Lsi10G000790 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi10G000790
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	DUF679 domain membrane protein
Location	chr10 : 1319817 .. 1320476 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGGTGAAATCGAGAGCCAAATTCAGCAGGTAGCACCCGGCGAAGGGCTGCTTCGAAAGATCCAGCAGCCATTACTGGAAAACACCCTAACAATGGCTTCAAAGCCAACAAAAACACCAGCTCAAAAAGCCATTAGAAAGACCTTCAAAGGAACAGCTCATTTAGCCAATCTCCTTCCCACAGGAACCGTCCTTGGCTTCCAAATTTTGTCCCCAATTTTCACACACCAAGGTCATTGCAACACCCATGTCAGCCAAACCACCACCCTTGGCCTTGTCTTGCTCTGTGCTCTCTCCTGTTTTTTCCTCCTCTTCACCGACAGTTTCAGAGACGAACGTGGCAAAGTCCGATACGGGGTTGCTACATTGGAAGGCTTATGGGTTATTGATGGCTCAATAACCCTTCCCAAAGAAGAGGCTGCTAAATACAGGCTTCGCTTCATCGATTTCTTTCATGCCTTTGCTTCTCTTTTGGTTTTTATAGCTGTTGCTTTGTTTGATGAAAATGTGGTTAAGTGTTTCTATCCAACGCCGTCTGATGAAACAAGAGAGCTCTTGGTTGTGTTGCCTGTTGGAATTGGTGTCTTGTGCAGCTGCTTTTTTATTGTTTTTCCCTCTAAACGACATGGCGTTGGATTCCCCCTCTCTCGTCAGTAG

mRNA sequence

ATGGAAGGTGAAATCGAGAGCCAAATTCAGCAGGTAGCACCCGGCGAAGGGCTGCTTCGAAAGATCCAGCAGCCATTACTGGAAAACACCCTAACAATGGCTTCAAAGCCAACAAAAACACCAGCTCAAAAAGCCATTAGAAAGACCTTCAAAGGAACAGCTCATTTAGCCAATCTCCTTCCCACAGGAACCGTCCTTGGCTTCCAAATTTTGTCCCCAATTTTCACACACCAAGGTCATTGCAACACCCATGTCAGCCAAACCACCACCCTTGGCCTTGTCTTGCTCTGTGCTCTCTCCTGTTTTTTCCTCCTCTTCACCGACAGTTTCAGAGACGAACGTGGCAAAGTCCGATACGGGGTTGCTACATTGGAAGGCTTATGGGTTATTGATGGCTCAATAACCCTTCCCAAAGAAGAGGCTGCTAAATACAGGCTTCGCTTCATCGATTTCTTTCATGCCTTTGCTTCTCTTTTGGTTTTTATAGCTGTTGCTTTGTTTGATGAAAATGTGGTTAAGTGTTTCTATCCAACGCCGTCTGATGAAACAAGAGAGCTCTTGGTTGTGTTGCCTGTTGGAATTGGTGTCTTGTGCAGCTGCTTTTTTATTGTTTTTCCCTCTAAACGACATGGCGTTGGATTCCCCCTCTCTCGTCAGTAG

Coding sequence (CDS)

ATGGAAGGTGAAATCGAGAGCCAAATTCAGCAGGTAGCACCCGGCGAAGGGCTGCTTCGAAAGATCCAGCAGCCATTACTGGAAAACACCCTAACAATGGCTTCAAAGCCAACAAAAACACCAGCTCAAAAAGCCATTAGAAAGACCTTCAAAGGAACAGCTCATTTAGCCAATCTCCTTCCCACAGGAACCGTCCTTGGCTTCCAAATTTTGTCCCCAATTTTCACACACCAAGGTCATTGCAACACCCATGTCAGCCAAACCACCACCCTTGGCCTTGTCTTGCTCTGTGCTCTCTCCTGTTTTTTCCTCCTCTTCACCGACAGTTTCAGAGACGAACGTGGCAAAGTCCGATACGGGGTTGCTACATTGGAAGGCTTATGGGTTATTGATGGCTCAATAACCCTTCCCAAAGAAGAGGCTGCTAAATACAGGCTTCGCTTCATCGATTTCTTTCATGCCTTTGCTTCTCTTTTGGTTTTTATAGCTGTTGCTTTGTTTGATGAAAATGTGGTTAAGTGTTTCTATCCAACGCCGTCTGATGAAACAAGAGAGCTCTTGGTTGTGTTGCCTGTTGGAATTGGTGTCTTGTGCAGCTGCTTTTTTATTGTTTTTCCCTCTAAACGACATGGCGTTGGATTCCCCCTCTCTCGTCAGTAG

Protein sequence

MEGEIESQIQQVAPGEGLLRKIQQPLLENTLTMASKPTKTPAQKAIRKTFKGTAHLANLLPTGTVLGFQILSPIFTHQGHCNTHVSQTTTLGLVLLCALSCFFLLFTDSFRDERGKVRYGVATLEGLWVIDGSITLPKEEAAKYRLRFIDFFHAFASLLVFIAVALFDENVVKCFYPTPSDETRELLVVLPVGIGVLCSCFFIVFPSKRHGVGFPLSRQ

Homology

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BLAST of Lsi10G000790 vs. TrEMBL
Match: A0A0A0LT42_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G408960 PE=4 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 1.0e-110
Identity = 203/219 (92.69%), Postives = 205/219 (93.61%), Query Frame = 1


Query: 1   MEGEIESQIQQVAPGEGLLRKIQQPLLENTLTMASKPTKTPAQKAIRKTFKGTAHLANLL 60
           MEGEIESQIQQ  P EGLL KIQQPLLEN LTMASKPTKT AQKAIRK FKGTAHLANLL
Sbjct: 1   MEGEIESQIQQAVPTEGLLGKIQQPLLENALTMASKPTKTSAQKAIRKAFKGTAHLANLL 60

Query: 61  PTGTVLGFQILSPIFTHQGHCNTHVSQTTTLGLVLLCALSCFFLLFTDSFRDERGKVRYG 120
           PTGTVLGFQILSPIFTHQGHCNTHVSQTTTLGLVLLCALSCFFLLFTDSFRD RGKVRYG
Sbjct: 61  PTGTVLGFQILSPIFTHQGHCNTHVSQTTTLGLVLLCALSCFFLLFTDSFRDSRGKVRYG 120

Query: 121 VATLEGLWVIDGSITLPKEEAAKYRLRFIDFFHAFASLLVFIAVALFDENVVKCFYPTPS 180
           V T +GLWVIDGSITLPKEEAAKYRLRFIDFFHAF SLLVFIAVALFDENVVKCFYPTPS
Sbjct: 121 VVTFQGLWVIDGSITLPKEEAAKYRLRFIDFFHAFTSLLVFIAVALFDENVVKCFYPTPS 180

Query: 181 DETRELLVVLPVGIGVLCSCFFIVFPSKRHGVGFPLSRQ 220
           DE RELLVVLPVGIGVLCS  FIVFP+KRHGVGFPLSRQ
Sbjct: 181 DELRELLVVLPVGIGVLCSGLFIVFPTKRHGVGFPLSRQ 219

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BLAST of Lsi10G000790 vs. TrEMBL
Match: W9R5J4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_010525 PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 3.4e-74
Identity = 141/205 (68.78%), Postives = 157/205 (76.59%), Query Frame = 1


Query: 22  IQQPLL------ENTLTMASKPTKTPAQKAIRKTFKGTAHLANLLPTGTVLGFQILSPIF 81
           IQQPLL      E     A KP KTPAQKA+RKTFKGTAHLANLLPTG+VL FQILSP F
Sbjct: 21  IQQPLLAGKNNVEAVSAAAEKPAKTPAQKAMRKTFKGTAHLANLLPTGSVLAFQILSPAF 80

Query: 82  THQGHCNTHVSQTTTLGLVLLCALSCFFLLFTDSFRDERGKVRYGVATLEGLWVIDGS-- 141
           THQG C + VSQ TT GL+  CA SCF L FTDSFRD RGKVRYGVAT  GLW++DGS  
Sbjct: 81  THQGQCRSRVSQATTFGLLACCAASCFLLCFTDSFRDARGKVRYGVATFRGLWIVDGSAG 140

Query: 142 ITLPKEEAAKYRLRFIDFFHAFASLLVFIAVALFDENVVKCFYPTPSDETRELLVVLPVG 201
             +  EEA  YRL  IDFFHA ASLLVF AV  FDENVV+CF P PS+E +ELLV +PVG
Sbjct: 141 AVIAAEEAENYRLMVIDFFHALASLLVFAAVVAFDENVVRCFCPAPSEEVKELLVAVPVG 200

Query: 202 IGVLCSCFFIVFPSKRHGVGFPLSR 219
           +GVLCS FF+ FP++RHG+GFPLSR
Sbjct: 201 VGVLCSLFFVAFPTRRHGIGFPLSR 225

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BLAST of Lsi10G000790 vs. TrEMBL
Match: V4UCF7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017623mg PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 9.9e-74
Identity = 139/201 (69.15%), Postives = 163/201 (81.09%), Query Frame = 1


Query: 19  LRKIQQ-PLLENTLTMASKPTKTPAQKAIRKTFKGTAHLANLLPTGTVLGFQILSPIFTH 78
           LR+ QQ PLLEN    A K  KTPAQKAIRKTFKGTAHLA LLPTG+VL FQILSPI TH
Sbjct: 7   LRQQQQLPLLEN----APKAQKTPAQKAIRKTFKGTAHLARLLPTGSVLTFQILSPILTH 66

Query: 79  QGHCNTHVSQTTTLGLVLLCALSCFFLLFTDSFRDERGKVRYGVATLEGLWVIDGSITLP 138
           QG C TH S+  TLGL+ LC +SCF L  TDSFRDERGKVRYG+AT  GLWVID S+ L 
Sbjct: 67  QGRCPTHASRVITLGLLALCGVSCFILRLTDSFRDERGKVRYGLATFRGLWVIDTSLKLA 126

Query: 139 KEEAAKYRLRFIDFFHAFASLLVFIAVALFDENVVKCFYPTPSDETRELLVVLPVGIGVL 198
            EE A+Y+L+FID FHAFAS+LVF  +ALFD+NVV CF+PTPS+ET+ELL+ +P+GIG+ 
Sbjct: 127 PEEKAQYQLKFIDLFHAFASILVFATIALFDKNVVNCFFPTPSEETKELLIRVPIGIGIA 186

Query: 199 CSCFFIVFPSKRHGVGFPLSR 219
           CS  F++FPSKRHG+G PLS+
Sbjct: 187 CSILFVLFPSKRHGIGCPLSK 203

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BLAST of Lsi10G000790 vs. TrEMBL
Match: A0A0B2NVD1_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_040285 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 1.4e-72
Identity = 133/199 (66.83%), Postives = 160/199 (80.40%), Query Frame = 1


Query: 23  QQPLLENT---LTMASKPTKTPAQKAIRKTFKGTAHLANLLPTGTVLGFQILSPIFTHQG 82
           Q+PLLEN    L +  K  KTP Q+ +RK FKGT+HLA LLPTGTVL FQ LSP+FTHQG
Sbjct: 8   QEPLLENAPTPLLLPQKTPKTPTQRTMRKAFKGTSHLAKLLPTGTVLIFQTLSPLFTHQG 67

Query: 83  HCNTHVSQTTTLGLVLLCALSCFFLLFTDSFRDERGKVRYGVATLEGLWVIDGSITLPKE 142
            C T  S+T T  L+ LC++SCF L FTDSFRDERGKVRYGVA+L+GLWV+D SI +P +
Sbjct: 68  QCQTLTSKTMTTCLLTLCSISCFLLSFTDSFRDERGKVRYGVASLKGLWVLDASIRVPVD 127

Query: 143 EAAKYRLRFIDFFHAFASLLVFIAVALFDENVVKCFYPTPSDETRELLVVLPVGIGVLCS 202
           EA KYRLRFIDFFHAF S+LVF+AVAL D +VV CF+P PS+E +ELLV LP+GIG++CS
Sbjct: 128 EAEKYRLRFIDFFHAFMSILVFLAVALLDGSVVSCFFPKPSEEAKELLVTLPIGIGIVCS 187

Query: 203 CFFIVFPSKRHGVGFPLSR 219
             F+ FPS+RHG+GFPLSR
Sbjct: 188 VLFVAFPSQRHGIGFPLSR 206

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BLAST of Lsi10G000790 vs. TrEMBL
Match: I1KEY1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_06G288800 PE=4 SV=2)

HSP 1 Score: 280.8 bits (717), Expect = 1.4e-72
Identity = 133/199 (66.83%), Postives = 160/199 (80.40%), Query Frame = 1


Query: 23  QQPLLENT---LTMASKPTKTPAQKAIRKTFKGTAHLANLLPTGTVLGFQILSPIFTHQG 82
           Q+PLLEN    L +  K  KTP Q+ +RK FKGT+HLA LLPTGTVL FQ LSP+FTHQG
Sbjct: 8   QEPLLENAPTPLLLPQKTPKTPTQRTMRKAFKGTSHLAKLLPTGTVLIFQTLSPLFTHQG 67

Query: 83  HCNTHVSQTTTLGLVLLCALSCFFLLFTDSFRDERGKVRYGVATLEGLWVIDGSITLPKE 142
            C T  S+T T  L+ LC++SCF L FTDSFRDERGKVRYGVA+L+GLWV+D SI +P +
Sbjct: 68  QCQTLTSKTMTTCLLTLCSISCFLLSFTDSFRDERGKVRYGVASLKGLWVLDASIRVPVD 127

Query: 143 EAAKYRLRFIDFFHAFASLLVFIAVALFDENVVKCFYPTPSDETRELLVVLPVGIGVLCS 202
           EA KYRLRFIDFFHAF S+LVF+AVAL D +VV CF+P PS+E +ELLV LP+GIG++CS
Sbjct: 128 EAEKYRLRFIDFFHAFMSILVFLAVALLDGSVVSCFFPKPSEEAKELLVTLPIGIGIVCS 187

Query: 203 CFFIVFPSKRHGVGFPLSR 219
             F+ FPS+RHG+GFPLSR
Sbjct: 188 VLFVAFPSQRHGIGFPLSR 206

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BLAST of Lsi10G000790 vs. TAIR10
Match: AT4G18425.1 (AT4G18425.1 Protein of unknown function (DUF679))

HSP 1 Score: 225.3 bits (573), Expect = 3.6e-59
Identity = 112/202 (55.45%), Postives = 140/202 (69.31%), Query Frame = 1


Query: 16  EGLLRKIQQPLLENTLTMASKPTKTPAQKAIRKTFKGTAHLANLLPTGTVLGFQILSPIF 75
           +G    I +PLLE           T  QKAI +TF+ TAHLANLLPTGTVL FQ+LSPIF
Sbjct: 11  KGTKEDITRPLLEEDKDFPDIERTTWIQKAIGQTFQTTAHLANLLPTGTVLAFQLLSPIF 70

Query: 76  THQGHCNTHVSQTTTLGLVLLCALSCFFLLFTDSFRDERGKVRYGVATLEGLWVIDGSIT 135
           ++ G C+  VS+  T  LV +C  SCF L FTDS++D+ G + YG+AT+ G W+IDGS T
Sbjct: 71  SNGGQCDL-VSKIMTSTLVAICGFSCFILSFTDSYKDKNGTICYGLATIHGFWIIDGSTT 130

Query: 136 LPKEEAAKYRLRFIDFFHAFASLLVFIAVALFDENVVKCFYPTPSDETRELLVVLPVGIG 195
           LP+E + +Y+LRFIDF HAF SL VF AV LFD N V CF+P+PS E  E+L  LPVG+G
Sbjct: 131 LPQELSKRYKLRFIDFVHAFMSLFVFGAVVLFDRNAVNCFFPSPSAEALEVLTALPVGVG 190

Query: 196 VLCSCFFIVFPSKRHGVGFPLS 218
           V  S  F  FP+ R+G+GFPLS
Sbjct: 191 VFSSMLFATFPTTRNGIGFPLS 211

[Close]

BLAST of Lsi10G000790 vs. TAIR10
Match: AT5G46090.1 (AT5G46090.1 Protein of unknown function (DUF679))

HSP 1 Score: 220.3 bits (560), Expect = 1.2e-57
Identity = 115/204 (56.37%), Postives = 138/204 (67.65%), Query Frame = 1


Query: 17  GLLRKIQQPLLENTLTMASKPT---KTPAQKAIRKTFKGTAHLANLLPTGTVLGFQILSP 76
           G++++   PLL++       P     T  QKAI KTF+ TA+LANLLPTGTVL FQILSP
Sbjct: 10  GIIKEETVPLLDDQNRNRDLPDIERNTMMQKAIGKTFQTTANLANLLPTGTVLAFQILSP 69

Query: 77  IFTHQGHCNTHVSQTTTLGLVLLCALSCFFLLFTDSFRDERGKVRYGVATLEGLWVIDGS 136
           I T+ G C+   S+  T  LV +C  SCF L FTDS++D  G V YG AT+ G W+IDGS
Sbjct: 70  ICTNVGRCDL-TSRFMTALLVSICGFSCFILSFTDSYKDLNGSVCYGFATIHGFWIIDGS 129

Query: 137 ITLPKEEAAKYRLRFIDFFHAFASLLVFIAVALFDENVVKCFYPTPSDETRELLVVLPVG 196
            TLP+E +  Y+LRFIDF HA  S LVF AV LFD+NVV CFYP PS E  ELL  LPV 
Sbjct: 130 ATLPQELSKSYKLRFIDFVHAIMSFLVFGAVVLFDQNVVNCFYPEPSAEVVELLTTLPVA 189

Query: 197 IGVLCSCFFIVFPSKRHGVGFPLS 218
           +GV CS  F  FP+ RHG+GFPLS
Sbjct: 190 VGVFCSMVFAKFPTTRHGIGFPLS 212

[Close]

BLAST of Lsi10G000790 vs. TAIR10
Match: AT4G24310.1 (AT4G24310.1 Protein of unknown function (DUF679))

HSP 1 Score: 176.0 bits (445), Expect = 2.5e-44
Identity = 85/183 (46.45%), Postives = 123/183 (67.21%), Query Frame = 1


Query: 39  KTPAQKAIRKTFKGTAHLANLLPTGTVLGFQILSPIFTHQGHCNTHVSQTTTLGLVLLCA 98
           +T     + +T    A+LANLLPTGT+L F +L P+FT  G C+ + +Q  T+ L+ L +
Sbjct: 28  QTSQHAVMSQTLTSAANLANLLPTGTLLAFTLLIPVFTSNGSCD-YPTQVLTIVLLTLLS 87

Query: 99  LSCFFLLFTDSFRDERGKVRYGVATLEGLWVID----GSITLPKEEAAKYRLRFIDFFHA 158
           +SCF   FTDS + E G V YG AT +G+WV D      + LP    +KYR+R ID+ HA
Sbjct: 88  ISCFLSSFTDSVKAEDGNVYYGFATRKGMWVFDYPDPDGLGLPN--LSKYRIRIIDWIHA 147

Query: 159 FASLLVFIAVALFDENVVKCFYPTPSDETRELLVVLPVGIGVLCSCFFIVFPSKRHGVGF 218
             S+LVF AVAL D+N V CFYP P  ET+++L ++P+G+GV+C   F+VFP++RHG+G+
Sbjct: 148 VLSVLVFGAVALRDKNAVSCFYPAPEQETKKVLDIVPMGVGVICGMLFLVFPARRHGIGY 207

[Close]

BLAST of Lsi10G000790 vs. TAIR10
Match: AT3G02430.1 (AT3G02430.1 Protein of unknown function (DUF679))

HSP 1 Score: 175.3 bits (443), Expect = 4.3e-44
Identity = 83/177 (46.89%), Postives = 123/177 (69.49%), Query Frame = 1


Query: 42  AQKAIRKTFKGTAHLANLLPTGTVLGFQILSPIFTHQGHCNTHVSQTTTLGLVLLCALSC 101
           +Q+A+  T    A+L+NLLPTGT+L FQ+L+P+FT  G C+ H ++  T  L+ L A SC
Sbjct: 37  SQRAMSNTLTSAANLSNLLPTGTLLAFQLLTPVFTSNGVCD-HATRFLTAVLLFLLAASC 96

Query: 102 FFLLFTDSFRDERGKVRYGVATLEGLWVID----GSITLPKEEAAKYRLRFIDFFHAFAS 161
           F   FTDS + + G + +G  T +G+WV+D      + LP  + AKYR+RF+D+ HA  S
Sbjct: 97  FVSSFTDSVKADDGTIYFGFVTFKGMWVVDYPDPSGLGLP--DLAKYRMRFVDWIHATLS 156

Query: 162 LLVFIAVALFDENVVKCFYPTPSDETRELLVVLPVGIGVLCSCFFIVFPSKRHGVGF 215
           +LVF AVAL D+ +  CFYP+P  ET+ +L ++PVG+GV+CS  F+VFP++RHG+G+
Sbjct: 157 VLVFGAVALRDKYITDCFYPSPEAETKHVLDIVPVGVGVMCSLLFMVFPARRHGIGY 210

[Close]

BLAST of Lsi10G000790 vs. TAIR10
Match: AT3G21550.1 (AT3G21550.1 DUF679 domain membrane protein 2)

HSP 1 Score: 156.0 bits (393), Expect = 2.7e-38
Identity = 83/173 (47.98%), Postives = 107/173 (61.85%), Query Frame = 1


Query: 44  KAIR-KTFKGTAHLANLLPTGTVLGFQILSPIFTHQGHCNTHVSQTTTLGLVLLCALSCF 103
           KAIR +T+ G   L  LLPTGTV  FQ L+P+ T+ GHC   +++  T  L+++CA SC 
Sbjct: 6   KAIRDRTYSGVGDLIKLLPTGTVFLFQFLNPVLTNNGHCLL-INKYLTGVLIVICAFSCC 65

Query: 104 FLLFTDSFRDERGKVRYGVATLEGLWVIDGSITLPKEEAAKYRLRFIDFFHAFASLLVFI 163
           F  FTDS+R   G V YGVAT++GLW    S+ L  +     RLR  DF HAF SL+VF 
Sbjct: 66  FTCFTDSYRTRDGYVHYGVATVKGLWPDSSSVDLSSK-----RLRVGDFVHAFFSLIVFS 125

Query: 164 AVALFDENVVKCFYPTPSDETRELLVVLPVGIGVLCSCFFIVFPSKRHGVGFP 216
            ++L D N V CFYP      +  L+VLP  IGV+    F VFPS+RHG+G P
Sbjct: 126 VISLLDANTVNCFYPGFGSAGKIFLMVLPPVIGVISGAVFTVFPSRRHGIGNP 172

[Close]

BLAST of Lsi10G000790 vs. NCBI nr
Match: gi|659111872|ref|XP_008455952.1| (PREDICTED: uncharacterized protein LOC103496014 [Cucumis melo])

HSP 1 Score: 411.8 bits (1057), Expect = 7.7e-112
Identity = 203/219 (92.69%), Postives = 207/219 (94.52%), Query Frame = 1


Query: 1   MEGEIESQIQQVAPGEGLLRKIQQPLLENTLTMASKPTKTPAQKAIRKTFKGTAHLANLL 60
           MEGEIESQIQQ  P EGLL KIQQPLLEN LTMASKPTKT AQKAIRKTFKGTAHLANLL
Sbjct: 1   MEGEIESQIQQAVPAEGLLGKIQQPLLENALTMASKPTKTSAQKAIRKTFKGTAHLANLL 60

Query: 61  PTGTVLGFQILSPIFTHQGHCNTHVSQTTTLGLVLLCALSCFFLLFTDSFRDERGKVRYG 120
           PTGTVLGFQILSPIFTHQGHCNTHVSQTTTLGLVL+CA SCFFLLFTDSFRD RGKVRYG
Sbjct: 61  PTGTVLGFQILSPIFTHQGHCNTHVSQTTTLGLVLVCAFSCFFLLFTDSFRDGRGKVRYG 120

Query: 121 VATLEGLWVIDGSITLPKEEAAKYRLRFIDFFHAFASLLVFIAVALFDENVVKCFYPTPS 180
           VAT +GLWVIDGS+TLPKEEAAKYRLRFIDFFHAFASLLVFIAVALFDENVVKC YPTPS
Sbjct: 121 VATFQGLWVIDGSVTLPKEEAAKYRLRFIDFFHAFASLLVFIAVALFDENVVKCLYPTPS 180

Query: 181 DETRELLVVLPVGIGVLCSCFFIVFPSKRHGVGFPLSRQ 220
           DE RELLVVLPVGIGVLCSC FIVFP+KRHGVGFPLSRQ
Sbjct: 181 DELRELLVVLPVGIGVLCSCLFIVFPTKRHGVGFPLSRQ 219

[Close]

BLAST of Lsi10G000790 vs. NCBI nr
Match: gi|778673369|ref|XP_011649980.1| (PREDICTED: uncharacterized protein LOC105434686 [Cucumis sativus])

HSP 1 Score: 407.5 bits (1046), Expect = 1.4e-110
Identity = 203/219 (92.69%), Postives = 205/219 (93.61%), Query Frame = 1


Query: 1   MEGEIESQIQQVAPGEGLLRKIQQPLLENTLTMASKPTKTPAQKAIRKTFKGTAHLANLL 60
           MEGEIESQIQQ  P EGLL KIQQPLLEN LTMASKPTKT AQKAIRK FKGTAHLANLL
Sbjct: 1   MEGEIESQIQQAVPTEGLLGKIQQPLLENALTMASKPTKTSAQKAIRKAFKGTAHLANLL 60

Query: 61  PTGTVLGFQILSPIFTHQGHCNTHVSQTTTLGLVLLCALSCFFLLFTDSFRDERGKVRYG 120
           PTGTVLGFQILSPIFTHQGHCNTHVSQTTTLGLVLLCALSCFFLLFTDSFRD RGKVRYG
Sbjct: 61  PTGTVLGFQILSPIFTHQGHCNTHVSQTTTLGLVLLCALSCFFLLFTDSFRDSRGKVRYG 120

Query: 121 VATLEGLWVIDGSITLPKEEAAKYRLRFIDFFHAFASLLVFIAVALFDENVVKCFYPTPS 180
           V T +GLWVIDGSITLPKEEAAKYRLRFIDFFHAF SLLVFIAVALFDENVVKCFYPTPS
Sbjct: 121 VVTFQGLWVIDGSITLPKEEAAKYRLRFIDFFHAFTSLLVFIAVALFDENVVKCFYPTPS 180

Query: 181 DETRELLVVLPVGIGVLCSCFFIVFPSKRHGVGFPLSRQ 220
           DE RELLVVLPVGIGVLCS  FIVFP+KRHGVGFPLSRQ
Sbjct: 181 DELRELLVVLPVGIGVLCSGLFIVFPTKRHGVGFPLSRQ 219

[Close]

BLAST of Lsi10G000790 vs. NCBI nr
Match: gi|703089988|ref|XP_010093959.1| (hypothetical protein L484_010525 [Morus notabilis])

HSP 1 Score: 286.2 bits (731), Expect = 4.9e-74
Identity = 141/205 (68.78%), Postives = 157/205 (76.59%), Query Frame = 1


Query: 22  IQQPLL------ENTLTMASKPTKTPAQKAIRKTFKGTAHLANLLPTGTVLGFQILSPIF 81
           IQQPLL      E     A KP KTPAQKA+RKTFKGTAHLANLLPTG+VL FQILSP F
Sbjct: 21  IQQPLLAGKNNVEAVSAAAEKPAKTPAQKAMRKTFKGTAHLANLLPTGSVLAFQILSPAF 80

Query: 82  THQGHCNTHVSQTTTLGLVLLCALSCFFLLFTDSFRDERGKVRYGVATLEGLWVIDGS-- 141
           THQG C + VSQ TT GL+  CA SCF L FTDSFRD RGKVRYGVAT  GLW++DGS  
Sbjct: 81  THQGQCRSRVSQATTFGLLACCAASCFLLCFTDSFRDARGKVRYGVATFRGLWIVDGSAG 140

Query: 142 ITLPKEEAAKYRLRFIDFFHAFASLLVFIAVALFDENVVKCFYPTPSDETRELLVVLPVG 201
             +  EEA  YRL  IDFFHA ASLLVF AV  FDENVV+CF P PS+E +ELLV +PVG
Sbjct: 141 AVIAAEEAENYRLMVIDFFHALASLLVFAAVVAFDENVVRCFCPAPSEEVKELLVAVPVG 200

Query: 202 IGVLCSCFFIVFPSKRHGVGFPLSR 219
           +GVLCS FF+ FP++RHG+GFPLSR
Sbjct: 201 VGVLCSLFFVAFPTRRHGIGFPLSR 225

[Close]

BLAST of Lsi10G000790 vs. NCBI nr
Match: gi|567908785|ref|XP_006446706.1| (hypothetical protein CICLE_v10017623mg [Citrus clementina])

HSP 1 Score: 284.6 bits (727), Expect = 1.4e-73
Identity = 139/201 (69.15%), Postives = 163/201 (81.09%), Query Frame = 1


Query: 19  LRKIQQ-PLLENTLTMASKPTKTPAQKAIRKTFKGTAHLANLLPTGTVLGFQILSPIFTH 78
           LR+ QQ PLLEN    A K  KTPAQKAIRKTFKGTAHLA LLPTG+VL FQILSPI TH
Sbjct: 7   LRQQQQLPLLEN----APKAQKTPAQKAIRKTFKGTAHLARLLPTGSVLTFQILSPILTH 66

Query: 79  QGHCNTHVSQTTTLGLVLLCALSCFFLLFTDSFRDERGKVRYGVATLEGLWVIDGSITLP 138
           QG C TH S+  TLGL+ LC +SCF L  TDSFRDERGKVRYG+AT  GLWVID S+ L 
Sbjct: 67  QGRCPTHASRVITLGLLALCGVSCFILRLTDSFRDERGKVRYGLATFRGLWVIDTSLKLA 126

Query: 139 KEEAAKYRLRFIDFFHAFASLLVFIAVALFDENVVKCFYPTPSDETRELLVVLPVGIGVL 198
            EE A+Y+L+FID FHAFAS+LVF  +ALFD+NVV CF+PTPS+ET+ELL+ +P+GIG+ 
Sbjct: 127 PEEKAQYQLKFIDLFHAFASILVFATIALFDKNVVNCFFPTPSEETKELLIRVPIGIGIA 186

Query: 199 CSCFFIVFPSKRHGVGFPLSR 219
           CS  F++FPSKRHG+G PLS+
Sbjct: 187 CSILFVLFPSKRHGIGCPLSK 203

[Close]

BLAST of Lsi10G000790 vs. NCBI nr
Match: gi|747104041|ref|XP_011100240.1| (PREDICTED: uncharacterized protein LOC105178468 [Sesamum indicum])

HSP 1 Score: 283.1 bits (723), Expect = 4.1e-73
Identity = 138/206 (66.99%), Postives = 166/206 (80.58%), Query Frame = 1


Query: 14  PGEGLLRKIQQPLLENTLTMA-SKPTKTPAQKAIRKTFKGTAHLANLLPTGTVLGFQILS 73
           P EG    IQ PLLEN    A +KP KT A+K +RK FKGTAHL+NLLPTG+VL FQ+LS
Sbjct: 20  PDEG----IQVPLLENQPPPAGAKPPKTRARKVVRKAFKGTAHLSNLLPTGSVLAFQVLS 79

Query: 74  PIFTHQGHCNTHVSQTTTLGLVLLCALSCFFLLFTDSFRDERGKVRYGVATLEGLWVIDG 133
           P+FTH+G C + VS++TTLGL+  CA SCFFL FTDSFRDERGKVRYG+AT  GLWVIDG
Sbjct: 80  PVFTHEGKCKSIVSRSTTLGLLGFCAASCFFLCFTDSFRDERGKVRYGLATFRGLWVIDG 139

Query: 134 -SITLPKEEAAKYRLRFIDFFHAFASLLVFIAVALFDENVVKCFYPTPSDETRELLVVLP 193
            S  LP +EA K+RLRF+DFFHA  S++VF AVA+ D+NV+ CFYP+PSDET E+L  LP
Sbjct: 140 SSCALPPQEAEKFRLRFVDFFHALLSIVVFAAVAMLDKNVMHCFYPSPSDETLEILTTLP 199

Query: 194 VGIGVLCSCFFIVFPSKRHGVGFPLS 218
           V +GV+CS FF++FP+KRHGVGFPLS
Sbjct: 200 VAVGVICSLFFLLFPTKRHGVGFPLS 221

The following BLAST results are available for this feature:

BLAST of Lsi10G000790 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi10G000790 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LT42_CUCSA	1.0e-110	92.69	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G408960 PE=4 SV=1	[more]
W9R5J4_9ROSA	3.4e-74	68.78	Uncharacterized protein OS=Morus notabilis GN=L484_010525 PE=4 SV=1	[more]
V4UCF7_9ROSI	9.9e-74	69.15	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017623mg PE=4 SV=1	[more]
A0A0B2NVD1_GLYSO	1.4e-72	66.83	Uncharacterized protein OS=Glycine soja GN=glysoja_040285 PE=4 SV=1	[more]
I1KEY1_SOYBN	1.4e-72	66.83	Uncharacterized protein OS=Glycine max GN=GLYMA_06G288800 PE=4 SV=2	[more]

BLAST of Lsi10G000790 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G18425.1	3.6e-59	55.45	Protein of unknown function (DUF679)	[more]
AT5G46090.1	1.2e-57	56.37	Protein of unknown function (DUF679)	[more]
AT4G24310.1	2.5e-44	46.45	Protein of unknown function (DUF679)	[more]
AT3G02430.1	4.3e-44	46.89	Protein of unknown function (DUF679)	[more]
AT3G21550.1	2.7e-38	47.98	DUF679 domain membrane protein 2	[more]

BLAST of Lsi10G000790 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659111872\|ref\|XP_008455952.1\|	7.7e-112	92.69	PREDICTED: uncharacterized protein LOC103496014 [Cucumis melo]	[more]
gi\|778673369\|ref\|XP_011649980.1\|	1.4e-110	92.69	PREDICTED: uncharacterized protein LOC105434686 [Cucumis sativus]	[more]
gi\|703089988\|ref\|XP_010093959.1\|	4.9e-74	68.78	hypothetical protein L484_010525 [Morus notabilis]	[more]
gi\|567908785\|ref\|XP_006446706.1\|	1.4e-73	69.15	hypothetical protein CICLE_v10017623mg [Citrus clementina]	[more]
gi\|747104041\|ref\|XP_011100240.1\|	4.1e-73	66.99	PREDICTED: uncharacterized protein LOC105178468 [Sesamum indicum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007770	DMP

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi10G000790.1	Lsi10G000790.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007770	Protein of unknown function DUF679	PFAM	PF05078	DUF679	coord: 52..214 score: 1.7
None	No IPR available	PANTHER	PTHR31621	FAMILY NOT NAMED	coord: 2..219 score: 5.4E
None	No IPR available	PANTHER	PTHR31621:SF0	DUF679 DOMAIN MEMBRANE PROTEIN 7	coord: 2..219 score: 5.4E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi10G000790	Csa2G408960	Cucumber (Chinese Long) v2	culsiB094
Lsi10G000790	CSPI02G25920	Wild cucumber (PI 183967)	cpilsiB092
Lsi10G000790	Cucsa.087490	Cucumber (Gy14) v1	cgylsiB096
Lsi10G000790	CmaCh20G005730	Cucurbita maxima (Rimu)	cmalsiB501
Lsi10G000790	CmaCh02G002000	Cucurbita maxima (Rimu)	cmalsiB549
Lsi10G000790	CmoCh20G006570	Cucurbita moschata (Rifu)	cmolsiB493
Lsi10G000790	CmoCh02G002050	Cucurbita moschata (Rifu)	cmolsiB534
Lsi10G000790	Cla003733	Watermelon (97103) v1	lsiwmB077
Lsi10G000790	MELO3C019333	Melon (DHL92) v3.5.1	lsimeB053
Lsi10G000790	MELO3C007258.2	Melon (DHL92) v3.6.1	lsimedB082
Lsi10G000790	MELO3C019333.2	Melon (DHL92) v3.6.1	lsimedB054
Lsi10G000790	Cla97C02G036040	Watermelon (97103) v2	lsiwmbB046
Lsi10G000790	Bhi03G000288	Wax gourd	lsiwgoB088
Lsi10G000790	Bhi10G001059	Wax gourd	lsiwgoB069
Lsi10G000790	Cp4.1LG16g04090	Cucurbita pepo (Zucchini)	cpelsiB221
Lsi10G000790	CsGy2G025540	Cucumber (Gy14) v2	cgyblsiB087
Lsi10G000790	Carg05128	Silver-seed gourd	carlsiB739
Lsi10G000790	Carg03106	Silver-seed gourd	carlsiB304
Lsi10G000790	CsaV3_2G034450	Cucumber (Chinese Long) v3	cuclsiB105
Lsi10G000790	CsaV3_6G050420	Cucumber (Chinese Long) v3	cuclsiB436

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi10G000790	Cucumber (Chinese Long) v3	cuclsiB521
Lsi10G000790	Watermelon (97103) v2	lsiwmbB055
Lsi10G000790	Wax gourd	lsiwgoB064
Lsi10G000790	Bottle gourd (USVL1VR-Ls)	lsilsiB022
Lsi10G000790	Cucurbita maxima (Rimu)	cmalsiB084
Lsi10G000790	Cucurbita moschata (Rifu)	cmolsiB074
Lsi10G000790	Cucurbita pepo (Zucchini)	cpelsiB194
Lsi10G000790	Cucurbita pepo (Zucchini)	cpelsiB520
Lsi10G000790	Cucurbita pepo (Zucchini)	cpelsiB590
Lsi10G000790	Wild cucumber (PI 183967)	cpilsiB498
Lsi10G000790	Cucumber (Chinese Long) v2	culsiB488
Lsi10G000790	Melon (DHL92) v3.5.1	lsimeB067
Lsi10G000790	Watermelon (Charleston Gray)	lsiwcgB058
Lsi10G000790	Watermelon (97103) v1	lsiwmB080
Lsi10G000790	Cucumber (Gy14) v2	cgyblsiB455
Lsi10G000790	Melon (DHL92) v3.6.1	lsimedB067
Lsi10G000790	Silver-seed gourd	carlsiB173
Lsi10G000790	Silver-seed gourd	carlsiB972