Lsi10G002130 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGGCCTTGGAAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGTACGCTTTCGGAGATATACCAGAGTGCGAAGAGGCTGCTGTTGAGGACTAGGGATGGGCTTGAGAAGCTGGAGCGTCTTGAGTACACGGCGGCTAGCGGCTTCGATTCCGCCGATCTTTCCTTCTCGATCAAGAGGGATATTACTCAGATCCAGTCTCTCTGTGTGGAGATGGATAGGCTCTGGCGGTCTGTTGCGGCGAAGTCCCAACGTGATTTGTGGAAAAGGTTCTTCTTCCATTCCCCACCTTTGCGTTTTTTCTGATTGAATTTGTAATTCTACGGTTTCCATGTCATCTTCGGTCGAATTTTGAATTAGATGGTTTTTATTTGTTTTTCTTTTTTGGGTTTTATTCAAAATTGCTCATTCTTTCTGAATTTCTTGTTTTGTTAGTTTATTCAAATGTGATGGATGTTATGTCCTCCTCTTTGTCTGTTGTGACTGTTTGTTTCCTTGGAGTTGAATCATTATTTCTTTCATTCAAGGGAAAAGAGAAAAATGAAATGGGGTGGTCTTTTAGATCCTGGATTGAATATGGGATTGGGAATTAATTGTAATTATGGATGGTCTTACGACTTATGTCCAATTTGATAATGCCTAACCTTGATGTGATACAACTGGGAATTGTTCTGCAGAAAGGTGGAACAGGTTGCTGAGGAGGCTGATTCTATGAAACAAAGTTTGGACAAGTATTTTCTTAGAAACCAGAAGCGGACGATGGAAGCGAAGGAGAGGGCAGAATTGCTTGGAAGAGCTGTATGTACTCATTTTAGCTACTTGTGGCTGAACTCCTTCTTTAGCCTTTCATTTAAGTGGTCTTTGGCTTTGCTTTTGTAGAGTGGTGACTCTGCTCACATTTTAAGAATTTTTGACGATGAGGCACAAGCTATGTACTCGGTTCGAAATTCATCACGGATGTTAGAGGAAGCTAGTGCAACCGGAGAAGCAATCCTTTTCAAATACTCCGAGCAGAGGGACCGCTTAAAGGTGTGTGTTTTTATTTGCTGAGGCTACCGTTAACTGTTAAAACAATATTTGAAGACTATGGATGCATTCCCTTTAAATGTGAATTTGGTGAAGATTCTATACTATATTCATAGTCTCTTGTTGGTCTAGGAGATAGCTGCAGGTATGACGTCTTTGAGTTGTTTTGGAAGCATTGTTTCAATTTTTGGAAGTTGTACTCTACATATGAATATTTACTAGACGTGTCTATATTTTGGCAGTTATAGAGTCTCCTGGAGTAAAAAGCACTTTGATTGGCTTGAGAACATGTGCATTATGCTAATTAATTATTCTAAAAGAATGTTTGACTCACAGTTTTAATAAGTTTTAGTTGATGAAGTCCAACTTCATGTGACCTATGATTAGACAGCGTGGAAAATATGTAATATAGAATTTAGGCGGGCTTGAGTTGAGTTTGCTGTTTTAGTTTGTAACTAGTATCTAGGATTGGATAAAAGAATCTTTGTAATACAAATTTATGGTCTGGGAGATTAGCAATTTTATAACCTAAGATGATGCAAATCTAAACTTATGGCCTGACATTCCTCAAAGGGTTTTGGATGGTGCCATGATCATCATTAATTCTGTACAAAAAGACTTGATTATCTCACTAAACTAAACTACCTTCTTAGTATCATTTGATTGTTTCTCAGACGGAGTAGAACATGCAATTATGAACCGCGGCAGGTTGAAACGAAATCCACAGTTACTTTACTATAGCCTTTGTTGGCTTTACTGCATTGCATTTTGCCCCCCCTCCTATTCATTCATTTCTCTCTCTCATGTTCATTCATTTGTTTTTGTGGTTCAGAGAGCACAAAGGAAGGCACTAGATGTCCTTAACACAGTGGGGCTCTCCAGCTATGTACTGAAACTCATTGAGAGACGGCACCGAGTTGATAATTGGATTAAATATGCAGGCATGATTTTAACCATAGTAATTGTGTTTGTTTTTGTTCGATGGGTACGGTGATTCTCACGCAATGATTGTCATACAATTCAATCGGTGTTGGCTCCTTGAAGGAAGGTACATATTGAAGCTGTTTTAGTTTGACCTCCCAGTGTTAACACCTCTGGAGGTCTCACCATCCAGAAGACAAAAAACTACATACTAAATAGACTACATAGAAAGCACAGCTACTTTGATGATGTCCTCCATGTCGAGCTTTACTTCGCAAGTTTGATAACTCAGCAAGTTTCCAGGTAATTTGCAGTCTCCCTTCTGAGTTGCTATCGTTTAAGTTCTGATTTGAGATGCACGGATCTGTCAGAAGTAGCTTCTTGCTGATGGTGGTGGTGATGCTAGGCTTTTGTAACATTTTATGAACTTTTGAACTTTTTCTGGCTCCTCGGTTCTTTTCTTTATGGATTTTTTTCTTTCAGGATTGTAGTTCAAACATGTGGAGATTTTGAACCTACAACTAGGCTTAATCCAAGCAGTTGAATCGTGTCAGGTTCGTTGGCTCAACATTCTCTATAGTGTTTTTCCAATTTTGGAAGGAATGGTAAATGTTAGGTCCTCAGGCAAAGCCTTAGTTGATGAGTATGGTGTTTAAACTTGAAAGTTGTACTCTTGTGCCTATGCTATTTGACTCCCATATTTGATTTAGAAAGTCCTCAATTCGGTTAAACCCTTGTTTGAAGGCAATCAAATCAAAGGGTTTTTCATAATAAGACTTTATCGTGGATGATCGGTTTGGTTCTTTTCGTCTGAAGGCCTCTTCATAGTGCTCTCTCTCCAAAAGCATTGCAGGATCTACTATTTAAGATATTTATCTTAATTGAAATAATTTTATGTTACCCTCCTAACTTACTTTTGTATTATTGTTCTTTTTATCCTTTTTTTTTTTCATTCTTGTTTACTCTTTGGTGTTGTACTTTTGAGCATTAACCTCTTTTCATTTTATCAATTAAAAGTGTTATTTCAATATATACAAGTACAGAAAGTTCTCAA ATGTCGGCCTTGGAAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGTACGCTTTCGGAGATATACCAGAGTGCGAAGAGGCTGCTGTTGAGGACTAGGGATGGGCTTGAGAAGCTGGAGCGTCTTGAGTACACGGCGGCTAGCGGCTTCGATTCCGCCGATCTTTCCTTCTCGATCAAGAGGGATATTACTCAGATCCAGTCTCTCTGTGTGGAGATGGATAGGCTCTGGCGGTCTGTTGCGGCGAAGTCCCAACGTGATTTGTGGAAAAGAAAGGTGGAACAGGTTGCTGAGGAGGCTGATTCTATGAAACAAAGTTTGGACAAGTATTTTCTTAGAAACCAGAAGCGGACGATGGAAGCGAAGGAGAGGGCAGAATTGCTTGGAAGAGCTAGTGGTGACTCTGCTCACATTTTAAGAATTTTTGACGATGAGGCACAAGCTATGTACTCGGTTCGAAATTCATCACGGATGTTAGAGGAAGCTAGTGCAACCGGAGAAGCAATCCTTTTCAAATACTCCGAGCAGAGGGACCGCTTAAAGAGAGCACAAAGGAAGGCACTAGATGTCCTTAACACAGTGGGGCTCTCCAGCTATGTACTGAAACTCATTGAGAGACGGCACCGAGTTGATAATTGGATTAAATATGCAGGCATGATTTTAACCATAGTAATTGTGTTTGTTTTTGTTCGATGGGTACGTGTTAACACCTCTGGAGGTCTCACCATCCAGAAGACAAAAAACTACATACTAAATAGACTACATAGAAAGCACAGCTACTTTGATGATGTCCTCCATGTCGAGCTTTACTTCGCAAGTTTGATAACTCAGCAAGTTTCCAGGATTGTAGTTCAAACATGTGGAGATTTTGAACCTACAACTAGGCTTAATCCAAGCAGTTGAATCGTGTCAGGTTCGTTGGCTCAACATTCTCTATAGTGTTTTTCCAATTTTGGAAGGAATGGTAAATGTTAGGTCCTCAGGCAAAGCCTTAGTTGATGAGTATGGTGTTTAAACTTGAAAGTTGTACTCTTGTGCCTATGCTATTTGACTCCCATATTTGATTTAGAAAGTCCTCAATTCGGTTAAACCCTTGTTTGAAGGCAATCAAATCAAAGGGTTTTTCATAATAAGACTTTATCGTGGATGATCGGTTTGGTTCTTTTCGTCTGAAGGCCTCTTCATAGTGCTCTCTCTCCAAAAGCATTGCAGGATCTACTATTTAAGATATTTATCTTAATTGAAATAATTTTATGTTACCCTCCTAACTTACTTTTGTATTATTGTTCTTTTTATCCTTTTTTTTTTTCATTCTTGTTTACTCTTTGGTGTTGTACTTTTGAGCATTAACCTCTTTTCATTTTATCAATTAAAAGTGTTATTTCAATATATACAAGTACAGAAAGTTCTCAA ATGTCGGCCTTGGAAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGTACGCTTTCGGAGATATACCAGAGTGCGAAGAGGCTGCTGTTGAGGACTAGGGATGGGCTTGAGAAGCTGGAGCGTCTTGAGTACACGGCGGCTAGCGGCTTCGATTCCGCCGATCTTTCCTTCTCGATCAAGAGGGATATTACTCAGATCCAGTCTCTCTGTGTGGAGATGGATAGGCTCTGGCGGTCTGTTGCGGCGAAGTCCCAACGTGATTTGTGGAAAAGAAAGGTGGAACAGGTTGCTGAGGAGGCTGATTCTATGAAACAAAGTTTGGACAAGTATTTTCTTAGAAACCAGAAGCGGACGATGGAAGCGAAGGAGAGGGCAGAATTGCTTGGAAGAGCTAGTGGTGACTCTGCTCACATTTTAAGAATTTTTGACGATGAGGCACAAGCTATGTACTCGGTTCGAAATTCATCACGGATGTTAGAGGAAGCTAGTGCAACCGGAGAAGCAATCCTTTTCAAATACTCCGAGCAGAGGGACCGCTTAAAGAGAGCACAAAGGAAGGCACTAGATGTCCTTAACACAGTGGGGCTCTCCAGCTATGTACTGAAACTCATTGAGAGACGGCACCGAGTTGATAATTGGATTAAATATGCAGGCATGATTTTAACCATAGTAATTGTGTTTGTTTTTGTTCGATGGGTACGTGTTAACACCTCTGGAGGTCTCACCATCCAGAAGACAAAAAACTACATACTAAATAGACTACATAGAAAGCACAGCTACTTTGATGATGTCCTCCATGTCGAGCTTTACTTCGCAAGTTTGATAACTCAGCAAGTTTCCAGGATTGTAGTTCAAACATGTGGAGATTTTGAACCTACAACTAGGCTTAATCCAAGCAGTTGA MSALEEGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTLSEIYQSAKRLLLRTRDGLEKLERLEYTAASGFDSADLSFSIKRDITQIQSLCVEMDRLWRSVAAKSQRDLWKRKVEQVAEEADSMKQSLDKYFLRNQKRTMEAKERAELLGRASGDSAHILRIFDDEAQAMYSVRNSSRMLEEASATGEAILFKYSEQRDRLKRAQRKALDVLNTVGLSSYVLKLIERRHRVDNWIKYAGMILTIVIVFVFVRWVRVNTSGGLTIQKTKNYILNRLHRKHSYFDDVLHVELYFASLITQQVSRIVVQTCGDFEPTTRLNPSS
BLAST of Lsi10G002130 vs. Swiss-Prot
Match: MEM11_ARATH (Membrin-11 OS=Arabidopsis thaliana GN=MEMB11 PE=1 SV=1) HSP 1 Score: 294.7 bits (753), Expect = 1.5e-78 Identity = 149/221 (67.42%), Postives = 187/221 (84.62%), Query Frame = 1
BLAST of Lsi10G002130 vs. Swiss-Prot
Match: MEM12_ARATH (Membrin-12 OS=Arabidopsis thaliana GN=MEMB12 PE=2 SV=1) HSP 1 Score: 280.8 bits (717), Expect = 2.3e-74 Identity = 146/222 (65.77%), Postives = 180/222 (81.08%), Query Frame = 1
BLAST of Lsi10G002130 vs. TrEMBL
Match: A0A0A0KWL2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G188920 PE=4 SV=1) HSP 1 Score: 395.6 bits (1015), Expect = 7.1e-107 Identity = 210/223 (94.17%), Postives = 216/223 (96.86%), Query Frame = 1
BLAST of Lsi10G002130 vs. TrEMBL
Match: A0A067FRK5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027099mg PE=4 SV=1) HSP 1 Score: 332.8 bits (852), Expect = 5.7e-88 Identity = 171/222 (77.03%), Postives = 202/222 (90.99%), Query Frame = 1
BLAST of Lsi10G002130 vs. TrEMBL
Match: V4T8X2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022078mg PE=4 SV=1) HSP 1 Score: 330.5 bits (846), Expect = 2.8e-87 Identity = 170/222 (76.58%), Postives = 201/222 (90.54%), Query Frame = 1
BLAST of Lsi10G002130 vs. TrEMBL
Match: A0A061F7M2_THECC (Membrin, putative OS=Theobroma cacao GN=TCM_025855 PE=4 SV=1) HSP 1 Score: 327.0 bits (837), Expect = 3.1e-86 Identity = 165/223 (73.99%), Postives = 200/223 (89.69%), Query Frame = 1
BLAST of Lsi10G002130 vs. TrEMBL
Match: A0A059A1U9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K01520 PE=4 SV=1) HSP 1 Score: 325.1 bits (832), Expect = 1.2e-85 Identity = 173/231 (74.89%), Postives = 199/231 (86.15%), Query Frame = 1
BLAST of Lsi10G002130 vs. TAIR10
Match: AT2G36900.1 (AT2G36900.1 membrin 11) HSP 1 Score: 294.7 bits (753), Expect = 8.6e-80 Identity = 149/221 (67.42%), Postives = 187/221 (84.62%), Query Frame = 1
BLAST of Lsi10G002130 vs. TAIR10
Match: AT5G50440.1 (AT5G50440.1 membrin 12) HSP 1 Score: 280.8 bits (717), Expect = 1.3e-75 Identity = 146/222 (65.77%), Postives = 180/222 (81.08%), Query Frame = 1
BLAST of Lsi10G002130 vs. NCBI nr
Match: gi|449462766|ref|XP_004149111.1| (PREDICTED: membrin-11 [Cucumis sativus]) HSP 1 Score: 395.6 bits (1015), Expect = 1.0e-106 Identity = 210/223 (94.17%), Postives = 216/223 (96.86%), Query Frame = 1
BLAST of Lsi10G002130 vs. NCBI nr
Match: gi|659082731|ref|XP_008442003.1| (PREDICTED: membrin-11 [Cucumis melo]) HSP 1 Score: 383.6 bits (984), Expect = 4.0e-103 Identity = 204/216 (94.44%), Postives = 210/216 (97.22%), Query Frame = 1
BLAST of Lsi10G002130 vs. NCBI nr
Match: gi|1009114041|ref|XP_015873470.1| (PREDICTED: membrin-11-like [Ziziphus jujuba]) HSP 1 Score: 347.1 bits (889), Expect = 4.2e-92 Identity = 177/221 (80.09%), Postives = 202/221 (91.40%), Query Frame = 1
BLAST of Lsi10G002130 vs. NCBI nr
Match: gi|702246417|ref|XP_010054848.1| (PREDICTED: membrin-11-like [Eucalyptus grandis]) HSP 1 Score: 337.4 bits (864), Expect = 3.3e-89 Identity = 180/235 (76.60%), Postives = 204/235 (86.81%), Query Frame = 1
BLAST of Lsi10G002130 vs. NCBI nr
Match: gi|641847206|gb|KDO66087.1| (hypothetical protein CISIN_1g027099mg [Citrus sinensis]) HSP 1 Score: 332.8 bits (852), Expect = 8.1e-88 Identity = 171/222 (77.03%), Postives = 202/222 (90.99%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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