Lsi10G001810 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi10G001810
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionHeavy metal cation transport atpase, putative
Locationchr10 : 2943534 .. 2953694 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAACCCTCTCCTTCCCAATTGCATCTTCAAAACCCCGACTCTTATCAATTACAAACCCAATTGCATTTCCTAACTGTTTTCTTCAAACATCTTCCCCTTCTTCTGCAATTCGCCTTCGTAATTTTTCCATTCTCTATCTACGGCGGAGTGTTCTCTGTTCCGCTGCGGAAACTGGTCGTTCGAATCACGATGACCACCACCATGTTCATGATCACCACCACCACCACCACCACCATGGTCACCACCATTGTGATCATGATGTAGAGCTGTTTGGGCCTCAGAAAGCGATGATTGGATTAGCTAAAGCCATTAGGTGGACGGACTTGGCGAGCTATCTAAAGGAGCACTTGCAATTATGTTGTTGCTCTATGGCTTTGTTTGTGGCTGCTGTTGTTTGCCCATATTTGGTGCCGAATCCCATTGTAAAGCCTTTGCAAAATGCTTTAATTGTCATTGCTTATTCTTTAGTCGGGGTATGGATGTCTTCAACTACCACTTTTTGTTCTGTTTTGATTTGAATTGCTTGAATGAATGTGATTGTTGTAAATTTAATCACGAATCCCTTATAGGTTGAAAATTCTTGAAGTTAATGTGGTTTTTATAATTCTAAACCTAGCACTACTACGACTTGTGAGGGTCTAATGATATGCTCGAATCGATTCCATTCTAACTTGAAAATTCAGTGCTGACATGGTGAGATTTTGTAATCATGAACATCCATTATATAGTTTTTCATTTGGACCTCTCAATTATGTATATTAGAGGAGTTGAGAGGCCGTCGTTAATGTGTTTGATCTATTGTTAGGTGAAGTCTTTTTCTAATTATCCTTTACGTCATGTTTTGCTTGATTGGAGTCCCTTTCTTTGGTGGGACTCCTTTTGTGGGCTTGGTTCCTCAATTCCAAAAGCACCTAGTTCCTTCCTCAATTTCGGCTGCCACACATAAGCGGAAATCTGCCTTATTGATCCATAGATATTCATAGTTCTCTATGTCTGATAATGTTTTTTTATTCAGACCAGTGAAAGAGGGAACTTTGTGCGCAAGGTTTCTACAAATCAAATAGCAAAGGACAGTGGCCGAATATCATCGGAAGTTCAAAGCATTATCCGCGTTTGCCCACTTGTTTGAAGAAGTCTTGGAGGGCATGTTTTCTAATGGGCTTAACCTGGTTGTACAGGCGGAGATGTCCTGTTTCAGGCCTGATGGGCTCAAGGACATGATGTTTGTGGCCTAACTTGTGGAAGATAGCATGAAAGTTTCCAAGCTAGCCCAAGAAGATGGGCCGGGTAAGAAAACCAAACTGGAACCCATAGGTTGTTTGAAATTGGCGGGAAAAACACTAAGGTGATGGTGACACGTACAATTACGCCAGCTGAAAAGATCCCATCAAATCGTAGGGCCTATGTTATAGAGATTAGACCTATAAATGTCTTTTAAATTCTAATTTCCAAGCCCGACGTGATAGGGCCTATCTTATCATAGTGATGAGAGATACTCACCTGGTCACTGTTGCAACAACAAAGAACTAAGATTGCTAGTCTTCTCTAACAAATTTTACGAAGTGGAGATGTAGAGTCTACAAGGTGAGATGGAGAACACGGTGAGTTCCATAGTTGAGTTATCCTTAAATTCAGTGGTGGGGTTGACGACTCCAAGGACTATGAAACTCAAAGGGAGAATAGGGGAGCAAAAGATCTTAATTCTGATTGATTGCAAGGAGACCCATAATTTCATTGCTCAAGGATTAGATGAAAACTTGAAGCTTCTGTTGACCAAAACCATGCAATATGGTGTGGTCGTGGGCTAAGGGGAAGCAATGAAAGGAAAAGTAATATGTAAGGTTGTCACGGTTTCGCTTCGAAAAATGATTGTACAAGAGGATTTCCTTATTTGTATTTAGCTGGGAATGTAATGGTTGAGGAAGCAAGGGGCCATGACAGTTGACTGGAAGTCTTTTAGCATGTCGTTTCGAGTGGGAGACTCACACATTGTTTTAGAAGGAGACTTGGCATTAGCTCATATGGAAATATCCCTAAAGATGTTGTAACAGACCTAGGAAGATGAAGATCAAGGATTCTTAGTGGAGTTTCAAGAGTTGGATTTACAAGGGGTTCGAGAGGGGGGAGATTTGGTGACTGATATGGGAATCTCTGAGTTGGATCATTTGTTTACAAAGTATGTGTTGGGGAAAATGATATATATAAGAACTGAATACACAAGCAAACTGATTACATCTCAACTAAATACAGTATACATGTTGTACACAATAATAATGTTCAAACCGAAAAGTAAGCCAAATAATATAATAAGACTTATGAATTTAAATTGTTAAAGGAAATTAGATTTATTCCCAATTATTAGTTTTCTTTGTAGTATTTTTTCCTTTTCTGTATTTTCCTTTATTAGTTTCTTGGAGTCTATATATTCATTGTATTCTGATTATTCAAAATATATCGAATATATACAAATTATTCATAAATCACAACATGGTATCAGAGCCATAAGTCCTAGGGTTTTACACTTTTCGAACTCTGCCTCCATTGACGGTTGGTCGATGGAGGCAAATCCACGAAATCTCGTCACCGTTACACAGCTCCGACATGTTCATCCATATTTGTCACTGTCTTTGTTATGCTTTTAGATCTATGTTGGTGGATCTCTGTCACTGTTCATGTTCTGTCTTCAGATCTGTGTTTGTGGATCTCTGTCCCATTTTCAATTCGGTTGTTTGTGGGTTCTGTTTCAGATCTCTATGTATGTCTTTGATTCCAGTCCAAAAATTCTTCGTGGGTCTTTGTTTTCGGTCCAAAAATGCTTTGTAGGTATCTATCTCCAACCCAAAAATTGTTTGTGGATCTCTGTTTTTGGCTTAGGAGTCTTTCATAGTCTTTGTTTCCAGCCCAGATCTTTCGTGATTTGTTTCCAGCTCAAAAGTTTTTTCAGTATCTGTCATCTGCCATCTTGTCAGTTAACAAACTCAAGTTGGTCACTTTGAGTTTGAGGGAGGGTGTTAAAGGAAATTAGATTTATTCCCAATTATTAGTTTCCTGTGTAGTATTTTTCCTTTTCTGTATTTTCCTTTATTAGTTTCTTAGAGTCTATATATTCATTGTATTCTGATTATTCAAAATATATCGAATATACACAAATTATTCATAAATCACAACAAAAATAACTAAGAATCTCAAGATATTGTGGAGACGTCAATAGGTAATCATAGCACGCTTTTGATAAGCGTCGTTCTGAAAACAATTATTCACTTTGCACCAGATGCAAGCAAACTACAACGTTCGTCTTAATAAGATGCAACAACTAACTCCGGAAGAACTGCAACCTCGAAATACTCGGATCTGGCAGAACTTTTGGATACTTGCTCTCAACTCAACTCAAGATCAAAATAAAGAAAGAAAGGAAAGAACTCTTCAATTTGAAGTGAGTCACAACGAATGAAACAATAAGTTATTTATAGGCTAGCAACTTAGTAACTCCCCAAAATATAAAATAAAATCAAATAAATACAAAATTGAAACATTTGTCAAATTTAACTCAATTGAGTTGTTACTTGACCAAAATCAAACATGATACATTCAAATTGAAGAAACTACACATTTAACTTTTATACATATTAAATTTATACATGAAACATCATCTTAATTTGATGGTTTCAATTCAATTTGAAGTTTCTAACAATGAATGTAATCTGCATAATTAAATCTATTTTTTATGTTAAAAAAATTTCACAAAAGTTTCACTTTCTTTCACTATAAATATCCAACAGTATGAAGATGTGTTTAATATGCCCGACGAACTTCCACCATCTAGATCCATAGATCACCGTATTCAGTTGAAGGATGGGAAACTTTTATTCTGTGGAAAAGGCAGTCGGATTGTAAAGCAATATGGGAATCTGTCCCTCGCATGCAGCGCCAATTTCCCCATTTCCACCTAAGGACAAGGTGTCTTCTGAAGGAGGGGGTATTTTTAGACTCCTTATTGTGAATGCTTATGTTAGGAGCGGTAAATTGGGAAATGGATGTAGTACTAGCCGTTAGTGGGCTGGTCGGCTTGTGTCTTGTTTTGGGTTAGCCTAGTCGATTAGGGTTTTTTGTTGCAGAAAGTCTATTTGTACGTTCCTGTTTTTCCTTCTGGTGTTATGTTATGTATTTTGAATAGAACTTTGTTCTAAGAGGAGAGGAGATCGGTGCTCTCTAATCGGCTGGCCAGACTATTTTATAACCCTTGCTATCAGAATATTATTTATAAGAATTGATATTAAGACCAAGAGTCTTTACATATACCTCTCGAAAATTTTCCCAAATGCCTTGCCTCCTAGCTTTCCCTGGGTACAAGTTGGTACTTACCTGATTGCATACTTTACGTGATCATAAAAGTGTAACTATATTTGTGTTCTAGTGGCTAAAAGGAAATGAAGAAATATTGATCAGATCAACCTCCCCCCACAAAAAAAGGGGCAAAATATAAAACAGGGTAGGTCTCACTGTACAAGTATTTATTTACGTATAAAATATCCAAGGATAATAGATAGAAAAACATTTATTTTATGCTACAAGAACCCACATATTCATGTTTTGATATTTTCCTTTCACTCTTTAGGAGCAGTGGTCGACCATAGTATGGGAAAAAACCTCCCTTCCTTTTCTGTCTAGAATTTGGAATACTTTCCGGGTAGAGGACTTGTTGCAACTCTGCATGGTACTAAGGTAATAATTCATAATTACAATTCATACAAGTATGTGCTTCTTTTCCATCCATAAATCCAACATCATCTATCATTCCGTCTGTGAGTTATTCTGATGTAAGTCATGCCTTCATAATAAGGTTGTAGAGTCAGATGCATCCAACAAATAAACACGATTAATATTTGATTCTCTCTGTACGCTATCATTTATCTTGTGCTCGTCCTTTTTTCTGTTGAAGTTTGTGACATAATCTATCTTTGCATGATATTATGATTTATCAACTAAAACGCAACAATTCTACAAAGAAACAAAGCATGTATAATAGAAGTATGAAAGCTTCGTTTTCATCCCCAATCGTTTCTCCAAGAATCTTGAATTCATAAGTTATTTTCTTGAATTCATCAAGATTTTCTTATAGAGTTTTGGCAGCATCCATTTTGAATGTAAAAAATCTCTCACGAAGATACATTTTGTTTGGCAGATCCTTGGAGACATACAGAGCATTAAGCTTGGTCCATATCTTGTGAGAGACTTCTTCATCGATGACCTGCCTTAGCACATTATCGCTTAAATTTAGGATCAATGTTCCAAAGGCAGTCGTCTCTAAGGTTTCTTTTTCTTCGTCTGTCATGGTGGCTGGAAGTTCGTCTGGGTCTTGAAGAGCTCTTAAAGCCTTTTGGTGTCCCAGGATGGCTTTGATTTTGGCTTTCCATAAACCAAAATCAGATTTACCATCAAATTTTTCTATGTCAAACCTTGCCACAGCCATTCTTGATTTATGAAAAAAATCAAGAAGTAGTTTCTTGGTTAGTGTATGAATGCTCTAATACCACTGTTACAATTCAACACACTTTACACAACCGAGAAACGAAGGACAAAGAAGAAAGAAAGACTAAAACCAGAAGATGAGATGAAGAGAAGAAGATAACACACTCAAGCTATATTGGTTTGGCTATATAGCCTACATCCACTTTGAAGGGTAACACACTTTATTACTGAAGAGTTCAAGGAATACAAATGAATCACAATGTGATCTGCAAAAGGATTTTTTCAATCCATACTAAAGAAGATATATGCAACTTATATATATAGACAAAAACAGACACGAACTTAAGAGTTGTTGAAGGATTCACACTGTAACGGAAATAACCAATAGTAACTTTATCGTATTGCATAGTCAGTAACTGGCAAGGTGATTTTGCATTCGTCTTGATTTATTATAGTCGGGAATTGAAGGTGAGAAACTATTGAAAGCATCTCTTGGTTCCTTAGATTTCATCACTTCATGCTACAAATCAGAATCCAAATCAAAAGAGATCAAAGAAGTTGTGAACACATCTTCATATAAAAGCGAGTTTGTTCATGATGCTCTTGCAGTTGATGGGAAGGTATGATTTAAATTTTCATAAATGGGCCAGGTTTCTACTTATTCTTTACCTTTCTAGTATGACTAGATATTAATCTAGTGTTGCCTTGTTAGGTTTGCTTTTCTCATCAAATAATGATTACTATATTTAAAACAAGGATAGTTTCTATGACATGGTTTCCGCAATGAGTCTGCATGTTATGATTGATTGCTGTTAGCTGAATATGTTTCTTGAGGTTTAATTTAAGAATAAAATTTTGTTATTTAAACAGTAAGGTGGCTCTGGTGCTATGTGATTTCCTTTTCTTATTTATTTATTTTTTATTTTTTAAAAAAAAAATTTGACTTTCATAGATGAAGATGAAAGAATACATGGGCAAAAATTCATAAGGAGCTAAACTACAAGAAATATCTCTAGTTAAGAGAAATTAGATCAAGCAAGTAATTACAAAAGAGCCTAGAAACATAGGCTTAGAGAGACACGAAGAAGCTAATAAGAGACTGAACATCGCTCCAAGAACTCTCATGTCCTTCAAAGATTTTGTTGTTCCTCTGGCTCCAAAGGCTCTACGCAATAGCACATCTCTTAGCCTCCCACAAAAATCACTCTTTATCTCAAAAAAGCAGACAGAGTATAAACTCCTCAAGCGACTCTTAGAAAATCCAAAAATTGACAAAGTTGAAACCAAATGCCTCAAAGAAAGTGCCCCAAACTACACAAGCAAGATCACAATTCCACAATATATGATGAAGTCCTCAATTGTCCTCTTGCAAAGAATACAACAATGCAATCACCAAAAATCCTCTAGTTGAGATCCGACCCCAGATGTTATCTATTCCGTGCAAAACTTGTCACGCAAAAAACTTGACCTTCCAAACTGAGGAAAAAATTGAATTACCCGTCAAGGAAGGATTAGTAAAACACTAGATGAAAGAGCTACAAGAAAAACCTTTAGGAGGACAAGGACTCAAAAGGCAGGCACCCCTCCTCTCGGGCCTAAAGCAAATAGAGGATAAGAAAGCCAAATGTTAGATGATATAATATTAAATTTGTCTTCACCCATCAGTTTAAGCTTTTTGGTCAATCACTGATTTAAGATGGTATCAGAGCCGATGGTCCAGGGAGGTCCTGTGTTCAAACCGCTACAAATTAATTGCAAAAATAAATTAGGAGGGGGATAGAGAAATTGATACTGTGATTTGCAGTGGTTCGGCACAACCCAACCTACATCCACTTCCCAAACTCTTCTTGGGTATGTCACTCAAACTTGATTCTTTCCACGGTTGAGGATCAAACTATTACACTAACTCTTTTTCCGAGATCAAGAGCAACCTTTACGAAAGTTTGGAAAAATTAAAGAGCACACTTGTCAAACTCTCTAAAAGAGTGGATTTACAAATTTTGAGCTCACAATGAATCAATTCTCACAATACATAAATCACTCTCAATAATTAGATGAAATGAAGAAAATGGAAGCTTAGAGAGAGCAACAATAGAAGCTTTTTGTTTTTGGATAGGATTGAAAATTATAAAGATTGTTGTAGAAATATGGAGAAAAAGATGAGTCTAAAAAGAGAGGGAAGTTGGTGAAATCTAAATTCAATTTGGGCCTTTAGATCTTTGTAAAAGAAAATTGAATGGATGAGATTAAATATAAAAAATAAATATATATTTTTTAAAGTTAACTAGTTGTTAGCAGTGTTTTGAAAGGCGCACCTAGGCGCAAGGCGCAACAATGGCACCTCGCCTCGATAAAGCGAGGCGCACGCCTTACAGCGCCTTCGAAGAAGTGCTGAGGCGCTGCCTCTTCGGGCTCTTTCATCTCTATCCGTCAATTCTTATTCGTGGATGGTTGCGGCGTTCAGCTTTAGGGTTTACTGCTGCCATGTCCAAGTCGGGGAAGAACTCATTAGGGTTGTCAGTGATTACAAAAAAATGGTGAAAAAGTGGACTTACAGAGAAGAAAATCGAAAAGGATGAAGCATAAAGAAGAAGATGAAGGAGGTGGATGGGATGAGAGGCACGAAGAAAGAGAGGAATTTGAAAAGACATGCCTTGATCGGTGGGCTTGTAAAAATAATATTTAAATCGATCTTATTTTTTCTCTCATGTTTACACGTGTCTAAACATGTGTAATGTGAATTTTTAACTCTTTTCAATTCAATTAACATTATTTTTTTTTTTATTCTTTTTTCAAATTTTCTTCTTTGCTGACAGTCATCTTTGTTGCTCCAAAAAATAATTTTGGTACATCCCAAGTTAGTTTGTTTATAACTTTAAACCTGGTTATCTTTTATATATTCTTCCTCAAGTCTTATTTCTTTCCATCAAGGTTTTTGTTCTGTATAGTGTATATATGTATTTATATTTTTTATATATAATGTGCCTCATGAAAAAAGTCTGCGCCTTTTTGTGTGCCTTGCGCCTAGGCTCTAGAGGACCATTGCGCCTTAATTCGTCTTGTGCCTTTCAAAACATTGGCCGTTAGACACAAACATATATAATATTAAATTCATTTACTTTTAAAGTCAATTAGTCGTTAGACACAAACATATATATTAAATTCATTTTCTTTTTAAACTCATTTCCTTTTAAAAATCAATCCAAAAATCAAAACTCCACCCTTTGTCATTTCTCTCATGCTCCCAAGTGCCATCTTTCAATTGGTCCACTTTGATTTAAATTTTTTTTTTTTTTTTTGTCATGTCATCAATTCGGGATTTTTTTTCTAAGCTCGTTTTGGCTATATCTTCTTCATTTGATCTCCGATTTGAGTGATTCAAATTGCATTGGAATCGTTGTTTCTAGCTCTACTCAATGGACTCTTAAAAAAGTACTCAAATTGTTAGTGAATAAAAGCAGGTTTGTTATCATCAAAATATTAATTAATTAATTAATTAAAATAAATTTATTTGAGATTAAGCGCCAAAAAGTCAACAGATATGATATTAAATTAGCCTTCACCCATTAACTTAAGTTTTTTGGTCAATTGTTGATTTAAGACCAAGACATCCGACCCCTATGAAAGGATGATGGAAACCTAGGGAAGGAGGCCAATTGGCCTGATCAAGGATTAAAGCAACTTAGTAGTATTTAATAAAGAACAAATGATATAAGCTAGGGTATAAGGAGCAAAAAAGACTATTCTCCAACCAACTGTGCTCCAAAAATAAGTACCCCACCCATTCCCCACCACATTATGAATAAACTGAGAAAGAAAAGAACTCTGAAGCGATTGCTTTCTACGGGGTCTGGGAGCGACTTTAAACCCCTCACGGACCCCTCTAAGGAATGTTACTAAGAATTATCTTGTGCAATAATGTATCAACTTCATGATAGGTTCACTAGAGCCATTTACCAGCTAGGCTTATGGCCGGTGGGAATATGCTGGGAAATTTTCAACAACAGTAAGCATTACATTGCAGAGTTAATGACTAAGACTGATGAGACAAAATTATAAGTTTATGTATTTATAGACTCTTATAAATACAAGGATGAGAGACACAACTCTTGAAACTTAGGACCAAACTTATAATTTTGTTAAAAAAAATTAATCAAAGTTGTACCTGAAAAGGAACATAGTTGACAATGAATGACAGATAGCTAACATAACATTTTAAAAGAATGCTTTTTTTAGTTGACATTTTATGAATGTAAAATATTCGTCTTTCCCTACCCCATTGGAAAATACAACGTATTCTACCTAAATAGAAGTTCCATCCAATTGGTATTATCAGAATACATTTTTCATATCTCACCTGATTGAAAAGAACCCAACCCTTTCAAATTATCAACCTCCGTTCTTTCCTTCGTGCAACCTTTCTTCTTCATTTATTCAACCAACCATTTTCCTTATAGTTGCAGTTGCAACTCAATCTTCTTTCATCATGTTTTGAAATTTGGTAGCCTCTTGGTTTTTGCACCAATCTTTGGTGCATTGGGGGCAATTTCAATGTGGTGCGCTGGCTGAATGAGAAATCCAGAGGTGTTCCATTCTGTATTGCCAAATCTCGCCAGACTGACTTCTTAGTAATTTTAAGCCAACCACCCTGCTCTCGTAACCTTATGAATTCGTTTGGATTGACTTGA

mRNA sequence

ATGGGAACCCTCTCCTTCCCAATTGCATCTTCAAAACCCCGACTCTTATCAATTACAAACCCAATTGCATTTCCTAACTGTTTTCTTCAAACATCTTCCCCTTCTTCTGCAATTCGCCTTCGTAATTTTTCCATTCTCTATCTACGGCGGAGTGTTCTCTGTTCCGCTGCGGAAACTGGTCGTTCGAATCACGATGACCACCACCATGTTCATGATCACCACCACCACCACCACCACCATGGTCACCACCATTGTGATCATGATGTAGAGCTGTTTGGGCCTCAGAAAGCGATGATTGGATTAGCTAAAGCCATTAGGTGGACGGACTTGGCGAGCTATCTAAAGGAGCACTTGCAATTATGTTGTTGCTCTATGGCTTTGTTTGTGGCTGCTGTTGTTTGCCCATATTTGGTGCCGAATCCCATTGTAAAGCCTTTGCAAAATGCTTTAATTGTCATTGCTTATTCTTTAGTCGGGGTATGGATGTTGAAAATTCTTGAAGTTAATGTGGTTTTTATAATTCTAAACCTAGCACTACTACGACTTGAGCAGTGGTCGACCATAGTATGGGAAAAAACCTCCCTTCCTTTTCTGTCTAGAATTTGGAATACTTTCCGGGTAGAGGACTTGTTGCAACTCTGCATGTCGGGAATTGAAGGTGAGAAACTATTGAAAGCATCTCTTGGTTCCTTAGATTTCATCACTTCATGCTACAAATCAGAATCCAAATCAAAAGAGATCAAAGAAGTTGTGAACACATCTTCATATAAAAGCGAGTTTGTTCATGATGCTCTTGCAGTTGATGGGAAGCCTCTTGGTTTTTGCACCAATCTTTGGTGCATTGGGGGCAATTTCAATGTGGTGCGCTGGCTGAATGAGAAATCCAGAGGTGTTCCATTCTGTATTGCCAAATCTCGCCAGACTGACTTCTTAGTAATTTTAAGCCAACCACCCTGCTCTCGTAACCTTATGAATTCGTTTGGATTGACTTGA

Coding sequence (CDS)

ATGGGAACCCTCTCCTTCCCAATTGCATCTTCAAAACCCCGACTCTTATCAATTACAAACCCAATTGCATTTCCTAACTGTTTTCTTCAAACATCTTCCCCTTCTTCTGCAATTCGCCTTCGTAATTTTTCCATTCTCTATCTACGGCGGAGTGTTCTCTGTTCCGCTGCGGAAACTGGTCGTTCGAATCACGATGACCACCACCATGTTCATGATCACCACCACCACCACCACCACCATGGTCACCACCATTGTGATCATGATGTAGAGCTGTTTGGGCCTCAGAAAGCGATGATTGGATTAGCTAAAGCCATTAGGTGGACGGACTTGGCGAGCTATCTAAAGGAGCACTTGCAATTATGTTGTTGCTCTATGGCTTTGTTTGTGGCTGCTGTTGTTTGCCCATATTTGGTGCCGAATCCCATTGTAAAGCCTTTGCAAAATGCTTTAATTGTCATTGCTTATTCTTTAGTCGGGGTATGGATGTTGAAAATTCTTGAAGTTAATGTGGTTTTTATAATTCTAAACCTAGCACTACTACGACTTGAGCAGTGGTCGACCATAGTATGGGAAAAAACCTCCCTTCCTTTTCTGTCTAGAATTTGGAATACTTTCCGGGTAGAGGACTTGTTGCAACTCTGCATGTCGGGAATTGAAGGTGAGAAACTATTGAAAGCATCTCTTGGTTCCTTAGATTTCATCACTTCATGCTACAAATCAGAATCCAAATCAAAAGAGATCAAAGAAGTTGTGAACACATCTTCATATAAAAGCGAGTTTGTTCATGATGCTCTTGCAGTTGATGGGAAGCCTCTTGGTTTTTGCACCAATCTTTGGTGCATTGGGGGCAATTTCAATGTGGTGCGCTGGCTGAATGAGAAATCCAGAGGTGTTCCATTCTGTATTGCCAAATCTCGCCAGACTGACTTCTTAGTAATTTTAAGCCAACCACCCTGCTCTCGTAACCTTATGAATTCGTTTGGATTGACTTGA

Protein sequence

MGTLSFPIASSKPRLLSITNPIAFPNCFLQTSSPSSAIRLRNFSILYLRRSVLCSAAETGRSNHDDHHHVHDHHHHHHHHGHHHCDHDVELFGPQKAMIGLAKAIRWTDLASYLKEHLQLCCCSMALFVAAVVCPYLVPNPIVKPLQNALIVIAYSLVGVWMLKILEVNVVFIILNLALLRLEQWSTIVWEKTSLPFLSRIWNTFRVEDLLQLCMSGIEGEKLLKASLGSLDFITSCYKSESKSKEIKEVVNTSSYKSEFVHDALAVDGKPLGFCTNLWCIGGNFNVVRWLNEKSRGVPFCIAKSRQTDFLVILSQPPCSRNLMNSFGLT
BLAST of Lsi10G001810 vs. Swiss-Prot
Match: HMA1_ARATH (Probable cadmium/zinc-transporting ATPase HMA1, chloroplastic OS=Arabidopsis thaliana GN=HMA1 PE=2 SV=2)

HSP 1 Score: 99.8 bits (247), Expect = 6.1e-20
Identity = 61/116 (52.59%), Postives = 75/116 (64.66%), Query Frame = 1

Query: 50  RSVLCSAAETGRSNHDDHHH--VHDHHHHHHHHGHHHCDHDVELFG---PQKAMIGLAKA 109
           RS+   A E    +H DHHH    DHH+HHHHH  H C   VEL     PQK + G AKA
Sbjct: 57  RSIRLRAVE---DHHHDHHHDDEQDHHNHHHHHHQHGCC-SVELKAESKPQKMLFGFAKA 116

Query: 110 IRWTDLASYLKEHLQLCCCSMALFVAAVVCPYLVPNPIVKPLQNALIVIAYSLVGV 161
           I W  LA+YL+EHL LCC + A+F+AA VCPYL P P +K LQNA +++ + LVGV
Sbjct: 117 IGWVRLANYLREHLHLCCSAAAMFLAAAVCPYLAPEPYIKSLQNAFMIVGFPLVGV 168

BLAST of Lsi10G001810 vs. TrEMBL
Match: B9SG08_RICCO (Heavy metal cation transport atpase, putative OS=Ricinus communis GN=RCOM_1153850 PE=3 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 4.5e-30
Identity = 84/165 (50.91%), Postives = 109/165 (66.06%), Query Frame = 1

Query: 1   MGTLSFPIASSKPRLLSITNPIAFPNCFLQTSSPSSAIRLRNFSILYLRRSVLCSAAETG 60
           +G   FP  S   + L+IT          + S  S ++  R  S+ +  R+V C+A    
Sbjct: 10  IGVKGFPSVSYSSKQLAITRR--------RRSLDSLSLIFRPISLNFHNRTVRCTAHS-- 69

Query: 61  RSNHDDHHHVHDH-HHHHHHHGHHHCDH---DVE-LFGPQKAMIGLAKAIRWTDLASYLK 120
             NH DHHH H+H HHHHHHH HHH +H   DVE L GPQ+A+I  AKA++W DLA+ L+
Sbjct: 70  -KNHHDHHHHHNHNHHHHHHHHHHHHNHSHGDVEELSGPQRALINFAKAVKWIDLANLLR 129

Query: 121 EHLQLCCCSMALFVAAVVCPYLVPNPIVKPLQNALIVIAYSLVGV 161
           E+LQLCCCS ALFVAA  CPYL+PNP+VKP+QNA I++A+ LVGV
Sbjct: 130 ENLQLCCCSAALFVAAAACPYLIPNPVVKPIQNAFIIVAFPLVGV 163

BLAST of Lsi10G001810 vs. TrEMBL
Match: A0A0R0K0B7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_05G098800 PE=3 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 8.8e-26
Identity = 71/130 (54.62%), Postives = 88/130 (67.69%), Query Frame = 1

Query: 34  PSSAIRLRNFSILYLRRSVLCSAAETGRSNHDDHHHVHDH---HHHHHHHGHHHCDHDVE 93
           P S   L + + L L R  L   AE+  ++H +HHH HDH   HHHHHHH H H  H  +
Sbjct: 45  PISIKPLYSPNFLILHRHRLRCVAESSNNHHHNHHHDHDHGHNHHHHHHHHHSHGIHGAD 104

Query: 94  LFGPQKAMIGLAKAIRWTDLASYLKEHLQLCCCSMALFVAAVVCPYLVPNPIVKPLQNAL 153
           L GPQKA+I  AKA RW DLA  L+EHL LCC S ALFVAA +CP+ +P P++KPLQN+L
Sbjct: 105 LTGPQKAVIAFAKATRWMDLADILREHLHLCCFSTALFVAAAICPHTLPKPLIKPLQNSL 164

Query: 154 IVIAYSLVGV 161
           I +A+ LVGV
Sbjct: 165 IFVAFPLVGV 174

BLAST of Lsi10G001810 vs. TrEMBL
Match: A0A0B2P4P0_GLYSO (Putative cadmium/zinc-transporting ATPase HMA1, chloroplastic OS=Glycine soja GN=glysoja_040451 PE=3 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 8.8e-26
Identity = 71/130 (54.62%), Postives = 88/130 (67.69%), Query Frame = 1

Query: 34  PSSAIRLRNFSILYLRRSVLCSAAETGRSNHDDHHHVHDH---HHHHHHHGHHHCDHDVE 93
           P S   L + + L L R  L   AE+  ++H +HHH HDH   HHHHHHH H H  H  +
Sbjct: 37  PISIKPLYSPNFLILHRHRLRCVAESSNNHHHNHHHDHDHGHNHHHHHHHHHSHGIHGAD 96

Query: 94  LFGPQKAMIGLAKAIRWTDLASYLKEHLQLCCCSMALFVAAVVCPYLVPNPIVKPLQNAL 153
           L GPQKA+I  AKA RW DLA  L+EHL LCC S ALFVAA +CP+ +P P++KPLQN+L
Sbjct: 97  LTGPQKAVIAFAKATRWMDLADILREHLHLCCFSTALFVAAAICPHTLPKPLIKPLQNSL 156

Query: 154 IVIAYSLVGV 161
           I +A+ LVGV
Sbjct: 157 IFVAFPLVGV 166

BLAST of Lsi10G001810 vs. TrEMBL
Match: A0A0B2R5E5_GLYSO (Putative cadmium/zinc-transporting ATPase HMA1, chloroplastic OS=Glycine soja GN=glysoja_028346 PE=3 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 4.4e-25
Identity = 71/120 (59.17%), Postives = 85/120 (70.83%), Query Frame = 1

Query: 42  NFSILYLRRSVLCSAAETGRSNHDDHHHVHDHHH-HHHHHGHHHCDHDVELFGPQKAMIG 101
           NF IL+ R  + C A     S+++ HHH HDHHH HHHHH HHH  H   L GPQKA+I 
Sbjct: 45  NFLILH-RHRLRCVA----ESSNNHHHHDHDHHHGHHHHHHHHHHSHGANLTGPQKAVIA 104

Query: 102 LAKAIRWTDLASYLKEHLQLCCCSMALFVAAVVCPYLVPNPIVKPLQNALIVIAYSLVGV 161
            AKA RW DLA  L+EHL LCC S ALFVAA +CP+ +P P+VKPLQN+LI +A+ LVGV
Sbjct: 105 FAKATRWMDLADILREHLHLCCFSTALFVAAAICPHTLPKPLVKPLQNSLIFVAFPLVGV 159

BLAST of Lsi10G001810 vs. TrEMBL
Match: K7MM17_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_17G166800 PE=3 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 4.4e-25
Identity = 71/120 (59.17%), Postives = 85/120 (70.83%), Query Frame = 1

Query: 42  NFSILYLRRSVLCSAAETGRSNHDDHHHVHDHHH-HHHHHGHHHCDHDVELFGPQKAMIG 101
           NF IL+ R  + C A     S+++ HHH HDHHH HHHHH HHH  H   L GPQKA+I 
Sbjct: 45  NFLILH-RHRLRCVA----ESSNNHHHHDHDHHHGHHHHHHHHHHSHGANLTGPQKAVIA 104

Query: 102 LAKAIRWTDLASYLKEHLQLCCCSMALFVAAVVCPYLVPNPIVKPLQNALIVIAYSLVGV 161
            AKA RW DLA  L+EHL LCC S ALFVAA +CP+ +P P+VKPLQN+LI +A+ LVGV
Sbjct: 105 FAKATRWMDLADILREHLHLCCFSTALFVAAAICPHTLPKPLVKPLQNSLIFVAFPLVGV 159

BLAST of Lsi10G001810 vs. TAIR10
Match: AT4G37270.1 (AT4G37270.1 heavy metal atpase 1)

HSP 1 Score: 99.8 bits (247), Expect = 3.4e-21
Identity = 61/116 (52.59%), Postives = 75/116 (64.66%), Query Frame = 1

Query: 50  RSVLCSAAETGRSNHDDHHH--VHDHHHHHHHHGHHHCDHDVELFG---PQKAMIGLAKA 109
           RS+   A E    +H DHHH    DHH+HHHHH  H C   VEL     PQK + G AKA
Sbjct: 57  RSIRLRAVE---DHHHDHHHDDEQDHHNHHHHHHQHGCC-SVELKAESKPQKMLFGFAKA 116

Query: 110 IRWTDLASYLKEHLQLCCCSMALFVAAVVCPYLVPNPIVKPLQNALIVIAYSLVGV 161
           I W  LA+YL+EHL LCC + A+F+AA VCPYL P P +K LQNA +++ + LVGV
Sbjct: 117 IGWVRLANYLREHLHLCCSAAAMFLAAAVCPYLAPEPYIKSLQNAFMIVGFPLVGV 168

BLAST of Lsi10G001810 vs. NCBI nr
Match: gi|659125760|ref|XP_008462846.1| (PREDICTED: probable cadmium/zinc-transporting ATPase HMA1, chloroplastic [Cucumis melo])

HSP 1 Score: 213.0 bits (541), Expect = 7.9e-52
Identity = 121/168 (72.02%), Postives = 127/168 (75.60%), Query Frame = 1

Query: 1   MGTLSFPIASSKPRLLSITNPIA-FPNCFLQTSSPSSAIRLRNFSILYLRRSVLCSAAET 60
           MGTLSFPI SSK  LLS  NP+  F + FLQ+S  SS    RNF IL LRR VLCSAA  
Sbjct: 1   MGTLSFPIPSSKSHLLSNPNPVPLFRHPFLQSSFSSSPFPSRNFPILRLRRRVLCSAAAA 60

Query: 61  GRSNHDDHHHVHDH-------HHHHHHHGHHHCDHDVELFGPQKAMIGLAKAIRWTDLAS 120
           GRSNHDDHHHVHDH       HHHHHHH  HH DHDVEL GPQKA+IG AKA RWTDLA 
Sbjct: 61  GRSNHDDHHHVHDHNHGHHHHHHHHHHHHRHHGDHDVELSGPQKAVIGFAKATRWTDLAK 120

Query: 121 YLKEHLQLCCCSMALFVAAVVCPYLVPNPIVKPLQNALIVIAYSLVGV 161
           YL+E LQLCCCSMALFVAA VCPYLVP PIVKPLQ A IVI + LVGV
Sbjct: 121 YLRESLQLCCCSMALFVAAAVCPYLVPKPIVKPLQIAFIVIGFPLVGV 168

BLAST of Lsi10G001810 vs. NCBI nr
Match: gi|255567899|ref|XP_002524927.1| (PREDICTED: probable cadmium/zinc-transporting ATPase HMA1, chloroplastic [Ricinus communis])

HSP 1 Score: 140.2 bits (352), Expect = 6.5e-30
Identity = 84/165 (50.91%), Postives = 109/165 (66.06%), Query Frame = 1

Query: 1   MGTLSFPIASSKPRLLSITNPIAFPNCFLQTSSPSSAIRLRNFSILYLRRSVLCSAAETG 60
           +G   FP  S   + L+IT          + S  S ++  R  S+ +  R+V C+A    
Sbjct: 10  IGVKGFPSVSYSSKQLAITRR--------RRSLDSLSLIFRPISLNFHNRTVRCTAHS-- 69

Query: 61  RSNHDDHHHVHDH-HHHHHHHGHHHCDH---DVE-LFGPQKAMIGLAKAIRWTDLASYLK 120
             NH DHHH H+H HHHHHHH HHH +H   DVE L GPQ+A+I  AKA++W DLA+ L+
Sbjct: 70  -KNHHDHHHHHNHNHHHHHHHHHHHHNHSHGDVEELSGPQRALINFAKAVKWIDLANLLR 129

Query: 121 EHLQLCCCSMALFVAAVVCPYLVPNPIVKPLQNALIVIAYSLVGV 161
           E+LQLCCCS ALFVAA  CPYL+PNP+VKP+QNA I++A+ LVGV
Sbjct: 130 ENLQLCCCSAALFVAAAACPYLIPNPVVKPIQNAFIIVAFPLVGV 163

BLAST of Lsi10G001810 vs. NCBI nr
Match: gi|947109663|gb|KRH57989.1| (hypothetical protein GLYMA_05G098800 [Glycine max])

HSP 1 Score: 125.9 bits (315), Expect = 1.3e-25
Identity = 71/130 (54.62%), Postives = 88/130 (67.69%), Query Frame = 1

Query: 34  PSSAIRLRNFSILYLRRSVLCSAAETGRSNHDDHHHVHDH---HHHHHHHGHHHCDHDVE 93
           P S   L + + L L R  L   AE+  ++H +HHH HDH   HHHHHHH H H  H  +
Sbjct: 45  PISIKPLYSPNFLILHRHRLRCVAESSNNHHHNHHHDHDHGHNHHHHHHHHHSHGIHGAD 104

Query: 94  LFGPQKAMIGLAKAIRWTDLASYLKEHLQLCCCSMALFVAAVVCPYLVPNPIVKPLQNAL 153
           L GPQKA+I  AKA RW DLA  L+EHL LCC S ALFVAA +CP+ +P P++KPLQN+L
Sbjct: 105 LTGPQKAVIAFAKATRWMDLADILREHLHLCCFSTALFVAAAICPHTLPKPLIKPLQNSL 164

Query: 154 IVIAYSLVGV 161
           I +A+ LVGV
Sbjct: 165 IFVAFPLVGV 174

BLAST of Lsi10G001810 vs. NCBI nr
Match: gi|734317506|gb|KHN02627.1| (Putative cadmium/zinc-transporting ATPase HMA1, chloroplastic [Glycine soja])

HSP 1 Score: 125.9 bits (315), Expect = 1.3e-25
Identity = 71/130 (54.62%), Postives = 88/130 (67.69%), Query Frame = 1

Query: 34  PSSAIRLRNFSILYLRRSVLCSAAETGRSNHDDHHHVHDH---HHHHHHHGHHHCDHDVE 93
           P S   L + + L L R  L   AE+  ++H +HHH HDH   HHHHHHH H H  H  +
Sbjct: 37  PISIKPLYSPNFLILHRHRLRCVAESSNNHHHNHHHDHDHGHNHHHHHHHHHSHGIHGAD 96

Query: 94  LFGPQKAMIGLAKAIRWTDLASYLKEHLQLCCCSMALFVAAVVCPYLVPNPIVKPLQNAL 153
           L GPQKA+I  AKA RW DLA  L+EHL LCC S ALFVAA +CP+ +P P++KPLQN+L
Sbjct: 97  LTGPQKAVIAFAKATRWMDLADILREHLHLCCFSTALFVAAAICPHTLPKPLIKPLQNSL 156

Query: 154 IVIAYSLVGV 161
           I +A+ LVGV
Sbjct: 157 IFVAFPLVGV 166

BLAST of Lsi10G001810 vs. NCBI nr
Match: gi|356565533|ref|XP_003550994.1| (PREDICTED: probable cadmium/zinc-transporting ATPase HMA1, chloroplastic [Glycine max])

HSP 1 Score: 123.6 bits (309), Expect = 6.3e-25
Identity = 71/120 (59.17%), Postives = 85/120 (70.83%), Query Frame = 1

Query: 42  NFSILYLRRSVLCSAAETGRSNHDDHHHVHDHHH-HHHHHGHHHCDHDVELFGPQKAMIG 101
           NF IL+ R  + C A     S+++ HHH HDHHH HHHHH HHH  H   L GPQKA+I 
Sbjct: 45  NFLILH-RHRLRCVA----ESSNNHHHHDHDHHHGHHHHHHHHHHSHGANLTGPQKAVIA 104

Query: 102 LAKAIRWTDLASYLKEHLQLCCCSMALFVAAVVCPYLVPNPIVKPLQNALIVIAYSLVGV 161
            AKA RW DLA  L+EHL LCC S ALFVAA +CP+ +P P+VKPLQN+LI +A+ LVGV
Sbjct: 105 FAKATRWMDLADILREHLHLCCFSTALFVAAAICPHTLPKPLVKPLQNSLIFVAFPLVGV 159

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
HMA1_ARATH6.1e-2052.59Probable cadmium/zinc-transporting ATPase HMA1, chloroplastic OS=Arabidopsis tha... [more]
Match NameE-valueIdentityDescription
B9SG08_RICCO4.5e-3050.91Heavy metal cation transport atpase, putative OS=Ricinus communis GN=RCOM_115385... [more]
A0A0R0K0B7_SOYBN8.8e-2654.62Uncharacterized protein OS=Glycine max GN=GLYMA_05G098800 PE=3 SV=1[more]
A0A0B2P4P0_GLYSO8.8e-2654.62Putative cadmium/zinc-transporting ATPase HMA1, chloroplastic OS=Glycine soja GN... [more]
A0A0B2R5E5_GLYSO4.4e-2559.17Putative cadmium/zinc-transporting ATPase HMA1, chloroplastic OS=Glycine soja GN... [more]
K7MM17_SOYBN4.4e-2559.17Uncharacterized protein OS=Glycine max GN=GLYMA_17G166800 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT4G37270.13.4e-2152.59 heavy metal atpase 1[more]
Match NameE-valueIdentityDescription
gi|659125760|ref|XP_008462846.1|7.9e-5272.02PREDICTED: probable cadmium/zinc-transporting ATPase HMA1, chloroplastic [Cucumi... [more]
gi|255567899|ref|XP_002524927.1|6.5e-3050.91PREDICTED: probable cadmium/zinc-transporting ATPase HMA1, chloroplastic [Ricinu... [more]
gi|947109663|gb|KRH57989.1|1.3e-2554.62hypothetical protein GLYMA_05G098800 [Glycine max][more]
gi|734317506|gb|KHN02627.1|1.3e-2554.62Putative cadmium/zinc-transporting ATPase HMA1, chloroplastic [Glycine soja][more]
gi|356565533|ref|XP_003550994.1|6.3e-2559.17PREDICTED: probable cadmium/zinc-transporting ATPase HMA1, chloroplastic [Glycin... [more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015691 cadmium ion transport
biological_process GO:0008152 metabolic process
biological_process GO:0006829 zinc II ion transport
biological_process GO:0055076 transition metal ion homeostasis
biological_process GO:0098662 inorganic cation transmembrane transport
biological_process GO:0071577 zinc II ion transmembrane transport
biological_process GO:0055069 zinc ion homeostasis
biological_process GO:0009636 response to toxic substance
biological_process GO:0009642 response to light intensity
biological_process GO:0006812 cation transport
biological_process GO:0006878 cellular copper ion homeostasis
biological_process GO:0070588 calcium ion transmembrane transport
biological_process GO:0070574 cadmium ion transmembrane transport
cellular_component GO:0009507 chloroplast
cellular_component GO:0005887 integral component of plasma membrane
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0016529 sarcoplasmic reticulum
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0008551 cadmium-exporting ATPase activity
molecular_function GO:0015434 cadmium-transporting ATPase activity
molecular_function GO:0015633 zinc-transporting ATPase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0015086 cadmium ion transmembrane transporter activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0016463 zinc-exporting ATPase activity
molecular_function GO:0015662 ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism
molecular_function GO:0019829 cation-transporting ATPase activity
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0005385 zinc ion transmembrane transporter activity
molecular_function GO:0005388 calcium-transporting ATPase activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi10G001810.1Lsi10G001810.1mRNA