Lsi09G018330 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAAAAAAAAAAACATCGTTAAATTATGGAGGAAGAAAGCCAATTAAACACAGTGCCTAAATACTTCACTATCAAATCGAGGCTAAATGGCCGATATCTTCGCTACATTAACGACGATAAGATCATGCATGGATTTCTCAAGTTCTCTGGAACTCATGTGGTTAACCCATTCTCAAAGTTTGAAGTTGAAAAGGCTAAAGAGAAATCTAACAAAGGTCTTGTTCATATCAGGTGCGTTACATTTATTGTTCTCTGAATATTTCTAAATATTTTTATCTTTATTTATATTTTTTATTAACTATCTATTCACCCAATACTTCATCTCAAAACTATCTTGGTTGATATCAAGATGTATAAGTTATTGTCATTTGTTAGAAGAGAAAATTAACGGAAAGAACCGCTGTTTGACATAAAATATTAACTATTAATCGAGAGTCACCCTATATATAGAAAAATAATTAGGTGCAATCTAAGTTGCATTTAATCTATGCTCCTATATAAAAAAAATTTATTGGACAACTGTTTGGGATGCACAAAGCAACACCAAACTATTTTTCTTATACATGGTTTAAGTAAAAAAATTGCACTTATTTTAATTTAGGTTTTATTTTAGAGTAAATTTGAGTGTATCCAAAGATCGATGCATCTCATCTTTATATATGTCACTCTCATCATAATAATAATAAAAAAAACTATGATTGGACAATTTGACGAGAAAGATGTGTAGTTGTAGGGTGCATATCATATACCCAAGTATGTTTTTTTATTTTATGTCGTTCATAGCTACTTTGTTGTAAATTGTAATCTCTAAAATAATTTTCGTTTAAGGTGTTGTTACAACAACAAATATTGGGTTCGTTGGTCGGCAAAATCCAAGTACATTGTCGCAACGGCAAACGAACCCGACGAAGACCGAACAAAGTTCTCATCAACATTGTTCAAACCCATCTACGACGACGATCAAAAGGTGTTCCGTTTCAAACACGTGCAACTCGACCGATATGTTCAGCTACGACAACACATTGCGAGGCAGTTCCAAGACGCTCTGTTCGCCGACAGCTCGGGATTCGAACACGACGAATCAGATCTCTTAACAGTGGTGGATTGGTCCACCTTATTCGTACTTCCAAAACATGTAGCATTCAAGGGTGACAATGGGAATTATCTCAATGTCCATTCTTCTGGGACTAAATACTTGGAGTTTTCAGGATCCGATGTGGGCGATCCAAGAGTTGGCAACCAAATCTTCACCACTTCAGATGGACATGTAAGGATTAAGAACGATTATTTGGGGAAATTTTGGATTCGTGATCCTAATTGGATTCATGTGAAAGCCAGTGAAAGTGATTTTGATGATCCAAATACTCTGTTTTGGGCTGTTGGGCTTGGCGATGGTCATGGCGTAGCGCTTCGAAACAGAGGAAATGATAGGTTCTGTAAGAGGCTGAGTACGGAGGGGAAGGATAATTGTTTGAATGCTGCTGATACCAGCATCAGTGCTGAGGCTAAGCTTCAGATTGAAGAACTTGTCATTTCTAGAACCATTTACGATGTCAATTTTCGCGTTTTAGATGCCCGATTCTACGACGAGACCCCCATGACTATGATATCTAAAGAGGTTAATCCAATAATTTAACTCCTGTTTGATAACCGTTAGATCTTTCATTTTTTATTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATCTAACTTGTAGGCATATTTTTTAAAAACTATATCACGTTTTGAAAGTAGCAAAAAAATTGAAAATAAAGGTTTAATAAAAATATAATTGTATTTCACGTTTTCAGATATGTGTACAATTGTTTTAGAAGTGTTTAATACTATATTTATAAATTATAAAACTAGTTGTAATTATCCGTTAAATAATAGGTTGACTATAAAAATGTTTTAGGTTAAAAAAAATTGTATAATTATTATTTTCTAATATTATATAATTTATAGTACATTACATAATACATATTTTATTTAAAAAATAAATTACGTTTATAATATTATATAATATTTCTTAACATTTTTATGTTTATTTAATATAATTATACATTTTATATTCTAAAATTTTAAATTTTGACACAATGAAAACATATAAAAATATTTTTAGAATTTGCATTTTTTGGATCACAAATCCAAAAACATTTTTTAGAAACAGAATACAAATTGTCAATCAAATACATATTTACTCAATTCAATGAATTTGATAAAACATATAAAACAGAATTCAGATTATCAACAACTAAACAAACCCTAAGTTGTAAGAAAAAATATTTTTATTTTCAAAATTTGACTAAGAATTCAAATGTTTAGATATGAAAGATGAAAACCATGATAAAGAAGTTGCAAGAAAATAAGCACAATTTTCAAAAACAGAAAACAAAAAACCAAAGATCAAATAGTTATCAAATGAGAGACTTTAAAAAACACAAATTCGAACATATTTAATACTTTTATCTATAATGTTGTGAACAGATGGTGAACAGGAACAGCGAAGCGGAGGTGCAAAAGCTGAAGCTTCGGTATGACGATACAAAGTCGTCGACGTGGACGAACTCGGTGGGGATGAAGTTAGGGATGAAAATGTCAATTGAAACAGGAAGTCCAGAGATATCAAGCCAAGAAGTAGAAATTTCAGCTGAGTTCAGAGAAGAAGTAACATGGGGAGAAACAAAAGAAACAAAGTCTAGAAGGGAAGTGGAGCATCAAGTGACAGTACCAGCTAACACTCGAGTGACAGCCAAAGTGTTAGCCACTAAAGGATTTTGTGACATTCCATATTCTTACACTCAAAGAGATGTTCTAACCAATGGCAAAGTTGTAATTCAACACTTTGATGATGGGGTTTACATTGGAAGCAATTGCTATAACTACACCTTTGTCACTGAACAACAAGATCTTTGATTCAAAACCAAGAAGTAATATGAATCATAGAGTTCATCCATGTACTAAATAATGCTACTATGTTTGCAGCTTTGAATTTGAATTTCCTTTTGTGTGTCTTTTGCTTTTAAATTATGTATGTTTTGAAGACAATAAAAAGTGATACATGCATGTACTCATTTCAATTACTTTGGGCTTGTTTAATTTACAATTGGGAAGTTTATGTAATTTATTCGGTCAATTAAGTAAAAATGTAATTTTTCTTATTAAACACCTTGATCAGAGGTATCTATATTAAGATAAAACAGAACCCTAG AAAAAAAAAAAAAAAACATCGTTAAATTATGGAGGAAGAAAGCCAATTAAACACAGTGCCTAAATACTTCACTATCAAATCGAGGCTAAATGGCCGATATCTTCGCTACATTAACGACGATAAGATCATGCATGGATTTCTCAAGTTCTCTGGAACTCATGTGGTTAACCCATTCTCAAAGTTTGAAGTTGAAAAGGCTAAAGAGAAATCTAACAAAGGTCTTGTTCATATCAGGTGTTGTTACAACAACAAATATTGGGTTCGTTGGTCGGCAAAATCCAAGTACATTGTCGCAACGGCAAACGAACCCGACGAAGACCGAACAAAGTTCTCATCAACATTGTTCAAACCCATCTACGACGACGATCAAAAGGTGTTCCGTTTCAAACACGTGCAACTCGACCGATATGTTCAGCTACGACAACACATTGCGAGGCAGTTCCAAGACGCTCTGTTCGCCGACAGCTCGGGATTCGAACACGACGAATCAGATCTCTTAACAGTGGTGGATTGGTCCACCTTATTCGTACTTCCAAAACATGTAGCATTCAAGGGTGACAATGGGAATTATCTCAATGTCCATTCTTCTGGGACTAAATACTTGGAGTTTTCAGGATCCGATGTGGGCGATCCAAGAGTTGGCAACCAAATCTTCACCACTTCAGATGGACATGTAAGGATTAAGAACGATTATTTGGGGAAATTTTGGATTCGTGATCCTAATTGGATTCATGTGAAAGCCAGTGAAAGTGATTTTGATGATCCAAATACTCTGTTTTGGGCTGTTGGGCTTGGCGATGGTCATGGCGTAGCGCTTCGAAACAGAGGAAATGATAGGTTCTGTAAGAGGCTGAGTACGGAGGGGAAGGATAATTGTTTGAATGCTGCTGATACCAGCATCAGTGCTGAGGCTAAGCTTCAGATTGAAGAACTTGTCATTTCTAGAACCATTTACGATGTCAATTTTCGCGTTTTAGATGCCCGATTCTACGACGAGACCCCCATGACTATGATATCTAAAGAGATGGTGAACAGGAACAGCGAAGCGGAGGTGCAAAAGCTGAAGCTTCGGTATGACGATACAAAGTCGTCGACGTGGACGAACTCGGTGGGGATGAAGTTAGGGATGAAAATGTCAATTGAAACAGGAAGTCCAGAGATATCAAGCCAAGAAGTAGAAATTTCAGCTGAGTTCAGAGAAGAAGTAACATGGGGAGAAACAAAAGAAACAAAGTCTAGAAGGGAAGTGGAGCATCAAGTGACAGTACCAGCTAACACTCGAGTGACAGCCAAAGTGTTAGCCACTAAAGGATTTTGTGACATTCCATATTCTTACACTCAAAGAGATGTTCTAACCAATGGCAAAGTTGTAATTCAACACTTTGATGATGGGGTTTACATTGGAAGCAATTGCTATAACTACACCTTTGTCACTGAACAACAAGATCTTTGATTCAAAACCAAGAAGTAATATGAATCATAGAGTTCATCCATGTACTAAATAATGCTACTATGTTTGCAGCTTTGAATTTGAATTTCCTTTTGTGTGTCTTTTGCTTTTAAATTATGTATGTTTTGAAGACAATAAAAAGTGATACATGCATGTACTCATTTCAATTACTTTGGGCTTGTTTAATTTACAATTGGGAAGTTTATGTAATTTATTCGGTCAATTAAGTAAAAATGTAATTTTTCTTATTAAACACCTTGATCAGAGGTATCTATATTAAGATAAAACAGAACCCTAG ATGGAGGAAGAAAGCCAATTAAACACAGTGCCTAAATACTTCACTATCAAATCGAGGCTAAATGGCCGATATCTTCGCTACATTAACGACGATAAGATCATGCATGGATTTCTCAAGTTCTCTGGAACTCATGTGGTTAACCCATTCTCAAAGTTTGAAGTTGAAAAGGCTAAAGAGAAATCTAACAAAGGTCTTGTTCATATCAGGTGTTGTTACAACAACAAATATTGGGTTCGTTGGTCGGCAAAATCCAAGTACATTGTCGCAACGGCAAACGAACCCGACGAAGACCGAACAAAGTTCTCATCAACATTGTTCAAACCCATCTACGACGACGATCAAAAGGTGTTCCGTTTCAAACACGTGCAACTCGACCGATATGTTCAGCTACGACAACACATTGCGAGGCAGTTCCAAGACGCTCTGTTCGCCGACAGCTCGGGATTCGAACACGACGAATCAGATCTCTTAACAGTGGTGGATTGGTCCACCTTATTCGTACTTCCAAAACATGTAGCATTCAAGGGTGACAATGGGAATTATCTCAATGTCCATTCTTCTGGGACTAAATACTTGGAGTTTTCAGGATCCGATGTGGGCGATCCAAGAGTTGGCAACCAAATCTTCACCACTTCAGATGGACATGTAAGGATTAAGAACGATTATTTGGGGAAATTTTGGATTCGTGATCCTAATTGGATTCATGTGAAAGCCAGTGAAAGTGATTTTGATGATCCAAATACTCTGTTTTGGGCTGTTGGGCTTGGCGATGGTCATGGCGTAGCGCTTCGAAACAGAGGAAATGATAGGTTCTGTAAGAGGCTGAGTACGGAGGGGAAGGATAATTGTTTGAATGCTGCTGATACCAGCATCAGTGCTGAGGCTAAGCTTCAGATTGAAGAACTTGTCATTTCTAGAACCATTTACGATGTCAATTTTCGCGTTTTAGATGCCCGATTCTACGACGAGACCCCCATGACTATGATATCTAAAGAGATGGTGAACAGGAACAGCGAAGCGGAGGTGCAAAAGCTGAAGCTTCGGTATGACGATACAAAGTCGTCGACGTGGACGAACTCGGTGGGGATGAAGTTAGGGATGAAAATGTCAATTGAAACAGGAAGTCCAGAGATATCAAGCCAAGAAGTAGAAATTTCAGCTGAGTTCAGAGAAGAAGTAACATGGGGAGAAACAAAAGAAACAAAGTCTAGAAGGGAAGTGGAGCATCAAGTGACAGTACCAGCTAACACTCGAGTGACAGCCAAAGTGTTAGCCACTAAAGGATTTTGTGACATTCCATATTCTTACACTCAAAGAGATGTTCTAACCAATGGCAAAGTTGTAATTCAACACTTTGATGATGGGGTTTACATTGGAAGCAATTGCTATAACTACACCTTTGTCACTGAACAACAAGATCTTTGA MEEESQLNTVPKYFTIKSRLNGRYLRYINDDKIMHGFLKFSGTHVVNPFSKFEVEKAKEKSNKGLVHIRCCYNNKYWVRWSAKSKYIVATANEPDEDRTKFSSTLFKPIYDDDQKVFRFKHVQLDRYVQLRQHIARQFQDALFADSSGFEHDESDLLTVVDWSTLFVLPKHVAFKGDNGNYLNVHSSGTKYLEFSGSDVGDPRVGNQIFTTSDGHVRIKNDYLGKFWIRDPNWIHVKASESDFDDPNTLFWAVGLGDGHGVALRNRGNDRFCKRLSTEGKDNCLNAADTSISAEAKLQIEELVISRTIYDVNFRVLDARFYDETPMTMISKEMVNRNSEAEVQKLKLRYDDTKSSTWTNSVGMKLGMKMSIETGSPEISSQEVEISAEFREEVTWGETKETKSRREVEHQVTVPANTRVTAKVLATKGFCDIPYSYTQRDVLTNGKVVIQHFDDGVYIGSNCYNYTFVTEQQDL
BLAST of Lsi09G018330 vs. TrEMBL
Match: A0A0A0KBV4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G085110 PE=4 SV=1) HSP 1 Score: 882.9 bits (2280), Expect = 1.8e-253 Identity = 425/474 (89.66%), Postives = 451/474 (95.15%), Query Frame = 1
BLAST of Lsi09G018330 vs. TrEMBL
Match: A0A0A0KEX2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G084600 PE=4 SV=1) HSP 1 Score: 832.0 bits (2148), Expect = 3.6e-238 Identity = 402/475 (84.63%), Postives = 437/475 (92.00%), Query Frame = 1
BLAST of Lsi09G018330 vs. TrEMBL
Match: A0A0A0KD71_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G086130 PE=4 SV=1) HSP 1 Score: 767.3 bits (1980), Expect = 1.1e-218 Identity = 377/476 (79.20%), Postives = 416/476 (87.39%), Query Frame = 1
BLAST of Lsi09G018330 vs. TrEMBL
Match: F6HZZ6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g06090 PE=4 SV=1) HSP 1 Score: 517.7 bits (1332), Expect = 1.5e-143 Identity = 245/467 (52.46%), Postives = 345/467 (73.88%), Query Frame = 1
BLAST of Lsi09G018330 vs. TrEMBL
Match: F6HZZ7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g06110 PE=4 SV=1) HSP 1 Score: 502.3 bits (1292), Expect = 6.5e-139 Identity = 241/467 (51.61%), Postives = 338/467 (72.38%), Query Frame = 1
BLAST of Lsi09G018330 vs. NCBI nr
Match: gi|659120115|ref|XP_008460021.1| (PREDICTED: uncharacterized protein LOC103498960 [Cucumis melo]) HSP 1 Score: 895.2 bits (2312), Expect = 5.0e-257 Identity = 432/474 (91.14%), Postives = 454/474 (95.78%), Query Frame = 1
BLAST of Lsi09G018330 vs. NCBI nr
Match: gi|778711472|ref|XP_004140598.2| (PREDICTED: uncharacterized protein LOC101212067 [Cucumis sativus]) HSP 1 Score: 882.9 bits (2280), Expect = 2.5e-253 Identity = 425/474 (89.66%), Postives = 451/474 (95.15%), Query Frame = 1
BLAST of Lsi09G018330 vs. NCBI nr
Match: gi|778711463|ref|XP_004140599.2| (PREDICTED: uncharacterized protein LOC101212310 [Cucumis sativus]) HSP 1 Score: 832.0 bits (2148), Expect = 5.2e-238 Identity = 402/475 (84.63%), Postives = 437/475 (92.00%), Query Frame = 1
BLAST of Lsi09G018330 vs. NCBI nr
Match: gi|700191128|gb|KGN46332.1| (hypothetical protein Csa_6G086130 [Cucumis sativus]) HSP 1 Score: 767.3 bits (1980), Expect = 1.6e-218 Identity = 377/476 (79.20%), Postives = 416/476 (87.39%), Query Frame = 1
BLAST of Lsi09G018330 vs. NCBI nr
Match: gi|225465425|ref|XP_002264858.1| (PREDICTED: uncharacterized protein LOC100241465 [Vitis vinifera]) HSP 1 Score: 517.7 bits (1332), Expect = 2.2e-143 Identity = 245/467 (52.46%), Postives = 345/467 (73.88%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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