Lsi10G004100 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi10G004100
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr10 : 6235037 .. 6237139 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTACCTTATAAAGCGGATACTCCCTCTTTCCTTCAGCACAAACATCCCCGTCCTTGTCAATGAGCGCAAATCTTGCGCCAGAAGTACCAAAATCCATCCCAAGGTAAAGCCGGCTCCCTGATTGAGGAGGCACCGCGTCCGTTTCAACACTCATTGTTGTCCGTCTTCGTTTTCTTGGACTTTGATTCCTCGAAATCCAAATCCCTGACGCGTGAAGATCATATGCATTGATGAATTTGAGCTCATCCACTTAGCTTCAAAATGCAATTGTAATTAACATGAAATCAACATAAAATTTCGGCGAGAACAGAACATTGCTCAGATATAGCTCGTAACTGAAATATAACATAGCAATACTACACAAAAAACCATACAGTAGAGAGGGAGAGAGAACCATGTTTAGAGGGCGAGTATGATGTTGATGGCCATGGGAACAAGAACAAATTTGCAGCAGGAGAAAGAAGATTGTAAGGAAGCATAATTCTGTGAAGTTTTTCAGTTTCTTTCAGAATTCAGCTGTGCTTCTAATCGGATAAGAGGGAATTGAGCCTCTCAATCCTCAGCTCTTGGATTTTTTTTAGTATAAAAAGATTTATTTATTTTATTATTATTATTATTGTTCGCGCGGGAACCTCGTCGCTCCTCTTCTAATCCACTTCTCTAGTTTGGGTACTTCGTTGGAGGTGACCTGTAAGAGTACATGGTGCCCATTCGATGAGTGTTTAATAGTACACTTAATATTTAGTTTGACTAAGCATAAAGAGAATTACTTACCCTTTGAAGTTGTTGGTATGGCTATTTATAAGGCTCATCCTCTAACTCTCACATGGGAATATGTGCAATATCAGCAATGTCATAATATGTGTGACCCTCGAGGTTGTAGAGTGTTATTGGCAAGTTTGGCTCAATCATTTCTCCTTTGATGAAACTCCACGAGTTCGACTGGTCAAATCGAAACTCGAGAGTTAGCCTTTTGAGAAGCACAGACCATATTTTGGCCACTTCGTGGGCTTCGGCCTTGCCTTGAGCAACCCTCAACAAATATTGGTATTATTAAGGTAAGTGCAATAGACAACACTTTTAGGACTAATAATTAAGTGTATAACAACATTTTTAAAGAATTACAAATATAGCAAAATTTGTACGTTATAGACTATCGCTAATAGACGCGTACCAACGATATAGTCTATCACTGATAGACTCGAGGATGGATCTAAATTTTGCTATATTGGTAAATTTTTTTGCGTTGTGTTATATCTACTAATAGTTTGAACCTAATTTATGTATTTGCAACTACCATTTATTATTGTTGTTATTTTGAGTTCAACCATAGAAAAAATTCGAAGATCTAACTTCTTGATCAACAATATATGTCTAAATTCATGACTAGTGGCTAAAATGAGCATAGTTCAACTAGCATAGTGTTTGAACTATCAACCCGAAGTCAAAGGTTCGAAATCAGTTAAACTATGCTTAAGTTAGCAACAAACATCATGATCAATAATTTATATCTAAATCAGTTAAAAAAATCGAACATGGAACCTCTTGCTAAAATATATATATTTAAATAATCTATACTATGCTTAAGCTAACAACTAACATCTTGATTAATAGTATATGTCTAAATCAATTGAAAAAAATCGTAGATTTAACCTTGGTCAATAATATATCTCTGAATCAGTTAAACTGTGCTTAGTCTTTTGATTGACAATAAAATATCTAATTAAGTTAAACTACGCCTAACTTAGTAATAGATGACTTTTGAAGTCAGGGGTTCAATTTTTTCCTCATACTTATTTAAAAAGAGAGAGAGAAAGAGAGAGAGTTAGAACCGACGAATCTTTTGGTCCACCATGAATTTACCTGGTTGCTTCGATCTTAATTATTTGAGTGATGTGTTAATTTTATTTTAGTCATAGTAAATTATGCAGGTTGGTTTGACGGTTTTGTTGAGATACTTTAGTGACTCTTTTTCAAAAGAAGAAAAGAAAATGGAAAAAAAAAAGTACTTTATTCAATAATTTCACTGGCAATAATTTCATTGTTTTTCATATTACAATAATCTCATTGGTTATTGTTTCTGTTAGGTGTAGCAATTTAA

mRNA sequence

ATGTACCTTATAAAGCGGATACTCCCTCTTTCCTTCAGCACAAACATCCCCGTCCTTGTCAATGAGCGCAAATCTTGCGCCAGAAGTACCAAAATCCATCCCAAGATCATATGCATTGATGAATTTGAGCTCATCCACTTAGCTTCAAAATGCAATTTAGAGAGGGAGAGAGAACCATGTTTAGAGGGCGAGTATGATGTTGATGGCCATGGGAACAAGAACAAATTTGCAGCAGGAGAAAGAAGATTTTTGGGTACTTCGTTGGAGGTGACCTTCATAGTAAATTATGCAGGTGTAGCAATTTAA

Coding sequence (CDS)

ATGTACCTTATAAAGCGGATACTCCCTCTTTCCTTCAGCACAAACATCCCCGTCCTTGTCAATGAGCGCAAATCTTGCGCCAGAAGTACCAAAATCCATCCCAAGATCATATGCATTGATGAATTTGAGCTCATCCACTTAGCTTCAAAATGCAATTTAGAGAGGGAGAGAGAACCATGTTTAGAGGGCGAGTATGATGTTGATGGCCATGGGAACAAGAACAAATTTGCAGCAGGAGAAAGAAGATTTTTGGGTACTTCGTTGGAGGTGACCTTCATAGTAAATTATGCAGGTGTAGCAATTTAA

Protein sequence

MYLIKRILPLSFSTNIPVLVNERKSCARSTKIHPKIICIDEFELIHLASKCNLEREREPCLEGEYDVDGHGNKNKFAAGERRFLGTSLEVTFIVNYAGVAI
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi10G004100.1Lsi10G004100.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi10G004100Wax gourdlsiwgoB066
Lsi10G004100Wax gourdlsiwgoB080
Lsi10G004100Wax gourdlsiwgoB092
Lsi10G004100Bottle gourd (USVL1VR-Ls)lsilsiB021
Lsi10G004100Bottle gourd (USVL1VR-Ls)lsilsiB032
Lsi10G004100Bottle gourd (USVL1VR-Ls)lsilsiB044
Lsi10G004100Cucumber (Gy14) v1cgylsiB145
Lsi10G004100Cucumber (Gy14) v1cgylsiB609
Lsi10G004100Cucurbita maxima (Rimu)cmalsiB466
Lsi10G004100Cucurbita maxima (Rimu)cmalsiB507
Lsi10G004100Cucurbita maxima (Rimu)cmalsiB548
Lsi10G004100Cucurbita moschata (Rifu)cmolsiB451
Lsi10G004100Cucurbita moschata (Rifu)cmolsiB491
Lsi10G004100Cucurbita moschata (Rifu)cmolsiB533
Lsi10G004100Cucurbita pepo (Zucchini)cpelsiB195
Lsi10G004100Cucurbita pepo (Zucchini)cpelsiB220
Lsi10G004100Cucurbita pepo (Zucchini)cpelsiB436
Lsi10G004100Cucurbita pepo (Zucchini)cpelsiB589
Lsi10G004100Wild cucumber (PI 183967)cpilsiB091
Lsi10G004100Wild cucumber (PI 183967)cpilsiB412
Lsi10G004100Wild cucumber (PI 183967)cpilsiB497
Lsi10G004100Cucumber (Chinese Long) v2culsiB093
Lsi10G004100Cucumber (Chinese Long) v2culsiB489
Lsi10G004100Melon (DHL92) v3.5.1lsimeB045
Lsi10G004100Melon (DHL92) v3.5.1lsimeB064
Lsi10G004100Watermelon (Charleston Gray)lsiwcgB039
Lsi10G004100Watermelon (Charleston Gray)lsiwcgB042
Lsi10G004100Watermelon (Charleston Gray)lsiwcgB057
Lsi10G004100Watermelon (97103) v1lsiwmB059
Lsi10G004100Watermelon (97103) v1lsiwmB079
Lsi10G004100Watermelon (97103) v1lsiwmB084
Lsi10G004100Cucumber (Gy14) v2cgyblsiB086
Lsi10G004100Cucumber (Gy14) v2cgyblsiB456
Lsi10G004100Melon (DHL92) v3.6.1lsimedB047
Lsi10G004100Melon (DHL92) v3.6.1lsimedB068
Lsi10G004100Melon (DHL92) v3.6.1lsimedB079
Lsi10G004100Silver-seed gourdcarlsiB277
Lsi10G004100Silver-seed gourdcarlsiB288
Lsi10G004100Silver-seed gourdcarlsiB390
Lsi10G004100Cucumber (Chinese Long) v3cuclsiB104
Lsi10G004100Cucumber (Chinese Long) v3cuclsiB176
Lsi10G004100Cucumber (Chinese Long) v3cuclsiB435
Lsi10G004100Cucumber (Chinese Long) v3cuclsiB524
Lsi10G004100Watermelon (97103) v2lsiwmbB035
Lsi10G004100Watermelon (97103) v2lsiwmbB043
Lsi10G004100Watermelon (97103) v2lsiwmbB056