Lsi10G001930 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi10G001930
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionZinc finger with UFM1-specific peptidase domain protein, putative
Locationchr10 : 3208304 .. 3215754 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTAAAATGAGTGTTTTATGCCATTATTTCAAAAAAATAGAAGTAGAAAGAAGGGGGTGAGTAAAAAATTAATTCATTTAGTTCGTAGTTTTATCCAAAACCGAACTGATCCGAACCGTGCACCCTTAATTTTCACTGTTATATCATCTATCCACTTACGGAGTTCCCAAATTTTAGAAATACAATCTGGCTGGCTATCGCTCAAAGGTCATAATATAATTTCTGGAGAAAGCAGGTCATTAGATTGTATTCCTGAGATTCAATGAATTCATCGAGTTGCCCCTTCTGCGACCAAGTTGTTCCATCAGAAGAACTTCAGCGGTACCATTCTTTCCGCTTCTCTTTCAATTCCAATCACTTGCTTTGCTCTCTGGTTATGTAAACCGAATCTTTAGATCCTCATATTAAAATTTCTCACCTTTGACTCCAAAACTTCTGTAACTAAGGTTTACTTAACGACTGAGGAAGATCTCTTTATGTTATTGCCATTGCAGGCATGCCAATGGTCACTTTGAGGATGAAGACAATGACTATAAACAACGCCAACTTGCTATGGACTTTGAGTTGGCCCAACAAATGGCTTTTTCCTCTACTTCTTATGACAATGTAAGTAAGTTGTTCCATCTTTTTAATCCCAAGGCCTTGATTCTAGTTTTGATTCTTCGTTATACAATCCATACGGCTTCAATGTTGGTAATTTGGTCCTTTTATAATTCATGTTTTTAGGATAATAACAAAAACGGGGACATGCCACAAGAGATTAAGTTTGAGGGATCTTTGAGTAGCAGCAAGTTGAGTTGTGAGAGGGGGACTTTGGTGATGGGGGAGTTGAATGTTAATGAAAAGATATCTCGCTTGATTGGTTCACAGAATAGGGGTGCCTTTTGTAAGGTGGAAGGTGGTCTGATGTCTTTATTAAGAAACTGCTTAGAATTAGAATCTCATGACTCGACTAGTATTTTGTCAGGGTATGTTGATCATTATCAGAGTATTGAGTTTGAGGATTCTGGGTGGGGCTGTGGATGGCGGAACATTCAAATGCTCTGCTCTCATTTGCTAATGCAAAGACCAGAAACGAGAAATGTTTTATTTGGTGGATCAGGAGTTGTTCCAGATATTCCATCACTTCAGAGATGGCTTGAGATTGCTTGGGAAAGAGGATTTGATGTGCATGGTGCAGAACATTTTAATTACAAAATTTATGGTAGAAAAAATTGGATTGGAACCACTGAATGTGCTGCCCTTTTGCGTTCCTTTGGGCTTCAGGCAAGGATAGTTGATTTTGGTCCTAAAGAGTGCGAGGAACTTTATCTCTCAGCCCCTGGTTCAAGTAGTGGGGCACACATGGTAAACATAATTGATGCAAATAAGAGAAAGACAGTTAAGGTTTATGGGCCCATGGATAGGTATCTTGACCGTGTAAATGATAAGGTTCCACAAACTGGTTCTAGTGGGCATGAAAATTCTGAATATTTTAAAATCTCCCAAAATATCAAGAAGAATAAGTCCCCTCAAAAAGCAAAGTGTCATCAGGTTCTGGTTGATTGGGTATGGAATTACTTCTCTGATGGAAGGATATGTTCGTATAGTCACCAGCATGTTAATATTAGTGAAAAAACGTACGTCTTTAATTGACATTTAGTCTATCTTTTTTCTGTTTATTCTAACATCCATTTGTGTATGTATGTATGATGTGTTTGCCATCAGAATAATTATACATTGTTTTGCTTGAGAGAAATTTTGGAAGGACTCTTAGGATATCATCATCTCAATGGTTTAGGTTGGGGTCTTCTTTCCGAGTAATTTTGTAGTTTTGTAATTATTCTATTTTAACCCATTGGAGAGTTTTTTTCTAGTCTTCTTTGATTTCTTTTGGTGGATTCGTGTGTACCCTCCTTGTATTCTTTGGATATTAATGAAGTACGGAACTTTTAGTTTTTGTCTTTTCATATAAAAAGGTTACATTACGAATATATTGATTATCATGAGAATGTGGAAGTTCTCACGACATGTTTCAATTTTCAAATGATTCCATTGATTTTATTCACAAAGTTTCTTTTCTTTAATACAAGGAAAAATGTGCCATCATTATCATTAACTTCATAAGATCGTTTCAACCAGGCCATTGTTCTTTCAGCATGATGGACATTCTAGGACCATCGTGGGGATTCAAGTTAAACAGCAGTGTAATGGAATGCAGCAATACAATCTCCTGATTTTGGACCCTGCTCACGTAATTTTCTTCCCCTGCAATTTTATTTGTGAGCCCTATCTTTGCAGCTGTTAGTTTCCTTTGTTGTCCAATTTTGAACTGGAAAAAAATATATTTTTTTGTTGCTTCAACATTATCAACTCGGTATTCAGCACAAAGGTCCGTTCTTCCCAATACTCTTAGTGGAGTAATTACTATATTTTAGTTCGCATACATTTTTCTCAATGTGTTTGTGCGAGACTGTCAATGGTAAATAAGTATGTCAGGAGGGGCAGAAGGGAAATTCACCACCCAACCCTTAGTAGCCATTAGTTTGTGTTAGTATATATGTGAGTCATCTTTGTACTTTTGGGATTATCTTGTAATTTGTGTGTATTCTGTGGTTAGTACATCACTGCAAGGAAGATCCTACCTCAATGCAAGGAAGATCCTACCGTCTCGAGATGGTGGAAATGCTTGTGTAATCGCTATCTTGTGTTAATGTGATATTGTGGAAGTGGAATCCTCACAGTTTGTTCATCTTGAAGTTCGCTTAAATATTACTACACTTACTGACTAGGTGGTTTGAGTATGGGTGTTTGGAAGTTCTTTACATTGATTTACTTAATAAAAGTTACAGTTTCTTATACATAAATGTATTTATTAAAGAAAAGCGACTCTTCTTCCTCTTCTTTCTCGCAGTTGGCAATTTCAGTTGATTAATTATTGTAGAAATTGTTTTCTTGTTTTCATGTTGCATTCTAGTGATCTCATGACGTATTATGTAGAGTACTAGAGGCCTTGAAAGGGCTCTTAGAGAGAATATTGGATGGCAGAAACTAATAAAAAGAGGAATTCACACGCTAAATAAGCCACAATACCAGGTTTTCCTTTACTATAAACTTATAAGTTAAAATTTTTGGTTATCGGATGGAGACTATGTAATTAATATATCTTTTTCCAGTTGTGTTATATTGATTCTGGAATTGCTGCTGGCGGTGACATGGAATTGCTCAAGACAATCGATAGCATCTTTCTGGAGCTTTAAATGAGTATCTTGTAGCTTCTTTGTTCTCTAAGACACAAGTCATTGACGTGTATTTAAACTAAAAAACCTTTCATTTGTAACAACCTATAATCAGATCACTCACCTGATAATAGAAAGCAAGTTCTTTAACGAATTAACTATTATAGTTGTCTTCTATATAAGCATATTGGACTTATATCCTACCTGTAATGATTTAAAATATCAAACATCAGCAAGACTCTGTATCCTGAAGAGTTTTGAGTACACTCCATCTGGAGCTGTCAATAGGGTGGTATGCGAGCCTATCTCCACAATCTCACCTCTATCCATGACTACAATAACATCTGAGTTTGTCACTGTAGAGAGTCGATGGGCAACTGTAATCTGGGTAGTTCTGAAGCCATTGTTGACATTTATAGACTCTAATGCACTAACTAAAGTTCTTTCAGATTCAACATCTAATGCACTCGTTGGTTCATCAAGGAGCAAAATTGCTGGCTTCTTCAAAAGAGTTCTAGCAATGGCTATTCTTTGCTTTTGTCCTCCTGACAGTTGGCAACCTTTTTCTCCAACAAGTGTATCATATCCATCAGGCAAAGTACTGATAAATTCATGTACTTTAGCTTCTCTTGACACCTTTAAAAGTTCAGTTTCAGAGACTTGCTCAATCCCATAACAAATATTATATCTGATCGAGGAGCTAAAAAGAACAGGCTCTTGTTGCACAAACCCTATATGTGTCCTCAATTTTCTCAGATTGTATTCTTTTATATCCTTTCCATCAATAAGGATATTGCCTTCTTCAGGATCATAGAATCTGAGGAGAAGTGCCAAAACAGAGGACTTTCCTGCACCACTTGGTCCAATAAGAGCCACCCTTGATCCTGCTTTGATTTGTAAGCTAAAGTTGGTAAGAACAATGACTTCTGGCCTTGATGGATAGTTAAATTTTACCCTTTGAAATTCAATTCTCCCTTCAATTTTCTCAGTTTTTGGACTTTTTGGTATTTCTGGTTCAATAAGAGTTTTCCGGTCAAGTGTGTGGAATGCTGGAGTTAGTATGCCAATGGCTGAGATGACAGTTGGAATTAATGTCCACAGTTCAGTGATTGAGGGTACTGTGAGGGAGAAAATCTGGTATGATCTTATGCCATCTTCGAAGGATGCTTGTCTTTTGTGAACCAAAATTGCTGTGTACCACAAAGCAATGGCATGGGCAATGTTCCACAAGCAAAGCGAGATGCCATTAATGATTCCATACTTGATGCTTTCTCTCTTGCTTTTTCTCTTTGGTTCTTCTAATGACATTCTTGCTCTCTTCATTATTTGTTCTTCTTGGCAAAAAGATGCAATAGTTCTTATGTTGGTTGCTGACTCGGAGGCTAGTGAAACTAGTTCGTGATGAGCAGCAGCAGAATCTCTTGAAAATCCTTTGGCAGACTTGGCTTGTATTAGGCCACCAATGAAGTGGAAAGGCATGACAGCCCACGCAACAAGTGCCATTCTCCAATTGACAATCAAGCTGACAGTGGTGGCAATTAGAATGGAGGAGATGCATTGTACAATGACAGACATTCGATCAGCTATTATGGTTTTTATCAGGGAGGTGGTGCTCATTATTTGTGATGTAAGTGAACCAACATTGTTTTCAGATCTGTCAAACCATGCTACTTCATTGCGTAGTACAACTGAAATAATCCATCGGAAGAATTATATTAGTCTAGTTAACGTTAGAGGCTACTTTTGGGTTCATAGTATGCTCTTAAACTTTTTATGTAAACAAAGAAATGTGTTCTTAAATTATACCTGAATAGAGAGCTTCTCTGAGGTTTTTCATTGCTTTTTCTCCCACTATTCCGAAGAAATAGTGTTGCATGGTGTGAGTAAAAAATGATAGTAATCCCACCATAGAGAAGATGAGAGAGTATAATCCAACTTTATGCTTCGCGTTTGTGTGATAGTAGGCTACCCCTATTGTTATGATAAAGAATCCAAAAATAGGCTTTGAGATGCCAGACAAAGCTGCTGCAAAAGATCCAAAAATAGTCTTCATTATCTCTATATTACTCAAGCCAAACCAAATTCTGAAGAATATTTCTTTTGATCCTTCCTTCTCTTCTTCTCTCAGAGAATCTATTTTGGAACTCTTGGGCTCAAGTTTTTCGTCTTGATCAAGGTCGCAAGATGAAGCTTGTTGATGGGCACTCCCCGGTTCTGACAATGAGTTTGAATTGCTGTCCATTAATAAACAATTCATACCAGTTAGTCATGTTTTCTTTTGAAGAAATTGTGGTTTATGTAGTATGAAGAACAAACCTTGAATCTTGAATTGGTCTGATATTATGCATGCTGAATAAGTTGCTATAGAATATACTTGTTTCTAGCAAGCTTTGGTGTGTTCCTGTTTCTAAAACTTTTCCAGTTTCTATGATGGCAATCATATCTGCACCAATAATAGTCGACATTCTGTGGGCAATCATAATGACTGTCCTCCCAACGATAGCCTTTTCAAGAGCGTCCTGAACCAGCCTCTCAGATTCTGAATCTAAAGCACTTGTGGCTTCATCCAGTAAGAGAATTCGTGGATTCTTGAGAATGGCTCTTGCTATTGCTATTCTTTGCTTTTGACCTCCTGACAATTGAGTTCCCCCTTGTCCAACCTGAAAATTTCACCCACATATTATTGATTTTGGAAAAAGCATGTATTTTAAAGGTGCTCCTAACTGGTCCAGACATCTCTAACATGTTAATAATTTTTTTTTTCTGTTTTTTTTGCAAACTTAAGCTAAATAAGTTTCAATCTCTTATGGCAGAATATCCTCAGTCACCTTGAATTATTAAAATCAGGTGAAACTTTGAATTCTGGCAGGAAATGGCATTGACAGAAGAGGAAAATTTGGACTCTCATAGCTTTACCTCTGTTAAGTACTTGTTTGGAAGGTCAGATATAAAAGAGTGTGCATTCGCCATCACTGCTGCATTTTCTATTTGTTGATCATTTGCATCTAGTTTTCCCATTTTGATATTATCCTTGATGGTTCCAGCAAAAAGTGCAGGTTCCTGAGAAACTATTCCAATATTATTCCTGAGGAATTTCAGATTCAGATCCTTGATGTTCTGATGATCTATGAACACGTCTCCTGAAGAAAAGTCAGTTTTAAGATTGTCATGAAGATGAAAAAAGAAGTGAGAGAGAGGATGAAAAGGCAAAGGGCTTGTGGGAGCATACCCTGAAGAGGGTCATAGAATCTAGTGACAAGGGAGATGACTGTACTCTTTCCACACCCGCTGCTACCGACTAAGGCAACGGTTTGCCCTGCTGGAATGGACAAAGAGAAGCCTTGAAGGATTAGTTTATGAGGACGAGACGGGTAAGCAAAGTGGACTTCTTGAATATTGATGTGGCCTTCAATATGCTCCAACGTCCTCTCTTTTGAACCGTCAATTGCAGAGGGCTTCCTTTGAATCACTTGGAAAACTTCCTTCCCTGCAGCCTTTGCTTGGTTGAATATTTGTAAGTCTGGTGCAGCGTAAGTCAGTGAGCTGCAACCCACCAAAAAAGGAGAGATTTTTTACTTAATATTCTACACCTTTGGTTCATTTTGGATTACATATGTTTTATAAGTTGAGTTAAATCACCGGTTGCTCTAAAGTGCTTAAGTTGATGGATGAAGGTAAATTTTATATTATATCATTTAATCACTTTCTCTCACATGTGGGCTTGAAATATGTAAAAGATCCAACAAGTGGAAATCAATATTAGTTGGAGAGGAAGTAACATTGCAGGAGTTTGAATATAAGACCTCTCGAATCACTTGCTCTGATACCATGTTAAATCACTGATGGACTTAAAAGCTTAAGCTGATGGGTGAAGGTAACATCAGGTAAATTTAATATTATATCATCTAATAGTTGATATTGTTTTTGACTTACATTGCTCCAAAGAGAATGCTCATAACGGCGGCTATGATGTCTCCTCCACTGGCCCTTCCTGCAGTTACAACAACAGCTCCAATCCATACAATGAGACTCCAACAACCGAAAGTTACAGTTTGAAACATTCCTATGCCCACTCCCTTCACCAATGCTTCTTGCTTGCTCATCACAATCAATTTCTCGCATTGCTCTGCAAATGCCTTTATGCTGCTCCTCTCTCCCACAAATGCATACACTGCTCTGATTTGAGATATTGACTGCCCCATACATATCAGTTAACATTTTTGTTCTATACAC

mRNA sequence

TGTAAAATGAGTGTTTTATGCCATTATTTCAAAAAAATAGAAGTAGAAAGAAGGGGGTGAGTAAAAAATTAATTCATTTAGTTCGTAGTTTTATCCAAAACCGAACTGATCCGAACCGTGCACCCTTAATTTTCACTGTTATATCATCTATCCACTTACGGAGTTCCCAAATTTTAGAAATACAATCTGGCTGGCTATCGCTCAAAGGTCATAATATAATTTCTGGAGAAAGCAGGTCATTAGATTGTATTCCTGAGATTCAATGAATTCATCGAGTTGCCCCTTCTGCGACCAAGTTGTTCCATCAGAAGAACTTCAGCGGCATGCCAATGGTCACTTTGAGGATGAAGACAATGACTATAAACAACGCCAACTTGCTATGGACTTTGAGTTGGCCCAACAAATGGCTTTTTCCTCTACTTCTTATGACAATGTAAGTAAGTTGTTCCATCTTTTTAATCCCAAGGCCTTGATTCTAGTTTTGATTCTTCGTTATACAATCCATACGGCTTCAATGTTGGTAATTTGGTCCTTTTATAATTCATGTTTTTAGGATAATAACAAAAACGGGGACATGCCACAAGAGATTAAGTTTGAGGGATCTTTGAGTAGCAGCAAGTTGAGTTGTGAGAGGGGGACTTTGGTGATGGGGGAGTTGAATGTTAATGAAAAGATATCTCGCTTGATTGGTTCACAGAATAGGGGTGCCTTTTGTAAGGTGGAAGGTGGTCTGATGTCTTTATTAAGAAACTGCTTAGAATTAGAATCTCATGACTCGACTAGTATTTTGTCAGGGTATGTTGATCATTATCAGAGTATTGAGTTTGAGGATTCTGGGTGGGGCTGTGGATGGCGGAACATTCAAATGCTCTGCTCTCATTTGCTAATGCAAAGACCAGAAACGAGAAATGTTTTATTTGGTGGATCAGGAGTTGTTCCAGATATTCCATCACTTCAGAGATGGCTTGAGATTGCTTGGGAAAGAGGATTTGATGTGCATGGTGCAGAACATTTTAATTACAAAATTTATGGTAGAAAAAATTGGATTGGAACCACTGAATGTGCTGCCCTTTTGCGTTCCTTTGGGCTTCAGGCAAGGATAGTTGATTTTGGTCCTAAAGAGTGCGAGGAACTTTATCTCTCAGCCCCTGGTTCAAGTAGTGGGGCACACATGGTAAACATAATTGATGCAAATAAGAGAAAGACAGTTAAGGTTTATGGGCCCATGGATAGGTATCTTGACCGTGTAAATGATAAGGTTCCACAAACTGGTTCTAGTGGGCATGAAAATTCTGAATATTTTAAAATCTCCCAAAATATCAAGAAGAATAAGTCCCCTCAAAAAGCAAAGTGTCATCAGGTTCTGGTTGATTGGGTATGGAATTACTTCTCTGATGGAAGGATATGTTCGTATAGTCACCAGCATGTTAATATTAGTGAAAAAACGCCATTGTTCTTTCAGCATGATGGACATTCTAGGACCATCGTGGGGATTCAAGTTAAACAGCAGTGTAATGGAATGCAGCAATACAATCTCCTGATTTTGGACCCTGCTCACAGTACTAGAGGCCTTGAAAGGGCTCTTAGAGAGAATATTGGATGGCAGAAACTAATAAAAAGAGGAATTCACACGCTAAATAAGCCACAATACCAGTTGTGTTATATTGATTCTGGAATTGCTGCTGGCGGTGACATGGAATTGCTCAAGACAATCGATAGCATCTTTCTGGAGCTTTAAATGAGTATCTTGTAGCTTCTTTGTTCTCTAAGACACAAGTCATTGACGTGTATTTAAACTAAAAAACCTTTCATTTGTAACAACCTATAATCAGATCACTCACCTGATAATAGAAAGCAAGTTCTTTAACGAATTAACTATTATAGTTGTCTTCTATATAAGCATATTGGACTTATATCCTACCTGTAATGATTTAAAATATCAAACATCAGCAAGACTCTGTATCCTGAAGAGTTTTGAGTACACTCCATCTGGAGCTGTCAATAGGGTGGTATGCGAGCCTATCTCCACAATCTCACCTCTATCCATGACTACAATAACATCTGAGTTTGTCACTGTAGAGAGTCGATGGGCAACTGTAATCTGGGTAGTTCTGAAGCCATTGTTGACATTTATAGACTCTAATGCACTAACTAAAGTTCTTTCAGATTCAACATCTAATGCACTCGTTGGTTCATCAAGGAGCAAAATTGCTGGCTTCTTCAAAAGAGTTCTAGCAATGGCTATTCTTTGCTTTTGTCCTCCTGACAGTTGGCAACCTTTTTCTCCAACAAGTGTATCATATCCATCAGGCAAAGTACTGATAAATTCATGTACTTTAGCTTCTCTTGACACCTTTAAAAGTTCAGTTTCAGAGACTTGCTCAATCCCATAACAAATATTATATCTGATCGAGGAGCTAAAAAGAACAGGCTCTTGTTGCACAAACCCTATATGTGTCCTCAATTTTCTCAGATTGTATTCTTTTATATCCTTTCCATCAATAAGGATATTGCCTTCTTCAGGATCATAGAATCTGAGGAGAAGTGCCAAAACAGAGGACTTTCCTGCACCACTTGGTCCAATAAGAGCCACCCTTGATCCTGCTTTGATTTGTAAGCTAAAGTTGTTTTTGGACTTTTTGGTATTTCTGGTTCAATAAGAGTTTTCCGGTCAAGTGTGTGGAATGCTGGAGTTAGTATGCCAATGGCTGAGATGACAGTTGGAATTAATGTCCACAGTTCAGTGATTGAGGGTACTGTGAGGGAGAAAATCTGGTATGATCTTATGCCATCTTCGAAGGATGCTTGTCTTTTGTGAACCAAAATTGCTGTGTACCACAAAGCAATGGCATGGGCAATGTTCCACAAGCAAAGCGAGATGCCATTAATGATTCCATACTTGATGCTTTCTCTCTTGCTTTTTCTCTTTGGTTCTTCTAATGACATTCTTGCTCTCTTCATTATTTGTTCTTCTTGGCAAAAAGATGCAATAGTTCTTATGTTGGTTGCTGACTCGGAGGCTAGTGAAACTAGTTCGTGATGAGCAGCAGCAGAATCTCTTGAAAATCCTTTGGCAGACTTGGCTTGTATTAGGCCACCAATGAAGTGGAAAGGCATGACAGCCCACGCAACAAGTGCCATTCTCCAATTGACAATCAAGCTGACAGTGGTGGCAATTAGAATGGAGGAGATGCATTGTACAATGACAGACATTCGATCAGCTATTATGGTTTTTATCAGGGAGGTGGTGCTCATTATTTGTGATGAAATGGCATTGACAGAAGAGGAAAATTTGGACTCTCATAGCTTTACCTCTGTTAAGTACTTGTTTGGAAGCAAAAAGTGCAGGTTCCTGAGAAACTATTCCAATATTATTCCTGAGGAATTTCAGATTCAGATCCTTGATGTTCTGATGATCTATGAACACGTCTCCTGAAGAAAAGTCAGTTTTAAGATTGTCATGAAGATGAAAAAAGAAGTGAGAGAGAGGATGAAAAGGCAAAGGGCTTGTGGGAGCATACCCTGAAGAGGGTCATAGAATCTAGTGACAAGGGAGATGACTGTACTCTTTCCACACCCGCTGCTACCGACTAAGGCAACGGTTTGCCCTGCTGGAATGGACAAAGAGAAGCCTTGAAGGATTAGTTTATGAGGACGAGACGGGTAAGCAAAGTGGACTTCTTGAATATTGATGTGGCCTTCAATATGCTCCAACGTCCTCTCTTTTGAACCGTCAATTGCAGAGGGCTTCCTTTGAATCACTTGGAAAACTTCCTTCCCTGCAGCCTTTGCTTGGTTGAATATTTGTAAGTCTGGTGCAGCGTAAGTCAGTGAGCTGCAACCCACCAAAAAAGGAGAGATTTTTTACTTAATATTCTACACCTTTGGTTCATTTTGGATTACATATGTTTTATAAGTTGAGTTAAATCACCGGTTGCTCTAAAGTGCTTAAGTTGATGGATGAAGGTAAATTTTATATTATATCATTTAATCACTTTCTCTCACATGTGGGCTTGAAATATGTAAAAGATCCAACAAGTGGAAATCAATATTAGTTGGAGAGGAAGTAACATTGCAGGAGTTTGAATATAAGACCTCTCGAATCACTTGCTCTGATACCATGTTAAATCACTGATGGACTTAAAAGCTTAAGCTGATGGGTGAAGGTAACATCAGGTAAATTTAATATTATATCATCTAATAGTTGATATTGTTTTTGACTTACATTGCTCCAAAGAGAATGCTCATAACGGCGGCTATGATGTCTCCTCCACTGGCCCTTCCTGCAGTTACAACAACAGCTCCAATCCATACAATGAGACTCCAACAACCGAAAGTTACAGTTTGAAACATTCCTATGCCCACTCCCTTCACCAATGCTTCTTGCTTGCTCATCACAATCAATTTCTCGCATTGCTCTGCAAATGCCTTTATGCTGCTCCTCTCTCCCACAAATGCATACACTGCTCTGATTTGAGATATTGACTGCCCCATACATATCAGTTAACATTTTTGTTCTATACAC

Coding sequence (CDS)

ATGAATTCATCGAGTTGCCCCTTCTGCGACCAAGTTGTTCCATCAGAAGAACTTCAGCGGCATGCCAATGGTCACTTTGAGGATGAAGACAATGACTATAAACAACGCCAACTTGCTATGGACTTTGAGTTGGCCCAACAAATGGCTTTTTCCTCTACTTCTTATGACAATGTAAGTAAGTTGTTCCATCTTTTTAATCCCAAGGCCTTGATTCTAGTTTTGATTCTTCGTTATACAATCCATACGGCTTCAATGTTGGTAATTTGGTCCTTTTATAATTCATGTTTTTAG

Protein sequence

MNSSSCPFCDQVVPSEELQRHANGHFEDEDNDYKQRQLAMDFELAQQMAFSSTSYDNVSKLFHLFNPKALILVLILRYTIHTASMLVIWSFYNSCF
Homology
[Close]
BLAST of Lsi10G001930 vs. TrEMBL
Match: A0A0A0LQP1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G428970 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 2.9e-22
Identity = 53/57 (92.98%), Postives = 56/57 (98.25%), Query Frame = 1 

Query: 1  MNSSSCPFCDQVVPSEELQRHANGHFEDEDNDYKQRQLAMDFELAQQMAFSSTSYDN 58
          M+SSSCPFCDQVVPS+ELQRHANGHFEDE+ND KQRQLAMDFELAQQMAFSSTSYDN
Sbjct: 1  MSSSSCPFCDQVVPSDELQRHANGHFEDEENDNKQRQLAMDFELAQQMAFSSTSYDN 57

[Close]
BLAST of Lsi10G001930 vs. TrEMBL
Match: A0A061G3K1_THECC (Zinc finger with UFM1-specific peptidase domain protein, putative OS=Theobroma cacao GN=TCM_015555 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 1.7e-06
Identity = 32/56 (57.14%), Postives = 36/56 (64.29%), Query Frame = 1 

Query: 1  MNSSSCPFCDQVVPSEELQRHANGHFEDEDNDYKQRQLAMDFELAQQMAFSSTSYD 57
          M SS+CPFC    PS ELQRHAN HFEDED +      A D +LA Q+A SS S D
Sbjct: 1  MESSACPFCHLTFPSLELQRHANSHFEDEDEE------AKDLKLANQIASSSGSVD 50

[Close]
BLAST of Lsi10G001930 vs. NCBI nr
Match: gi|778673676|ref|XP_011650039.1| (PREDICTED: zinc finger with UFM1-specific peptidase domain protein isoform X3 [Cucumis sativus])

HSP 1 Score: 112.5 bits (280), Expect = 4.2e-22
Identity = 53/57 (92.98%), Postives = 56/57 (98.25%), Query Frame = 1 

Query: 1  MNSSSCPFCDQVVPSEELQRHANGHFEDEDNDYKQRQLAMDFELAQQMAFSSTSYDN 58
          M+SSSCPFCDQVVPS+ELQRHANGHFEDE+ND KQRQLAMDFELAQQMAFSSTSYDN
Sbjct: 1  MSSSSCPFCDQVVPSDELQRHANGHFEDEENDNKQRQLAMDFELAQQMAFSSTSYDN 57

[Close]
BLAST of Lsi10G001930 vs. NCBI nr
Match: gi|449468299|ref|XP_004151859.1| (PREDICTED: zinc finger with UFM1-specific peptidase domain protein isoform X1 [Cucumis sativus])

HSP 1 Score: 112.5 bits (280), Expect = 4.2e-22
Identity = 53/57 (92.98%), Postives = 56/57 (98.25%), Query Frame = 1 

Query: 1  MNSSSCPFCDQVVPSEELQRHANGHFEDEDNDYKQRQLAMDFELAQQMAFSSTSYDN 58
          M+SSSCPFCDQVVPS+ELQRHANGHFEDE+ND KQRQLAMDFELAQQMAFSSTSYDN
Sbjct: 1  MSSSSCPFCDQVVPSDELQRHANGHFEDEENDNKQRQLAMDFELAQQMAFSSTSYDN 57

[Close]
BLAST of Lsi10G001930 vs. NCBI nr
Match: gi|659125730|ref|XP_008462832.1| (PREDICTED: zinc finger with UFM1-specific peptidase domain protein isoform X4 [Cucumis melo])

HSP 1 Score: 112.1 bits (279), Expect = 5.5e-22
Identity = 53/57 (92.98%), Postives = 55/57 (96.49%), Query Frame = 1 

Query: 1  MNSSSCPFCDQVVPSEELQRHANGHFEDEDNDYKQRQLAMDFELAQQMAFSSTSYDN 58
          MNSSSCPFCDQVVPS+ELQRHANGHFED DND KQRQLAMDFELAQQ+AFSSTSYDN
Sbjct: 1  MNSSSCPFCDQVVPSDELQRHANGHFEDGDNDNKQRQLAMDFELAQQLAFSSTSYDN 57

[Close]
BLAST of Lsi10G001930 vs. NCBI nr
Match: gi|659125718|ref|XP_008462826.1| (PREDICTED: zinc finger with UFM1-specific peptidase domain protein isoform X1 [Cucumis melo])

HSP 1 Score: 112.1 bits (279), Expect = 5.5e-22
Identity = 53/57 (92.98%), Postives = 55/57 (96.49%), Query Frame = 1 

Query: 1  MNSSSCPFCDQVVPSEELQRHANGHFEDEDNDYKQRQLAMDFELAQQMAFSSTSYDN 58
          MNSSSCPFCDQVVPS+ELQRHANGHFED DND KQRQLAMDFELAQQ+AFSSTSYDN
Sbjct: 1  MNSSSCPFCDQVVPSDELQRHANGHFEDGDNDNKQRQLAMDFELAQQLAFSSTSYDN 57

[Close]
BLAST of Lsi10G001930 vs. NCBI nr
Match: gi|657970230|ref|XP_008376855.1| (PREDICTED: zinc finger with UFM1-specific peptidase domain protein [Malus domestica])

HSP 1 Score: 65.1 bits (157), Expect = 7.7e-08
Identity = 30/54 (55.56%), Postives = 40/54 (74.07%), Query Frame = 1 

Query: 1  MNSSSCPFCDQVVPSEELQRHANGHFEDEDNDYKQRQLAMDFELAQQMAFSSTS 55
          M+ SSCPFCD  V S EL+RHANGHFE+ ++D   +QLA D E AQQ++ + T+
Sbjct: 1  MDYSSCPFCDLTVLSAELERHANGHFEEVEDDELDKQLARDLEFAQQLSLAPTA 54

The following BLAST results are available for this feature:
BLAST of Lsi10G001930 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Lsi10G001930 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LQP1_CUCSA2.9e-2292.98Uncharacterized protein OS=Cucumis sativus GN=Csa_2G428970 PE=4 SV=1[more]
A0A061G3K1_THECC1.7e-0657.14Zinc finger with UFM1-specific peptidase domain protein, putative OS=Theobroma c... [more]
BLAST of Lsi10G001930 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Lsi10G001930 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778673676|ref|XP_011650039.1|4.2e-2292.98PREDICTED: zinc finger with UFM1-specific peptidase domain protein isoform X3 [C... [more]
gi|449468299|ref|XP_004151859.1|4.2e-2292.98PREDICTED: zinc finger with UFM1-specific peptidase domain protein isoform X1 [C... [more]
gi|659125730|ref|XP_008462832.1|5.5e-2292.98PREDICTED: zinc finger with UFM1-specific peptidase domain protein isoform X4 [C... [more]
gi|659125718|ref|XP_008462826.1|5.5e-2292.98PREDICTED: zinc finger with UFM1-specific peptidase domain protein isoform X1 [C... [more]
gi|657970230|ref|XP_008376855.1|7.7e-0855.56PREDICTED: zinc finger with UFM1-specific peptidase domain protein [Malus domest... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi10G001930.1Lsi10G001930.1mRNA