Lsi10G002740 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGAAACTTTGGTTGCAAGATATTGGAGGTGATAAGTGAAGGGTTAGGACTTGGGAGAGGATACTTTGAGAGTGAAATAAATGAAAATCCATTGTTTCAAGTAAACCATTACCCACCATGCCCAAACCCTAGCTTGACTTTGGGATTGTTCCAACATTGTGATCCAAGCCTCATCACCATTTTGTTTCAAGATATCAATGGCCTTCAAGTCTTGAAGGATGGTCAATGGATTGATGTTGATCCTATTGAGGATACCCTTTTGATAAACTTTGGCTATCTTCTCGAGGTACGTTCATTTTGATTCTTACTACTTTTAATTTCCTTAAACTTAAGGCATTCGCCATCACGTTAAAAAATTACTTTGAATTTGTTAAGAATAAATTTCAATGTATTTACTATTTAAGAATGGTTGGAGATGACTTTTGGAAATAATGTTGTTAAAATAAACGGTTTAGGTTTGTTTTAATTTTAATATGAGAGACACTAAACTATATTACATTTTTAGAAAAATAAAATCAAAGCAACAAAAATTAAAAATGGCTATATGAGAAGTGTTTTTGTGAGAAATTGAGAAGTGTTTGGGACATTAGGTTAATTATTATAGTTAGAAGTTATTATAATCTGTAGGTTGTAATAATTTATATTTGAGGTACAAACTATTCTAGTTTGAGTTATAATTGTTTGTATTTGGATGCAGACTATTTTAGTTTGAGTAAGAAATAGTAAACACTGTAATAAAAAAGAGAATAAATAAGAAATAGTAAACATTGTAATAAAGAAAGATTTGAAATAATAATACTGTAATTAATTGTATGTTATATATAATAATTAGAAACACCAACTATATTATAATTCTAGCCATAAACATGAAACGGGATGCTATAATATCCCACTCCACCCGCTTGAAAGTAAAAAGTATGGATTAGCTTTTTCCAACCCATATTTGGTTGACAGTATTGTAGACCAAAATTTTTTACTACAAACTAGATGCAATTGTAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATAAAAAAAACCTATTGGTGTTAGATTTTTTTTCTTTTTCTTTTGACAATATGTGGGGTGAGGAAATCGAATCTTTGACTTCGAAGTTGATAGTACAAACACTATACTAGTTGAACTATGCTCACTTTAACTGTTATTAGTTGTTTTCTTCTATATGGAAACGTAATGAAATATAGATGATTACCATAATTCCCTATTTCTATTTCTAATTAATTAAAACGTGGTAACTAAATAATATATTATAAGAATTGAAACACCGTTTATCATTTTTATTTATTTATTCAAATTTTTATATTTTAAAAGTTAAACACTTAAATTAAAATTATACTAAATAATAATAATAGTAGAAGTAAAAGAAATTAACTTACTCATGAAATTAACTATAGAAGTATTTCTCTTTCCAAAAAAAGAAAAGAAAAGAAAGAAATTAACTATACAAGTAGTTCTTGGTTTTATATAGGTGATTAGCAATGGAAAGCTAAAAGCAACGGAACATCGAGTCGTGACAAATACGCAGACATCTCGACAAAGTTTAGTCTATCTAACTTTTCCTGAAAATGAAGTGATTATAGAACCAGCAAAAAGCCTGATAAATGAAGCTAATCCTCCACATTATCGCTCCATCAAGTACAAAGAATTTATCGGAGATTATGCTTCTATGTCTAAAGATAGAGAGACAATAATCAAGTATTTAGCAACAACCTAA ATGAGAAACTTTGGTTGCAAGATATTGGAGGTGATAAGTGAAGGGTTAGGACTTGGGAGAGGATACTTTGAGAGTGAAATAAATGAAAATCCATTGTTTCAAGTAAACCATTACCCACCATGCCCAAACCCTAGCTTGACTTTGGGATTGTTCCAACATTGTGATCCAAGCCTCATCACCATTTTGTTTCAAGATATCAATGGCCTTCAAGTCTTGAAGGATGGTCAATGGATTGATGTTGATCCTATTGAGGATACCCTTTTGATAAACTTTGGCTATCTTCTCGAGGTGATTAGCAATGGAAAGCTAAAAGCAACGGAACATCGAGTCGTGACAAATACGCAGACATCTCGACAAAGTTTAGTCTATCTAACTTTTCCTGAAAATGAAGTGATTATAGAACCAGCAAAAAGCCTGATAAATGAAGCTAATCCTCCACATTATCGCTCCATCAAGTACAAAGAATTTATCGGAGATTATGCTTCTATGTCTAAAGATAGAGAGACAATAATCAAGTATTTAGCAACAACCTAA ATGAGAAACTTTGGTTGCAAGATATTGGAGGTGATAAGTGAAGGGTTAGGACTTGGGAGAGGATACTTTGAGAGTGAAATAAATGAAAATCCATTGTTTCAAGTAAACCATTACCCACCATGCCCAAACCCTAGCTTGACTTTGGGATTGTTCCAACATTGTGATCCAAGCCTCATCACCATTTTGTTTCAAGATATCAATGGCCTTCAAGTCTTGAAGGATGGTCAATGGATTGATGTTGATCCTATTGAGGATACCCTTTTGATAAACTTTGGCTATCTTCTCGAGGTGATTAGCAATGGAAAGCTAAAAGCAACGGAACATCGAGTCGTGACAAATACGCAGACATCTCGACAAAGTTTAGTCTATCTAACTTTTCCTGAAAATGAAGTGATTATAGAACCAGCAAAAAGCCTGATAAATGAAGCTAATCCTCCACATTATCGCTCCATCAAGTACAAAGAATTTATCGGAGATTATGCTTCTATGTCTAAAGATAGAGAGACAATAATCAAGTATTTAGCAACAACCTAA MRNFGCKILEVISEGLGLGRGYFESEINENPLFQVNHYPPCPNPSLTLGLFQHCDPSLITILFQDINGLQVLKDGQWIDVDPIEDTLLINFGYLLEVISNGKLKATEHRVVTNTQTSRQSLVYLTFPENEVIIEPAKSLINEANPPHYRSIKYKEFIGDYASMSKDRETIIKYLATT
BLAST of Lsi10G002740 vs. Swiss-Prot
Match: HY6H_HYONI (Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H6H PE=1 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 2.8e-35 Identity = 75/174 (43.10%), Postives = 107/174 (61.49%), Query Frame = 1
BLAST of Lsi10G002740 vs. Swiss-Prot
Match: IDS3_HORVU (2'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vulgare GN=IDS3 PE=1 SV=3) HSP 1 Score: 146.0 bits (367), Expect = 4.0e-34 Identity = 67/161 (41.61%), Postives = 102/161 (63.35%), Query Frame = 1
BLAST of Lsi10G002740 vs. Swiss-Prot
Match: IDS2_HORVU (Mugineic-acid 3-dioxygenase OS=Hordeum vulgare GN=IDS2 PE=2 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 7.0e-31 Identity = 66/157 (42.04%), Postives = 96/157 (61.15%), Query Frame = 1
BLAST of Lsi10G002740 vs. Swiss-Prot
Match: DMR6_ARATH (Protein DOWNY MILDEW RESISTANCE 6 OS=Arabidopsis thaliana GN=DMR6 PE=1 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 7.8e-30 Identity = 72/174 (41.38%), Postives = 99/174 (56.90%), Query Frame = 1
BLAST of Lsi10G002740 vs. Swiss-Prot
Match: DLO2_ARATH (Protein DMR6-LIKE OXYGENASE 2 OS=Arabidopsis thaliana GN=DLO2 PE=2 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 2.3e-29 Identity = 69/168 (41.07%), Postives = 100/168 (59.52%), Query Frame = 1
BLAST of Lsi10G002740 vs. TrEMBL
Match: A0A0A0K5H0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G375850 PE=3 SV=1) HSP 1 Score: 251.1 bits (640), Expect = 9.8e-64 Identity = 112/175 (64.00%), Postives = 142/175 (81.14%), Query Frame = 1
BLAST of Lsi10G002740 vs. TrEMBL
Match: A0A0A0K5H3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G378370 PE=3 SV=1) HSP 1 Score: 249.6 bits (636), Expect = 2.8e-63 Identity = 110/176 (62.50%), Postives = 145/176 (82.39%), Query Frame = 1
BLAST of Lsi10G002740 vs. TrEMBL
Match: A0A0A0K745_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G375860 PE=3 SV=1) HSP 1 Score: 243.4 bits (620), Expect = 2.0e-61 Identity = 109/175 (62.29%), Postives = 138/175 (78.86%), Query Frame = 1
BLAST of Lsi10G002740 vs. TrEMBL
Match: A0A0A0K4U9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G376360 PE=3 SV=1) HSP 1 Score: 236.5 bits (602), Expect = 2.5e-59 Identity = 108/174 (62.07%), Postives = 135/174 (77.59%), Query Frame = 1
BLAST of Lsi10G002740 vs. TrEMBL
Match: A0A067FM54_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g048024mg PE=3 SV=1) HSP 1 Score: 201.8 bits (512), Expect = 6.8e-49 Identity = 87/177 (49.15%), Postives = 132/177 (74.58%), Query Frame = 1
BLAST of Lsi10G002740 vs. TAIR10
Match: AT3G19000.1 (AT3G19000.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 132.5 bits (332), Expect = 2.6e-31 Identity = 69/154 (44.81%), Postives = 94/154 (61.04%), Query Frame = 1
BLAST of Lsi10G002740 vs. TAIR10
Match: AT5G24530.1 (AT5G24530.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 131.7 bits (330), Expect = 4.4e-31 Identity = 72/174 (41.38%), Postives = 99/174 (56.90%), Query Frame = 1
BLAST of Lsi10G002740 vs. TAIR10
Match: AT4G10490.1 (AT4G10490.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 130.2 bits (326), Expect = 1.3e-30 Identity = 69/168 (41.07%), Postives = 100/168 (59.52%), Query Frame = 1
BLAST of Lsi10G002740 vs. TAIR10
Match: AT5G59540.1 (AT5G59540.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 126.3 bits (316), Expect = 1.8e-29 Identity = 67/159 (42.14%), Postives = 91/159 (57.23%), Query Frame = 1
BLAST of Lsi10G002740 vs. TAIR10
Match: AT1G06620.1 (AT1G06620.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 125.6 bits (314), Expect = 3.1e-29 Identity = 72/177 (40.68%), Postives = 98/177 (55.37%), Query Frame = 1
BLAST of Lsi10G002740 vs. NCBI nr
Match: gi|449462457|ref|XP_004148957.1| (PREDICTED: hyoscyamine 6-dioxygenase-like [Cucumis sativus]) HSP 1 Score: 251.1 bits (640), Expect = 1.4e-63 Identity = 112/175 (64.00%), Postives = 142/175 (81.14%), Query Frame = 1
BLAST of Lsi10G002740 vs. NCBI nr
Match: gi|449458500|ref|XP_004146985.1| (PREDICTED: hyoscyamine 6-dioxygenase-like [Cucumis sativus]) HSP 1 Score: 249.6 bits (636), Expect = 4.1e-63 Identity = 110/176 (62.50%), Postives = 145/176 (82.39%), Query Frame = 1
BLAST of Lsi10G002740 vs. NCBI nr
Match: gi|659100769|ref|XP_008451257.1| (PREDICTED: hyoscyamine 6-dioxygenase-like [Cucumis melo]) HSP 1 Score: 246.1 bits (627), Expect = 4.5e-62 Identity = 112/175 (64.00%), Postives = 140/175 (80.00%), Query Frame = 1
BLAST of Lsi10G002740 vs. NCBI nr
Match: gi|659100775|ref|XP_008451261.1| (PREDICTED: hyoscyamine 6-dioxygenase-like [Cucumis melo]) HSP 1 Score: 245.7 bits (626), Expect = 5.9e-62 Identity = 109/176 (61.93%), Postives = 142/176 (80.68%), Query Frame = 1
BLAST of Lsi10G002740 vs. NCBI nr
Match: gi|778730376|ref|XP_011659768.1| (PREDICTED: hyoscyamine 6-dioxygenase-like [Cucumis sativus]) HSP 1 Score: 243.4 bits (620), Expect = 2.9e-61 Identity = 109/175 (62.29%), Postives = 138/175 (78.86%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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