Lsi09G019120 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi09G019120
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Gibberellin receptor GID1
Location	chr09 : 27947198 .. 27947713 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGCCGCCTCCTCTGTTTCTCAATCACAATTCGCAATGCATCTCCCTGAAAGTTCCCCCATTTTCCCCCTTCCCACCGCCATGCGCCGTTCTCATACCATGTCCAAATTCAACCCTTACGAACATCTCAGCGTCTCCCTCAACCCCGACGGTTCTCTTTCCCGCCTCCTCCACCTCCCCGCCATTTCCTCCTCCGCCCCCGGAGATCCCGTTGCCTTCAAAGACATCACTCTCAACGCCTCCGCCGCCACCTGGTTCCGCCTCTTCCGACCCACCAACATACCCGCCAACGACGGCGTCGCTGCCCGTCTCCCCATCGTCATTTACTTTCACCATGGTGGCTGGATCCTCCACACCGCTTCCGATGCCATCACTCACCGGAACTGCGCCGACCTTGCCGCCCAGATCCCTGCCATCGCCATCTCTGTCAACTACCGTCTCGCCCCCGAGAGCCGGCTGCCGGCGCAGTACGACGACGCCGTGGACGCCCTCCGGTGGGTGAAGACCNGTTGA

mRNA sequence

ATGGCCGCCGCCTCCTCTGTTTCTCAATCACAATTCGCAATGCATCTCCCTGAAAGTTCCCCCATTTTCCCCCTTCCCACCGCCATGCGCCGTTCTCATACCATGTCCAAATTCAACCCTTACGAACATCTCAGCGTCTCCCTCAACCCCGACGGTTCTCTTTCCCGCCTCCTCCACCTCCCCGCCATTTCCTCCTCCGCCCCCGGAGATCCCGTTGCCTTCAAAGACATCACTCTCAACGCCTCCGCCGCCACCTGGTTCCGCCTCTTCCGACCCACCAACATACCCGCCAACGACGGCGTCGCTGCCCGTCTCCCCATCGTCATTTACTTTCACCATGGTGGCTGGATCCTCCACACCGCTTCCGATGCCATCACTCACCGGAACTGCGCCGACCTTGCCGCCCAGATCCCTGCCATCGCCATCTCTGTCAACTACCGTCTCGCCCCCGAGAGCCGGCTGCCGGCGCAGTACGACGACGCCGTGGACGCCCTCCGGTGGGTGAAGACCNGTTGA

Coding sequence (CDS)

ATGGCCGCCGCCTCCTCTGTTTCTCAATCACAATTCGCAATGCATCTCCCTGAAAGTTCCCCCATTTTCCCCCTTCCCACCGCCATGCGCCGTTCTCATACCATGTCCAAATTCAACCCTTACGAACATCTCAGCGTCTCCCTCAACCCCGACGGTTCTCTTTCCCGCCTCCTCCACCTCCCCGCCATTTCCTCCTCCGCCCCCGGAGATCCCGTTGCCTTCAAAGACATCACTCTCAACGCCTCCGCCGCCACCTGGTTCCGCCTCTTCCGACCCACCAACATACCCGCCAACGACGGCGTCGCTGCCCGTCTCCCCATCGTCATTTACTTTCACCATGGTGGCTGGATCCTCCACACCGCTTCCGATGCCATCACTCACCGGAACTGCGCCGACCTTGCCGCCCAGATCCCTGCCATCGCCATCTCTGTCAACTACCGTCTCGCCCCCGAGAGCCGGCTGCCGGCGCAGTACGACGACGCCGTGGACGCCCTCCGGTGGGTGAAGACCNGTTGA

Protein sequence

MAAASSVSQSQFAMHLPESSPIFPLPTAMRRSHTMSKFNPYEHLSVSLNPDGSLSRLLHLPAISSSAPGDPVAFKDITLNASAATWFRLFRPTNIPANDGVAARLPIVIYFHHGGWILHTASDAITHRNCADLAAQIPAIAISVNYRLAPESRLPAQYDDAVDALRWVKTX

Homology

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BLAST of Lsi09G019120 vs. Swiss-Prot
Match: CXE9_ARATH (Probable carboxylesterase 9 OS=Arabidopsis thaliana GN=CXE9 PE=2 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 5.0e-34
Identity = 66/135 (48.89%), Postives = 92/135 (68.15%), Query Frame = 1


Query: 38  FNPYEHLSVSLNPDGSLSRLLHLPAISSS---APGDPVAFKDITLNASAATWFRLFRPTN 97
           F+PY+HL++++NP+GS +R    P +       PG   A KD+T+N       R+FRPTN
Sbjct: 9   FDPYKHLNITINPNGSCTRHFVWPRVEPDPDPCPGKLAASKDVTINHETGVSVRIFRPTN 68

Query: 98  IPANDGVAARLPIVIYFHHGGWILHTASDAITHRNCADLAAQIPAIAISVNYRLAPESRL 157
           +P+ND   ARLPI+I+ H  GWIL+ A+ A   R C+ +A+++  I +SV+YRL PE RL
Sbjct: 69  LPSNDNAVARLPIIIHLHGSGWILYPANSAANDRCCSQMASELTVIVVSVHYRLPPEHRL 128

Query: 158 PAQYDDAVDALRWVK 170
           PAQYDDA+DAL WVK
Sbjct: 129 PAQYDDALDALLWVK 143

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BLAST of Lsi09G019120 vs. Swiss-Prot
Match: CXE8_ARATH (Probable carboxylesterase 8 OS=Arabidopsis thaliana GN=CXE8 PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 3.3e-25
Identity = 57/131 (43.51%), Postives = 87/131 (66.41%), Query Frame = 1


Query: 39  NPYEHLSVSLNPDGSLSRLLHLPAISSSAPGDPVAFKDITLNASAATWFRLFRPTNIPAN 98
           +PY+ L+++LN DGSL+R    P +  +        KDI LN +  T+ R+F+P NIP  
Sbjct: 9   DPYKFLNITLNSDGSLTRHRDFPKLPPTEQS-----KDIPLNQTNNTFIRIFKPRNIPPE 68

Query: 99  DGVAARLPIVIYFHHGGWILHTASDAITHRNCADLAAQIPAIAISVNYRLAPESRLPAQY 158
               ++LPI++YFH GG+IL++A+ A  H +C  +A ++  I +SV YRLAPE RLPA Y
Sbjct: 69  ----SKLPILVYFHGGGFILYSAASAPFHESCTKMADRLQTIILSVEYRLAPEHRLPAAY 128

Query: 159 DDAVDALRWVK 170
           +DAV+A+ W++
Sbjct: 129 EDAVEAILWLR 130

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BLAST of Lsi09G019120 vs. Swiss-Prot
Match: CXE20_ARATH (Probable carboxylesterase 120 OS=Arabidopsis thaliana GN=CXE20 PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 7.3e-25
Identity = 57/137 (41.61%), Postives = 91/137 (66.42%), Query Frame = 1


Query: 39  NPYEHLSVSLNPDGSLSR-LLHLPAISSS---APGDPVAFKDITLNASAATWFRLFRPTN 98
           +PY +L++  NPDGS++R L + P  +++   +P +P   KD+ +N   +TW RL+ P++
Sbjct: 9   DPYAYLNIVNNPDGSITRDLSNFPCTAATPDPSPLNPAVSKDLPVNQLKSTWLRLYLPSS 68

Query: 99  IPANDGVAA-RLPIVIYFHHGGWILHTASDAITHRNCADLAAQIPAIAISVNYRLAPESR 158
                 V++ +LPIV+Y+H GG+IL +    + H  C+++A  + AI +S +YRLAPE R
Sbjct: 69  AVNEGNVSSQKLPIVVYYHGGGFILCSVDMQLFHDFCSEVARDLNAIVVSPSYRLAPEHR 128

Query: 159 LPAQYDDAVDALRWVKT 171
           LPA YDD V+AL W+KT
Sbjct: 129 LPAAYDDGVEALDWIKT 145

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BLAST of Lsi09G019120 vs. Swiss-Prot
Match: CXE1_ACTER (Carboxylesterase 1 OS=Actinidia eriantha GN=CXE1 PE=1 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 4.7e-24
Identity = 57/134 (42.54%), Postives = 86/134 (64.18%), Query Frame = 1


Query: 39  NPYEHLSVSLNPDGSLSRLLHLPAISSS---APGDPVAFKDITLNASAATWFRLFRPTNI 98
           N  ++L + LNPD +++R + +P+ ++S       PV  KD+ LN    T+ RLF P + 
Sbjct: 17  NLLKYLPIVLNPDRTITRPIQIPSTAASPDPTSSSPVLTKDLALNPLHNTFVRLFLPRHA 76

Query: 99  PANDGVAARLPIVIYFHHGGWILHTASDAITHRNCADLAAQIPAIAISVNYRLAPESRLP 158
             N   +A+LP+V+YFH GG+IL +A+  I H  C ++A     +  SV+YRLAPE RLP
Sbjct: 77  LYN---SAKLPLVVYFHGGGFILFSAASTIFHDFCCEMAVHAGVVIASVDYRLAPEHRLP 136

Query: 159 AQYDDAVDALRWVK 170
           A YDDA++AL+W+K
Sbjct: 137 AAYDDAMEALQWIK 147

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BLAST of Lsi09G019120 vs. Swiss-Prot
Match: CXE18_ARATH (Probable carboxylesterase 18 OS=Arabidopsis thaliana GN=CXE18 PE=1 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 4.0e-15
Identity = 45/124 (36.29%), Postives = 71/124 (57.26%), Query Frame = 1


Query: 50  PDGSLSR----LLHLPAISSSAPGDPVAFKDITLNASAATWFRLFRPTNIPANDGVAARL 109
           PDG+++R    L    A  +  P + V+  D  ++ S   WFRL+ P ++  +     ++
Sbjct: 34  PDGTINRRFLRLFDFRAPPNPKPVNIVSTSDFVVDQSRDLWFRLYTP-HVSGD-----KI 93

Query: 110 PIVIYFHHGGWILHTASDAITHRNCADLAAQIPAIAISVNYRLAPESRLPAQYDDAVDAL 169
           P+V++FH GG+   + +       C   A ++PA  ISVNYRLAPE R PAQYDD  DAL
Sbjct: 94  PVVVFFHGGGFAFLSPNAYPYDNVCRRFARKLPAYVISVNYRLAPEHRYPAQYDDGFDAL 151

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BLAST of Lsi09G019120 vs. TrEMBL
Match: A0A0A0K8Y6_CUCSA (Gibberellin receptor GID1 OS=Cucumis sativus GN=Csa_6G076740 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 4.2e-80
Identity = 152/176 (86.36%), Postives = 165/176 (93.75%), Query Frame = 1


Query: 1   MAAASS----VSQSQFAMHLPESSPIF--PLPTAMRRSHTMSKFNPYEHLSVSLNPDGSL 60
           MAAASS    +SQSQF MHLPE++PIF  PLPTAMRRSHTMSKFNPYEHLSVSLNPDGSL
Sbjct: 1   MAAASSSSSPLSQSQFTMHLPETAPIFPLPLPTAMRRSHTMSKFNPYEHLSVSLNPDGSL 60

Query: 61  SRLLHLPAISSSAPGDPVAFKDITLNASAATWFRLFRPTNIPANDGVAARLPIVIYFHHG 120
           SRLL LPA+SS++P DPV+FKDI+LN S+ATW RLFRPTNIPANDGVAARLPI+IYFHHG
Sbjct: 61  SRLLQLPAVSSTSPVDPVSFKDISLNPSSATWLRLFRPTNIPANDGVAARLPILIYFHHG 120

Query: 121 GWILHTASDAITHRNCADLAAQIPAIAISVNYRLAPESRLPAQYDDAVDALRWVKT 171
           GWILH+ASDAITHRNCADLA+QIPAIAISVNYRLAPE+RLPAQYDDAVDALRWVKT
Sbjct: 121 GWILHSASDAITHRNCADLASQIPAIAISVNYRLAPENRLPAQYDDAVDALRWVKT 176

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BLAST of Lsi09G019120 vs. TrEMBL
Match: M5XGY0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021562mg PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 3.3e-40
Identity = 78/139 (56.12%), Postives = 103/139 (74.10%), Query Frame = 1


Query: 35  MSKFNPYEHLSVSLNP-DGSLSRLLHLPAISSSA---PGDPVAFKDITLNASAATWFRLF 94
           MSKF+PY HL++S +P   +L+R    P   ++    PGDPV FKD+TLN    TW R+F
Sbjct: 1   MSKFDPYAHLNISHDPATDTLTRPATTPTTPTNTDPTPGDPVVFKDVTLNPETRTWARIF 60

Query: 95  RPTNIPANDGVAARLPIVIYFHHGGWILHTASDAITHRNCADLAAQIPAIAISVNYRLAP 154
           RPT +P+ND   ARLPI+IYFHHGGWIL +A+DA  H NC+ + +++P I +SVNYRLAP
Sbjct: 61  RPTKLPSNDNTVARLPIIIYFHHGGWILLSAADAAAHTNCSQITSEVPVIIVSVNYRLAP 120

Query: 155 ESRLPAQYDDAVDALRWVK 170
           ESRLPAQ+ DA+DA+ WV+
Sbjct: 121 ESRLPAQHHDALDAIHWVR 139

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BLAST of Lsi09G019120 vs. TrEMBL
Match: A0A103XIB8_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_006811 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 4.0e-38
Identity = 77/140 (55.00%), Postives = 100/140 (71.43%), Query Frame = 1


Query: 35  MSKFNPYEHLSVSLNPDGSLSRLLHLPAISSSAPGDPV-----AFKDITLNASAATWFRL 94
           MSKF+PYEHL V  N DG+L+RL+  P I ++   DPV       KD+TL+A+  TW R+
Sbjct: 1   MSKFDPYEHLKVLKNEDGTLTRLVQFPQIPATGDADPVPGQTVVSKDVTLDATKKTWLRI 60

Query: 95  FRPTNIPANDGVAARLPIVIYFHHGGWILHTASDAITHRNCADLAAQIPAIAISVNYRLA 154
            RP  IP+ND   ARLP+VIYFH GGWIL + SDA+ H     L+ +IPAI ++VN+RLA
Sbjct: 61  HRPAKIPSNDNKIARLPLVIYFHAGGWILFSVSDALNHEAMNKLSDEIPAIIVAVNFRLA 120

Query: 155 PESRLPAQYDDAVDALRWVK 170
           PE+RLP QYDDA+DA+ W+K
Sbjct: 121 PETRLPGQYDDAMDAINWIK 140

[Close]

BLAST of Lsi09G019120 vs. TrEMBL
Match: E6NU33_JATCU (JHL05D22.14 protein OS=Jatropha curcas GN=JHL05D22.14 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.3e-36
Identity = 73/139 (52.52%), Postives = 102/139 (73.38%), Query Frame = 1


Query: 34  TMSKFNPYEHLSVSLNPDGSLSRLLHLPAISSS---APGDPVAFKDITLNASAATWFRLF 93
           ++SK +PY+HL ++LN DG+++RLL  P + ++     GD V  KD TLNA   TW R++
Sbjct: 5   SVSKSDPYDHLHIALNLDGTITRLLTHPTVEANPEATSGDAVVCKDWTLNAQNKTWLRIY 64

Query: 94  RPTNIPANDGVAARLPIVIYFHHGGWILHTASDAITHRNCADLAAQIPAIAISVNYRLAP 153
           RPT +P+ND   ARLPI+IYFH GG+IL +A    +H  C + A++IPAI +S++YRLAP
Sbjct: 65  RPTRLPSNDNTIARLPIIIYFHGGGFILFSAKTKTSHEKCCEYASEIPAIVVSLDYRLAP 124

Query: 154 ESRLPAQYDDAVDALRWVK 170
           E RLPAQY+DA+DA+ WVK
Sbjct: 125 ECRLPAQYEDAIDAIIWVK 143

[Close]

BLAST of Lsi09G019120 vs. TrEMBL
Match: A0A068VAG2_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00003938001 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 2.9e-36
Identity = 72/140 (51.43%), Postives = 97/140 (69.29%), Query Frame = 1


Query: 35  MSKFNPYEHLSVSLNPDGSLSRLLHLPAISSSAP-----GDPVAFKDITLNASAATWFRL 94
           MSKF+PYEHL V+LNPDGSL+R + LP   ++       G   A KD+ L+    TW R+
Sbjct: 1   MSKFDPYEHLKVALNPDGSLTRYIRLPTTPATGENTQLVGQSAASKDVVLSEEKKTWLRI 60

Query: 95  FRPTNIPANDGVAARLPIVIYFHHGGWILHTASDAITHRNCADLAAQIPAIAISVNYRLA 154
           +RP  +P+ND   ARLPI+IYFH GGWI  +    + H +C  L++++PAI ++V +RLA
Sbjct: 61  YRPAKLPSNDKSIARLPIIIYFHAGGWIQLSVEQTVIHESCNLLSSEVPAIVVAVEFRLA 120

Query: 155 PESRLPAQYDDAVDALRWVK 170
           PESRLPAQY+DA DA+ WVK
Sbjct: 121 PESRLPAQYEDATDAILWVK 140

[Close]

BLAST of Lsi09G019120 vs. TAIR10
Match: AT2G45610.1 (AT2G45610.1 alpha/beta-Hydrolases superfamily protein)

HSP 1 Score: 145.6 bits (366), Expect = 2.8e-35
Identity = 66/135 (48.89%), Postives = 92/135 (68.15%), Query Frame = 1


Query: 38  FNPYEHLSVSLNPDGSLSRLLHLPAISSS---APGDPVAFKDITLNASAATWFRLFRPTN 97
           F+PY+HL++++NP+GS +R    P +       PG   A KD+T+N       R+FRPTN
Sbjct: 9   FDPYKHLNITINPNGSCTRHFVWPRVEPDPDPCPGKLAASKDVTINHETGVSVRIFRPTN 68

Query: 98  IPANDGVAARLPIVIYFHHGGWILHTASDAITHRNCADLAAQIPAIAISVNYRLAPESRL 157
           +P+ND   ARLPI+I+ H  GWIL+ A+ A   R C+ +A+++  I +SV+YRL PE RL
Sbjct: 69  LPSNDNAVARLPIIIHLHGSGWILYPANSAANDRCCSQMASELTVIVVSVHYRLPPEHRL 128

Query: 158 PAQYDDAVDALRWVK 170
           PAQYDDA+DAL WVK
Sbjct: 129 PAQYDDALDALLWVK 143

[Close]

BLAST of Lsi09G019120 vs. TAIR10
Match: AT2G45600.1 (AT2G45600.1 alpha/beta-Hydrolases superfamily protein)

HSP 1 Score: 116.3 bits (290), Expect = 1.8e-26
Identity = 57/131 (43.51%), Postives = 87/131 (66.41%), Query Frame = 1


Query: 39  NPYEHLSVSLNPDGSLSRLLHLPAISSSAPGDPVAFKDITLNASAATWFRLFRPTNIPAN 98
           +PY+ L+++LN DGSL+R    P +  +        KDI LN +  T+ R+F+P NIP  
Sbjct: 9   DPYKFLNITLNSDGSLTRHRDFPKLPPTEQS-----KDIPLNQTNNTFIRIFKPRNIPPE 68

Query: 99  DGVAARLPIVIYFHHGGWILHTASDAITHRNCADLAAQIPAIAISVNYRLAPESRLPAQY 158
               ++LPI++YFH GG+IL++A+ A  H +C  +A ++  I +SV YRLAPE RLPA Y
Sbjct: 69  ----SKLPILVYFHGGGFILYSAASAPFHESCTKMADRLQTIILSVEYRLAPEHRLPAAY 128

Query: 159 DDAVDALRWVK 170
           +DAV+A+ W++
Sbjct: 129 EDAVEAILWLR 130

[Close]

BLAST of Lsi09G019120 vs. TAIR10
Match: AT5G62180.1 (AT5G62180.1 carboxyesterase 20)

HSP 1 Score: 115.2 bits (287), Expect = 4.1e-26
Identity = 57/137 (41.61%), Postives = 91/137 (66.42%), Query Frame = 1


Query: 39  NPYEHLSVSLNPDGSLSR-LLHLPAISSS---APGDPVAFKDITLNASAATWFRLFRPTN 98
           +PY +L++  NPDGS++R L + P  +++   +P +P   KD+ +N   +TW RL+ P++
Sbjct: 9   DPYAYLNIVNNPDGSITRDLSNFPCTAATPDPSPLNPAVSKDLPVNQLKSTWLRLYLPSS 68

Query: 99  IPANDGVAA-RLPIVIYFHHGGWILHTASDAITHRNCADLAAQIPAIAISVNYRLAPESR 158
                 V++ +LPIV+Y+H GG+IL +    + H  C+++A  + AI +S +YRLAPE R
Sbjct: 69  AVNEGNVSSQKLPIVVYYHGGGFILCSVDMQLFHDFCSEVARDLNAIVVSPSYRLAPEHR 128

Query: 159 LPAQYDDAVDALRWVKT 171
           LPA YDD V+AL W+KT
Sbjct: 129 LPAAYDDGVEALDWIKT 145

[Close]

BLAST of Lsi09G019120 vs. TAIR10
Match: AT5G23530.1 (AT5G23530.1 carboxyesterase 18)

HSP 1 Score: 82.8 bits (203), Expect = 2.2e-16
Identity = 45/124 (36.29%), Postives = 71/124 (57.26%), Query Frame = 1


Query: 50  PDGSLSR----LLHLPAISSSAPGDPVAFKDITLNASAATWFRLFRPTNIPANDGVAARL 109
           PDG+++R    L    A  +  P + V+  D  ++ S   WFRL+ P ++  +     ++
Sbjct: 34  PDGTINRRFLRLFDFRAPPNPKPVNIVSTSDFVVDQSRDLWFRLYTP-HVSGD-----KI 93

Query: 110 PIVIYFHHGGWILHTASDAITHRNCADLAAQIPAIAISVNYRLAPESRLPAQYDDAVDAL 169
           P+V++FH GG+   + +       C   A ++PA  ISVNYRLAPE R PAQYDD  DAL
Sbjct: 94  PVVVFFHGGGFAFLSPNAYPYDNVCRRFARKLPAYVISVNYRLAPEHRYPAQYDDGFDAL 151

[Close]

BLAST of Lsi09G019120 vs. TAIR10
Match: AT1G68620.1 (AT1G68620.1 alpha/beta-Hydrolases superfamily protein)

HSP 1 Score: 82.4 bits (202), Expect = 2.9e-16
Identity = 43/124 (34.68%), Postives = 70/124 (56.45%), Query Frame = 1


Query: 46  VSLNPDGSLSRLLHLPAISSSAPGD-PVAFKDITLNASAATWFRLFRPTNIPANDGVAAR 105
           + +  DG + R   LP +  S P +  V   D+ ++     W RL+ P     +    ++
Sbjct: 31  IKVYKDGHVERSQLLPCVDPSLPLELGVTCSDVVIDKLTNVWARLYVPMTTTKSS--VSK 90

Query: 106 LPIVIYFHHGGWILHTASDAITHRNCADLAAQIPAIAISVNYRLAPESRLPAQYDDAVDA 165
           LP+++YFH GG+ + +AS    H   A L+A+   + +SVNYRLAPE+ LPA Y+D V+A
Sbjct: 91  LPLIVYFHGGGFCVGSASWLCYHEFLARLSARSRCLVMSVNYRLAPENPLPAAYEDGVNA 150

Query: 166 LRWV 169
           + W+
Sbjct: 151 ILWL 152

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BLAST of Lsi09G019120 vs. NCBI nr
Match: gi|778711123|ref|XP_004144994.2| (PREDICTED: probable carboxylesterase 9 [Cucumis sativus])

HSP 1 Score: 305.4 bits (781), Expect = 6.1e-80
Identity = 152/176 (86.36%), Postives = 165/176 (93.75%), Query Frame = 1


Query: 1   MAAASS----VSQSQFAMHLPESSPIF--PLPTAMRRSHTMSKFNPYEHLSVSLNPDGSL 60
           MAAASS    +SQSQF MHLPE++PIF  PLPTAMRRSHTMSKFNPYEHLSVSLNPDGSL
Sbjct: 1   MAAASSSSSPLSQSQFTMHLPETAPIFPLPLPTAMRRSHTMSKFNPYEHLSVSLNPDGSL 60

Query: 61  SRLLHLPAISSSAPGDPVAFKDITLNASAATWFRLFRPTNIPANDGVAARLPIVIYFHHG 120
           SRLL LPA+SS++P DPV+FKDI+LN S+ATW RLFRPTNIPANDGVAARLPI+IYFHHG
Sbjct: 61  SRLLQLPAVSSTSPVDPVSFKDISLNPSSATWLRLFRPTNIPANDGVAARLPILIYFHHG 120

Query: 121 GWILHTASDAITHRNCADLAAQIPAIAISVNYRLAPESRLPAQYDDAVDALRWVKT 171
           GWILH+ASDAITHRNCADLA+QIPAIAISVNYRLAPE+RLPAQYDDAVDALRWVKT
Sbjct: 121 GWILHSASDAITHRNCADLASQIPAIAISVNYRLAPENRLPAQYDDAVDALRWVKT 176

[Close]

BLAST of Lsi09G019120 vs. NCBI nr
Match: gi|659120335|ref|XP_008460140.1| (PREDICTED: probable carboxylesterase 9 [Cucumis melo])

HSP 1 Score: 290.4 bits (742), Expect = 2.0e-75
Identity = 140/159 (88.05%), Postives = 148/159 (93.08%), Query Frame = 1


Query: 14  MHLPESSPIF--PLPTAMRRSHTMSKFNPYEHLSVSLNPDGSLSRLLHLPAISSSAPGDP 73
           MHLPE++PIF  PLPTAMRRSHTMSKFNPYEHLSVSLNPDGSLSRLL LPA+SS  P DP
Sbjct: 1   MHLPETAPIFPLPLPTAMRRSHTMSKFNPYEHLSVSLNPDGSLSRLLQLPAVSSPNPADP 60

Query: 74  VAFKDITLNASAATWFRLFRPTNIPANDGVAARLPIVIYFHHGGWILHTASDAITHRNCA 133
           V+FKDI LN S+ATW RLFRPTNIPANDGV ARLPI+IYFHHGGWILH+ASDAITHRNCA
Sbjct: 61  VSFKDIALNPSSATWLRLFRPTNIPANDGVVARLPILIYFHHGGWILHSASDAITHRNCA 120

Query: 134 DLAAQIPAIAISVNYRLAPESRLPAQYDDAVDALRWVKT 171
           DLA+QIPAIAISVNYRLAPESRLPAQYDDA DALRWVKT
Sbjct: 121 DLASQIPAIAISVNYRLAPESRLPAQYDDAADALRWVKT 159

[Close]

BLAST of Lsi09G019120 vs. NCBI nr
Match: gi|764626177|ref|XP_011469117.1| (PREDICTED: probable carboxylesterase 9 [Fragaria vesca subsp. vesca])

HSP 1 Score: 182.6 bits (462), Expect = 5.9e-43
Identity = 83/139 (59.71%), Postives = 110/139 (79.14%), Query Frame = 1


Query: 35  MSKFNPYEHLSVSLNP-DGSLSRLLHLP---AISSSAPGDPVAFKDITLNASAATWFRLF 94
           MSKF+PY HL++  NP D +L+RL+ LP   A  +S+PGDPVA KD+TLN+   TW R+F
Sbjct: 1   MSKFDPYTHLNIVHNPIDDTLTRLVSLPTTDANPNSSPGDPVASKDLTLNSETKTWLRIF 60

Query: 95  RPTNIPANDGVAARLPIVIYFHHGGWILHTASDAITHRNCADLAAQIPAIAISVNYRLAP 154
           RP+ +P+ND   ARLPI+IYFHHGGW+L +A+D   H NC+ + +Q+PAI +SVNYRLAP
Sbjct: 61  RPSKLPSNDNTVARLPIIIYFHHGGWLLLSAADTSIHTNCSLITSQVPAILVSVNYRLAP 120

Query: 155 ESRLPAQYDDAVDALRWVK 170
           E+RLPAQY+DA+DA+ WVK
Sbjct: 121 EARLPAQYEDALDAIHWVK 139

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BLAST of Lsi09G019120 vs. NCBI nr
Match: gi|596033518|ref|XP_007219534.1| (hypothetical protein PRUPE_ppa021562mg [Prunus persica])

HSP 1 Score: 172.9 bits (437), Expect = 4.7e-40
Identity = 78/139 (56.12%), Postives = 103/139 (74.10%), Query Frame = 1


Query: 35  MSKFNPYEHLSVSLNP-DGSLSRLLHLPAISSSA---PGDPVAFKDITLNASAATWFRLF 94
           MSKF+PY HL++S +P   +L+R    P   ++    PGDPV FKD+TLN    TW R+F
Sbjct: 1   MSKFDPYAHLNISHDPATDTLTRPATTPTTPTNTDPTPGDPVVFKDVTLNPETRTWARIF 60

Query: 95  RPTNIPANDGVAARLPIVIYFHHGGWILHTASDAITHRNCADLAAQIPAIAISVNYRLAP 154
           RPT +P+ND   ARLPI+IYFHHGGWIL +A+DA  H NC+ + +++P I +SVNYRLAP
Sbjct: 61  RPTKLPSNDNTVARLPIIIYFHHGGWILLSAADAAAHTNCSQITSEVPVIIVSVNYRLAP 120

Query: 155 ESRLPAQYDDAVDALRWVK 170
           ESRLPAQ+ DA+DA+ WV+
Sbjct: 121 ESRLPAQHHDALDAIHWVR 139

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BLAST of Lsi09G019120 vs. NCBI nr
Match: gi|976903276|gb|KVH91187.1| (hypothetical protein Ccrd_006811 [Cynara cardunculus var. scolymus])

HSP 1 Score: 166.0 bits (419), Expect = 5.7e-38
Identity = 77/140 (55.00%), Postives = 100/140 (71.43%), Query Frame = 1


Query: 35  MSKFNPYEHLSVSLNPDGSLSRLLHLPAISSSAPGDPV-----AFKDITLNASAATWFRL 94
           MSKF+PYEHL V  N DG+L+RL+  P I ++   DPV       KD+TL+A+  TW R+
Sbjct: 1   MSKFDPYEHLKVLKNEDGTLTRLVQFPQIPATGDADPVPGQTVVSKDVTLDATKKTWLRI 60

Query: 95  FRPTNIPANDGVAARLPIVIYFHHGGWILHTASDAITHRNCADLAAQIPAIAISVNYRLA 154
            RP  IP+ND   ARLP+VIYFH GGWIL + SDA+ H     L+ +IPAI ++VN+RLA
Sbjct: 61  HRPAKIPSNDNKIARLPLVIYFHAGGWILFSVSDALNHEAMNKLSDEIPAIIVAVNFRLA 120

Query: 155 PESRLPAQYDDAVDALRWVK 170
           PE+RLP QYDDA+DA+ W+K
Sbjct: 121 PETRLPGQYDDAMDAINWIK 140

The following BLAST results are available for this feature:

BLAST of Lsi09G019120 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CXE9_ARATH	5.0e-34	48.89	Probable carboxylesterase 9 OS=Arabidopsis thaliana GN=CXE9 PE=2 SV=1	[more]
CXE8_ARATH	3.3e-25	43.51	Probable carboxylesterase 8 OS=Arabidopsis thaliana GN=CXE8 PE=2 SV=1	[more]
CXE20_ARATH	7.3e-25	41.61	Probable carboxylesterase 120 OS=Arabidopsis thaliana GN=CXE20 PE=2 SV=1	[more]
CXE1_ACTER	4.7e-24	42.54	Carboxylesterase 1 OS=Actinidia eriantha GN=CXE1 PE=1 SV=1	[more]
CXE18_ARATH	4.0e-15	36.29	Probable carboxylesterase 18 OS=Arabidopsis thaliana GN=CXE18 PE=1 SV=1	[more]

BLAST of Lsi09G019120 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K8Y6_CUCSA	4.2e-80	86.36	Gibberellin receptor GID1 OS=Cucumis sativus GN=Csa_6G076740 PE=4 SV=1	[more]
M5XGY0_PRUPE	3.3e-40	56.12	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021562mg PE=4 SV=1	[more]
A0A103XIB8_CYNCS	4.0e-38	55.00	Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_006811 PE=4 ...	[more]
E6NU33_JATCU	1.3e-36	52.52	JHL05D22.14 protein OS=Jatropha curcas GN=JHL05D22.14 PE=4 SV=1	[more]
A0A068VAG2_COFCA	2.9e-36	51.43	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00003938001 PE=4 SV=1	[more]

BLAST of Lsi09G019120 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G45610.1	2.8e-35	48.89	alpha/beta-Hydrolases superfamily protein	[more]
AT2G45600.1	1.8e-26	43.51	alpha/beta-Hydrolases superfamily protein	[more]
AT5G62180.1	4.1e-26	41.61	carboxyesterase 20	[more]
AT5G23530.1	2.2e-16	36.29	carboxyesterase 18	[more]
AT1G68620.1	2.9e-16	34.68	alpha/beta-Hydrolases superfamily protein	[more]

BLAST of Lsi09G019120 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778711123\|ref\|XP_004144994.2\|	6.1e-80	86.36	PREDICTED: probable carboxylesterase 9 [Cucumis sativus]	[more]
gi\|659120335\|ref\|XP_008460140.1\|	2.0e-75	88.05	PREDICTED: probable carboxylesterase 9 [Cucumis melo]	[more]
gi\|764626177\|ref\|XP_011469117.1\|	5.9e-43	59.71	PREDICTED: probable carboxylesterase 9 [Fragaria vesca subsp. vesca]	[more]
gi\|596033518\|ref\|XP_007219534.1\|	4.7e-40	56.12	hypothetical protein PRUPE_ppa021562mg [Prunus persica]	[more]
gi\|976903276\|gb\|KVH91187.1\|	5.7e-38	55.00	hypothetical protein Ccrd_006811 [Cynara cardunculus var. scolymus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0016787	hydrolase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0008152	metabolic process

Vocabulary: **INTERPRO**
Term	Definition
IPR013094	AB_hydrolase_3

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016787	hydrolase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G019120.1	Lsi09G019120.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013094	Alpha/beta hydrolase fold-3	PFAM	PF07859	Abhydrolase_3	coord: 108..170 score: 9.2
None	No IPR available	PANTHER	PTHR23024	MEMBER OF 'GDXG' FAMILY OF LIPOLYTIC ENZYMES	coord: 29..168 score: 2.5
None	No IPR available	PANTHER	PTHR23024:SF212	SUBFAMILY NOT NAMED	coord: 29..168 score: 2.5

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi09G019120	Silver-seed gourd	carlsiB203
Lsi09G019120	Silver-seed gourd	carlsiB564
Lsi09G019120	Silver-seed gourd	carlsiB979
Lsi09G019120	Cucumber (Chinese Long) v3	cuclsiB170
Lsi09G019120	Cucumber (Chinese Long) v3	cuclsiB424
Lsi09G019120	Watermelon (97103) v2	lsiwmbB018
Lsi09G019120	Watermelon (97103) v2	lsiwmbB020
Lsi09G019120	Watermelon (97103) v2	lsiwmbB026
Lsi09G019120	Wax gourd	lsiwgoB039
Lsi09G019120	Bottle gourd (USVL1VR-Ls)	lsilsiB007
Lsi09G019120	Cucumber (Gy14) v1	cgylsiB410
Lsi09G019120	Cucumber (Gy14) v1	cgylsiB583
Lsi09G019120	Cucurbita maxima (Rimu)	cmalsiB223
Lsi09G019120	Cucurbita maxima (Rimu)	cmalsiB303
Lsi09G019120	Cucurbita maxima (Rimu)	cmalsiB334
Lsi09G019120	Cucurbita maxima (Rimu)	cmalsiB743
Lsi09G019120	Cucurbita maxima (Rimu)	cmalsiB818
Lsi09G019120	Cucurbita moschata (Rifu)	cmolsiB211
Lsi09G019120	Cucurbita moschata (Rifu)	cmolsiB323
Lsi09G019120	Cucurbita moschata (Rifu)	cmolsiB735
Lsi09G019120	Cucurbita moschata (Rifu)	cmolsiB804
Lsi09G019120	Cucurbita pepo (Zucchini)	cpelsiB104
Lsi09G019120	Cucurbita pepo (Zucchini)	cpelsiB250
Lsi09G019120	Cucurbita pepo (Zucchini)	cpelsiB482
Lsi09G019120	Cucurbita pepo (Zucchini)	cpelsiB696
Lsi09G019120	Wild cucumber (PI 183967)	cpilsiB153
Lsi09G019120	Wild cucumber (PI 183967)	cpilsiB404
Lsi09G019120	Cucumber (Chinese Long) v2	culsiB154
Lsi09G019120	Cucumber (Chinese Long) v2	culsiB402
Lsi09G019120	Melon (DHL92) v3.5.1	lsimeB017
Lsi09G019120	Melon (DHL92) v3.5.1	lsimeB034
Lsi09G019120	Watermelon (Charleston Gray)	lsiwcgB022
Lsi09G019120	Watermelon (Charleston Gray)	lsiwcgB029
Lsi09G019120	Watermelon (97103) v1	lsiwmB020
Lsi09G019120	Watermelon (97103) v1	lsiwmB022
Lsi09G019120	Watermelon (97103) v1	lsiwmB041
Lsi09G019120	Cucumber (Gy14) v2	cgyblsiB140
Lsi09G019120	Cucumber (Gy14) v2	cgyblsiB366
Lsi09G019120	Melon (DHL92) v3.6.1	lsimedB019
Lsi09G019120	Melon (DHL92) v3.6.1	lsimedB035