Lsi10G004310 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi10G004310
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr10 : 6539249 .. 6541983 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAATGTTAGAAAAAGAAGAGATTATTTCCTTGCAAATTCTTCTCTGTACTTTTTTTTTTTTTCCCATTTTTTGGATTATTATGCTCTTTCTGCCACAGTTAGATTCATTGGTTAGTATTTACCTAAGACCATCAAATTCGAGCTGCAGAGTACACGTACTAATAAAAACTATCATTATTTCATTCATTGTGAGAAAAGAATGCTCCGAGTTTTCTGATTTCTGTCAACTTTTCCTATTTTCATGTTATATTTGACGATGTAGTTTAGTGAATGGTTTTATTTCCAATTCTCAGTCTACATTCATTCATCATTTTTCTAAATCTCTGAATTTGTAACAGACAAATTTTGTGCAATCAAGGACCACTAAATACTAGTTCCATTTTCTACATGGACTTCATTAGTTCCAGAGAATTGTTGATTGCATGACAAGTTTGATAATTTAACTATGACACTATTCCTTCCACACACTTGCTGTTAAAGTGTTGATAAAATTAAATTTACCGTACCTCATTAACTTAAACTTTTGGGTCAATTGGTGATTTAACATGGTATCAGAGTAGGAGGTCTTGAGATCGAGTCCTTGTAATTGCATTTACTCTCCAATTAATATTGATTTCTATTTGTTGTGTCTTCTACAAATTTTCAAGTCTACAATTGAGGGTTAGTGTTAAAGTTTTGATTCATAATCCATTGGCTTAAGCTTTTGAGTTAATCGGTGATTTAACACTTGACTCTAAGATGACAGTCAAATATTCAAACAAAACCATACCAGATCAAATCTAGAGTCAAGATCTAGAATAGTTTGTCTAAATGAATTTTGATCTAATTCTCATTTCATGAAAATATCTTGTATTAGCCAATTAAATTTGGTATTATAGTCAAGTCTGGTATTGGAGGGTAGCATGGTGGAACAAGATCCTGTGGCTGCTATCACTTTGGTTTTCTCTTCCATTTAATCACCCTTTGTACTTAGAGCCACATTCATTATCATCGGAACCTTCCTTTGTCATTCAAGAAAACATGACATTGCTGACAAGAACTTTAATTTCGGAGCTTTCAAGGATATAATAGCTAATAAAGATCTTGTTGTAGGAGATGCGGTAAAGGTAGGTGGAGGATATAGAGACACTGAAAAGAGATCTGATAAAGAGCTTTGCCTTCATCTGTTTATTTTTGTTCCACCTAGTGAAATGATTTATGCAGCACAAAACTTCATCGAAACGTGACGTTTCCATTTGTTACACTTTAGCTTGGAAGCAACGCAAGTTTATTTCATGCATCTTCTGCTCGAGTCTGACAAAATATTTCTCTTCACGAATTACTACATTTGAAAAGGGTAATATTCTCTCTGTAATAATACATTTATGATGTCTAGCCCTTTGTTGATATATATCTTCTGGCATAAGTAAGCTAAAATGTGATCTTCATTTCCATGCTAAGCATAACCAGTCTTTTTGTGGAATCATATTCATATGGGTCTAGAGGGCACTTGCAACATGATGTACTAAGAGTTGAGTTTATTTCATGCATCTTCTGCTCGAGTCTGACAAAATATTTCTCTTCACGAATTACTACATTTGAAAAGGGTAATATTCTCTCTGTAATAATACATTTATGATGTCTAGCCCTTTGTTGATATATATCTTCTGGCATAAGTAAGCTAAAGTGTGATCTTCATTTCCATGCTAAGCATAACCAGTCTTTTTGTGGAATCATATTCATATGGGTCTAGAGGGCACTTGCAACATGATGTACTAACAGTTGAGTTTGCTATTAAATTAGTACCAATTTTAGAACATATTTTTAATATCAAATTGTTTCTTGTATGAGTGTCTGAGTTAGGTTATGTACATCTCGATTAGTCTCACGGGGACAACCCGTCTGATCTTACAATATTTGGGTGTTAAAAAAATCCGTAAGATATTAAATTTTAAGTAAGTGGCTACCATGGATTAAACTTATTCCTTCTAAGTCCGCTCTTGGTAAGTATTCTACAATTCCGCGTGGCTCTTTAGACAAGTATGCATCACATCATGTCCCATCTAATTAATGCATTTAACAACATTTCATTTTTTTAATCAACGTATGGAGTTGCATTTCCTTGTATTAAATATCTTCCTCTGATCATAGTTCAGAATCATTCTGAAAATTCTCTAATTGGACAGAGCCATGGTTATTTGCTAAACACATCCTCTAAATCAGGAAATCATGTGGATTTTACAGCTACAGAAGTCCCTAAAGCCCACTTCTCAGTCTATGCAGGGCAGAAAGAAGATTTTTCAAATTCCTATACTAACCACCTCCACTGTGAGTTCCTGTGGTCCTAACTTTATGCATTTATTGTATTTCTGCTTCTTTTGCTACTTTATTTTAGGTAGAAAAATTCAAAAAACAGACACTGCTTGAGAGCTTTATACATGTTTCAATCAACAGTAAAAAGAGTCAAAATCATCTAGCATTCATTTACGTTGTAATTTTCTAATCAAGCCACATGAGAGAGAATCTGCTTTCTGTTAGTTTTGTTATGTAAATGTTAGCCCATACCAATGTCTCTTTTGCTTTCTTGCAATTTGCACCCACTCCCAGTTGCTTCTTTGGACAACATTCACATATTTGGTCTCTCCCCACTCTCCCTATAACCCAAGAGCCACCTAACTGTGCCCCTAAATTTAAGGTTCTCACCCACCCAGCTGTCCCTTTCCAATCTTCTGCTGGTCCTCAAATTGGCTGA

mRNA sequence

ATGCCAATAGCCACATTCATTATCATCGGAACCTTCCTTTGTCATTCAAGAAAACATGACATTGCTGACAAGAACTTTAATTTCGGAGCTTTCAAGGATATAATAGCTAATAAAGATCTTGTTGTAGGAGATGCGGTAAAGCTACAGAAGTCCCTAAAGCCCACTTCTCAGTCTATGCAGGGCAGAAAGAAGATTTTTCAAATTCCTATACTAACCACCTCCACTGTAGAAAAATTCAAAAAACAGACACTGCTTGAGAGCTTTATACATGTTTCAATCAACACCCATACCAATGTCTCTTTTGCTTTCTTGCAATTTGCACCCACTCCCAGTTGCTTCTTTGGACAACATTCACATATTTGGTCTCTCCCCACTCTCCCTATAACCCAAGAGCCACCTAACTGTGCCCCTAAATTTAAGGTTCTCACCCACCCAGCTGTCCCTTTCCAATCTTCTGCTGGTCCTCAAATTGGCTGA

Coding sequence (CDS)

ATGCCAATAGCCACATTCATTATCATCGGAACCTTCCTTTGTCATTCAAGAAAACATGACATTGCTGACAAGAACTTTAATTTCGGAGCTTTCAAGGATATAATAGCTAATAAAGATCTTGTTGTAGGAGATGCGGTAAAGCTACAGAAGTCCCTAAAGCCCACTTCTCAGTCTATGCAGGGCAGAAAGAAGATTTTTCAAATTCCTATACTAACCACCTCCACTGTAGAAAAATTCAAAAAACAGACACTGCTTGAGAGCTTTATACATGTTTCAATCAACACCCATACCAATGTCTCTTTTGCTTTCTTGCAATTTGCACCCACTCCCAGTTGCTTCTTTGGACAACATTCACATATTTGGTCTCTCCCCACTCTCCCTATAACCCAAGAGCCACCTAACTGTGCCCCTAAATTTAAGGTTCTCACCCACCCAGCTGTCCCTTTCCAATCTTCTGCTGGTCCTCAAATTGGCTGA

Protein sequence

MPIATFIIIGTFLCHSRKHDIADKNFNFGAFKDIIANKDLVVGDAVKLQKSLKPTSQSMQGRKKIFQIPILTTSTVEKFKKQTLLESFIHVSINTHTNVSFAFLQFAPTPSCFFGQHSHIWSLPTLPITQEPPNCAPKFKVLTHPAVPFQSSAGPQIG
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi10G004310.1Lsi10G004310.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi10G004310Cla97C11G210500Watermelon (97103) v2lsiwmbB043
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi10G004310Cucumber (Chinese Long) v3cuclsiB104
Lsi10G004310Cucumber (Chinese Long) v3cuclsiB524
Lsi10G004310Watermelon (97103) v2lsiwmbB056
Lsi10G004310Wax gourdlsiwgoB066
Lsi10G004310Wax gourdlsiwgoB080
Lsi10G004310Bottle gourd (USVL1VR-Ls)lsilsiB021
Lsi10G004310Cucumber (Gy14) v1cgylsiB281
Lsi10G004310Cucumber (Gy14) v1cgylsiB617
Lsi10G004310Cucurbita maxima (Rimu)cmalsiB089
Lsi10G004310Cucurbita maxima (Rimu)cmalsiB466
Lsi10G004310Cucurbita maxima (Rimu)cmalsiB507
Lsi10G004310Cucurbita maxima (Rimu)cmalsiB548
Lsi10G004310Cucurbita moschata (Rifu)cmolsiB073
Lsi10G004310Cucurbita moschata (Rifu)cmolsiB451
Lsi10G004310Cucurbita moschata (Rifu)cmolsiB491
Lsi10G004310Cucurbita moschata (Rifu)cmolsiB533
Lsi10G004310Cucurbita pepo (Zucchini)cpelsiB195
Lsi10G004310Cucurbita pepo (Zucchini)cpelsiB220
Lsi10G004310Cucurbita pepo (Zucchini)cpelsiB436
Lsi10G004310Cucurbita pepo (Zucchini)cpelsiB589
Lsi10G004310Wild cucumber (PI 183967)cpilsiB091
Lsi10G004310Wild cucumber (PI 183967)cpilsiB497
Lsi10G004310Cucumber (Chinese Long) v2culsiB093
Lsi10G004310Cucumber (Chinese Long) v2culsiB489
Lsi10G004310Melon (DHL92) v3.5.1lsimeB054
Lsi10G004310Melon (DHL92) v3.5.1lsimeB064
Lsi10G004310Watermelon (Charleston Gray)lsiwcgB039
Lsi10G004310Watermelon (Charleston Gray)lsiwcgB057
Lsi10G004310Watermelon (97103) v1lsiwmB079
Lsi10G004310Watermelon (97103) v1lsiwmB084
Lsi10G004310Cucumber (Gy14) v2cgyblsiB086
Lsi10G004310Cucumber (Gy14) v2cgyblsiB456
Lsi10G004310Melon (DHL92) v3.6.1lsimedB056
Lsi10G004310Melon (DHL92) v3.6.1lsimedB068
Lsi10G004310Silver-seed gourdcarlsiB390
Lsi10G004310Silver-seed gourdcarlsiB753