Lsi10G001740 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi10G001740
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionReceptor-like protein kinase, putative
Locationchr10 : 2801918 .. 2802580 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAACAATGCTTTTCCTCTTCCACCTCTTTCCTCTCTTACTTCTTCAATTCTCTTCCTCTTTAGCTTACTCTCCTCCTGATAAGTATTTCCTCAACTGTGGATCAAAATCCGACACCGAACTCATAAACAACCGACGGTTCATCGGCGATGCCAAGCGCAGTGATTGGTTGATCTACCCCGGCGAAAGCGAAGTAGTTAAGAACGAGAGCATCCCAAAATCCATAGATGAAATATACCATTCAGCAAGAGTTTACAAGAAGCCAACATGGTATGTTTTTGGGAACATGAATCCAAATGGAACGTATATGGTTCGTCTCCATTTTTTCCCAACTTTACCTCAAATTATGTCTAAAGCTCGGTTTAATGTATCAGCTAGTTGTGGGTTTCAGTTGTTATCCAATTTCTCAGTTGAAAATGATTTGAAGAAGGCATCAGTTGTTAAGGAATTCGTTTTTGAGGTTAAAGAAGGGGCATTTGGCATCAAATTTTCTCCTTTGGTGGAATCATCTCTGGCTTTTGTGAATGCCATTGAACTCTTTCTTGTTCCTGTGGACATCAAACCAGAGACGGTTCCGGCTCTTTCTCCAGAAGTTAGAAGATTGAACGGTAGTTCCTATATGTTGGCTTCCCAAGCATTCCAAACTGTTCACAGGTGCTAA

mRNA sequence

ATGGCAACAATGCTTTTCCTCTTCCACCTCTTTCCTCTCTTACTTCTTCAATTCTCTTCCTCTTTAGCTTACTCTCCTCCTGATAAGTATTTCCTCAACTGTGGATCAAAATCCGACACCGAACTCATAAACAACCGACGGTTCATCGGCGATGCCAAGCGCAGTGATTGGTTGATCTACCCCGGCGAAAGCGAAGTAGTTAAGAACGAGAGCATCCCAAAATCCATAGATGAAATATACCATTCAGCAAGAGTTTACAAGAAGCCAACATGGTATGTTTTTGGGAACATGAATCCAAATGGAACGTATATGGTTCGTCTCCATTTTTTCCCAACTTTACCTCAAATTATGTCTAAAGCTCGGTTTAATGTATCAGCTAGTTGTGGGTTTCAGTTGTTATCCAATTTCTCAGTTGAAAATGATTTGAAGAAGGCATCAGTTGTTAAGGAATTCGTTTTTGAGGTTAAAGAAGGGGCATTTGGCATCAAATTTTCTCCTTTGGTGGAATCATCTCTGGCTTTTGTGAATGCCATTGAACTCTTTCTTGTTCCTGTGGACATCAAACCAGAGACGGTTCCGGCTCTTTCTCCAGAAGTTAGAAGATTGAACGGTAGTTCCTATATGTTGGCTTCCCAAGCATTCCAAACTGTTCACAGGTGCTAA

Coding sequence (CDS)

ATGGCAACAATGCTTTTCCTCTTCCACCTCTTTCCTCTCTTACTTCTTCAATTCTCTTCCTCTTTAGCTTACTCTCCTCCTGATAAGTATTTCCTCAACTGTGGATCAAAATCCGACACCGAACTCATAAACAACCGACGGTTCATCGGCGATGCCAAGCGCAGTGATTGGTTGATCTACCCCGGCGAAAGCGAAGTAGTTAAGAACGAGAGCATCCCAAAATCCATAGATGAAATATACCATTCAGCAAGAGTTTACAAGAAGCCAACATGGTATGTTTTTGGGAACATGAATCCAAATGGAACGTATATGGTTCGTCTCCATTTTTTCCCAACTTTACCTCAAATTATGTCTAAAGCTCGGTTTAATGTATCAGCTAGTTGTGGGTTTCAGTTGTTATCCAATTTCTCAGTTGAAAATGATTTGAAGAAGGCATCAGTTGTTAAGGAATTCGTTTTTGAGGTTAAAGAAGGGGCATTTGGCATCAAATTTTCTCCTTTGGTGGAATCATCTCTGGCTTTTGTGAATGCCATTGAACTCTTTCTTGTTCCTGTGGACATCAAACCAGAGACGGTTCCGGCTCTTTCTCCAGAAGTTAGAAGATTGAACGGTAGTTCCTATATGTTGGCTTCCCAAGCATTCCAAACTGTTCACAGGTGCTAA

Protein sequence

MATMLFLFHLFPLLLLQFSSSLAYSPPDKYFLNCGSKSDTELINNRRFIGDAKRSDWLIYPGESEVVKNESIPKSIDEIYHSARVYKKPTWYVFGNMNPNGTYMVRLHFFPTLPQIMSKARFNVSASCGFQLLSNFSVENDLKKASVVKEFVFEVKEGAFGIKFSPLVESSLAFVNAIELFLVPVDIKPETVPALSPEVRRLNGSSYMLASQAFQTVHRC
Homology
[Close]
BLAST of Lsi10G001740 vs. Swiss-Prot
Match: THE1_ARATH (Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana GN=THE1 PE=1 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.6e-16
Identity = 65/207 (31.40%), Postives = 107/207 (51.69%), Query Frame = 1 

Query: 19  SSSLAYSPPDKYFLNCGSKSDTELINNRRFIGDAKRSDWLIYPGESEVVKNESIPKSIDE 78
           +SS  ++PPD Y ++CGS S      NR F+ D+  S  ++  G S V  + +   S + 
Sbjct: 21  TSSALFNPPDNYLISCGS-SQNITFQNRIFVPDSLHSSLVLKIGNSSVATSTTSNNSTNS 80

Query: 79  IYHSARVYKKPTWYVFGNMNPNGTYMVRLHFFPTLPQIMSKARFNVSASC------GFQL 138
           IY +ARV+     Y F  +   G + +RLHF P     ++ + +N++++        F L
Sbjct: 81  IYQTARVFSSLASYRF-KITSLGRHWIRLHFSP-----INNSTWNLTSASITVVTEDFVL 140

Query: 139 LSNFSVENDLKKASVVKEFVFEVKEGAFGIKFSPLVESSLAFVNAIELFLVPVDIKPETV 198
           L+NFS  N+   + + KE+   V      + F P   +S+ FVNAIE+  VP ++ P+  
Sbjct: 141 LNNFSF-NNFNGSYIFKEYTVNVTSEFLTLSFIPS-NNSVVFVNAIEVVSVPDNLIPDQA 200

Query: 199 PALSPEVRRLNGSSYMLASQAFQTVHR 220
            AL+P     +G S +    AF+TV+R
Sbjct: 201 LALNPST-PFSGLSLL----AFETVYR 213

[Close]
BLAST of Lsi10G001740 vs. Swiss-Prot
Match: Y4391_ARATH (Probable receptor-like protein kinase At4g39110 OS=Arabidopsis thaliana GN=At4g39110 PE=3 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 2.0e-14
Identity = 61/200 (30.50%), Postives = 104/200 (52.00%), Query Frame = 1 

Query: 24  YSPPDKYFLNCGSKSDTELINNRRFIGDAKRSDWLIYPGESEVVKNESIPKSIDEIYHSA 83
           + P D   ++CGSKS ++  + R F  D +   ++    + +V    S  K    IY +A
Sbjct: 52  FKPADDILIDCGSKSSSKTPDGRVFKSDQETIQYIEAKEDIQVSAPPS-DKVASPIYLTA 111

Query: 84  RVYKKPTWYVFGNMNPNGTYMVRLHF--FPTLPQIMSKARFNVSASCGFQLLSNFSVEND 143
           R++++   Y F    P G + VRLHF  FP     + +A F+V     + LL NF + N+
Sbjct: 112 RIFREEATYKFHLTRP-GWHWVRLHFLAFPNDKFDLQQATFSVLTE-KYVLLHNFKISNN 171

Query: 144 LK--KASVVKEFVFEVKEGAFGIKFSPLVESSLAFVNAIELFLVPVDIKPETVPALSPEV 203
               +A+V KE++  + +  F ++F P+ +SS AF+NAIE+   P ++  ++  AL P +
Sbjct: 172 NNDSQAAVQKEYLVNMTDAQFALRFRPM-KSSAAFINAIEVVSAPDELISDSGTALFPVI 231

Query: 204 RRLNGSSYMLASQAFQTVHR 220
                S Y     A+Q+V+R
Sbjct: 232 GFSGLSDY-----AYQSVYR 242

[Close]
BLAST of Lsi10G001740 vs. Swiss-Prot
Match: Y2232_ARATH (Probable receptor-like protein kinase At2g23200 OS=Arabidopsis thaliana GN=At2g23200 PE=3 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 8.2e-13
Identity = 68/209 (32.54%), Postives = 113/209 (54.07%), Query Frame = 1 

Query: 5   LFLFHLFPLLL--LQFSSSLAYSPPDKYFLNCGSKSDTELINNRRFIGDAKRS-DWLIYP 64
           LF+  +  +LL  L  S +  Y+ P+ +++NCGS S+      + F+GD   S + + + 
Sbjct: 12  LFITIMVLVLLPRLSLSDTSTYTRPENFYVNCGSDSNV-FYGGQTFVGDTNSSTNSVSFT 71

Query: 65  GE-SEVVKNESIPKSIDEIYHSARVYKKPTWYVFGNMNPNGTYMVRLHFFPTLPQI-MSK 124
            + +EV+ ++S      EIY + R+++ P+ Y F  ++  G + VRLHF     +  +  
Sbjct: 72  NKGTEVINDQS--SVAPEIYRTVRIFRHPSSYKF-KLDSLGLHFVRLHFSVVFSRADLLT 131

Query: 125 ARFNVSASCGF-QLLSNFSVENDLKKASVVKEFVFEVKEGAFGIKFSPLVESSLAFVNAI 184
           ARF VSA+ G    L +FS +N L     V+EF+  +    F I+F P   SSLA +NAI
Sbjct: 132 ARFTVSATSGSNHHLKSFSPQN-LTNTPRVEEFLLMMNSLEFEIRFVP-DHSSLALINAI 191

Query: 185 ELFLVPVDIKPETVPALSPE----VRRLN 204
           E+F  P D++   +P+ S +    + RLN
Sbjct: 192 EVFSAPDDLE---IPSASDKNLHTIYRLN 211

[Close]
BLAST of Lsi10G001740 vs. Swiss-Prot
Match: Y5613_ARATH (Probable receptor-like protein kinase At5g61350 OS=Arabidopsis thaliana GN=At5g61350 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 7.7e-11
Identity = 62/217 (28.57%), Postives = 109/217 (50.23%), Query Frame = 1 

Query: 10  LFPLLLLQFSSSLAYSPPDKYFLNCGSKSDTELINNRRFIGDAKRSDWLIYPGESEVVKN 69
           L  L LL   SS +++P D Y ++CGS  +T+L + R F  D ++S   +   E      
Sbjct: 14  LLLLFLLIVKSSSSFTPADNYLIDCGSSDETKLSDGRNFKSD-QQSVAFLQTDEDIKTSV 73

Query: 70  ESIP-----KSIDEIYHSARVYKKPTWYVFGNMNPNGTYMVRLHFFPTLPQI--MSKARF 129
           +SIP      S   +Y +AR++   + Y F    P G + +RLHF+P    +  ++ + F
Sbjct: 74  DSIPITDSNASTLPLYLTARIFAGKSTYSFYISRP-GRHWIRLHFYPLNHPLYNLTNSVF 133

Query: 130 NVSASCGFQLLSNFSVENDLKKASVVKEFVFEVKEGAFGIKFSPLVESSLAFVNAIELFL 189
           +V+      LL +FS  +    + V KE++    E    + F P  + S AF+NA+E+  
Sbjct: 134 SVTTDTTV-LLHDFSAGD--TSSIVFKEYLIYAAE-KLSLYFKP-HKGSTAFINAVEIVS 193

Query: 190 VPVDIKPETVPALSPEVRRLNGSSYMLASQAFQTVHR 220
           VP ++ P++  ++ P+     G    L+S + + +HR
Sbjct: 194 VPDELVPDSASSV-PQAPDFKG----LSSFSLEILHR 218

[Close]
BLAST of Lsi10G001740 vs. TrEMBL
Match: A0A0A0LR61_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G425790 PE=3 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 6.8e-83
Identity = 163/220 (74.09%), Postives = 186/220 (84.55%), Query Frame = 1 

Query: 1   MATMLFLFHLFPLLLLQFSSSLAYSPPDKYFLNCGSKSDTELINNRRFIGDAKRSDWLIY 60
           M  +LFL HL PLLLLQ  SS AY+PPDKYFLNCGSK DTELINNRRFIGD K S W IY
Sbjct: 1   MPIILFLSHLIPLLLLQLFSSSAYTPPDKYFLNCGSKYDTELINNRRFIGDNKASGWWIY 60

Query: 61  PGESEVVKNESIPKSIDEI-YHSARVYKKPTWYVFGNMNPNGTYMVRLHFFPTLPQIMSK 120
           PG+S+ VKN +IPKS +EI Y +AR+Y KPTWYVFGN+NPNGTYMVRLHFFPTLP+IMS+
Sbjct: 61  PGKSKAVKNHTIPKSANEIIYQTARIYVKPTWYVFGNINPNGTYMVRLHFFPTLPEIMSQ 120

Query: 121 ARFNVSASCGFQLLSNFSVENDLKKASVVKEFVFEVKEGAFGIKFSPLVESSLAFVNAIE 180
           A+FNVS SCGFQLLSNFSV NDL K  VVKE+ F ++EGAFGIKFSP+ +SSLAFVNAIE
Sbjct: 121 AKFNVSVSCGFQLLSNFSVGNDL-KTEVVKEYTFGIEEGAFGIKFSPM-QSSLAFVNAIE 180

Query: 181 LFLVPVDIKPETVPALSPEVRRLNGSSYMLASQAFQTVHR 220
           LFLVP DIKP++   +SPEV R+NGS Y L SQAFQ+V+R
Sbjct: 181 LFLVPDDIKPKSAFPISPEV-RMNGSEYRLDSQAFQSVYR 217

[Close]
BLAST of Lsi10G001740 vs. TrEMBL
Match: A0A0A0LTD8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G425780 PE=3 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 2.0e-82
Identity = 161/219 (73.52%), Postives = 185/219 (84.47%), Query Frame = 1 

Query: 1   MATMLFLFHLFPLLLLQFSSSLAYSPPDKYFLNCGSKSDTELINNRRFIGDAKRSDWLIY 60
           MA MLFL HL PLLLLQFSSSLAYSPP+KYFLNCGS+SDTELIN RRF+GDAK +DW IY
Sbjct: 1   MAIMLFLSHLLPLLLLQFSSSLAYSPPNKYFLNCGSESDTELINKRRFVGDAKPNDWSIY 60

Query: 61  PGESEVVKNESIPKSIDEIYHSARVYKKPTWYVFGNMNPNGTYMVRLHFFPTLPQIMSKA 120
           PG+S++V+N +IPKSI+EIY +ARVY K TWYVF N+ PNGTY+VRLHFFPTLPQIMS+A
Sbjct: 61  PGKSKIVQNTTIPKSINEIYQTARVYNKATWYVFHNITPNGTYVVRLHFFPTLPQIMSQA 120

Query: 121 RFNVSASCGFQLLSNFSVENDLKKASVVKEFVFEVKEGAFGIKFSPLVESSLAFVNAIEL 180
           RFNVS SCGF LLSNFSVENDL KA+VVKEF F V +G FGI FSP+ ESSLAFVNAIEL
Sbjct: 121 RFNVSVSCGFVLLSNFSVENDL-KAAVVKEFAFAVNDGPFGIGFSPM-ESSLAFVNAIEL 180

Query: 181 FLVPVDIKPETVPALSPEVRRLNGSSYMLASQAFQTVHR 220
           FL P D KP++V  +SPEVRR+N + Y L   A+  V+R
Sbjct: 181 FLAPGDFKPDSVFPISPEVRRMN-TMYTLTFDAWNAVYR 216

[Close]
BLAST of Lsi10G001740 vs. TrEMBL
Match: A0A0D2TJD2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G218600 PE=3 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 2.1e-31
Identity = 91/208 (43.75%), Postives = 128/208 (61.54%), Query Frame = 1 

Query: 13  LLLLQFSSSLAYSPPDKYFLNCGSKSDTELINNRRFIGDAKRSDWLIYPGESEVVKNESI 72
           LLLL FSS  AY+PP +YF+NCGS S+      R+F+GD   S    + G+S  V + + 
Sbjct: 12  LLLLPFSS--AYTPPHQYFINCGSNSNVSGSGGRKFVGDLN-SGVSFFVGQSSPVPHAN- 71

Query: 73  PKSIDEIYHSARVYKKPTWYVFGNMNPNGTYMVRLHFFPTLPQI-MSKARFNVSASCGFQ 132
             S  ++Y SAR+Y+ P +Y F  +N NGTY VRLHFF +     ++ A+FNVSAS GF 
Sbjct: 72  -PSSSQLYQSARIYRHPFFYEFV-INENGTYFVRLHFFVSSSDSNLATAKFNVSAS-GFW 131

Query: 133 LLSNFSVENDLKKASVVKEFVFEVKEGAFGIKFSPLVESSLAFVNAIELFLVPVDIKPET 192
           LLSNF++ N +  + ++KEF+  + E  F I F P   S+LAFVNAIE+FL P D  P+T
Sbjct: 132 LLSNFALRNSIS-SPIIKEFLVTINEKRFRICFIPSQGSNLAFVNAIEVFLAPEDFIPDT 191

Query: 193 VPALSPEVRRLNGSSYMLASQAFQTVHR 220
              ++P   R++     L+SQ   T+ R
Sbjct: 192 ASLVTPAGSRISFDG--LSSQVLHTLFR 209

[Close]
BLAST of Lsi10G001740 vs. TrEMBL
Match: A0A0D2SIC9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G117300 PE=3 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 2.3e-30
Identity = 93/225 (41.33%), Postives = 132/225 (58.67%), Query Frame = 1 

Query: 7   LFHLFPL-----------LLLQFSSSLAYSPPDKYFLNCGSKSDTELINNRRFIGDAKRS 66
           L+HL PL           LLL  S S AY+PPDKYF+NCGS S+      R F+GD   S
Sbjct: 36  LYHLTPLMEKLQNLLLLQLLLLLSLSSAYTPPDKYFINCGSNSNVSGSGGRNFVGDL-NS 95

Query: 67  DWLIYPGESEVVKNESIPKSIDEIYHSARVYKKPTWYVFGNMNPNGTYMVRLHFF-PTLP 126
               + G+S  V   +   S  ++Y SAR+Y++P++Y F  +N +GTY VRLHFF  +  
Sbjct: 96  GVSFFVGQSSPVPYAN--PSSSQLYQSARIYRRPSFYEF-VINESGTYFVRLHFFVSSSD 155

Query: 127 QIMSKARFNVSASCGFQLLSNFSVENDLKKASVVKEFVFEVKEGAFGIKFSPLVESSLAF 186
             ++ A+FNVSAS GF LLS+F+++N +  + V+K+F+  +    F I F P   S+LAF
Sbjct: 156 SNLATAKFNVSAS-GFWLLSDFTLKNSI-SSPVIKDFLVTINVKRFRIYFIPSHGSNLAF 215

Query: 187 VNAIELFLVPVDIKPETVPALSPEVRRLNGSSYMLASQAFQTVHR 220
           VNAIE+FL P D  P+T   ++P   R++     L SQ   T+ R
Sbjct: 216 VNAIEVFLTPEDFIPDTASRVTPAGSRISFDG--LPSQVLHTLFR 252

[Close]
BLAST of Lsi10G001740 vs. TrEMBL
Match: A5BGL8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030033 PE=3 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.5e-29
Identity = 89/214 (41.59%), Postives = 128/214 (59.81%), Query Frame = 1 

Query: 10  LFPLLLLQFSS-SLAYSPPDKYFLNCGSKSDTELINNRRFIGD-AKRSDWLIYPGESEVV 69
           L PL LL   S SL+Y+PP KYF+NCGS+++T     R F+GD +  S + + P   + V
Sbjct: 17  LLPLQLLSLQSLSLSYTPPSKYFINCGSQNNTN-HTGRTFVGDVSSDSSFTLSPKRDDPV 76

Query: 70  KNESIPKSIDEIYHSARVYKKPTWYVFGNMNPNGTYMVRLHFFP-TLPQIMSKARFNVSA 129
            + S   +  ++Y +AR++K  + YVF +++ NGTY+VRLHFFP + P  +S A F+VS 
Sbjct: 77  VDSSPSPTTSQLYQTARIFKGSSSYVF-HIDQNGTYLVRLHFFPFSSPTDLSTALFDVSV 136

Query: 130 SCGFQLLSNFSVENDLKKASVVKEFVFEVKEGAFGIKFSPLVESSLAFVNAIELFLVPVD 189
           S    LL NFSV+N      ++KEF+  +    F +KF P  ESS AFVNAIE+F+ P  
Sbjct: 137 SGLPGLLQNFSVQN-TSNLPLIKEFLLTINISKFTVKFEPSQESSFAFVNAIEVFIAPDS 196

Query: 190 IKPETVPALSPEVRRLNGSSYM-LASQAFQTVHR 220
             P++  AL    +    SSY  L S+  Q +HR
Sbjct: 197 FIPDS--ALLVTRKGSKSSSYKGLLSRVLQKIHR 225

[Close]
BLAST of Lsi10G001740 vs. TAIR10
Match: AT5G54380.1 (AT5G54380.1 protein kinase family protein)

HSP 1 Score: 87.8 bits (216), Expect = 9.0e-18
Identity = 65/207 (31.40%), Postives = 107/207 (51.69%), Query Frame = 1 

Query: 19  SSSLAYSPPDKYFLNCGSKSDTELINNRRFIGDAKRSDWLIYPGESEVVKNESIPKSIDE 78
           +SS  ++PPD Y ++CGS S      NR F+ D+  S  ++  G S V  + +   S + 
Sbjct: 21  TSSALFNPPDNYLISCGS-SQNITFQNRIFVPDSLHSSLVLKIGNSSVATSTTSNNSTNS 80

Query: 79  IYHSARVYKKPTWYVFGNMNPNGTYMVRLHFFPTLPQIMSKARFNVSASC------GFQL 138
           IY +ARV+     Y F  +   G + +RLHF P     ++ + +N++++        F L
Sbjct: 81  IYQTARVFSSLASYRF-KITSLGRHWIRLHFSP-----INNSTWNLTSASITVVTEDFVL 140

Query: 139 LSNFSVENDLKKASVVKEFVFEVKEGAFGIKFSPLVESSLAFVNAIELFLVPVDIKPETV 198
           L+NFS  N+   + + KE+   V      + F P   +S+ FVNAIE+  VP ++ P+  
Sbjct: 141 LNNFSF-NNFNGSYIFKEYTVNVTSEFLTLSFIPS-NNSVVFVNAIEVVSVPDNLIPDQA 200

Query: 199 PALSPEVRRLNGSSYMLASQAFQTVHR 220
            AL+P     +G S +    AF+TV+R
Sbjct: 201 LALNPST-PFSGLSLL----AFETVYR 213

[Close]
BLAST of Lsi10G001740 vs. TAIR10
Match: AT4G39110.1 (AT4G39110.1 Malectin/receptor-like protein kinase family protein)

HSP 1 Score: 80.9 bits (198), Expect = 1.1e-15
Identity = 61/200 (30.50%), Postives = 104/200 (52.00%), Query Frame = 1 

Query: 24  YSPPDKYFLNCGSKSDTELINNRRFIGDAKRSDWLIYPGESEVVKNESIPKSIDEIYHSA 83
           + P D   ++CGSKS ++  + R F  D +   ++    + +V    S  K    IY +A
Sbjct: 52  FKPADDILIDCGSKSSSKTPDGRVFKSDQETIQYIEAKEDIQVSAPPS-DKVASPIYLTA 111

Query: 84  RVYKKPTWYVFGNMNPNGTYMVRLHF--FPTLPQIMSKARFNVSASCGFQLLSNFSVEND 143
           R++++   Y F    P G + VRLHF  FP     + +A F+V     + LL NF + N+
Sbjct: 112 RIFREEATYKFHLTRP-GWHWVRLHFLAFPNDKFDLQQATFSVLTE-KYVLLHNFKISNN 171

Query: 144 LK--KASVVKEFVFEVKEGAFGIKFSPLVESSLAFVNAIELFLVPVDIKPETVPALSPEV 203
               +A+V KE++  + +  F ++F P+ +SS AF+NAIE+   P ++  ++  AL P +
Sbjct: 172 NNDSQAAVQKEYLVNMTDAQFALRFRPM-KSSAAFINAIEVVSAPDELISDSGTALFPVI 231

Query: 204 RRLNGSSYMLASQAFQTVHR 220
                S Y     A+Q+V+R
Sbjct: 232 GFSGLSDY-----AYQSVYR 242

[Close]
BLAST of Lsi10G001740 vs. TAIR10
Match: AT2G23200.1 (AT2G23200.1 Protein kinase superfamily protein)

HSP 1 Score: 75.5 bits (184), Expect = 4.6e-14
Identity = 68/209 (32.54%), Postives = 113/209 (54.07%), Query Frame = 1 

Query: 5   LFLFHLFPLLL--LQFSSSLAYSPPDKYFLNCGSKSDTELINNRRFIGDAKRS-DWLIYP 64
           LF+  +  +LL  L  S +  Y+ P+ +++NCGS S+      + F+GD   S + + + 
Sbjct: 12  LFITIMVLVLLPRLSLSDTSTYTRPENFYVNCGSDSNV-FYGGQTFVGDTNSSTNSVSFT 71

Query: 65  GE-SEVVKNESIPKSIDEIYHSARVYKKPTWYVFGNMNPNGTYMVRLHFFPTLPQI-MSK 124
            + +EV+ ++S      EIY + R+++ P+ Y F  ++  G + VRLHF     +  +  
Sbjct: 72  NKGTEVINDQS--SVAPEIYRTVRIFRHPSSYKF-KLDSLGLHFVRLHFSVVFSRADLLT 131

Query: 125 ARFNVSASCGF-QLLSNFSVENDLKKASVVKEFVFEVKEGAFGIKFSPLVESSLAFVNAI 184
           ARF VSA+ G    L +FS +N L     V+EF+  +    F I+F P   SSLA +NAI
Sbjct: 132 ARFTVSATSGSNHHLKSFSPQN-LTNTPRVEEFLLMMNSLEFEIRFVP-DHSSLALINAI 191

Query: 185 ELFLVPVDIKPETVPALSPE----VRRLN 204
           E+F  P D++   +P+ S +    + RLN
Sbjct: 192 EVFSAPDDLE---IPSASDKNLHTIYRLN 211

[Close]
BLAST of Lsi10G001740 vs. TAIR10
Match: AT5G61350.1 (AT5G61350.1 Protein kinase superfamily protein)

HSP 1 Score: 68.9 bits (167), Expect = 4.3e-12
Identity = 62/217 (28.57%), Postives = 109/217 (50.23%), Query Frame = 1 

Query: 10  LFPLLLLQFSSSLAYSPPDKYFLNCGSKSDTELINNRRFIGDAKRSDWLIYPGESEVVKN 69
           L  L LL   SS +++P D Y ++CGS  +T+L + R F  D ++S   +   E      
Sbjct: 14  LLLLFLLIVKSSSSFTPADNYLIDCGSSDETKLSDGRNFKSD-QQSVAFLQTDEDIKTSV 73

Query: 70  ESIP-----KSIDEIYHSARVYKKPTWYVFGNMNPNGTYMVRLHFFPTLPQI--MSKARF 129
           +SIP      S   +Y +AR++   + Y F    P G + +RLHF+P    +  ++ + F
Sbjct: 74  DSIPITDSNASTLPLYLTARIFAGKSTYSFYISRP-GRHWIRLHFYPLNHPLYNLTNSVF 133

Query: 130 NVSASCGFQLLSNFSVENDLKKASVVKEFVFEVKEGAFGIKFSPLVESSLAFVNAIELFL 189
           +V+      LL +FS  +    + V KE++    E    + F P  + S AF+NA+E+  
Sbjct: 134 SVTTDTTV-LLHDFSAGD--TSSIVFKEYLIYAAE-KLSLYFKP-HKGSTAFINAVEIVS 193

Query: 190 VPVDIKPETVPALSPEVRRLNGSSYMLASQAFQTVHR 220
           VP ++ P++  ++ P+     G    L+S + + +HR
Sbjct: 194 VPDELVPDSASSV-PQAPDFKG----LSSFSLEILHR 218

[Close]
BLAST of Lsi10G001740 vs. NCBI nr
Match: gi|778673640|ref|XP_004151918.2| (PREDICTED: probable receptor-like protein kinase At2g23200 [Cucumis sativus])

HSP 1 Score: 315.1 bits (806), Expect = 9.8e-83
Identity = 163/220 (74.09%), Postives = 186/220 (84.55%), Query Frame = 1 

Query: 1   MATMLFLFHLFPLLLLQFSSSLAYSPPDKYFLNCGSKSDTELINNRRFIGDAKRSDWLIY 60
           M  +LFL HL PLLLLQ  SS AY+PPDKYFLNCGSK DTELINNRRFIGD K S W IY
Sbjct: 1   MPIILFLSHLIPLLLLQLFSSSAYTPPDKYFLNCGSKYDTELINNRRFIGDNKASGWWIY 60

Query: 61  PGESEVVKNESIPKSIDEI-YHSARVYKKPTWYVFGNMNPNGTYMVRLHFFPTLPQIMSK 120
           PG+S+ VKN +IPKS +EI Y +AR+Y KPTWYVFGN+NPNGTYMVRLHFFPTLP+IMS+
Sbjct: 61  PGKSKAVKNHTIPKSANEIIYQTARIYVKPTWYVFGNINPNGTYMVRLHFFPTLPEIMSQ 120

Query: 121 ARFNVSASCGFQLLSNFSVENDLKKASVVKEFVFEVKEGAFGIKFSPLVESSLAFVNAIE 180
           A+FNVS SCGFQLLSNFSV NDL K  VVKE+ F ++EGAFGIKFSP+ +SSLAFVNAIE
Sbjct: 121 AKFNVSVSCGFQLLSNFSVGNDL-KTEVVKEYTFGIEEGAFGIKFSPM-QSSLAFVNAIE 180

Query: 181 LFLVPVDIKPETVPALSPEVRRLNGSSYMLASQAFQTVHR 220
           LFLVP DIKP++   +SPEV R+NGS Y L SQAFQ+V+R
Sbjct: 181 LFLVPDDIKPKSAFPISPEV-RMNGSEYRLDSQAFQSVYR 217

[Close]
BLAST of Lsi10G001740 vs. NCBI nr
Match: gi|449468420|ref|XP_004151919.1| (PREDICTED: probable receptor-like protein kinase At2g23200 [Cucumis sativus])

HSP 1 Score: 313.5 bits (802), Expect = 2.9e-82
Identity = 161/219 (73.52%), Postives = 185/219 (84.47%), Query Frame = 1 

Query: 1   MATMLFLFHLFPLLLLQFSSSLAYSPPDKYFLNCGSKSDTELINNRRFIGDAKRSDWLIY 60
           MA MLFL HL PLLLLQFSSSLAYSPP+KYFLNCGS+SDTELIN RRF+GDAK +DW IY
Sbjct: 1   MAIMLFLSHLLPLLLLQFSSSLAYSPPNKYFLNCGSESDTELINKRRFVGDAKPNDWSIY 60

Query: 61  PGESEVVKNESIPKSIDEIYHSARVYKKPTWYVFGNMNPNGTYMVRLHFFPTLPQIMSKA 120
           PG+S++V+N +IPKSI+EIY +ARVY K TWYVF N+ PNGTY+VRLHFFPTLPQIMS+A
Sbjct: 61  PGKSKIVQNTTIPKSINEIYQTARVYNKATWYVFHNITPNGTYVVRLHFFPTLPQIMSQA 120

Query: 121 RFNVSASCGFQLLSNFSVENDLKKASVVKEFVFEVKEGAFGIKFSPLVESSLAFVNAIEL 180
           RFNVS SCGF LLSNFSVENDL KA+VVKEF F V +G FGI FSP+ ESSLAFVNAIEL
Sbjct: 121 RFNVSVSCGFVLLSNFSVENDL-KAAVVKEFAFAVNDGPFGIGFSPM-ESSLAFVNAIEL 180

Query: 181 FLVPVDIKPETVPALSPEVRRLNGSSYMLASQAFQTVHR 220
           FL P D KP++V  +SPEVRR+N + Y L   A+  V+R
Sbjct: 181 FLAPGDFKPDSVFPISPEVRRMN-TMYTLTFDAWNAVYR 216

[Close]
BLAST of Lsi10G001740 vs. NCBI nr
Match: gi|659111589|ref|XP_008455811.1| (PREDICTED: probable receptor-like protein kinase At2g23200 [Cucumis melo])

HSP 1 Score: 288.9 bits (738), Expect = 7.5e-75
Identity = 150/205 (73.17%), Postives = 174/205 (84.88%), Query Frame = 1 

Query: 1   MATMLFL-FHLFPLLLLQFSSSLAYSPPDKYFLNCGSKSDTELINNRRFIGDAKRSDWLI 60
           MAT+LF+ FHL PLL LQ S S AY+ PDKYFLNCGSKSDTELINNRRFIGDA    + I
Sbjct: 1   MATILFMIFHLLPLLFLQLSFSSAYTRPDKYFLNCGSKSDTELINNRRFIGDANARHFSI 60

Query: 61  YPGESEVVKNESIPKSIDEIYHSARVYKKPTWYVFGNMNPNGTYMVRLHFFPTLPQIMSK 120
           YPG+S+ V N++IPKS++EIY +ARVY KPTWYVFG++NPNGTY+VRLHFFPTLP+IMS+
Sbjct: 61  YPGKSKKVNNDTIPKSVNEIYGTARVYNKPTWYVFGDINPNGTYVVRLHFFPTLPEIMSQ 120

Query: 121 ARFNVSASCGFQLLSNFSVENDLKKASVVKEFVFEVKEGAFGIKFSPLVESSLAFVNAIE 180
           A+FNVS SCGFQLLSNFS+ NDLK A VVKEF  E++EGAFGIKFSP+ ESS+AFVNAIE
Sbjct: 121 AKFNVSVSCGFQLLSNFSIGNDLKTA-VVKEFTLEIEEGAFGIKFSPM-ESSMAFVNAIE 180

Query: 181 LFLVPVDIKPETVPALSPEVRRLNG 205
           LF VP  IKPE+    SPEV R+NG
Sbjct: 181 LFHVPDYIKPESAFPFSPEV-RMNG 202

[Close]
BLAST of Lsi10G001740 vs. NCBI nr
Match: gi|823192880|ref|XP_012491900.1| (PREDICTED: probable receptor-like protein kinase At5g24010 [Gossypium raimondii])

HSP 1 Score: 144.1 bits (362), Expect = 3.0e-31
Identity = 91/208 (43.75%), Postives = 128/208 (61.54%), Query Frame = 1 

Query: 13  LLLLQFSSSLAYSPPDKYFLNCGSKSDTELINNRRFIGDAKRSDWLIYPGESEVVKNESI 72
           LLLL FSS  AY+PP +YF+NCGS S+      R+F+GD   S    + G+S  V + + 
Sbjct: 12  LLLLPFSS--AYTPPHQYFINCGSNSNVSGSGGRKFVGDLN-SGVSFFVGQSSPVPHAN- 71

Query: 73  PKSIDEIYHSARVYKKPTWYVFGNMNPNGTYMVRLHFFPTLPQI-MSKARFNVSASCGFQ 132
             S  ++Y SAR+Y+ P +Y F  +N NGTY VRLHFF +     ++ A+FNVSAS GF 
Sbjct: 72  -PSSSQLYQSARIYRHPFFYEFV-INENGTYFVRLHFFVSSSDSNLATAKFNVSAS-GFW 131

Query: 133 LLSNFSVENDLKKASVVKEFVFEVKEGAFGIKFSPLVESSLAFVNAIELFLVPVDIKPET 192
           LLSNF++ N +  + ++KEF+  + E  F I F P   S+LAFVNAIE+FL P D  P+T
Sbjct: 132 LLSNFALRNSIS-SPIIKEFLVTINEKRFRICFIPSQGSNLAFVNAIEVFLAPEDFIPDT 191

Query: 193 VPALSPEVRRLNGSSYMLASQAFQTVHR 220
              ++P   R++     L+SQ   T+ R
Sbjct: 192 ASLVTPAGSRISFDG--LSSQVLHTLFR 209

[Close]
BLAST of Lsi10G001740 vs. NCBI nr
Match: gi|823187665|ref|XP_012490258.1| (PREDICTED: probable receptor-like protein kinase At5g24010 [Gossypium raimondii])

HSP 1 Score: 140.6 bits (353), Expect = 3.3e-30
Identity = 93/225 (41.33%), Postives = 132/225 (58.67%), Query Frame = 1 

Query: 7   LFHLFPL-----------LLLQFSSSLAYSPPDKYFLNCGSKSDTELINNRRFIGDAKRS 66
           L+HL PL           LLL  S S AY+PPDKYF+NCGS S+      R F+GD   S
Sbjct: 36  LYHLTPLMEKLQNLLLLQLLLLLSLSSAYTPPDKYFINCGSNSNVSGSGGRNFVGDL-NS 95

Query: 67  DWLIYPGESEVVKNESIPKSIDEIYHSARVYKKPTWYVFGNMNPNGTYMVRLHFF-PTLP 126
               + G+S  V   +   S  ++Y SAR+Y++P++Y F  +N +GTY VRLHFF  +  
Sbjct: 96  GVSFFVGQSSPVPYAN--PSSSQLYQSARIYRRPSFYEF-VINESGTYFVRLHFFVSSSD 155

Query: 127 QIMSKARFNVSASCGFQLLSNFSVENDLKKASVVKEFVFEVKEGAFGIKFSPLVESSLAF 186
             ++ A+FNVSAS GF LLS+F+++N +  + V+K+F+  +    F I F P   S+LAF
Sbjct: 156 SNLATAKFNVSAS-GFWLLSDFTLKNSI-SSPVIKDFLVTINVKRFRIYFIPSHGSNLAF 215

Query: 187 VNAIELFLVPVDIKPETVPALSPEVRRLNGSSYMLASQAFQTVHR 220
           VNAIE+FL P D  P+T   ++P   R++     L SQ   T+ R
Sbjct: 216 VNAIEVFLTPEDFIPDTASRVTPAGSRISFDG--LPSQVLHTLFR 252

The following BLAST results are available for this feature:
BLAST of Lsi10G001740 vs. Swiss-Prot
Match NameE-valueIdentityDescription
THE1_ARATH1.6e-1631.40Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana GN=THE1 PE=1 SV=1[more]
Y4391_ARATH2.0e-1430.50Probable receptor-like protein kinase At4g39110 OS=Arabidopsis thaliana GN=At4g3... [more]
Y2232_ARATH8.2e-1332.54Probable receptor-like protein kinase At2g23200 OS=Arabidopsis thaliana GN=At2g2... [more]
Y5613_ARATH7.7e-1128.57Probable receptor-like protein kinase At5g61350 OS=Arabidopsis thaliana GN=At5g6... [more]
BLAST of Lsi10G001740 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LR61_CUCSA6.8e-8374.09Uncharacterized protein OS=Cucumis sativus GN=Csa_2G425790 PE=3 SV=1[more]
A0A0A0LTD8_CUCSA2.0e-8273.52Uncharacterized protein OS=Cucumis sativus GN=Csa_2G425780 PE=3 SV=1[more]
A0A0D2TJD2_GOSRA2.1e-3143.75Uncharacterized protein OS=Gossypium raimondii GN=B456_007G218600 PE=3 SV=1[more]
A0A0D2SIC9_GOSRA2.3e-3041.33Uncharacterized protein OS=Gossypium raimondii GN=B456_007G117300 PE=3 SV=1[more]
A5BGL8_VITVI1.5e-2941.59Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030033 PE=3 SV=1[more]
BLAST of Lsi10G001740 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G54380.19.0e-1831.40 protein kinase family protein[more]
AT4G39110.11.1e-1530.50 Malectin/receptor-like protein kinase family protein[more]
AT2G23200.14.6e-1432.54 Protein kinase superfamily protein[more]
AT5G61350.14.3e-1228.57 Protein kinase superfamily protein[more]
BLAST of Lsi10G001740 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778673640|ref|XP_004151918.2|9.8e-8374.09PREDICTED: probable receptor-like protein kinase At2g23200 [Cucumis sativus][more]
gi|449468420|ref|XP_004151919.1|2.9e-8273.52PREDICTED: probable receptor-like protein kinase At2g23200 [Cucumis sativus][more]
gi|659111589|ref|XP_008455811.1|7.5e-7573.17PREDICTED: probable receptor-like protein kinase At2g23200 [Cucumis melo][more]
gi|823192880|ref|XP_012491900.1|3.0e-3143.75PREDICTED: probable receptor-like protein kinase At5g24010 [Gossypium raimondii][more]
gi|823187665|ref|XP_012490258.1|3.3e-3041.33PREDICTED: probable receptor-like protein kinase At5g24010 [Gossypium raimondii][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR024788Malectin-like_Carb-bd_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006468 protein phosphorylation
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0005524 ATP binding
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi10G001740.1Lsi10G001740.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024788Malectin-like carbohydrate-binding domainPFAMPF12819Malectin_likecoord: 32..187
score: 1.
NoneNo IPR availablePANTHERPTHR27003FAMILY NOT NAMEDcoord: 3..219
score: 2.1
NoneNo IPR availablePANTHERPTHR27003:SF59SUBFAMILY NOT NAMEDcoord: 3..219
score: 2.1