Lsi10G000980 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATAATGTCCAGCAACCCAAATGGAAAATAAGTAATAACTAAATGAAAAAACAGAAAAATAAAACAATCAAACCCTAAAATCAGATTTCCCTCACAAACCCACAGCCTACGATCTTCTCTTCGTCAGTTCGTCGTCAACGCAAGCCCCTCCTCATCTTCTTCTTGTTTATTCGACTGAGCAACTCTATTTTCCAGACCTACGCCGTTCGCCGCCGAGCGTCAACCGACCACGCCTCAACCTCGCCATTGACCATCTCGCCGCCCTTTGCCTTGTCGCCGCCACCGCCGGTAAATTTCAAAGCTCTCTGTTTTCTCCCTCTTTTTTCACTCTCTTTTGAAACCTCCTTTAACTTTAACCTAAATTATTATGTAGATAGTTCTTAATTTTTTAGATTGACAAATCGCCGGATCCTATCGTATTTGTCTCTCGTATTAGTATCTGTGTCTGTACTTCATAGCTTTTTACTTTCTAGAACATTTCTTTTAGAGGACTTTATCGAAAGCTTCAAGTGGATATGAAGATGAAGTAAGTATCTATTTGAGATGAAAAATCGTGGCATAGATGTGGTTTCTACTTAAAACTATCATCTATATCTTTTTATGTTTTAGTTGTGCAACTAGAGCATTTGGTAGAGCTTTCAATCTATTGAAGATGTTCATTTGTTTACTCGAAATTTGGAAACTGCAAAAGTTATCCTGCCCAACAAATTAAAAGATTTTGTTGAGGTGCTTAGATGAGATTGTTGATATGTTTGCAGAGAAAACTGTTTCTTAATCTTTGTTTTGTAGATTTTGGAGATCTTGGACATGAATGCCTTCAAGGCCTTCAAAGCCAATGTCCCAATTGCATGGAGTCCTAATCTTTATATCACATTAGTGAGAGGCATGCCGGGAACAAGGAGACTTCACAGACGCACAATAGAGGCGTTGCGGCTGCGAAAATGCAACCGAACTGTCATGCGCTGGAACACACCTACTGTTAGGGGAATGCTTCAACAGGTTGCTTTATATACATGTTCTCTACTGCGCTCATGCACACACTACAGAAAAGTCTCATGGGGACTGAATGTTGAATGCTGTTGTTTGTTTTTTTTGTTATTTGATTGTAGGTAAAGCGATTAATTGTGGTTGAAACAGAAGAAATGTATAAAGCTCGTAAACAGAAGGTGGAACAGCACAAGGCTCTCCGACCTCCGTTAGTTGTAAATCACCTTCCGGCTTCAAGCTCTGCTCCTGCCTCTTGA ATAATGTCCAGCAACCCAAATGGAAAATAAGTAATAACTAAATGAAAAAACAGAAAAATAAAACAATCAAACCCTAAAATCAGATTTCCCTCACAAACCCACAGCCTACGATCTTCTCTTCGTCAGTTCGTCGTCAACGCAAGCCCCTCCTCATCTTCTTCTTGTTTATTCGACTGAGCAACTCTATTTTCCAGACCTACGCCGTTCGCCGCCGAGCGTCAACCGACCACGCCTCAACCTCGCCATTGACCATCTCGCCGCCCTTTGCCTTGTCGCCGCCACCGCCGATTTTGGAGATCTTGGACATGAATGCCTTCAAGGCCTTCAAAGCCAATGTCCCAATTGCATGGAGTCCTAATCTTTATATCACATTAGTGAGAGGCATGCCGGGAACAAGGAGACTTCACAGACGCACAATAGAGGCGTTGCGGCTGCGAAAATGCAACCGAACTGTCATGCGCTGGAACACACCTACTGTTAGGGGAATGCTTCAACAGGTAAAGCGATTAATTGTGGTTGAAACAGAAGAAATGTATAAAGCTCGTAAACAGAAGGTGGAACAGCACAAGGCTCTCCGACCTCCGTTAGTTGTAAATCACCTTCCGGCTTCAAGCTCTGCTCCTGCCTCTTGA ATGAATGCCTTCAAGGCCTTCAAAGCCAATGTCCCAATTGCATGGAGTCCTAATCTTTATATCACATTAGTGAGAGGCATGCCGGGAACAAGGAGACTTCACAGACGCACAATAGAGGCGTTGCGGCTGCGAAAATGCAACCGAACTGTCATGCGCTGGAACACACCTACTGTTAGGGGAATGCTTCAACAGGTAAAGCGATTAATTGTGGTTGAAACAGAAGAAATGTATAAAGCTCGTAAACAGAAGGTGGAACAGCACAAGGCTCTCCGACCTCCGTTAGTTGTAAATCACCTTCCGGCTTCAAGCTCTGCTCCTGCCTCTTGA MNAFKAFKANVPIAWSPNLYITLVRGMPGTRRLHRRTIEALRLRKCNRTVMRWNTPTVRGMLQQVKRLIVVETEEMYKARKQKVEQHKALRPPLVVNHLPASSSAPAS
BLAST of Lsi10G000980 vs. TrEMBL
Match: A0A0A0LN29_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G416090 PE=3 SV=1) HSP 1 Score: 198.4 bits (503), Expect = 4.6e-48 Identity = 98/108 (90.74%), Postives = 105/108 (97.22%), Query Frame = 1
BLAST of Lsi10G000980 vs. TrEMBL
Match: M5XB62_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012731mg PE=3 SV=1) HSP 1 Score: 193.7 bits (491), Expect = 1.1e-46 Identity = 93/104 (89.42%), Postives = 102/104 (98.08%), Query Frame = 1
BLAST of Lsi10G000980 vs. TrEMBL
Match: A0A067FF83_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g033963mg PE=3 SV=1) HSP 1 Score: 186.8 bits (473), Expect = 1.4e-44 Identity = 89/104 (85.58%), Postives = 100/104 (96.15%), Query Frame = 1
BLAST of Lsi10G000980 vs. TrEMBL
Match: B9GTU5_POPTR (Ribosomal protein L30 OS=Populus trichocarpa GN=POPTR_0002s21620g PE=3 SV=1) HSP 1 Score: 186.4 bits (472), Expect = 1.8e-44 Identity = 90/105 (85.71%), Postives = 100/105 (95.24%), Query Frame = 1
BLAST of Lsi10G000980 vs. TrEMBL
Match: V4UT17_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009985mg PE=3 SV=1) HSP 1 Score: 184.9 bits (468), Expect = 5.2e-44 Identity = 89/104 (85.58%), Postives = 99/104 (95.19%), Query Frame = 1
BLAST of Lsi10G000980 vs. TAIR10
Match: AT5G55140.1 (AT5G55140.1 ribosomal protein L30 family protein) HSP 1 Score: 140.2 bits (352), Expect = 7.5e-34 Identity = 70/109 (64.22%), Postives = 89/109 (81.65%), Query Frame = 1
BLAST of Lsi10G000980 vs. NCBI nr
Match: gi|659111837|ref|XP_008455933.1| (PREDICTED: uncharacterized protein LOC103495997 [Cucumis melo]) HSP 1 Score: 200.3 bits (508), Expect = 1.7e-48 Identity = 98/108 (90.74%), Postives = 106/108 (98.15%), Query Frame = 1
BLAST of Lsi10G000980 vs. NCBI nr
Match: gi|449468386|ref|XP_004151902.1| (PREDICTED: uncharacterized protein LOC101219925 [Cucumis sativus]) HSP 1 Score: 198.4 bits (503), Expect = 6.6e-48 Identity = 98/108 (90.74%), Postives = 105/108 (97.22%), Query Frame = 1
BLAST of Lsi10G000980 vs. NCBI nr
Match: gi|645247803|ref|XP_008230006.1| (PREDICTED: uncharacterized protein LOC103329330 [Prunus mume]) HSP 1 Score: 193.7 bits (491), Expect = 1.6e-46 Identity = 93/104 (89.42%), Postives = 102/104 (98.08%), Query Frame = 1
BLAST of Lsi10G000980 vs. NCBI nr
Match: gi|595927871|ref|XP_007215101.1| (hypothetical protein PRUPE_ppa012731mg [Prunus persica]) HSP 1 Score: 193.7 bits (491), Expect = 1.6e-46 Identity = 93/104 (89.42%), Postives = 102/104 (98.08%), Query Frame = 1
BLAST of Lsi10G000980 vs. NCBI nr
Match: gi|764613434|ref|XP_004304095.2| (PREDICTED: uncharacterized protein LOC101304309 [Fragaria vesca subsp. vesca]) HSP 1 Score: 188.3 bits (477), Expect = 6.8e-45 Identity = 91/108 (84.26%), Postives = 101/108 (93.52%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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