Lsi10G003880 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi10G003880
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr10 : 5888879 .. 5895972 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGTAAGATAGATAGGTTGATTATTCTCTAGTCTTATAAGATTGTGACACATGATAGTAGTTACATTTATACTATTATATATTCTCATGTCAACTCAACTTTTAAAATGTGTTCTAAGATCTTTTTTTTTCAATAGATATAATTGTCTCATATTTCTATTTTTGTGTTTGGATAAGTCTAATTATGCCTTAAGAGTCGAATACACTCAGGTTTGGTTTTTGGTTTTTGAAAATTAAACATATTTTCTCTCAATTTCTTACCATGGTTTTCATCTTTCTTAAGTAAAAAAGTTGATTTTTTTAGTCCAATTCTAAAAACAAAAATAAGCTTTATAAAAAGGAAAAAAATTTTAAAATAGAAAAATAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTTAAAAAAAAAAGAAAAAAAAAANAAATATTTACACAAAATAGCAAAATTTTTAGATAGTTGTGATAGACACTGATAGAAGTCTACCAGGATCTAACAGTAATAGAAATAATAGAAGTCTATCACTGATAGATACTAATAGAAGTCTATCAATGTCTATCAGTGTTTTTTTTTTACTATTTTTTGTAAATAGTTTGACATTTTTTCTATATGTGAAAATTTTCCTTATAAAAACTACTTTTTTTAGTTTTCATAACTTGGTTTGATTTTTGAAATTTAGAGGTGAATCAGTGTTTATAGATTTAATTCTAAAAAACCAATGCCCTGTTTAGTAATTATTTGATTTTTAGTTTTTGAAAATTAATCTTCTTGAGTTTTATCCTAACGATAGATAAAACTTCAAAACTATGTATTAAATACAAAGTTTTCTAATCTCAGTATAGCTCAGTTAGTTAAGACATATACTTGCGATCAAGAGGTTAGAAGTTCGGAAAACAAAAATCAAACTAGACGAACATAGAACCTACTCCAAATGGAACAAGTTTGGTGGAGGACAATTCATTAGACTATAGTACCAAATATGTAGAGAGATAGGGCACAATGCTTCCATGAGCTATCCATTTGGCTAATTAACTTGAACTACAAGCCACAAATATAGTTAAAATTCAAGCCTACTTTAATTGATACCAACCCAACACCTCCCAATGATTTAAAGAAGTTAGTGCAACACCATCATCCCCAAATGATCTTTCTTATGGCAACAAAGGTTCATCAGCAAAAAAATGAAAGCTTTACCAAATCATATTCAATTTTGCAATGGTTTTGTTGTCAACAGTGTCGGATTGAGTGGTGACTTGGTTTTTTTTTTTTTTTTTTTTTTTAAATAATGAGGTTGTCGTTGACCTTTTAGCTCTCTCCAAATCTCACATTAATGTCAAAGTTACTGATAATAATCACATTAATGTCAAAGAGCATAAATTGATGATTGATTTCCACCCCATTAGCTTGTGTAACGTATGTTATAAATTATTTCGAAATTTTTAGCTAACAGGCTTAAGCTCATTCTCGATCAAATTATTTATGTGAACATGTCTCGCGCTTGATTTTTGATAATGTTATTGTGACTTTTGAATGTCTCCATCATATGAAGATTTCTTCTATAGAAAATGGTATTTTCTTTAAAGCTTGATATGAGCAAGGCATATGATACGGTTGAGTGGCATTTCCTGTGCAGTATTATGAAGAAGATAGGGTTTAATGATAAGTTGCCAGATTCATGTTATTCATGTGTGTATGAGTTCTGTGTCTTTTCAGCTTCTTATTAATGGTGAACCTACAAAAACTTTCAAGTCATCTAGAGGTTTAAGATATGGTGACCCTTTATCTCCTTATCTTTTTCTTATTTGTGTTGAAGGTTTATCTAATCTTCTCCATTTATCATGTTGAATATCATAAATTGATAACTGACTTTTGTGTTGCTCGTTTTGCCCTTGCCATTTCTCACTTTTTTTTTTTTTTTTTTTTGTGTACAGATGATAGCCTTATTATTAAATTTCAGGAGATTGTTAGGATTCTTGATGTGTATGAAAAGGCATAAGGTTAGGTTATCAACTACAATAAATCTGCCACTCCTTTTGGTCCTAGTATACCTATCCCAACAAATGCTGCCATATCCAGTCATCTAATGTCAAAATGCTTCACAATTATGTAAAGTACCTGGGTGTTCCTTCATCTTTATCCAAGAATAAACAGGTATTTTTATTTTACATAAAAGGTAAAGTGTACAGAGCTTTATAAGTTTGGAAGGGACATATGGTTTTGAAAGCAAACAATGATGTACTAATTAAAGCGGTGGCTCAAGCCATTTCTAGCCTACACCCTTGTTTTAAATTGCCTTTGGGATCTTGTCGTGAGTTTAATCAAATTATGGCTTATTTTTTGTGGAATGACTCCAATAGAGGGGTGGAGGGGGGGAACCACTGGATTACCTAGAAGTGTATGACCTTCCTAAAGAAAAAATGTAGTTTGGGTTTTCATGATATCCACCTTTCGAATCAAGCTATGGGTAAACATACCTAGCACATTCTGGAAAGAGAGCATTATCTCAAGCCCGAATATTAAAGGTTAAGTATTTCCCAAATATATCTCCCTTCCTATACTTGTGTGGTCATCAGCTTGCTTTCAAAGGTGGTTGTTGGAATATTAGGGATGATTGATCGATCGATAACATTCTAATCAATGGATTTCTAGAGAAACTACCTTCAAGCTCCTTTCTTTCTCGCAGCCCCTAACTGTGTCATGGGTGGGTAGCCTTATCTGTGATGGGCAATGGAATTGGGCTCTAATTAATGAGTTATTCTATTCATAAGCTATTGAGCTCATCAAGAGTATTTCCCTTTTCTCTCCTTCTCACTTGAATGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCATTATGATTAACAAAAAAGGTTTCTATTCCGTCAAAAATGGATACAAATTAGCTCAGGCTTTGATCGTGGAAGCATCGTTCTCCTCAAGTTTCACATGGAAAATTTTTGGAAATCGATGTGGGCCCTTTTTAGCCTACAAAAGAAGAAATTCTTTTTGTGGTGTAATTGTCTCAACTCTCTTCCAACATGTTCTACTTTGACTAGTCATTTTATCATTACTTGTGGAGATTGCACTTTATGTTGTTGTGCTTCTGAATCTAATATCCACGCCCTATGGTATTGCAAGGGAACTAAACAAATTTGGTCTTTGTGGTTTCTTAGTCTTCACTTTTAATATGCACTATTCCGATGTTGCTTCTCTGTATTTATTATAATAGTTTAATGTTATGTTATTATCATCATTATATAAATATTATATTTAGAATTCAAATTTTATTGTTTAATGGTCAAAATATGTTTGAATTGAATATTTAAATTTAGATTAAATATATGAATAACCTGATTGGTAATTATTTTTGTTTAATAGAAAATTAAAATAATCTCTTTAAATTCAAATTGACCATGTGAAACTAATCATATAAAAAGATTTAGTGAGAAATTAAATTATTTAATTAAAACTTTTCCGTAGTAGCAATTTAAGTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAATTCCTCATATAAGGATATCTATAAATAGACTACTTACTAGAGTGTTACCATCTAAATCTCCATTTAAAATCTTATATATAGAATGCAAACTCGCTATCGACATTTGATGGTCTCTCTCTTTGTTGTTTTTCCTTCCTTTACAACTCAAGCATGAGTTTAACAATATGTGGGATACAAGATGCGGAATTCGAACCTCTTAGTTGATGACTCATGTTTTATGTCAGTTCAATTATGTTAATAAGATACCCTACGAAATATAACAATCATAAAATTATTTGGTTGTTACACATTGTTTGTTATTGACTCGTCTTAATGAGAATATGATATATGTATTATGTAGAGCATCTTTTTATACTTGGGAAATAAAAATAAGACTAAATAAATTTAAAGCATATATGAGACATATAACATGTATCATCATCCACTAAATATGTTTGAATCAAATGCTAATCAGATTTGGGAATCCTCAAAATAAAATTTATAATGAGAGAATATATTTGGTACACTTTTCATGAGATCACACAGGTTATTGTTCCTCAGTTTTAGTAGTGAAATCCATAGTTTTAGGAGACGAATTTGGAAGTTTTGTCCAAAACTAGGATTGTTTAG

mRNA sequence

ATGGTTGTCGGATTGAGTGGTGACTTGATGATAGCCTTATTATTAAATTTCAGGAGATTGTTAGGATTCTTGATGTGTATGAAAAGGCATAAGTATACCTATCCCAACAAATGCTGCCATATCCAGTCATCTAATGTCAAAATGCTTCACAATTATGTAAAGTACCTGGGTGTTCCTTCATCTTTATCCAAGAATAAACAGGAGACGAATTTGGAAGTTTTGTCCAAAACTAGGATTGTTTAG

Coding sequence (CDS)

ATGGTTGTCGGATTGAGTGGTGACTTGATGATAGCCTTATTATTAAATTTCAGGAGATTGTTAGGATTCTTGATGTGTATGAAAAGGCATAAGTATACCTATCCCAACAAATGCTGCCATATCCAGTCATCTAATGTCAAAATGCTTCACAATTATGTAAAGTACCTGGGTGTTCCTTCATCTTTATCCAAGAATAAACAGGAGACGAATTTGGAAGTTTTGTCCAAAACTAGGATTGTTTAG

Protein sequence

MVVGLSGDLMIALLLNFRRLLGFLMCMKRHKYTYPNKCCHIQSSNVKMLHNYVKYLGVPSSLSKNKQETNLEVLSKTRIV
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi10G003880.1Lsi10G003880.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi10G003880Watermelon (97103) v2lsiwmbB035
Lsi10G003880Watermelon (97103) v2lsiwmbB043
Lsi10G003880Watermelon (97103) v2lsiwmbB056
Lsi10G003880Wax gourdlsiwgoB062
Lsi10G003880Wax gourdlsiwgoB080
Lsi10G003880Bottle gourd (USVL1VR-Ls)lsilsiB021
Lsi10G003880Bottle gourd (USVL1VR-Ls)lsilsiB032
Lsi10G003880Bottle gourd (USVL1VR-Ls)lsilsiB044
Lsi10G003880Cucumber (Gy14) v1cgylsiB145
Lsi10G003880Cucumber (Gy14) v1cgylsiB609
Lsi10G003880Cucurbita maxima (Rimu)cmalsiB507
Lsi10G003880Cucurbita maxima (Rimu)cmalsiB548
Lsi10G003880Cucurbita moschata (Rifu)cmolsiB491
Lsi10G003880Cucurbita moschata (Rifu)cmolsiB533
Lsi10G003880Cucurbita pepo (Zucchini)cpelsiB195
Lsi10G003880Cucurbita pepo (Zucchini)cpelsiB220
Lsi10G003880Cucurbita pepo (Zucchini)cpelsiB436
Lsi10G003880Cucurbita pepo (Zucchini)cpelsiB589
Lsi10G003880Wild cucumber (PI 183967)cpilsiB091
Lsi10G003880Wild cucumber (PI 183967)cpilsiB412
Lsi10G003880Wild cucumber (PI 183967)cpilsiB497
Lsi10G003880Cucumber (Chinese Long) v2culsiB093
Lsi10G003880Cucumber (Chinese Long) v2culsiB489
Lsi10G003880Melon (DHL92) v3.5.1lsimeB045
Lsi10G003880Melon (DHL92) v3.5.1lsimeB064
Lsi10G003880Watermelon (Charleston Gray)lsiwcgB039
Lsi10G003880Watermelon (Charleston Gray)lsiwcgB042
Lsi10G003880Watermelon (Charleston Gray)lsiwcgB057
Lsi10G003880Watermelon (97103) v1lsiwmB059
Lsi10G003880Watermelon (97103) v1lsiwmB079
Lsi10G003880Watermelon (97103) v1lsiwmB084
Lsi10G003880Cucumber (Gy14) v2cgyblsiB086
Lsi10G003880Cucumber (Gy14) v2cgyblsiB456
Lsi10G003880Melon (DHL92) v3.6.1lsimedB047
Lsi10G003880Melon (DHL92) v3.6.1lsimedB068
Lsi10G003880Melon (DHL92) v3.6.1lsimedB079
Lsi10G003880Silver-seed gourdcarlsiB277
Lsi10G003880Silver-seed gourdcarlsiB288
Lsi10G003880Silver-seed gourdcarlsiB425
Lsi10G003880Cucumber (Chinese Long) v3cuclsiB104
Lsi10G003880Cucumber (Chinese Long) v3cuclsiB176
Lsi10G003880Cucumber (Chinese Long) v3cuclsiB435
Lsi10G003880Cucumber (Chinese Long) v3cuclsiB524