRLQVA 98
          LL HAEEEFGFHHP+GGLTIPCKEDAF ++TS+LQ +
Sbjct: 61 LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS 97

[Close]

BLAST of Lsi10G004510 vs. TrEMBL
Match: A0A0A0LJA3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258790 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 1.5e-42
Identity = 86/97 (88.66%), Postives = 91/97 (93.81%), Query Frame = 1


Query: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQ 60
          MGIRFLSLVPH KQILKMQSG TK QL VPKGHVAVYVGEIQMKRFVVPISYLN  SFQQ
Sbjct: 1  MGIRFLSLVPHVKQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQ 60

Query: 61 LLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRLQVA 98
          LLS+AEEEFGFHHP+GGLTIPCKEDAF+DLTS+LQV+
Sbjct: 61 LLSYAEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQVS 97

[Close]

BLAST of Lsi10G004510 vs. TrEMBL
Match: A0A0A0LIZ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258760 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 1.5e-42
Identity = 83/97 (85.57%), Postives = 91/97 (93.81%), Query Frame = 1


Query: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQ 60
          MGIR LSLVP+ KQILK+QSGF K QLDVPKGHVA+YVGEIQ KRFVVPISYLNHPSFQQ
Sbjct: 1  MGIRLLSLVPYGKQILKIQSGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRLQVA 98
          LL+H+EEEFGFHHP+G LTIPCKEDAFIDLTSRLQ++
Sbjct: 61 LLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS 97

[Close]

BLAST of Lsi10G004510 vs. TrEMBL
Match: A0A0A0LJ99_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258740 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 5.8e-42
Identity = 84/97 (86.60%), Postives = 89/97 (91.75%), Query Frame = 1


Query: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQ 60
          MG+  L LVPHAK+ILKMQS FTKNQLDVPKGHVAVYVGEIQ KRFVVP+SYLN PSFQQ
Sbjct: 1  MGVPLLCLVPHAKKILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPVSYLNDPSFQQ 60

Query: 61 LLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRLQVA 98
          LLS AEEEFGFHHP GGLTIPCKEDAF+DLTSRL+VA
Sbjct: 61 LLSRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLKVA 97

[Close]

BLAST of Lsi10G004510 vs. TAIR10
Match: AT4G38840.1 (AT4G38840.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 119.8 bits (299), Expect = 9.4e-28
Identity = 59/97 (60.82%), Postives = 71/97 (73.20%), Query Frame = 1


Query: 1  MGIRFLSLVPHAKQILK----MQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHP 60
          M IR   ++  +KQIL+    + S  + + LDVPKG++AVYVGE  MKRFVVP+SYL+ P
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 61 SFQQLLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSR 94
          SFQ LL  AEEEFGF HP GGLTIPC E+ FIDL SR
Sbjct: 61 SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASR 97

[Close]

BLAST of Lsi10G004510 vs. TAIR10
Match: AT4G34810.1 (AT4G34810.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 117.1 bits (292), Expect = 6.1e-27
Identity = 61/105 (58.10%), Postives = 76/105 (72.38%), Query Frame = 1


Query: 1   MGIRFLSLVPHAKQILKMQSGFTKNQLD------VPKGHVAVYVGE---IQMKRFVVPIS 60
           MG+   ++    KQILK+ S   +N+        VPKGHVAVYVGE   ++ KRFVVPIS
Sbjct: 1   MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPIS 60

Query: 61  YLNHPSFQQLLSHAEEEFGFHHPKGGLTIPCKEDAFIDL-TSRLQ 96
           +LNHPSF++ LS AEEEFGF+HP GGLTIPC+E+ F+DL  SRLQ
Sbjct: 61  FLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIASRLQ 105

[Close]

BLAST of Lsi10G004510 vs. TAIR10
Match: AT2G21210.1 (AT2G21210.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 116.3 bits (290), Expect = 1.0e-26
Identity = 57/98 (58.16%), Postives = 72/98 (73.47%), Query Frame = 1


Query: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEI-QMKRFVVPISYLNHPSFQ 60
          M IR   ++  +KQ+LK  S  + N + +PKGH+AVYVGE+ Q +RFVVP++YL+HP FQ
Sbjct: 1  MAIRISRVLQSSKQLLKSLS-HSSNNVAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQ 60

Query: 61 QLLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRLQVA 98
          +LL  AEEEFGF HP GGLTIPC E  FIDL SRL  +
Sbjct: 61 KLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRLSTS 97

[Close]

BLAST of Lsi10G004510 vs. TAIR10
Match: AT5G18080.1 (AT5G18080.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 110.2 bits (274), Expect = 7.5e-25
Identity = 54/84 (64.29%), Postives = 63/84 (75.00%), Query Frame = 1


Query: 12 AKQILKMQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQLLSHAEEEFGF 71
          AK+IL   +G        PKG +AVYVGE Q KR++VP+SYLN PSFQ LLS +EEEFGF
Sbjct: 10 AKKILSRSTGAGSA---APKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGF 69

Query: 72 HHPKGGLTIPCKEDAFIDLTSRLQ 96
           HP GGLTIPC ED FI++TSRLQ
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of Lsi10G004510 vs. TAIR10
Match: AT4G34790.1 (AT4G34790.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 110.2 bits (274), Expect = 7.5e-25
Identity = 57/102 (55.88%), Postives = 71/102 (69.61%), Query Frame = 1


Query: 7   SLVPHAKQILKMQSGFTKNQLD-----------VPKGHVAVYVGE-IQMKRFVVPISYLN 66
           S++P+AKQI K QS   KN              VPKGHVAVYVGE ++ KRFVVPISYLN
Sbjct: 6   SMLPNAKQIFKSQSMRNKNGSSSPSTTTTTSGLVPKGHVAVYVGEQMEKKRFVVPISYLN 65

Query: 67  HPSFQQLLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRLQV 97
           HP F++ L+ AEEE GFHH  GGLTIPC+E++F+ L +  Q+
Sbjct: 66  HPLFREFLNRAEEECGFHHSMGGLTIPCREESFLYLITSHQL 107

[Close]

BLAST of Lsi10G004510 vs. NCBI nr
Match: gi|659115596|ref|XP_008457635.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 189.9 bits (481), Expect = 2.1e-45
Identity = 89/97 (91.75%), Postives = 94/97 (96.91%), Query Frame = 1


Query: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQ 60
          MGIR LSLVPHAKQ+LKMQSGFTKNQLDVPKGHVAVYVGEIQ KRFVVPISYLNHPSFQQ
Sbjct: 1  MGIRLLSLVPHAKQLLKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRLQVA 98
          LLS+AEEEFGFHHP+GGLTIPCKED F+DLTSRLQV+
Sbjct: 61 LLSYAEEEFGFHHPQGGLTIPCKEDTFLDLTSRLQVS 97

[Close]

BLAST of Lsi10G004510 vs. NCBI nr
Match: gi|700206757|gb|KGN61876.1| (hypothetical protein Csa_2G258720 [Cucumis sativus])

HSP 1 Score: 188.3 bits (477), Expect = 6.1e-45
Identity = 90/97 (92.78%), Postives = 92/97 (94.85%), Query Frame = 1


Query: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQ 60
          MG R LSLVPHAKQILKMQSGFTKNQL+VPKGHVAVYVGEIQ KRFVVPISYLN PSFQQ
Sbjct: 1  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQ 60

Query: 61 LLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRLQVA 98
          LLSHAEEEFGFHHP GGLTIPCKEDAF+DLTSRLQVA
Sbjct: 61 LLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 97

[Close]

BLAST of Lsi10G004510 vs. NCBI nr
Match: gi|659115592|ref|XP_008457632.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 184.1 bits (466), Expect = 1.2e-43
Identity = 88/97 (90.72%), Postives = 92/97 (94.85%), Query Frame = 1


Query: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQ 60
          MGIR LSLVPHAKQILKMQSGFTKN+L+VPKGHVAVYVGEIQ KRFVVPISYLN PSFQQ
Sbjct: 1  MGIRLLSLVPHAKQILKMQSGFTKNRLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQ 60

Query: 61 LLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRLQVA 98
          LL+ AEEEFGFHHP GGLTIPCKEDAF+DLTSRLQVA
Sbjct: 61 LLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 97

[Close]

BLAST of Lsi10G004510 vs. NCBI nr
Match: gi|778674175|ref|XP_011650154.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 181.0 bits (458), Expect = 9.8e-43
Identity = 84/97 (86.60%), Postives = 91/97 (93.81%), Query Frame = 1


Query: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQ 60
          MGIR LSLVPHAKQILK+QSG TKNQLDVPKGHVAVYVGEIQ KRFVVPISYLNHPSF+Q
Sbjct: 1  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ 60

Query: 61 LLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRLQVA 98
          LL HAEEEFGFHHP+GGLTIPCKEDAF ++TS+LQ +
Sbjct: 61 LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS 97

[Close]

BLAST of Lsi10G004510 vs. NCBI nr
Match: gi|700206761|gb|KGN61880.1| (hypothetical protein Csa_2G258760 [Cucumis sativus])

HSP 1 Score: 179.9 bits (455), Expect = 2.2e-42
Identity = 83/97 (85.57%), Postives = 91/97 (93.81%), Query Frame = 1


Query: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQ 60
          MGIR LSLVP+ KQILK+QSGF K QLDVPKGHVA+YVGEIQ KRFVVPISYLNHPSFQQ
Sbjct: 1  MGIRLLSLVPYGKQILKIQSGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRLQVA 98
          LL+H+EEEFGFHHP+G LTIPCKEDAFIDLTSRLQ++
Sbjct: 61 LLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS 97

The following BLAST results are available for this feature:

BLAST of Lsi10G004510 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SAU24_ARATH	1.3e-23	64.29	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1	[more]
SAU20_ARATH	6.6e-23	65.82	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1	[more]
SAU22_ARATH	1.5e-22	72.73	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1	[more]
AX6B_SOYBN	1.9e-22	62.96	Auxin-induced protein 6B OS=Glycine max PE=2 SV=1	[more]
SAU21_ARATH	2.5e-22	72.73	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1	[more]

BLAST of Lsi10G004510 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPI0_CUCSA	4.3e-45	92.78	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258720 PE=4 SV=1	[more]
A0A0A0LLF1_CUCSA	6.8e-43	86.60	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258700 PE=4 SV=1	[more]
A0A0A0LJA3_CUCSA	1.5e-42	88.66	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258790 PE=4 SV=1	[more]
A0A0A0LIZ9_CUCSA	1.5e-42	85.57	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258760 PE=4 SV=1	[more]
A0A0A0LJ99_CUCSA	5.8e-42	86.60	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258740 PE=4 SV=1	[more]

BLAST of Lsi10G004510 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G38840.1	9.4e-28	60.82	SAUR-like auxin-responsive protein family	[more]
AT4G34810.1	6.1e-27	58.10	SAUR-like auxin-responsive protein family	[more]
AT2G21210.1	1.0e-26	58.16	SAUR-like auxin-responsive protein family	[more]
AT5G18080.1	7.5e-25	64.29	SAUR-like auxin-responsive protein family	[more]
AT4G34790.1	7.5e-25	55.88	SAUR-like auxin-responsive protein family	[more]

BLAST of Lsi10G004510 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659115596\|ref\|XP_008457635.1\|	2.1e-45	91.75	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]
gi\|700206757\|gb\|KGN61876.1\|	6.1e-45	92.78	hypothetical protein Csa_2G258720 [Cucumis sativus]	[more]
gi\|659115592\|ref\|XP_008457632.1\|	1.2e-43	90.72	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]
gi\|778674175\|ref\|XP_011650154.1\|	9.8e-43	86.60	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|700206761\|gb\|KGN61880.1\|	2.2e-42	85.57	hypothetical protein Csa_2G258760 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi10G004510.1	Lsi10G004510.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 13..93 score: 1.0
None	No IPR available	PANTHER	PTHR31929	FAMILY NOT NAMED	coord: 2..97 score: 1.9
None	No IPR available	PANTHER	PTHR31929:SF13	SUBFAMILY NOT NAMED	coord: 2..97 score: 1.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi10G004510	Cucsa.169490	Cucumber (Gy14) v1	cgylsiB282
Lsi10G004510	Cucsa.381960	Cucumber (Gy14) v1	cgylsiB617
Lsi10G004510	CmaCh20G007780	Cucurbita maxima (Rimu)	cmalsiB507

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi10G004510	Cucumber (Chinese Long) v3	cuclsiB104
Lsi10G004510	Watermelon (97103) v2	lsiwmbB043
Lsi10G004510	Wax gourd	lsiwgoB080
Lsi10G004510	Bottle gourd (USVL1VR-Ls)	lsilsiB021
Lsi10G004510	Cucumber (Gy14) v1	cgylsiB281
Lsi10G004510	Cucurbita maxima (Rimu)	cmalsiB089
Lsi10G004510	Cucurbita maxima (Rimu)	cmalsiB466
Lsi10G004510	Cucurbita maxima (Rimu)	cmalsiB548
Lsi10G004510	Cucurbita moschata (Rifu)	cmolsiB073
Lsi10G004510	Cucurbita moschata (Rifu)	cmolsiB451
Lsi10G004510	Cucurbita moschata (Rifu)	cmolsiB491
Lsi10G004510	Cucurbita moschata (Rifu)	cmolsiB533
Lsi10G004510	Cucurbita pepo (Zucchini)	cpelsiB220
Lsi10G004510	Cucurbita pepo (Zucchini)	cpelsiB388
Lsi10G004510	Cucurbita pepo (Zucchini)	cpelsiB436
Lsi10G004510	Cucurbita pepo (Zucchini)	cpelsiB589
Lsi10G004510	Wild cucumber (PI 183967)	cpilsiB091
Lsi10G004510	Wild cucumber (PI 183967)	cpilsiB497
Lsi10G004510	Cucumber (Chinese Long) v2	culsiB093
Lsi10G004510	Cucumber (Chinese Long) v2	culsiB489
Lsi10G004510	Melon (DHL92) v3.5.1	lsimeB054
Lsi10G004510	Melon (DHL92) v3.5.1	lsimeB064
Lsi10G004510	Watermelon (Charleston Gray)	lsiwcgB039
Lsi10G004510	Watermelon (Charleston Gray)	lsiwcgB057
Lsi10G004510	Watermelon (97103) v1	lsiwmB079
Lsi10G004510	Watermelon (97103) v1	lsiwmB084
Lsi10G004510	Cucumber (Gy14) v2	cgyblsiB086
Lsi10G004510	Cucumber (Gy14) v2	cgyblsiB456
Lsi10G004510	Melon (DHL92) v3.6.1	lsimedB056
Lsi10G004510	Silver-seed gourd	carlsiB289