Lsi10G002130 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi10G002130
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionGolgi SNAP receptor complex member 2
Locationchr10 : 3499648 .. 3502927 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGGCCTTGGAAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGTACGCTTTCGGAGATATACCAGAGTGCGAAGAGGCTGCTGTTGAGGACTAGGGATGGGCTTGAGAAGCTGGAGCGTCTTGAGTACACGGCGGCTAGCGGCTTCGATTCCGCCGATCTTTCCTTCTCGATCAAGAGGGATATTACTCAGATCCAGTCTCTCTGTGTGGAGATGGATAGGCTCTGGCGGTCTGTTGCGGCGAAGTCCCAACGTGATTTGTGGAAAAGGTTCTTCTTCCATTCCCCACCTTTGCGTTTTTTCTGATTGAATTTGTAATTCTACGGTTTCCATGTCATCTTCGGTCGAATTTTGAATTAGATGGTTTTTATTTGTTTTTCTTTTTTGGGTTTTATTCAAAATTGCTCATTCTTTCTGAATTTCTTGTTTTGTTAGTTTATTCAAATGTGATGGATGTTATGTCCTCCTCTTTGTCTGTTGTGACTGTTTGTTTCCTTGGAGTTGAATCATTATTTCTTTCATTCAAGGGAAAAGAGAAAAATGAAATGGGGTGGTCTTTTAGATCCTGGATTGAATATGGGATTGGGAATTAATTGTAATTATGGATGGTCTTACGACTTATGTCCAATTTGATAATGCCTAACCTTGATGTGATACAACTGGGAATTGTTCTGCAGAAAGGTGGAACAGGTTGCTGAGGAGGCTGATTCTATGAAACAAAGTTTGGACAAGTATTTTCTTAGAAACCAGAAGCGGACGATGGAAGCGAAGGAGAGGGCAGAATTGCTTGGAAGAGCTGTATGTACTCATTTTAGCTACTTGTGGCTGAACTCCTTCTTTAGCCTTTCATTTAAGTGGTCTTTGGCTTTGCTTTTGTAGAGTGGTGACTCTGCTCACATTTTAAGAATTTTTGACGATGAGGCACAAGCTATGTACTCGGTTCGAAATTCATCACGGATGTTAGAGGAAGCTAGTGCAACCGGAGAAGCAATCCTTTTCAAATACTCCGAGCAGAGGGACCGCTTAAAGGTGTGTGTTTTTATTTGCTGAGGCTACCGTTAACTGTTAAAACAATATTTGAAGACTATGGATGCATTCCCTTTAAATGTGAATTTGGTGAAGATTCTATACTATATTCATAGTCTCTTGTTGGTCTAGGAGATAGCTGCAGGTATGACGTCTTTGAGTTGTTTTGGAAGCATTGTTTCAATTTTTGGAAGTTGTACTCTACATATGAATATTTACTAGACGTGTCTATATTTTGGCAGTTATAGAGTCTCCTGGAGTAAAAAGCACTTTGATTGGCTTGAGAACATGTGCATTATGCTAATTAATTATTCTAAAAGAATGTTTGACTCACAGTTTTAATAAGTTTTAGTTGATGAAGTCCAACTTCATGTGACCTATGATTAGACAGCGTGGAAAATATGTAATATAGAATTTAGGCGGGCTTGAGTTGAGTTTGCTGTTTTAGTTTGTAACTAGTATCTAGGATTGGATAAAAGAATCTTTGTAATACAAATTTATGGTCTGGGAGATTAGCAATTTTATAACCTAAGATGATGCAAATCTAAACTTATGGCCTGACATTCCTCAAAGGGTTTTGGATGGTGCCATGATCATCATTAATTCTGTACAAAAAGACTTGATTATCTCACTAAACTAAACTACCTTCTTAGTATCATTTGATTGTTTCTCAGACGGAGTAGAACATGCAATTATGAACCGCGGCAGGTTGAAACGAAATCCACAGTTACTTTACTATAGCCTTTGTTGGCTTTACTGCATTGCATTTTGCCCCCCCTCCTATTCATTCATTTCTCTCTCTCATGTTCATTCATTTGTTTTTGTGGTTCAGAGAGCACAAAGGAAGGCACTAGATGTCCTTAACACAGTGGGGCTCTCCAGCTATGTACTGAAACTCATTGAGAGACGGCACCGAGTTGATAATTGGATTAAATATGCAGGCATGATTTTAACCATAGTAATTGTGTTTGTTTTTGTTCGATGGGTACGGTGATTCTCACGCAATGATTGTCATACAATTCAATCGGTGTTGGCTCCTTGAAGGAAGGTACATATTGAAGCTGTTTTAGTTTGACCTCCCAGTGTTAACACCTCTGGAGGTCTCACCATCCAGAAGACAAAAAACTACATACTAAATAGACTACATAGAAAGCACAGCTACTTTGATGATGTCCTCCATGTCGAGCTTTACTTCGCAAGTTTGATAACTCAGCAAGTTTCCAGGTAATTTGCAGTCTCCCTTCTGAGTTGCTATCGTTTAAGTTCTGATTTGAGATGCACGGATCTGTCAGAAGTAGCTTCTTGCTGATGGTGGTGGTGATGCTAGGCTTTTGTAACATTTTATGAACTTTTGAACTTTTTCTGGCTCCTCGGTTCTTTTCTTTATGGATTTTTTTCTTTCAGGATTGTAGTTCAAACATGTGGAGATTTTGAACCTACAACTAGGCTTAATCCAAGCAGTTGAATCGTGTCAGGTTCGTTGGCTCAACATTCTCTATAGTGTTTTTCCAATTTTGGAAGGAATGGTAAATGTTAGGTCCTCAGGCAAAGCCTTAGTTGATGAGTATGGTGTTTAAACTTGAAAGTTGTACTCTTGTGCCTATGCTATTTGACTCCCATATTTGATTTAGAAAGTCCTCAATTCGGTTAAACCCTTGTTTGAAGGCAATCAAATCAAAGGGTTTTTCATAATAAGACTTTATCGTGGATGATCGGTTTGGTTCTTTTCGTCTGAAGGCCTCTTCATAGTGCTCTCTCTCCAAAAGCATTGCAGGATCTACTATTTAAGATATTTATCTTAATTGAAATAATTTTATGTTACCCTCCTAACTTACTTTTGTATTATTGTTCTTTTTATCCTTTTTTTTTTTCATTCTTGTTTACTCTTTGGTGTTGTACTTTTGAGCATTAACCTCTTTTCATTTTATCAATTAAAAGTGTTATTTCAATATATACAAGTACAGAAAGTTCTCAA

mRNA sequence

ATGTCGGCCTTGGAAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGTACGCTTTCGGAGATATACCAGAGTGCGAAGAGGCTGCTGTTGAGGACTAGGGATGGGCTTGAGAAGCTGGAGCGTCTTGAGTACACGGCGGCTAGCGGCTTCGATTCCGCCGATCTTTCCTTCTCGATCAAGAGGGATATTACTCAGATCCAGTCTCTCTGTGTGGAGATGGATAGGCTCTGGCGGTCTGTTGCGGCGAAGTCCCAACGTGATTTGTGGAAAAGAAAGGTGGAACAGGTTGCTGAGGAGGCTGATTCTATGAAACAAAGTTTGGACAAGTATTTTCTTAGAAACCAGAAGCGGACGATGGAAGCGAAGGAGAGGGCAGAATTGCTTGGAAGAGCTAGTGGTGACTCTGCTCACATTTTAAGAATTTTTGACGATGAGGCACAAGCTATGTACTCGGTTCGAAATTCATCACGGATGTTAGAGGAAGCTAGTGCAACCGGAGAAGCAATCCTTTTCAAATACTCCGAGCAGAGGGACCGCTTAAAGAGAGCACAAAGGAAGGCACTAGATGTCCTTAACACAGTGGGGCTCTCCAGCTATGTACTGAAACTCATTGAGAGACGGCACCGAGTTGATAATTGGATTAAATATGCAGGCATGATTTTAACCATAGTAATTGTGTTTGTTTTTGTTCGATGGGTACGTGTTAACACCTCTGGAGGTCTCACCATCCAGAAGACAAAAAACTACATACTAAATAGACTACATAGAAAGCACAGCTACTTTGATGATGTCCTCCATGTCGAGCTTTACTTCGCAAGTTTGATAACTCAGCAAGTTTCCAGGATTGTAGTTCAAACATGTGGAGATTTTGAACCTACAACTAGGCTTAATCCAAGCAGTTGAATCGTGTCAGGTTCGTTGGCTCAACATTCTCTATAGTGTTTTTCCAATTTTGGAAGGAATGGTAAATGTTAGGTCCTCAGGCAAAGCCTTAGTTGATGAGTATGGTGTTTAAACTTGAAAGTTGTACTCTTGTGCCTATGCTATTTGACTCCCATATTTGATTTAGAAAGTCCTCAATTCGGTTAAACCCTTGTTTGAAGGCAATCAAATCAAAGGGTTTTTCATAATAAGACTTTATCGTGGATGATCGGTTTGGTTCTTTTCGTCTGAAGGCCTCTTCATAGTGCTCTCTCTCCAAAAGCATTGCAGGATCTACTATTTAAGATATTTATCTTAATTGAAATAATTTTATGTTACCCTCCTAACTTACTTTTGTATTATTGTTCTTTTTATCCTTTTTTTTTTTCATTCTTGTTTACTCTTTGGTGTTGTACTTTTGAGCATTAACCTCTTTTCATTTTATCAATTAAAAGTGTTATTTCAATATATACAAGTACAGAAAGTTCTCAA

Coding sequence (CDS)

ATGTCGGCCTTGGAAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGTACGCTTTCGGAGATATACCAGAGTGCGAAGAGGCTGCTGTTGAGGACTAGGGATGGGCTTGAGAAGCTGGAGCGTCTTGAGTACACGGCGGCTAGCGGCTTCGATTCCGCCGATCTTTCCTTCTCGATCAAGAGGGATATTACTCAGATCCAGTCTCTCTGTGTGGAGATGGATAGGCTCTGGCGGTCTGTTGCGGCGAAGTCCCAACGTGATTTGTGGAAAAGAAAGGTGGAACAGGTTGCTGAGGAGGCTGATTCTATGAAACAAAGTTTGGACAAGTATTTTCTTAGAAACCAGAAGCGGACGATGGAAGCGAAGGAGAGGGCAGAATTGCTTGGAAGAGCTAGTGGTGACTCTGCTCACATTTTAAGAATTTTTGACGATGAGGCACAAGCTATGTACTCGGTTCGAAATTCATCACGGATGTTAGAGGAAGCTAGTGCAACCGGAGAAGCAATCCTTTTCAAATACTCCGAGCAGAGGGACCGCTTAAAGAGAGCACAAAGGAAGGCACTAGATGTCCTTAACACAGTGGGGCTCTCCAGCTATGTACTGAAACTCATTGAGAGACGGCACCGAGTTGATAATTGGATTAAATATGCAGGCATGATTTTAACCATAGTAATTGTGTTTGTTTTTGTTCGATGGGTACGTGTTAACACCTCTGGAGGTCTCACCATCCAGAAGACAAAAAACTACATACTAAATAGACTACATAGAAAGCACAGCTACTTTGATGATGTCCTCCATGTCGAGCTTTACTTCGCAAGTTTGATAACTCAGCAAGTTTCCAGGATTGTAGTTCAAACATGTGGAGATTTTGAACCTACAACTAGGCTTAATCCAAGCAGTTGA

Protein sequence

MSALEEGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTLSEIYQSAKRLLLRTRDGLEKLERLEYTAASGFDSADLSFSIKRDITQIQSLCVEMDRLWRSVAAKSQRDLWKRKVEQVAEEADSMKQSLDKYFLRNQKRTMEAKERAELLGRASGDSAHILRIFDDEAQAMYSVRNSSRMLEEASATGEAILFKYSEQRDRLKRAQRKALDVLNTVGLSSYVLKLIERRHRVDNWIKYAGMILTIVIVFVFVRWVRVNTSGGLTIQKTKNYILNRLHRKHSYFDDVLHVELYFASLITQQVSRIVVQTCGDFEPTTRLNPSS
BLAST of Lsi10G002130 vs. Swiss-Prot
Match: MEM11_ARATH (Membrin-11 OS=Arabidopsis thaliana GN=MEMB11 PE=1 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 1.5e-78
Identity = 149/221 (67.42%), Postives = 187/221 (84.62%), Query Frame = 1

Query: 106 GGGTLSEIYQSAKRLLLRTRDGLEKLERLEYTAASGFDSADLSFSIKRDITQIQSLCVEM 165
           GGG+LS++Y SAKR+LL+ RDG+E+LER E   +S  DS DL+ S+KRDIT+++SLC  M
Sbjct: 8   GGGSLSDVYSSAKRILLKARDGIERLERFE---SSSMDSPDLASSVKRDITEVRSLCSNM 67

Query: 166 DRLWRSVAAKSQRDLWKRKVEQVAEEADSMKQSLDKYFLRNQKRTMEAKERAELLGRASG 225
           D LWRS+  KSQRDLW+RK EQV EEA+ +  SL+KY  RNQ++ +EAKERA+LLGRASG
Sbjct: 68  DTLWRSIPVKSQRDLWRRKTEQVGEEAEYLNLSLEKYMSRNQRKMLEAKERADLLGRASG 127

Query: 226 DSAHILRIFDDEAQAMYSVRNSSRMLEEASATGEAILFKYSEQRDRLKRAQRKALDVLNT 285
           + AHIL+IFD+EAQAM SV+NS RMLEE+ ++G AIL KY+EQRDRLK AQRKALDVLNT
Sbjct: 128 EGAHILQIFDEEAQAMSSVKNSKRMLEESFSSGVAILSKYAEQRDRLKSAQRKALDVLNT 187

Query: 286 VGLSSYVLKLIERRHRVDNWIKYAGMILTIVIVFVFVRWVR 327
           VGLS+ VL+LIERR+RVD WIKYAGMI T+VI+++F+RW R
Sbjct: 188 VGLSNSVLRLIERRNRVDTWIKYAGMIATLVILYLFIRWTR 225

BLAST of Lsi10G002130 vs. Swiss-Prot
Match: MEM12_ARATH (Membrin-12 OS=Arabidopsis thaliana GN=MEMB12 PE=2 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 2.3e-74
Identity = 146/222 (65.77%), Postives = 180/222 (81.08%), Query Frame = 1

Query: 105 GGGGTLSEIYQSAKRLLLRTRDGLEKLERLEYTAASGFDSADLSFSIKRDITQIQSLCVE 164
           G  G LSE+Y SAKR+LLR R+G+EKLER +       D  DL+ S+KRDIT++QSLC  
Sbjct: 4   GTVGGLSEVYSSAKRILLRARNGIEKLERFDS------DPTDLASSVKRDITEVQSLCSN 63

Query: 165 MDRLWRSVAAKSQRDLWKRKVEQVAEEADSMKQSLDKYFLRNQKRTMEAKERAELLGRAS 224
           MD LWRS+  KSQRDLW+RK EQV EEA+ + QSL+KY  RNQ++ +EAKERA+LLGR S
Sbjct: 64  MDGLWRSIPVKSQRDLWRRKSEQVGEEAEYLNQSLEKYMWRNQRKMLEAKERADLLGRGS 123

Query: 225 GDSAHILRIFDDEAQAMYSVRNSSRMLEEASATGEAILFKYSEQRDRLKRAQRKALDVLN 284
           G+ AHIL+IFD+EAQ M SV+NS RMLE++  +G AIL KY+EQRDRLK AQRKALDVLN
Sbjct: 124 GEGAHILQIFDEEAQGMNSVKNSKRMLEDSFQSGVAILSKYAEQRDRLKSAQRKALDVLN 183

Query: 285 TVGLSSYVLKLIERRHRVDNWIKYAGMILTIVIVFVFVRWVR 327
           TVGLS+ VL+LIERR+RVD WIKYAGMI T+VI+++F+RW R
Sbjct: 184 TVGLSNSVLRLIERRNRVDTWIKYAGMIATLVILYLFIRWTR 219

BLAST of Lsi10G002130 vs. TrEMBL
Match: A0A0A0KWL2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G188920 PE=4 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 7.1e-107
Identity = 210/223 (94.17%), Postives = 216/223 (96.86%), Query Frame = 1

Query: 104 GGGGGTLSEIYQSAKRLLLRTRDGLEKLERLEYTAASGFDSADLSFSIKRDITQIQSLCV 163
           GGGGGTLSEIYQSAKRLLLRTRDGLEKLERLEY+AASG DS +LSFSIK+DITQIQSLCV
Sbjct: 6   GGGGGTLSEIYQSAKRLLLRTRDGLEKLERLEYSAASGMDSPELSFSIKKDITQIQSLCV 65

Query: 164 EMDRLWRSVAAKSQRDLWKRKVEQVAEEADSMKQSLDKYFLRNQKRTMEAKERAELLGRA 223
           EMDRLWRS+AAKSQRDLWKRKVEQVAEEADSMKQSLDKYFLRNQKR  EAKERAELLGRA
Sbjct: 66  EMDRLWRSIAAKSQRDLWKRKVEQVAEEADSMKQSLDKYFLRNQKRMTEAKERAELLGRA 125

Query: 224 SGDSAHILRIFDDEAQAMYSVRNSSRMLEEASATGEAILFKYSEQRDRLKRAQRKALDVL 283
           SGDSAHILRIFDDEAQAM SVRNSSRMLEEASATGEAILFKYSEQRDRLKRAQRKALDVL
Sbjct: 126 SGDSAHILRIFDDEAQAMNSVRNSSRMLEEASATGEAILFKYSEQRDRLKRAQRKALDVL 185

Query: 284 NTVGLSSYVLKLIERRHRVDNWIKYAGMILTIVIVFVFVRWVR 327
           NTVGLS+ VLKLIERRHRVDNWIKYAGMILTIV+VF FVRWVR
Sbjct: 186 NTVGLSNSVLKLIERRHRVDNWIKYAGMILTIVVVFFFVRWVR 228

BLAST of Lsi10G002130 vs. TrEMBL
Match: A0A067FRK5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027099mg PE=4 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 5.7e-88
Identity = 171/222 (77.03%), Postives = 202/222 (90.99%), Query Frame = 1

Query: 106 GGGTLSEIYQSAKRLLLRTRDGLEKLERLEY-TAASGFDSADLSFSIKRDITQIQSLCVE 165
           GGGTLSEIYQSAK+LLLR RDG+EKLERLE  T+  G+DS +LSF++K+DI+QIQSLCVE
Sbjct: 7   GGGTLSEIYQSAKKLLLRARDGVEKLERLESSTSTGGYDSPELSFAVKKDISQIQSLCVE 66

Query: 166 MDRLWRSVAAKSQRDLWKRKVEQVAEEADSMKQSLDKYFLRNQKRTMEAKERAELLGRAS 225
           MDRLWRS+AAKSQRDLWKRKVEQVAEEA+S+K+SLDKYFLRNQ+R  EA+ERAELLGRA+
Sbjct: 67  MDRLWRSIAAKSQRDLWKRKVEQVAEEAESLKESLDKYFLRNQRRINEARERAELLGRAN 126

Query: 226 GDSAHILRIFDDEAQAMYSVRNSSRMLEEASATGEAILFKYSEQRDRLKRAQRKALDVLN 285
           G+S+HILRIFD+EAQAM SVRNSSRML+E+ ATG AIL KY+EQR+ LK+AQRKALDVLN
Sbjct: 127 GESSHILRIFDEEAQAMQSVRNSSRMLQESFATGTAILAKYAEQREHLKKAQRKALDVLN 186

Query: 286 TVGLSSYVLKLIERRHRVDNWIKYAGMILTIVIVFVFVRWVR 327
           TVGLS+ VL+LIERR+RVD WIKY GM+ T+VI++ F RW R
Sbjct: 187 TVGLSNSVLRLIERRNRVDTWIKYVGMVSTVVILYFFWRWTR 228

BLAST of Lsi10G002130 vs. TrEMBL
Match: V4T8X2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022078mg PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 2.8e-87
Identity = 170/222 (76.58%), Postives = 201/222 (90.54%), Query Frame = 1

Query: 106 GGGTLSEIYQSAKRLLLRTRDGLEKLERLEY-TAASGFDSADLSFSIKRDITQIQSLCVE 165
           GGGTLSEIYQSAK+LLLR RDG+EKLERLE  T+  G+DS +LSF++K+DI+QIQSLCVE
Sbjct: 7   GGGTLSEIYQSAKKLLLRARDGVEKLERLESSTSTGGYDSPELSFAVKKDISQIQSLCVE 66

Query: 166 MDRLWRSVAAKSQRDLWKRKVEQVAEEADSMKQSLDKYFLRNQKRTMEAKERAELLGRAS 225
           MDRLWRS+A KSQRDLWKRKVEQVAEEA+S+K+SLDKYFLRNQ+R  EA+ERAELLGRA+
Sbjct: 67  MDRLWRSIADKSQRDLWKRKVEQVAEEAESLKESLDKYFLRNQRRINEARERAELLGRAN 126

Query: 226 GDSAHILRIFDDEAQAMYSVRNSSRMLEEASATGEAILFKYSEQRDRLKRAQRKALDVLN 285
           G+S+HILRIFD+EAQAM SVRNSSRML+E+ ATG AIL KY+EQR+ LK+AQRKALDVLN
Sbjct: 127 GESSHILRIFDEEAQAMQSVRNSSRMLQESFATGTAILAKYAEQREHLKKAQRKALDVLN 186

Query: 286 TVGLSSYVLKLIERRHRVDNWIKYAGMILTIVIVFVFVRWVR 327
           TVGLS+ VL+LIERR+RVD WIKY GM+ T+VI++ F RW R
Sbjct: 187 TVGLSNSVLRLIERRNRVDTWIKYVGMVSTVVILYFFWRWTR 228

BLAST of Lsi10G002130 vs. TrEMBL
Match: A0A061F7M2_THECC (Membrin, putative OS=Theobroma cacao GN=TCM_025855 PE=4 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 3.1e-86
Identity = 165/223 (73.99%), Postives = 200/223 (89.69%), Query Frame = 1

Query: 106 GGGTLSEIYQSAKRLLLRTRDGLEKLERLE--YTAASGFDSADLSFSIKRDITQIQSLCV 165
           GGGTLSE+YQSA++LLLR RDG+E+LERLE   +A  G DS +LSF++K+DI+QI SLC 
Sbjct: 6   GGGTLSEVYQSARKLLLRARDGIERLERLESSVSAGGGLDSPELSFAVKKDISQIHSLCS 65

Query: 166 EMDRLWRSVAAKSQRDLWKRKVEQVAEEADSMKQSLDKYFLRNQKRTMEAKERAELLGRA 225
           +MDRLWRS+AAKSQRDLWKRKVEQ+ EEADS+K+SLDKY +RNQ+R +EAKERAELLGRA
Sbjct: 66  DMDRLWRSIAAKSQRDLWKRKVEQMVEEADSLKESLDKYSMRNQRRMLEAKERAELLGRA 125

Query: 226 SGDSAHILRIFDDEAQAMYSVRNSSRMLEEASATGEAILFKYSEQRDRLKRAQRKALDVL 285
           +G+SAH+LRIFD+EAQAM SVRNSSRML+E+ ATG AIL KYSEQR+RLKRAQRKALDVL
Sbjct: 126 NGESAHVLRIFDEEAQAMQSVRNSSRMLQESFATGTAILSKYSEQRERLKRAQRKALDVL 185

Query: 286 NTVGLSSYVLKLIERRHRVDNWIKYAGMILTIVIVFVFVRWVR 327
           NTVGLS+ VL+LIERR+RVD WIKY GM+LT++I++ F +W R
Sbjct: 186 NTVGLSNSVLRLIERRNRVDRWIKYVGMVLTVIILYFFWKWTR 228

BLAST of Lsi10G002130 vs. TrEMBL
Match: A0A059A1U9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K01520 PE=4 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 1.2e-85
Identity = 173/231 (74.89%), Postives = 199/231 (86.15%), Query Frame = 1

Query: 102 GGGGGGGTLSEIYQSAKRLLLRTRDGLEKLERLEYTA------ASGFDSADLSFSIKRDI 161
           GG GGGGTLSE+YQSAKRLLLRTRD LE+LERLE +A      A G DS +LS SI+RD+
Sbjct: 3   GGAGGGGTLSEVYQSAKRLLLRTRDALERLERLECSATAAAAAAGGLDSPELSASIRRDV 62

Query: 162 TQIQSLCVEMDRLWRSVAAKSQRDLWKRKVEQVAEEADSMKQSLDKYFLRNQKRTMEAKE 221
            QIQSLC+EMDRLWR + AKSQRDLW+RKVEQVAEEA+S+K SLDKY  RNQ++ MEAKE
Sbjct: 63  VQIQSLCIEMDRLWRFLGAKSQRDLWRRKVEQVAEEAESLKVSLDKYSSRNQQKMMEAKE 122

Query: 222 RAELLGRASGDSAHILRIFDDEAQAMYSVRNSSRMLEEASATGEAILFKYSEQRDRLKRA 281
           RAELLGRA+GDSAH+L IFD+EAQAM S RNSSRMLEE+ ATG AIL KYSEQR+RLK+A
Sbjct: 123 RAELLGRANGDSAHVLSIFDEEAQAMQSARNSSRMLEESYATGVAILSKYSEQRERLKKA 182

Query: 282 QRKALDVLNTVGLSSYVLKLIERRHRVDNWIKYAGMILTIVIVFVFVRWVR 327
           QR+ALD+LNTVGLS+ VLKLIERRH VD WIKYAGMILT++I++ F RW R
Sbjct: 183 QRRALDILNTVGLSNSVLKLIERRHHVDKWIKYAGMILTLIILYAFWRWTR 233

BLAST of Lsi10G002130 vs. TAIR10
Match: AT2G36900.1 (AT2G36900.1 membrin 11)

HSP 1 Score: 294.7 bits (753), Expect = 8.6e-80
Identity = 149/221 (67.42%), Postives = 187/221 (84.62%), Query Frame = 1

Query: 106 GGGTLSEIYQSAKRLLLRTRDGLEKLERLEYTAASGFDSADLSFSIKRDITQIQSLCVEM 165
           GGG+LS++Y SAKR+LL+ RDG+E+LER E   +S  DS DL+ S+KRDIT+++SLC  M
Sbjct: 8   GGGSLSDVYSSAKRILLKARDGIERLERFE---SSSMDSPDLASSVKRDITEVRSLCSNM 67

Query: 166 DRLWRSVAAKSQRDLWKRKVEQVAEEADSMKQSLDKYFLRNQKRTMEAKERAELLGRASG 225
           D LWRS+  KSQRDLW+RK EQV EEA+ +  SL+KY  RNQ++ +EAKERA+LLGRASG
Sbjct: 68  DTLWRSIPVKSQRDLWRRKTEQVGEEAEYLNLSLEKYMSRNQRKMLEAKERADLLGRASG 127

Query: 226 DSAHILRIFDDEAQAMYSVRNSSRMLEEASATGEAILFKYSEQRDRLKRAQRKALDVLNT 285
           + AHIL+IFD+EAQAM SV+NS RMLEE+ ++G AIL KY+EQRDRLK AQRKALDVLNT
Sbjct: 128 EGAHILQIFDEEAQAMSSVKNSKRMLEESFSSGVAILSKYAEQRDRLKSAQRKALDVLNT 187

Query: 286 VGLSSYVLKLIERRHRVDNWIKYAGMILTIVIVFVFVRWVR 327
           VGLS+ VL+LIERR+RVD WIKYAGMI T+VI+++F+RW R
Sbjct: 188 VGLSNSVLRLIERRNRVDTWIKYAGMIATLVILYLFIRWTR 225

BLAST of Lsi10G002130 vs. TAIR10
Match: AT5G50440.1 (AT5G50440.1 membrin 12)

HSP 1 Score: 280.8 bits (717), Expect = 1.3e-75
Identity = 146/222 (65.77%), Postives = 180/222 (81.08%), Query Frame = 1

Query: 105 GGGGTLSEIYQSAKRLLLRTRDGLEKLERLEYTAASGFDSADLSFSIKRDITQIQSLCVE 164
           G  G LSE+Y SAKR+LLR R+G+EKLER +       D  DL+ S+KRDIT++QSLC  
Sbjct: 4   GTVGGLSEVYSSAKRILLRARNGIEKLERFDS------DPTDLASSVKRDITEVQSLCSN 63

Query: 165 MDRLWRSVAAKSQRDLWKRKVEQVAEEADSMKQSLDKYFLRNQKRTMEAKERAELLGRAS 224
           MD LWRS+  KSQRDLW+RK EQV EEA+ + QSL+KY  RNQ++ +EAKERA+LLGR S
Sbjct: 64  MDGLWRSIPVKSQRDLWRRKSEQVGEEAEYLNQSLEKYMWRNQRKMLEAKERADLLGRGS 123

Query: 225 GDSAHILRIFDDEAQAMYSVRNSSRMLEEASATGEAILFKYSEQRDRLKRAQRKALDVLN 284
           G+ AHIL+IFD+EAQ M SV+NS RMLE++  +G AIL KY+EQRDRLK AQRKALDVLN
Sbjct: 124 GEGAHILQIFDEEAQGMNSVKNSKRMLEDSFQSGVAILSKYAEQRDRLKSAQRKALDVLN 183

Query: 285 TVGLSSYVLKLIERRHRVDNWIKYAGMILTIVIVFVFVRWVR 327
           TVGLS+ VL+LIERR+RVD WIKYAGMI T+VI+++F+RW R
Sbjct: 184 TVGLSNSVLRLIERRNRVDTWIKYAGMIATLVILYLFIRWTR 219

BLAST of Lsi10G002130 vs. NCBI nr
Match: gi|449462766|ref|XP_004149111.1| (PREDICTED: membrin-11 [Cucumis sativus])

HSP 1 Score: 395.6 bits (1015), Expect = 1.0e-106
Identity = 210/223 (94.17%), Postives = 216/223 (96.86%), Query Frame = 1

Query: 104 GGGGGTLSEIYQSAKRLLLRTRDGLEKLERLEYTAASGFDSADLSFSIKRDITQIQSLCV 163
           GGGGGTLSEIYQSAKRLLLRTRDGLEKLERLEY+AASG DS +LSFSIK+DITQIQSLCV
Sbjct: 6   GGGGGTLSEIYQSAKRLLLRTRDGLEKLERLEYSAASGMDSPELSFSIKKDITQIQSLCV 65

Query: 164 EMDRLWRSVAAKSQRDLWKRKVEQVAEEADSMKQSLDKYFLRNQKRTMEAKERAELLGRA 223
           EMDRLWRS+AAKSQRDLWKRKVEQVAEEADSMKQSLDKYFLRNQKR  EAKERAELLGRA
Sbjct: 66  EMDRLWRSIAAKSQRDLWKRKVEQVAEEADSMKQSLDKYFLRNQKRMTEAKERAELLGRA 125

Query: 224 SGDSAHILRIFDDEAQAMYSVRNSSRMLEEASATGEAILFKYSEQRDRLKRAQRKALDVL 283
           SGDSAHILRIFDDEAQAM SVRNSSRMLEEASATGEAILFKYSEQRDRLKRAQRKALDVL
Sbjct: 126 SGDSAHILRIFDDEAQAMNSVRNSSRMLEEASATGEAILFKYSEQRDRLKRAQRKALDVL 185

Query: 284 NTVGLSSYVLKLIERRHRVDNWIKYAGMILTIVIVFVFVRWVR 327
           NTVGLS+ VLKLIERRHRVDNWIKYAGMILTIV+VF FVRWVR
Sbjct: 186 NTVGLSNSVLKLIERRHRVDNWIKYAGMILTIVVVFFFVRWVR 228

BLAST of Lsi10G002130 vs. NCBI nr
Match: gi|659082731|ref|XP_008442003.1| (PREDICTED: membrin-11 [Cucumis melo])

HSP 1 Score: 383.6 bits (984), Expect = 4.0e-103
Identity = 204/216 (94.44%), Postives = 210/216 (97.22%), Query Frame = 1

Query: 104 GGGGGTLSEIYQSAKRLLLRTRDGLEKLERLEYTAASGFDSADLSFSIKRDITQIQSLCV 163
           GGGGGTLSEIYQSA+R LLRTRDGLEKLERLEYTAASG DS +LSFSIK+DITQIQSLCV
Sbjct: 6   GGGGGTLSEIYQSARRQLLRTRDGLEKLERLEYTAASGMDSPELSFSIKKDITQIQSLCV 65

Query: 164 EMDRLWRSVAAKSQRDLWKRKVEQVAEEADSMKQSLDKYFLRNQKRTMEAKERAELLGRA 223
           EMDRLWRS+AAKSQRDLWKRKVEQVAEEADSMKQSLDKYFLRNQKR MEAKERAELLGRA
Sbjct: 66  EMDRLWRSIAAKSQRDLWKRKVEQVAEEADSMKQSLDKYFLRNQKRMMEAKERAELLGRA 125

Query: 224 SGDSAHILRIFDDEAQAMYSVRNSSRMLEEASATGEAILFKYSEQRDRLKRAQRKALDVL 283
           SGDSAHILRIFDDEAQAM SVRNSSRMLEEASATGEAILFKYSEQRDRLKRAQRKALDVL
Sbjct: 126 SGDSAHILRIFDDEAQAMNSVRNSSRMLEEASATGEAILFKYSEQRDRLKRAQRKALDVL 185

Query: 284 NTVGLSSYVLKLIERRHRVDNWIKYAGMILTIVIVF 320
           NTVGLS+ VLKLIERRHRVDNWIKYAGMILTIV+VF
Sbjct: 186 NTVGLSNSVLKLIERRHRVDNWIKYAGMILTIVVVF 221

BLAST of Lsi10G002130 vs. NCBI nr
Match: gi|1009114041|ref|XP_015873470.1| (PREDICTED: membrin-11-like [Ziziphus jujuba])

HSP 1 Score: 347.1 bits (889), Expect = 4.2e-92
Identity = 177/221 (80.09%), Postives = 202/221 (91.40%), Query Frame = 1

Query: 106 GGGTLSEIYQSAKRLLLRTRDGLEKLERLEYTAASGFDSADLSFSIKRDITQIQSLCVEM 165
           GGGTLSEI+QSAK+LL+R+R GLE+LE LEY  ++  DS +LS+S+KRDI QIQSLCVEM
Sbjct: 6   GGGTLSEIHQSAKKLLMRSRGGLERLESLEYMTSTAVDSPELSYSVKRDIAQIQSLCVEM 65

Query: 166 DRLWRSVAAKSQRDLWKRKVEQVAEEADSMKQSLDKYFLRNQKRTMEAKERAELLGRASG 225
           DRLWRSVA KS+RDLWKRKVEQ+ EEA+S+KQSLDKYF+RNQ+R  EAKERAELLGRA+G
Sbjct: 66  DRLWRSVANKSERDLWKRKVEQIVEEAESLKQSLDKYFVRNQRRVTEAKERAELLGRANG 125

Query: 226 DSAHILRIFDDEAQAMYSVRNSSRMLEEASATGEAILFKYSEQRDRLKRAQRKALDVLNT 285
           +SAH+LRIFD+EAQAM SVRNSSR+LEEASATGEAILFKYSEQR+RLKRAQRKALDVLNT
Sbjct: 126 ESAHVLRIFDEEAQAMQSVRNSSRLLEEASATGEAILFKYSEQRERLKRAQRKALDVLNT 185

Query: 286 VGLSSYVLKLIERRHRVDNWIKYAGMILTIVIVFVFVRWVR 327
           VGLS+ VLKLIERRHRVD WIKYAGM LT+ +VFVF RW R
Sbjct: 186 VGLSNSVLKLIERRHRVDKWIKYAGMALTLFVVFVFWRWTR 226

BLAST of Lsi10G002130 vs. NCBI nr
Match: gi|702246417|ref|XP_010054848.1| (PREDICTED: membrin-11-like [Eucalyptus grandis])

HSP 1 Score: 337.4 bits (864), Expect = 3.3e-89
Identity = 180/235 (76.60%), Postives = 204/235 (86.81%), Query Frame = 1

Query: 104 GGGGGTLSEIYQSAKRLLLRTRDGLEKLERLEYTAAS------------GFDSADLSFSI 163
           GGGGGTLS++YQSAKR LLRTRDG+E+LERLE +++S            G +S +LS SI
Sbjct: 11  GGGGGTLSDLYQSAKRALLRTRDGMERLERLECSSSSSSSGGGGGGGGGGLESQELSSSI 70

Query: 164 KRDITQIQSLCVEMDRLWRSVAAKSQRDLWKRKVEQVAEEADSMKQSLDKYFLRNQKRTM 223
           KRDI QIQSLCVEMDRLWRS+AAKSQRDLWKRKVEQVAEE +S+K+SLDK+FL+NQKR M
Sbjct: 71  KRDIAQIQSLCVEMDRLWRSIAAKSQRDLWKRKVEQVAEETESLKESLDKHFLKNQKRMM 130

Query: 224 EAKERAELLGRASGDSAHILRIFDDEAQAMYSVRNSSRMLEEASATGEAILFKYSEQRDR 283
           EAKERAELLGRA+GDSAH+LRIFDDEAQAM S RNS+RMLEE+ ATG AIL KYS+QRDR
Sbjct: 131 EAKERAELLGRANGDSAHVLRIFDDEAQAMQSARNSARMLEESYATGVAILSKYSDQRDR 190

Query: 284 LKRAQRKALDVLNTVGLSSYVLKLIERRHRVDNWIKYAGMILTIVIVFVFVRWVR 327
           LK+AQRKALDVLNTVGLS+ VLKLIE+RHR D WIKYAGMILTIVI+F F RW R
Sbjct: 191 LKKAQRKALDVLNTVGLSNSVLKLIEKRHRGDRWIKYAGMILTIVILFAFWRWTR 245

BLAST of Lsi10G002130 vs. NCBI nr
Match: gi|641847206|gb|KDO66087.1| (hypothetical protein CISIN_1g027099mg [Citrus sinensis])

HSP 1 Score: 332.8 bits (852), Expect = 8.1e-88
Identity = 171/222 (77.03%), Postives = 202/222 (90.99%), Query Frame = 1

Query: 106 GGGTLSEIYQSAKRLLLRTRDGLEKLERLEY-TAASGFDSADLSFSIKRDITQIQSLCVE 165
           GGGTLSEIYQSAK+LLLR RDG+EKLERLE  T+  G+DS +LSF++K+DI+QIQSLCVE
Sbjct: 7   GGGTLSEIYQSAKKLLLRARDGVEKLERLESSTSTGGYDSPELSFAVKKDISQIQSLCVE 66

Query: 166 MDRLWRSVAAKSQRDLWKRKVEQVAEEADSMKQSLDKYFLRNQKRTMEAKERAELLGRAS 225
           MDRLWRS+AAKSQRDLWKRKVEQVAEEA+S+K+SLDKYFLRNQ+R  EA+ERAELLGRA+
Sbjct: 67  MDRLWRSIAAKSQRDLWKRKVEQVAEEAESLKESLDKYFLRNQRRINEARERAELLGRAN 126

Query: 226 GDSAHILRIFDDEAQAMYSVRNSSRMLEEASATGEAILFKYSEQRDRLKRAQRKALDVLN 285
           G+S+HILRIFD+EAQAM SVRNSSRML+E+ ATG AIL KY+EQR+ LK+AQRKALDVLN
Sbjct: 127 GESSHILRIFDEEAQAMQSVRNSSRMLQESFATGTAILAKYAEQREHLKKAQRKALDVLN 186

Query: 286 TVGLSSYVLKLIERRHRVDNWIKYAGMILTIVIVFVFVRWVR 327
           TVGLS+ VL+LIERR+RVD WIKY GM+ T+VI++ F RW R
Sbjct: 187 TVGLSNSVLRLIERRNRVDTWIKYVGMVSTVVILYFFWRWTR 228

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
MEM11_ARATH1.5e-7867.42Membrin-11 OS=Arabidopsis thaliana GN=MEMB11 PE=1 SV=1[more]
MEM12_ARATH2.3e-7465.77Membrin-12 OS=Arabidopsis thaliana GN=MEMB12 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0KWL2_CUCSA7.1e-10794.17Uncharacterized protein OS=Cucumis sativus GN=Csa_4G188920 PE=4 SV=1[more]
A0A067FRK5_CITSI5.7e-8877.03Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027099mg PE=4 SV=1[more]
V4T8X2_9ROSI2.8e-8776.58Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022078mg PE=4 SV=1[more]
A0A061F7M2_THECC3.1e-8673.99Membrin, putative OS=Theobroma cacao GN=TCM_025855 PE=4 SV=1[more]
A0A059A1U9_EUCGR1.2e-8574.89Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K01520 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G36900.18.6e-8067.42 membrin 11[more]
AT5G50440.11.3e-7565.77 membrin 12[more]
Match NameE-valueIdentityDescription
gi|449462766|ref|XP_004149111.1|1.0e-10694.17PREDICTED: membrin-11 [Cucumis sativus][more]
gi|659082731|ref|XP_008442003.1|4.0e-10394.44PREDICTED: membrin-11 [Cucumis melo][more]
gi|1009114041|ref|XP_015873470.1|4.2e-9280.09PREDICTED: membrin-11-like [Ziziphus jujuba][more]
gi|702246417|ref|XP_010054848.1|3.3e-8976.60PREDICTED: membrin-11-like [Eucalyptus grandis][more]
gi|641847206|gb|KDO66087.1|8.1e-8877.03hypothetical protein CISIN_1g027099mg [Citrus sinensis][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006888 ER to Golgi vesicle-mediated transport
biological_process GO:0006896 Golgi to vacuole transport
biological_process GO:0006891 intra-Golgi vesicle-mediated transport
biological_process GO:0006623 protein targeting to vacuole
biological_process GO:0042147 retrograde transport, endosome to Golgi
biological_process GO:0048280 vesicle fusion with Golgi apparatus
cellular_component GO:0005829 cytosol
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0012507 ER to Golgi transport vesicle membrane
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0031902 late endosome membrane
cellular_component GO:0031201 SNARE complex
molecular_function GO:0005484 SNAP receptor activity
molecular_function GO:0000149 SNARE binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi10G002130.1Lsi10G002130.1mRNA


Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:1.20.5.110coord: 242..298
score: 5.
NoneNo IPR availablePANTHERPTHR21230VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATEDcoord: 105..342
score: 7.3
NoneNo IPR availablePANTHERPTHR21230:SF1GOLGI SNAP RECEPTOR COMPLEX MEMBER 2coord: 105..342
score: 7.3
NoneNo IPR availablePFAMPF12352V-SNARE_Ccoord: 237..299
score: 3.9

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi10G002130Cla006793Watermelon (97103) v1lsiwmB068
Lsi10G002130ClCG02G007830Watermelon (Charleston Gray)lsiwcgB055
Lsi10G002130Cla97C02G034480Watermelon (97103) v2lsiwmbB054
Lsi10G002130Bhi10G001227Wax gourdlsiwgoB069
The following gene(s) are paralogous to this gene:

None