Lsi09G019340 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi09G019340
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Xyloglucan endotransglucosylase/hydrolase protein 27
Location	chr09 : 28141131 .. 28141559 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCCGATGCCCCGCCGGGAACACCTCCGGCCTCAATTTCAACCTCTACCTGTCGTCCATGGAAGGAGAGAAAGGGCAAGACGAAATCGACTTCGAATTCCTGGGAAAGGACCGAAGCATCGTTCAGACGAATTTGTACACCGGGGGGGCCGGGAACAGAGAGCGAATCCACGAGCTTGGGTTCGATTGCGGAGATGGGTTCCATAAGTATTCGGTGAAATGGGGGCCGGATTTGGTCGAGTGGGAGATCGAGGGGAAGGTGGTGCGACGGGAGGAGGAGGATATTCCGAGGAAGGCGATGTTTTTGTATGCGTCGATGTGGGATGCTAGTAATATAGATGAAGGGAGGTGGGCAGGGAAGTATGTGGGATGTAATCAGCCATATGTTTGTGTTTATAAGGACGTTCAGGTTCCTCACCCTCATTAA

mRNA sequence

ATGATCCGATGCCCCGCCGGGAACACCTCCGGCCTCAATTTCAACCTCTACCTGTCGTCCATGGAAGGAGAGAAAGGGCAAGACGAAATCGACTTCGAATTCCTGGGAAAGGACCGAAGCATCGTTCAGACGAATTTGTACACCGGGGGGGCCGGGAACAGAGAGCGAATCCACGAGCTTGGGTTCGATTGCGGAGATGGGTTCCATAAGTATTCGGTGAAATGGGGGCCGGATTTGGTCGAGTGGGAGATCGAGGGGAAGGTGGTGCGACGGGAGGAGGAGGATATTCCGAGGAAGGCGATGTTTTTGTATGCGTCGATGTGGGATGCTAGTAATATAGATGAAGGGAGGTGGGCAGGGAAGTATGTGGGATGTAATCAGCCATATGTTTGTGTTTATAAGGACGTTCAGGTTCCTCACCCTCATTAA

Coding sequence (CDS)

ATGATCCGATGCCCCGCCGGGAACACCTCCGGCCTCAATTTCAACCTCTACCTGTCGTCCATGGAAGGAGAGAAAGGGCAAGACGAAATCGACTTCGAATTCCTGGGAAAGGACCGAAGCATCGTTCAGACGAATTTGTACACCGGGGGGGCCGGGAACAGAGAGCGAATCCACGAGCTTGGGTTCGATTGCGGAGATGGGTTCCATAAGTATTCGGTGAAATGGGGGCCGGATTTGGTCGAGTGGGAGATCGAGGGGAAGGTGGTGCGACGGGAGGAGGAGGATATTCCGAGGAAGGCGATGTTTTTGTATGCGTCGATGTGGGATGCTAGTAATATAGATGAAGGGAGGTGGGCAGGGAAGTATGTGGGATGTAATCAGCCATATGTTTGTGTTTATAAGGACGTTCAGGTTCCTCACCCTCATTAA

Protein sequence

MIRCPAGNTSGLNFNLYLSSMEGEKGQDEIDFEFLGKDRSIVQTNLYTGGAGNRERIHELGFDCGDGFHKYSVKWGPDLVEWEIEGKVVRREEEDIPRKAMFLYASMWDASNIDEGRWAGKYVGCNQPYVCVYKDVQVPHPH

Homology

[Close]

BLAST of Lsi09G019340 vs. Swiss-Prot
Match: GUB_BACSU (Beta-glucanase OS=Bacillus subtilis (strain 168) GN=bglS PE=1 SV=2)

HSP 1 Score: 99.8 bits (247), Expect = 2.6e-20
Identity = 49/126 (38.89%), Postives = 71/126 (56.35%), Query Frame = 1


Query: 5   PAGNTSGLN-FNLYLSSMEGEKGQDEIDFEFLGKDRSIVQTNLYTGGAGNRERIHELGFD 64
           PA NT  ++ F  Y    +G    DEID EFLGKD + VQ N YT GAGN E+I +LGFD
Sbjct: 109 PAKNTGIVSSFFTYTGPTDGTPW-DEIDIEFLGKDTTKVQFNYYTNGAGNHEKIVDLGFD 168

Query: 65  CGDGFHKYSVKWGPDLVEWEIEGKVVRREEEDIPRKAMFLYASMWDASNIDEGRWAGKYV 124
             + +H Y+  W P+ ++W ++G++       IP     +  ++W+ + +DE  W G Y 
Sbjct: 169 AANAYHTYAFDWQPNSIKWYVDGQLKHTATNQIPTTPGKIMMNLWNGTGVDE--WLGSYN 228

Query: 125 GCNQPY 130
           G N  Y
Sbjct: 229 GVNPLY 231

[Close]

BLAST of Lsi09G019340 vs. Swiss-Prot
Match: GUB_BACAM (Beta-glucanase OS=Bacillus amyloliquefaciens GN=bglA PE=3 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 7.6e-20
Identity = 48/126 (38.10%), Postives = 70/126 (55.56%), Query Frame = 1


Query: 5   PAGNTSGLN-FNLYLSSMEGEKGQDEIDFEFLGKDRSIVQTNLYTGGAGNRERIHELGFD 64
           PA NT  ++ F  Y    EG    DEID EFLGKD + VQ N YT GAGN E+  +LGFD
Sbjct: 106 PAKNTGIVSSFFTYTGPTEGTPW-DEIDIEFLGKDTTKVQFNYYTNGAGNHEKFADLGFD 165

Query: 65  CGDGFHKYSVKWGPDLVEWEIEGKVVRREEEDIPRKAMFLYASMWDASNIDEGRWAGKYV 124
             + +H Y+  W P+ ++W ++G++       IP     +  ++W+ + +D+  W G Y 
Sbjct: 166 AANAYHTYAFDWQPNSIKWYVDGQLKHTATTQIPAAPGKIMMNLWNGTGVDD--WLGSYN 225

Query: 125 GCNQPY 130
           G N  Y
Sbjct: 226 GVNPIY 228

[Close]

BLAST of Lsi09G019340 vs. Swiss-Prot
Match: GUB_PAEMA (Beta-glucanase OS=Paenibacillus macerans PE=1 SV=2)

HSP 1 Score: 95.1 bits (235), Expect = 6.5e-19
Identity = 47/126 (37.30%), Postives = 67/126 (53.17%), Query Frame = 1


Query: 5   PAGNTSGLN-FNLYLSSMEGEKGQDEIDFEFLGKDRSIVQTNLYTGGAGNRERIHELGFD 64
           PA NT  ++ F  Y     G +  DEID EFLGKD + VQ N YT G G  E++  LGFD
Sbjct: 104 PAKNTGIVSSFFTYTGPAHGTQW-DEIDIEFLGKDTTKVQFNYYTNGVGGHEKVISLGFD 163

Query: 65  CGDGFHKYSVKWGPDLVEWEIEGKVVRREEEDIPRKAMFLYASMWDASNIDEGRWAGKYV 124
              GFH Y+  W P  ++W ++G +      +IP     +  ++W+ + +D+  W G Y 
Sbjct: 164 ASKGFHTYAFDWQPGYIKWYVDGVLKHTATANIPSTPGKIMMNLWNGTGVDD--WLGSYN 223

Query: 125 GCNQPY 130
           G N  Y
Sbjct: 224 GANPLY 226

[Close]

BLAST of Lsi09G019340 vs. Swiss-Prot
Match: GUB_BACLI (Beta-glucanase OS=Bacillus licheniformis GN=bg1 PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 3.2e-18
Identity = 39/97 (40.21%), Postives = 58/97 (59.79%), Query Frame = 1


Query: 28  DEIDFEFLGKDRSIVQTNLYTGGAGNRERIHELGFDCGDGFHKYSVKWGPDLVEWEIEGK 87
           DEID EFLGKD + VQ N YT G GN E+I  LGFD  + +H Y+  W P+ ++W ++G+
Sbjct: 133 DEIDIEFLGKDTTKVQFNYYTNGVGNHEKIVNLGFDAANSYHTYAFDWQPNSIKWYVDGQ 192

Query: 88  VVRREEEDIPRKAMFLYASMWDASNIDEGRWAGKYVG 125
           +       IP+    +  ++W+ + +DE  W G Y G
Sbjct: 193 LKHTATTQIPQTPGKIMMNLWNGAGVDE--WLGSYNG 227

[Close]

BLAST of Lsi09G019340 vs. Swiss-Prot
Match: GUB_PAEPO (Beta-glucanase OS=Paenibacillus polymyxa GN=gluB PE=3 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 4.2e-18
Identity = 47/126 (37.30%), Postives = 65/126 (51.59%), Query Frame = 1


Query: 5   PAGNTSGLN-FNLYLSSMEGEKGQDEIDFEFLGKDRSIVQTNLYTGGAGNRERIHELGFD 64
           PA NT  ++ F  Y     G +  DEID EFLGKD + VQ N YT G G  E+I  LGFD
Sbjct: 105 PAKNTGIVSSFFTYTGPSHGTQW-DEIDIEFLGKDTTKVQFNYYTNGVGGHEKIINLGFD 164

Query: 65  CGDGFHKYSVKWGPDLVEWEIEGKVVRREEEDIPRKAMFLYASMWDASNIDEGRWAGKYV 124
               FH Y+  W P  ++W ++G +      +IP     +  ++W+ + +D   W G Y 
Sbjct: 165 ASTSFHTYAFDWQPGYIKWYVDGVLKHTATTNIPSTPGKIMMNLWNGTGVDS--WLGSYN 224

Query: 125 GCNQPY 130
           G N  Y
Sbjct: 225 GANPLY 227

[Close]

BLAST of Lsi09G019340 vs. TrEMBL
Match: W9RDT3_9ROSA (Putative xyloglucan endotransglucosylase/hydrolase protein 27 OS=Morus notabilis GN=L484_024626 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 4.3e-62
Identity = 106/142 (74.65%), Postives = 122/142 (85.92%), Query Frame = 1


Query: 2   IRCPAGNTSGLNFNLYLSSMEGEKGQDEIDFEFLGKDRSIVQTNLYTGGAGNRERIHELG 61
           I+CP GNTSGLNFN+YLSS+EG+K QDEIDFEFLGKDR++VQTN+YT G GNRE+IH LG
Sbjct: 65  IKCPGGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGKDRTVVQTNVYTSGTGNREQIHNLG 124

Query: 62  FDCGDGFHKYSVKWGPDLVEWEIEGKVVRREE----EDIPRKAMFLYASMWDASNIDEGR 121
           FDC DGFH+Y +KWGPDL+EW I+GKVVRREE    E  P K MFLYAS+WDAS IDEGR
Sbjct: 125 FDCSDGFHEYVIKWGPDLIEWLIDGKVVRREERREGEGFPEKPMFLYASVWDASYIDEGR 184

Query: 122 WAGKYVGCNQPYVCVYKDVQVP 140
           W GKYVGC+ PYVC+YKD+ VP
Sbjct: 185 WTGKYVGCDAPYVCLYKDIHVP 206

[Close]

BLAST of Lsi09G019340 vs. TrEMBL
Match: A0A067H1W4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028023mg PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 1.7e-58
Identity = 100/143 (69.93%), Postives = 120/143 (83.92%), Query Frame = 1


Query: 1   MIRCPAGNTSGLNFNLYLSSMEGEKGQDEIDFEFLGKDRSIVQTNLYTGGAGNRERIHEL 60
           +I+CP GNTSGLNFN+YLSS+EG+K QDEIDFEFLGKD++IVQTN YT G GNRE IH+L
Sbjct: 62  LIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGKDKTIVQTNYYTTGTGNREEIHDL 121

Query: 61  GFDCGDGFHKYSVKWGPDLVEWEIEGKVVRREE----EDIPRKAMFLYASMWDASNIDEG 120
           GFDC +GFH+Y +KWGPDL++W I+GKVVRR E    E  P K MFLYAS+WDAS+ID+ 
Sbjct: 122 GFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEGEGFPNKPMFLYASVWDASHIDKA 181

Query: 121 RWAGKYVGCNQPYVCVYKDVQVP 140
           RW G YVGC+ PYVC+YKD+ VP
Sbjct: 182 RWCGPYVGCDAPYVCLYKDIHVP 204

[Close]

BLAST of Lsi09G019340 vs. TrEMBL
Match: V4U876_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022200mg PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 1.7e-58
Identity = 100/143 (69.93%), Postives = 120/143 (83.92%), Query Frame = 1


Query: 1   MIRCPAGNTSGLNFNLYLSSMEGEKGQDEIDFEFLGKDRSIVQTNLYTGGAGNRERIHEL 60
           +I+CP GNTSGLNFN+YLSS+EG+K QDEIDFEFLGKD++IVQTN YT G GNRE IH+L
Sbjct: 62  LIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGKDKTIVQTNYYTTGTGNREEIHDL 121

Query: 61  GFDCGDGFHKYSVKWGPDLVEWEIEGKVVRREE----EDIPRKAMFLYASMWDASNIDEG 120
           GFDC +GFH+Y +KWGPDL++W I+GKVVRR E    E  P K MFLYAS+WDAS+ID+ 
Sbjct: 122 GFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEGEGFPNKPMFLYASVWDASHIDKA 181

Query: 121 RWAGKYVGCNQPYVCVYKDVQVP 140
           RW G YVGC+ PYVC+YKD+ VP
Sbjct: 182 RWCGPYVGCDAPYVCLYKDIHVP 204

[Close]

BLAST of Lsi09G019340 vs. TrEMBL
Match: A0A0B0P6I9_GOSAR (Putative xyloglucan endotransglucosylase/hydrolase 21-like protein OS=Gossypium arboreum GN=F383_28264 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 3.8e-58
Identity = 99/143 (69.23%), Postives = 121/143 (84.62%), Query Frame = 1


Query: 1   MIRCPAGNTSGLNFNLYLSSMEGEKGQDEIDFEFLGKDRSIVQTNLYTGGAGNRERIHEL 60
           +I+CP GNTSGLNFN+YLSS+EG+K QDEIDFEFLGKD++IVQTN YT G GNRE+IH+L
Sbjct: 62  LIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGKDKTIVQTNYYTTGTGNREQIHDL 121

Query: 61  GFDCGDGFHKYSVKWGPDLVEWEIEGKVVRREE----EDIPRKAMFLYASMWDASNIDEG 120
           GFDC DGFH+Y++KW PD +EW I+GKVVR+ E    E +P K MFLYAS+WDAS I EG
Sbjct: 122 GFDCSDGFHEYTIKWNPDSIEWVIDGKVVRKAEKKEGEAVPEKPMFLYASVWDASYIAEG 181

Query: 121 RWAGKYVGCNQPYVCVYKDVQVP 140
           +W G Y+GC+ PYVC+YKD+QVP
Sbjct: 182 QWTGPYIGCDVPYVCLYKDIQVP 204

[Close]

BLAST of Lsi09G019340 vs. TrEMBL
Match: F6I323_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g01850 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 4.9e-58
Identity = 100/143 (69.93%), Postives = 119/143 (83.22%), Query Frame = 1


Query: 1   MIRCPAGNTSGLNFNLYLSSMEGEKGQDEIDFEFLGKDRSIVQTNLYTGGAGNRERIHEL 60
           +I+CP GNTSGLNFN+YLSS+EG+K QDEIDFEFLGKD+ IVQTN YT G GNRE IH+L
Sbjct: 60  LIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGKDKRIVQTNYYTAGTGNREAIHDL 119

Query: 61  GFDCGDGFHKYSVKWGPDLVEWEIEGK----VVRREEEDIPRKAMFLYASMWDASNIDEG 120
           GFDC DGFH+Y +KWGPDL++W I+GK    VVR + E  P+K MFLYAS+WDAS IDEG
Sbjct: 120 GFDCSDGFHEYVIKWGPDLIQWLIDGKVIRSVVRADGEGFPQKPMFLYASVWDASYIDEG 179

Query: 121 RWAGKYVGCNQPYVCVYKDVQVP 140
           RW G YVGC+ PY+C+YK+V VP
Sbjct: 180 RWTGPYVGCDAPYICLYKNVNVP 202

[Close]

BLAST of Lsi09G019340 vs. TAIR10
Match: AT2G06850.1 (AT2G06850.1 xyloglucan endotransglucosylase/hydrolase 4)

HSP 1 Score: 86.7 bits (213), Expect = 1.3e-17
Identity = 53/153 (34.64%), Postives = 82/153 (53.59%), Query Frame = 1


Query: 2   IRCPAGNTSGLNFNLYLSSMEGEKGQDEIDFEFLGK---DRSIVQTNLYTGGAGNRERIH 61
           I+ PAG+T+G+    YLSS   E   DEIDFEFLG      +I+QTN++TGG GNRE+  
Sbjct: 84  IKLPAGDTAGVVTAFYLSSTNNE--HDEIDFEFLGNRTGQPAILQTNVFTGGKGNREQRI 143

Query: 62  ELGFDCGDGFHKYSVKWGPDLVEWEIEGKVVR--REEEDIP-----RKAMFLYASMWDAS 121
            L FD    +H YS+ W    + + ++   +R  +  +D+       + M LY+S+W+A 
Sbjct: 144 YLWFDPSKAYHTYSILWNMYQIVFFVDNIPIRTFKNAKDLGVRFPFNQPMKLYSSLWNAD 203

Query: 122 N------IDEGRWAGKYVGCNQPYVCVYKDVQV 139
           +      +++  WA      N P+V  YK   +
Sbjct: 204 DWATRGGLEKTNWA------NAPFVASYKGFHI 228

[Close]

BLAST of Lsi09G019340 vs. TAIR10
Match: AT1G14720.1 (AT1G14720.1 xyloglucan endotransglucosylase/hydrolase 28)

HSP 1 Score: 80.5 bits (197), Expect = 9.3e-16
Identity = 55/153 (35.95%), Postives = 81/153 (52.94%), Query Frame = 1


Query: 2   IRCPAGNTSGLNFNLYLSSME-GEKGQDEIDFEFLGKDRS---IVQTNLYTGGAGN--RE 61
           I+ PA  ++G+    YLS+ +  EK  DEIDFEFLG  R     +QTN+Y  G+ +  RE
Sbjct: 80  IKLPADYSAGVVIAFYLSNGDLYEKNHDEIDFEFLGNIRGREWRIQTNIYGNGSTHLGRE 139

Query: 62  RIHELGFDCGDGFHKYSVKWGPDLVEWEIEGKVVRREEE------DIPRKAMFLYASMWD 121
             + L FD  + FH+YS+ W    + + ++   +R  +       D P K M LY+++WD
Sbjct: 140 ERYNLWFDPTEDFHQYSILWSLSHIIFYVDNVPIREVKRTASMGGDFPAKPMSLYSTIWD 199

Query: 122 ASNIDEGRWA---GKYVGCN---QPYVCVYKDV 137
            S     +WA   GKY G N    PYV  + D+
Sbjct: 200 GS-----KWATDGGKY-GVNYKYAPYVSQFTDL 226

[Close]

BLAST of Lsi09G019340 vs. TAIR10
Match: AT5G13870.1 (AT5G13870.1 xyloglucan endotransglucosylase/hydrolase 5)

HSP 1 Score: 79.3 bits (194), Expect = 2.1e-15
Identity = 51/147 (34.69%), Postives = 75/147 (51.02%), Query Frame = 1


Query: 2   IRCPAGNTSGLNFNLYLSSMEGEKGQDEIDFEFLGKDRS---IVQTNLYTGGAGNRERIH 61
           I+  AG+++G     YLSS   E   DEIDFEFLG       I+QTN++TGGAGNRE+  
Sbjct: 81  IKMVAGDSAGTVTAFYLSSQNSE--HDEIDFEFLGNRTGQPYILQTNVFTGGAGNREQRI 140

Query: 62  ELGFDCGDGFHKYSVKWGPDLVEWEIEGKVVR--REEEDIPRKAMF-----LYASMWDAS 121
            L FD    +H YSV W    + + ++   +R  +  +D+  K  F     +Y+S+W+A 
Sbjct: 141 NLWFDPSKDYHSYSVLWNMYQIVFFVDDVPIRVFKNSKDVGVKFPFNQPMKIYSSLWNAD 200

Query: 122 NIDEGRWAGKYVGCNQPYVCVYKDVQV 139
           +        K      P+V  Y+   V
Sbjct: 201 DWATRGGLEKTNWEKAPFVASYRGFHV 225

[Close]

BLAST of Lsi09G019340 vs. TAIR10
Match: AT2G01850.1 (AT2G01850.1 endoxyloglucan transferase A3)

HSP 1 Score: 77.8 bits (190), Expect = 6.0e-15
Identity = 55/153 (35.95%), Postives = 80/153 (52.29%), Query Frame = 1


Query: 2   IRCPAGNTSGLNFNLYLSSMEG-EKGQDEIDFEFLGKDRS---IVQTNLYTGGA--GNRE 61
           I+ P+  T+G+    Y+S+ +  EK  DEIDFEFLG  R     VQTN+Y  G+    RE
Sbjct: 80  IKLPSDYTAGVVVAFYMSNGDMYEKNHDEIDFEFLGNIREKEWRVQTNIYGNGSTHSGRE 139

Query: 62  RIHELGFDCGDGFHKYSVKWGPDLVEWEIEG---KVVRREEE---DIPRKAMFLYASMWD 121
             + L FD  + FH+YS+ W    + + ++    + V+R  E     P K M LY ++WD
Sbjct: 140 ERYNLWFDPTEDFHQYSILWSDSHIIFFVDNVPIREVKRTAEMGGHFPSKPMSLYTTIWD 199

Query: 122 ASNIDEGRWA---GKYVGCN---QPYVCVYKDV 137
            S     +WA   GKY G N    PY+  + D+
Sbjct: 200 GS-----KWATNGGKY-GVNYKYAPYIARFSDL 226

[Close]

BLAST of Lsi09G019340 vs. TAIR10
Match: AT4G18990.1 (AT4G18990.1 xyloglucan endotransglucosylase/hydrolase 29)

HSP 1 Score: 77.8 bits (190), Expect = 6.0e-15
Identity = 52/150 (34.67%), Postives = 79/150 (52.67%), Query Frame = 1


Query: 1   MIRCPAGNTSGLNFNLYLSSMEG-EKGQDEIDFEFLGKDRSI---VQTNLYTGGAGNR-- 60
           +I+ P   T+G+    Y S+ +   K  DE+D EFLG         QTN+Y  G+ NR  
Sbjct: 88  LIKLPGAYTAGIVVAFYTSNGDVFVKDHDELDIEFLGNLEGKPWRFQTNMYGNGSTNRGR 147

Query: 61  ERIHELGFDCGDGFHKYSVKWGPDLVEWEIEGKVVR---REEE---DIPRKAMFLYASMW 120
           E  + L FD    FH+YS+ W P  + + ++   +R   R+EE   D P+K M LYA++W
Sbjct: 148 EERYRLWFDPSKEFHRYSILWTPTKIIFWVDDVPIREILRKEEMNGDYPQKPMSLYATIW 207

Query: 121 DASN--IDEGRWAGKYVGCNQPYVCVYKDV 137
           DAS+     G++   Y     P+V  +KD+
Sbjct: 208 DASSWATSGGKFGVDYT--FSPFVSEFKDI 235

[Close]

BLAST of Lsi09G019340 vs. NCBI nr
Match: gi|703085415|ref|XP_010092731.1| (putative xyloglucan endotransglucosylase/hydrolase protein 27 [Morus notabilis])

HSP 1 Score: 245.4 bits (625), Expect = 6.2e-62
Identity = 106/142 (74.65%), Postives = 122/142 (85.92%), Query Frame = 1


Query: 2   IRCPAGNTSGLNFNLYLSSMEGEKGQDEIDFEFLGKDRSIVQTNLYTGGAGNRERIHELG 61
           I+CP GNTSGLNFN+YLSS+EG+K QDEIDFEFLGKDR++VQTN+YT G GNRE+IH LG
Sbjct: 65  IKCPGGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGKDRTVVQTNVYTSGTGNREQIHNLG 124

Query: 62  FDCGDGFHKYSVKWGPDLVEWEIEGKVVRREE----EDIPRKAMFLYASMWDASNIDEGR 121
           FDC DGFH+Y +KWGPDL+EW I+GKVVRREE    E  P K MFLYAS+WDAS IDEGR
Sbjct: 125 FDCSDGFHEYVIKWGPDLIEWLIDGKVVRREERREGEGFPEKPMFLYASVWDASYIDEGR 184

Query: 122 WAGKYVGCNQPYVCVYKDVQVP 140
           W GKYVGC+ PYVC+YKD+ VP
Sbjct: 185 WTGKYVGCDAPYVCLYKDIHVP 206

[Close]

BLAST of Lsi09G019340 vs. NCBI nr
Match: gi|1009163867|ref|XP_015900194.1| (PREDICTED: beta-glucanase-like [Ziziphus jujuba])

HSP 1 Score: 239.2 bits (609), Expect = 4.4e-60
Identity = 104/143 (72.73%), Postives = 122/143 (85.31%), Query Frame = 1


Query: 1   MIRCPAGNTSGLNFNLYLSSMEGEKGQDEIDFEFLGKDRSIVQTNLYTGGAGNRERIHEL 60
           +I+CP GNTSGLNFN+YLSSMEG+K QDEIDFEFLG+DR++VQTN YT G GNRE+IH+L
Sbjct: 110 LIQCPKGNTSGLNFNIYLSSMEGDKSQDEIDFEFLGRDRNLVQTNYYTTGTGNREQIHDL 169

Query: 61  GFDCGDGFHKYSVKWGPDLVEWEIEGKVVRREE----EDIPRKAMFLYASMWDASNIDEG 120
           GFDC DGFH+Y +KWGPDL+EW I+GKVVR+EE    E  P K M+LYAS+WDAS IDEG
Sbjct: 170 GFDCSDGFHRYVIKWGPDLIEWLIDGKVVRKEEKREGEWFPEKPMYLYASIWDASYIDEG 229

Query: 121 RWAGKYVGCNQPYVCVYKDVQVP 140
           RW GKY GC+ PYVC+YKDV VP
Sbjct: 230 RWTGKYEGCDAPYVCLYKDVHVP 252

[Close]

BLAST of Lsi09G019340 vs. NCBI nr
Match: gi|567905346|ref|XP_006445161.1| (hypothetical protein CICLE_v10022200mg [Citrus clementina])

HSP 1 Score: 233.4 bits (594), Expect = 2.4e-58
Identity = 100/143 (69.93%), Postives = 120/143 (83.92%), Query Frame = 1


Query: 1   MIRCPAGNTSGLNFNLYLSSMEGEKGQDEIDFEFLGKDRSIVQTNLYTGGAGNRERIHEL 60
           +I+CP GNTSGLNFN+YLSS+EG+K QDEIDFEFLGKD++IVQTN YT G GNRE IH+L
Sbjct: 62  LIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGKDKTIVQTNYYTTGTGNREEIHDL 121

Query: 61  GFDCGDGFHKYSVKWGPDLVEWEIEGKVVRREE----EDIPRKAMFLYASMWDASNIDEG 120
           GFDC +GFH+Y +KWGPDL++W I+GKVVRR E    E  P K MFLYAS+WDAS+ID+ 
Sbjct: 122 GFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEGEGFPNKPMFLYASVWDASHIDKA 181

Query: 121 RWAGKYVGCNQPYVCVYKDVQVP 140
           RW G YVGC+ PYVC+YKD+ VP
Sbjct: 182 RWCGPYVGCDAPYVCLYKDIHVP 204

[Close]

BLAST of Lsi09G019340 vs. NCBI nr
Match: gi|728842850|gb|KHG22293.1| (putative xyloglucan endotransglucosylase/hydrolase 21 -like protein [Gossypium arboreum])

HSP 1 Score: 232.3 bits (591), Expect = 5.4e-58
Identity = 99/143 (69.23%), Postives = 121/143 (84.62%), Query Frame = 1


Query: 1   MIRCPAGNTSGLNFNLYLSSMEGEKGQDEIDFEFLGKDRSIVQTNLYTGGAGNRERIHEL 60
           +I+CP GNTSGLNFN+YLSS+EG+K QDEIDFEFLGKD++IVQTN YT G GNRE+IH+L
Sbjct: 62  LIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGKDKTIVQTNYYTTGTGNREQIHDL 121

Query: 61  GFDCGDGFHKYSVKWGPDLVEWEIEGKVVRREE----EDIPRKAMFLYASMWDASNIDEG 120
           GFDC DGFH+Y++KW PD +EW I+GKVVR+ E    E +P K MFLYAS+WDAS I EG
Sbjct: 122 GFDCSDGFHEYTIKWNPDSIEWVIDGKVVRKAEKKEGEAVPEKPMFLYASVWDASYIAEG 181

Query: 121 RWAGKYVGCNQPYVCVYKDVQVP 140
           +W G Y+GC+ PYVC+YKD+QVP
Sbjct: 182 QWTGPYIGCDVPYVCLYKDIQVP 204

[Close]

BLAST of Lsi09G019340 vs. NCBI nr
Match: gi|225453754|ref|XP_002273975.1| (PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 19 [Vitis vinifera])

HSP 1 Score: 231.9 bits (590), Expect = 7.1e-58
Identity = 100/143 (69.93%), Postives = 119/143 (83.22%), Query Frame = 1


Query: 1   MIRCPAGNTSGLNFNLYLSSMEGEKGQDEIDFEFLGKDRSIVQTNLYTGGAGNRERIHEL 60
           +I+CP GNTSGLNFN+YLSS+EG+K QDEIDFEFLGKD+ IVQTN YT G GNRE IH+L
Sbjct: 60  LIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGKDKRIVQTNYYTAGTGNREAIHDL 119

Query: 61  GFDCGDGFHKYSVKWGPDLVEWEIEGK----VVRREEEDIPRKAMFLYASMWDASNIDEG 120
           GFDC DGFH+Y +KWGPDL++W I+GK    VVR + E  P+K MFLYAS+WDAS IDEG
Sbjct: 120 GFDCSDGFHEYVIKWGPDLIQWLIDGKVIRSVVRADGEGFPQKPMFLYASVWDASYIDEG 179

Query: 121 RWAGKYVGCNQPYVCVYKDVQVP 140
           RW G YVGC+ PY+C+YK+V VP
Sbjct: 180 RWTGPYVGCDAPYICLYKNVNVP 202

The following BLAST results are available for this feature:

BLAST of Lsi09G019340 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GUB_BACSU	2.6e-20	38.89	Beta-glucanase OS=Bacillus subtilis (strain 168) GN=bglS PE=1 SV=2	[more]
GUB_BACAM	7.6e-20	38.10	Beta-glucanase OS=Bacillus amyloliquefaciens GN=bglA PE=3 SV=1	[more]
GUB_PAEMA	6.5e-19	37.30	Beta-glucanase OS=Paenibacillus macerans PE=1 SV=2	[more]
GUB_BACLI	3.2e-18	40.21	Beta-glucanase OS=Bacillus licheniformis GN=bg1 PE=1 SV=1	[more]
GUB_PAEPO	4.2e-18	37.30	Beta-glucanase OS=Paenibacillus polymyxa GN=gluB PE=3 SV=1	[more]

BLAST of Lsi09G019340 vs. TrEMBL


Match Name	E-value	Identity	Description
W9RDT3_9ROSA	4.3e-62	74.65	Putative xyloglucan endotransglucosylase/hydrolase protein 27 OS=Morus notabilis...	[more]
A0A067H1W4_CITSI	1.7e-58	69.93	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028023mg PE=4 SV=1	[more]
V4U876_9ROSI	1.7e-58	69.93	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022200mg PE=4 SV=1	[more]
A0A0B0P6I9_GOSAR	3.8e-58	69.23	Putative xyloglucan endotransglucosylase/hydrolase 21-like protein OS=Gossypium ...	[more]
F6I323_VITVI	4.9e-58	69.93	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g01850 PE=4 SV=...	[more]

BLAST of Lsi09G019340 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G06850.1	1.3e-17	34.64	xyloglucan endotransglucosylase/hydrolase 4	[more]
AT1G14720.1	9.3e-16	35.95	xyloglucan endotransglucosylase/hydrolase 28	[more]
AT5G13870.1	2.1e-15	34.69	xyloglucan endotransglucosylase/hydrolase 5	[more]
AT2G01850.1	6.0e-15	35.95	endoxyloglucan transferase A3	[more]
AT4G18990.1	6.0e-15	34.67	xyloglucan endotransglucosylase/hydrolase 29	[more]

BLAST of Lsi09G019340 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|703085415\|ref\|XP_010092731.1\|	6.2e-62	74.65	putative xyloglucan endotransglucosylase/hydrolase protein 27 [Morus notabilis]	[more]
gi\|1009163867\|ref\|XP_015900194.1\|	4.4e-60	72.73	PREDICTED: beta-glucanase-like [Ziziphus jujuba]	[more]
gi\|567905346\|ref\|XP_006445161.1\|	2.4e-58	69.93	hypothetical protein CICLE_v10022200mg [Citrus clementina]	[more]
gi\|728842850\|gb\|KHG22293.1\|	5.4e-58	69.23	putative xyloglucan endotransglucosylase/hydrolase 21 -like protein [Gossypium a...	[more]
gi\|225453754\|ref\|XP_002273975.1\|	7.1e-58	69.93	PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 19 [Vitis ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0005975	carbohydrate metabolic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds

Vocabulary: **INTERPRO**
Term	Definition
IPR013320	ConA-like_dom_sf
IPR008264	Beta_glucanase
IPR000757	GH16

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G019340.1	Lsi09G019340.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000757	Glycoside hydrolase family 16	PFAM	PF00722	Glyco_hydro_16	coord: 6..114 score: 6.3
IPR000757	Glycoside hydrolase family 16	PROFILE	PS51762	GH16_2	coord: 1..138 score: 14
IPR008264	Beta-glucanase	PRINTS	PR00737	GLHYDRLASE16	coord: 26..41 score: 1.6E-14coord: 42..55 score: 1.6E-14coord: 60..77 score: 1.6E-14coord: 80..97 score: 1.6
IPR013320	Concanavalin A-like lectin/glucanase domain	GENE3D	G3DSA:2.60.120.200		coord: 2..138 score: 8.0
IPR013320	Concanavalin A-like lectin/glucanase domain	unknown	SSF49899	Concanavalin A-like lectins/glucanases	coord: 2..126 score: 3.41
None	No IPR available	PANTHER	PTHR31062	FAMILY NOT NAMED	coord: 1..138 score: 6.4
None	No IPR available	PANTHER	PTHR31062:SF9	SUBFAMILY NOT NAMED	coord: 1..138 score: 6.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi09G019340	BhiUN123G49	Wax gourd	lsiwgoB058

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi09G019340	Bottle gourd (USVL1VR-Ls)	lsilsiB007
Lsi09G019340	Cucumber (Gy14) v1	cgylsiB410
Lsi09G019340	Cucumber (Gy14) v1	cgylsiB583
Lsi09G019340	Cucurbita maxima (Rimu)	cmalsiB223
Lsi09G019340	Cucurbita maxima (Rimu)	cmalsiB303
Lsi09G019340	Cucurbita maxima (Rimu)	cmalsiB332
Lsi09G019340	Cucurbita maxima (Rimu)	cmalsiB743
Lsi09G019340	Cucurbita maxima (Rimu)	cmalsiB818
Lsi09G019340	Cucurbita moschata (Rifu)	cmolsiB211
Lsi09G019340	Cucurbita moschata (Rifu)	cmolsiB321
Lsi09G019340	Cucurbita moschata (Rifu)	cmolsiB735
Lsi09G019340	Cucurbita moschata (Rifu)	cmolsiB804
Lsi09G019340	Cucurbita pepo (Zucchini)	cpelsiB102
Lsi09G019340	Cucurbita pepo (Zucchini)	cpelsiB250
Lsi09G019340	Cucurbita pepo (Zucchini)	cpelsiB482
Lsi09G019340	Cucurbita pepo (Zucchini)	cpelsiB696
Lsi09G019340	Wild cucumber (PI 183967)	cpilsiB153
Lsi09G019340	Wild cucumber (PI 183967)	cpilsiB404
Lsi09G019340	Cucumber (Chinese Long) v2	culsiB154
Lsi09G019340	Cucumber (Chinese Long) v2	culsiB402
Lsi09G019340	Melon (DHL92) v3.5.1	lsimeB017
Lsi09G019340	Melon (DHL92) v3.5.1	lsimeB034
Lsi09G019340	Watermelon (Charleston Gray)	lsiwcgB022
Lsi09G019340	Watermelon (Charleston Gray)	lsiwcgB029
Lsi09G019340	Watermelon (97103) v1	lsiwmB020
Lsi09G019340	Watermelon (97103) v1	lsiwmB022
Lsi09G019340	Watermelon (97103) v1	lsiwmB041
Lsi09G019340	Cucumber (Gy14) v2	cgyblsiB140
Lsi09G019340	Cucumber (Gy14) v2	cgyblsiB366
Lsi09G019340	Melon (DHL92) v3.6.1	lsimedB019
Lsi09G019340	Melon (DHL92) v3.6.1	lsimedB035
Lsi09G019340	Silver-seed gourd	carlsiB205
Lsi09G019340	Silver-seed gourd	carlsiB564
Lsi09G019340	Silver-seed gourd	carlsiB979
Lsi09G019340	Cucumber (Chinese Long) v3	cuclsiB170
Lsi09G019340	Cucumber (Chinese Long) v3	cuclsiB424
Lsi09G019340	Watermelon (97103) v2	lsiwmbB020
Lsi09G019340	Watermelon (97103) v2	lsiwmbB026