Lsi09G018200 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi09G018200
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionReduced male fertility protein
Locationchr09 : 27009916 .. 27014154 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGAAGAAACTGAGCATTGCCTCAGCGCGAGATCGAGTGGTTACGAGATCTCAATCCATTGCCATGGAGCGTGCAAAAATGTTGAAGCGATCATCGCCAAATTCAGTTGTTGCTGCAGAGCCGGAAGGATTGGTAAAGCGAATGCGAAGGGATATTAAGCCGATTCATTCTTGCAGCTCTCCTCGTTCCGCTTTTCTTACTGCGCATTCTTCTGCTTCATCCTCTGCATCTTCGTCTTCCTGCTGGTTCGTTCTCTTCCTCTGATAGTCGCTGTTCGTAGGTAATTTCAGTTCTGATACGAGTTTCGCGCCTAAATACGTGTCTGCCAGTTGAGATAAATGCCTATGTGTTTTCTAGCACCGTGATAATCAGGAAATTCAAATTTGATTTTCTAGAAGTGATTGAATTACTTAGTTCACAAAATTGAGACGTGAAGTTATTTCCTCGACTTTAAGCTCTCTGAGCTCGATTCTGTAATCGCATTTGTTTAGTACCGCTAAGGACTTTGAAGTAGAAAGAAATAAACAATTCGAGTTGTTTCTATGAGATTTGGAACCTCAAAGTGAACTTCTGCAGAGATTTATCTTAGCAGAATAAACTTGTTCGTTTTCTCCATCAGGAGAAGACGATGAAGAAGAAACGTTTGGCCATGTGATTTTAGGATTTGCAAACTGAATGTGACAATCTTTGTTGAAAACCACTACGCGTTGATAAAAACTTCATGGAGCTCTAGAAAATTTGATCGTAAGTACATTATGTAATATAATTAGTATTGCCAATTCTTCAGTATAGTTTGATTTTTTACTTCTCGCAAGGATCGAAGGAGTTTCAGGACTCTTTCTATCTATAGCTAGTTCAGTAATTACATTTCATACATTTTATCACATTAAGTATTGCGAGTCCCTTGGTTTTCTTTTCTACTTCATCATTTACTTTTCTATGTATTGATTATTGGCTCTACCTATAAGTTTTCAAAAACGCGATTGTTCTATCTTTTACATATTCAATTTTAAATCAGTTATCATTTCAGTTTCAGTAATCGAAAGTTCATATGTTTATTCAGTAATAAGTCTGGCTTAAGTTTGGTTGATCGGGATTAAGATTGATGAATCATAGAAATTATAAATTGTTTCTATCAGTTTGAATATTTCATCCGAAACAAAGTTGAGGATCAATTTATAATTTAACCTTCCGTATGACAATTTTTGTGAATAAACATGAAAGGTACGACGCGGACGTTTGGACAGAGGTTGCGAAGTTTCTGGATGGAAAATCTTTGATGATGCTTGCGGCGACTAGCCGGTGGTTTTATCGTTTAGTCATGGAAGACAGCATATGGAAGTATGTTTGCCTGCGTGATCTCCAGGTCCCTGCCCCTCAACATACGGCCTTCAAATGGATCAAACTTTACGTTTCTGCCTTCGGTAAGGATCGGATTCGAGTTCTCCGAGTTGTATTCCTACTCTGGTGAATACTTATTGCGTTTGCTTAACCATTCAATGACCCGTGTTCCAGACGGAAGTCACTCTTACATTTTCCGGCAGCAGGAGAAACATCTCGGTGAGTGATTGTGATTCCACTTGACTCCTTTAAAGTAATTTGGCGTCCGGTTGTACTTAACTACAACTAAATGTCAAGAACCTGTTTAGCCACGGCTACTGTCCAATCTTATTATCAGTTTATCAAATCTTACCTAATAACTGGTGTCAAGTCATTATATACTGCTACTTTCCGTCCTCATGTATAAAATAGATATTTAGAGTAAACTGTAGTTTGCTTCGTTACCACATCGTTTATTTATTTTAATGAAACCAGATTGGATGCGGATCGGGGCATTTTTCCTAGATTCTTCAGTAGCACTCCTGTCAGAAAGGCTAGGCTCCCAAATGAAAATCCCAAAACAGGATTCAACGGATAACACATTGGAGTCTGGTTGTTGTGTCTTGCACAATGTTAAAACTGGGATCTGGATAGCTGGTATCAAGCTTGCTAAATGTTTTTGACATTTTCTTTCAGTTGTTGTTATAACTTGAGACTCCTATTAACCTTTTCTTATGTAAATTTATATTCTACATGGACTAATGTGGCAGATCTACAACTTGTTCGTTGTCCCGTTTGCGACCTGAATACATGTGATGGTAGGCATCCAAGTAAACATTTGTATCCCACAAAAATGTAGGAACCTCTTTTTATGTTAGTTGTTGCAAGATCTTAGCCTGCAGCTGTACCGTTCTAGTACTTGGTATGCTACACTGCGTTTAAAATTCAAATTTCATTGAAAATTAATTTGATTTTGATTTCCAATACCTTAGGAAAGTAGATGATACTGAGCACATGCCCTAATCATCTGCTAATCAGCATTAATTCATTGCTGATAGAAGGGTTTTAACACATCCAAACAAGAATTCAATCTGTAAAAATATTTGTATTTCAAAATTTTAAACAGTGGATGTATAGCTGCAGAAAGTTATCTACAATTTGTTGGCTCTTGCTGACCTTGCTACATTATTATGTAGGAACAATGCAAACGTTGGATGCCAGGCACATAGAGCTGTTCCTGAATGAAGGTTACCAAGATGGTAGTTGGGAGTATCAGATTGTAGGTTCTCATGATATCAGGAAGCCTACAGAGTCGGCTTCAGGGGCCATTTTTGATGTCAAGCACCTGAAAGACTCTTCAACCTCAGGTATAACACAGCCTCCCTATACTAAAATATTATTGTCTTATTATTACTGCTAGATCCTTCTGAAAATTATTGCTGTAAGATCTTTTCTTTCTGTACCATTGCACAATCAGGAATAGTATATTATTTACTCAAGTTTAATAATTTAGGTACTATCCATGAAACGTAATTTTAGTACGCTATATTACTCAATGAAATTCTTTAATTATTTATCCCGTTTGAAGAAAATACTGTGCACTCTTAGCTACAAATTGTAGACCATGGAAGGAATACTCTTAATTCTTTCTTTAGCTGAAAATTATAATTATATATGGTGCAAGCTATTTCAGAATCTGTTTAGAACACACTAAATTTCTATACTTAGCTAAGCCTAGTGGTTTAACATGTTACAAATACACAACACAAGATCTGCGTTCAAATTTCTACAAGAGATATTGAGCTAATTCAGGAGATTCAATAATTATGAACTATATGGTGAGATTTTTCCCAAATGAATTGACAGGAATACTGGATCTGAAGTCATGGACGGGAAATCAAACTGATTGGCAACCAAAGGCAATGATTACTCTCAACGCAGTTGCCGTAAATACCTATTTACAAGACAATGAAGGTAAATCGCCTCCAGTTTTATATGATATTCAAAACGGTGAAAAGTACTTCTAATCGTTTAGAAAGCATTCTTTAGAATTTTCAGTCTTAAGTCAACTCGACAGAATGTTCGTTTCTAAAAACACTGCAAATACTTTTAAAGTAATTAGAATTCTATTAAAGATGCATGTAGCAAAACTGTTTTACTCCAAAGTACTCAAAATAAGTGATTTTAGTAAAAATAATTTGATTGCATGCACTTAAATATAAAGTTGGATACAAATGTTAGGTTATATACTATTAAAGTACTTTTGACACGTCCTCTTAACGATCACCTTGGTAAAAAAAAAATCTATTTAAAAGGTGAATCACTTCGAAATATGGTAAATTAAATCATGAAGAAAATTGTTATTAGCCATGTCAAAAACACTCCTAACAATACTTTCTACTTATGTACTCATGGCTAAAAGTACTTATAAATCAAATGCCTTAAAGACTTATTTGGATTGACTTTCTAAGTGTTTAAAAAATTTAAGCACTTAAAAAGTCAATCCAAACAATTCATTTGAAACATAAGAAAAAAAAAAACGTTTTTAACCACCTCAATATAGCAGTCCTAAACATAGCTTAACTTCTATTCTCGAATGCGTTAATTATGTATATAGTGTTTGATTGAGATTGAGATGTGATTTTAATTTGGATGGCGAATGCAGGAGTTCACGTGAAATACCAGGCCATGAGAGCCGGAGCAAAGGGAGAGGTGGTTTCTATCAGAATTTCTCAGCAGCTTCTTTAGTTCCTTCTTTTATTATTCCTTCTTCTTCAACCCCAAACAAAACTAAACTCACTATACTTTGAGCCAAATAAGTATAAATACCAACCAAAAACAAAACCAAATAACCATTTTTCAAATTAATACTTTTACTTTGTAACCTTTCTCATTAACAAGTTATGTTTCAAATCA

mRNA sequence

ATGGGGAAGAAACTGAGCATTGCCTCAGCGCGAGATCGAGTGGTTACGAGATCTCAATCCATTGCCATGGAGCGTGCAAAAATGTTGAAGCGATCATCGCCAAATTCAGTTGTTGCTGCAGAGCCGGAAGGATTGGTAAAGCGAATGCGAAGGGATATTAAGCCGATTCATTCTTGCAGCTCTCCTCGTTCCGCTTTTCTTACTGCGCATTCTTCTGCTTCATCCTCTGCATCTTCGTCTTCCTGCTGGTACGACGCGGACGTTTGGACAGAGGTTGCGAAGTTTCTGGATGGAAAATCTTTGATGATGCTTGCGGCGACTAGCCGGTGGTTTTATCGTTTAGTCATGGAAGACAGCATATGGAAGTATGTTTGCCTGCGTGATCTCCAGGTCCCTGCCCCTCAACATACGGCCTTCAAATGGATCAAACTTTACGTTTCTGCCTTCGACGGAAGTCACTCTTACATTTTCCGGCAGCAGGAGAAACATCTCGATTGGATGCGGATCGGGGCATTTTTCCTAGATTCTTCAGTAGCACTCCTGTCAGAAAGGCTAGGCTCCCAAATGAAAATCCCAAAACAGGATTCAACGGATAACACATTGGAGTCTGGTTGTTGTGTCTTGCACAATGTTAAAACTGGGATCTGGATAGCTGGAACAATGCAAACGTTGGATGCCAGGCACATAGAGCTGTTCCTGAATGAAGGTTACCAAGATGGTAGTTGGGAGTATCAGATTGTAGGTTCTCATGATATCAGGAAGCCTACAGAGTCGGCTTCAGGGGCCATTTTTGATGTCAAGCACCTGAAAGACTCTTCAACCTCAGGAGTTCACGTGAAATACCAGGCCATGAGAGCCGGAGCAAAGGGAGAGGTGGTTTCTATCAGAATTTCTCAGCAGCTTCTTTAGTTCCTTCTTTTATTATTCCTTCTTCTTCAACCCCAAACAAAACTAAACTCACTATACTTTGAGCCAAATAAGTATAAATACCAACCAAAAACAAAACCAAATAACCATTTTTCAAATTAATACTTTTACTTTGTAACCTTTCTCATTAACAAGTTATGTTTCAAATCA

Coding sequence (CDS)

ATGGGGAAGAAACTGAGCATTGCCTCAGCGCGAGATCGAGTGGTTACGAGATCTCAATCCATTGCCATGGAGCGTGCAAAAATGTTGAAGCGATCATCGCCAAATTCAGTTGTTGCTGCAGAGCCGGAAGGATTGGTAAAGCGAATGCGAAGGGATATTAAGCCGATTCATTCTTGCAGCTCTCCTCGTTCCGCTTTTCTTACTGCGCATTCTTCTGCTTCATCCTCTGCATCTTCGTCTTCCTGCTGGTACGACGCGGACGTTTGGACAGAGGTTGCGAAGTTTCTGGATGGAAAATCTTTGATGATGCTTGCGGCGACTAGCCGGTGGTTTTATCGTTTAGTCATGGAAGACAGCATATGGAAGTATGTTTGCCTGCGTGATCTCCAGGTCCCTGCCCCTCAACATACGGCCTTCAAATGGATCAAACTTTACGTTTCTGCCTTCGACGGAAGTCACTCTTACATTTTCCGGCAGCAGGAGAAACATCTCGATTGGATGCGGATCGGGGCATTTTTCCTAGATTCTTCAGTAGCACTCCTGTCAGAAAGGCTAGGCTCCCAAATGAAAATCCCAAAACAGGATTCAACGGATAACACATTGGAGTCTGGTTGTTGTGTCTTGCACAATGTTAAAACTGGGATCTGGATAGCTGGAACAATGCAAACGTTGGATGCCAGGCACATAGAGCTGTTCCTGAATGAAGGTTACCAAGATGGTAGTTGGGAGTATCAGATTGTAGGTTCTCATGATATCAGGAAGCCTACAGAGTCGGCTTCAGGGGCCATTTTTGATGTCAAGCACCTGAAAGACTCTTCAACCTCAGGAGTTCACGTGAAATACCAGGCCATGAGAGCCGGAGCAAAGGGAGAGGTGGTTTCTATCAGAATTTCTCAGCAGCTTCTTTAG

Protein sequence

MGKKLSIASARDRVVTRSQSIAMERAKMLKRSSPNSVVAAEPEGLVKRMRRDIKPIHSCSSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGKSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVALLSERLGSQMKIPKQDSTDNTLESGCCVLHNVKTGIWIAGTMQTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLKDSSTSGVHVKYQAMRAGAKGEVVSIRISQQLL
Homology
[Close]
BLAST of Lsi09G018200 vs. Swiss-Prot
Match: FB331_ARATH (Probable F-box protein At3g61730 OS=Arabidopsis thaliana GN=RMF PE=1 SV=2)

HSP 1 Score: 287.3 bits (734), Expect = 1.9e-76
Identity = 150/340 (44.12%), Postives = 209/340 (61.47%), Query Frame = 1 

Query: 25  RAKMLKRSSPNSVVAAEPEGLVKRM---------RRDIKPIHSCSSPRSAFLTAHSSASS 84
           + K+++ +   + +  E +G  KR           + ++ I  C SPR +  T  S  S 
Sbjct: 28  KRKLVQSNEQKNDIQREEDGRAKRRIVQSSDQKNGKILRGIRGCVSPRCSAQTYQSRFS- 87

Query: 85  SASSSSCWYDADVWTEVAKFLDGKSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQ 144
                  WY+ D+WT +++FLDGKSL+ L AT++WFY++ MED++W++ CLRDLQVP P 
Sbjct: 88  -------WYEQDIWTYISRFLDGKSLVKLGATNKWFYKIAMEDTVWRFACLRDLQVPVPF 147

Query: 145 HTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVALLSERLGSQMKIPKQD 204
             +  WIK+Y SAFDGSHSY+FRQ+EKH+DWMRIGAF LDS  +LL+E L  ++K P++ 
Sbjct: 148 PVSSTWIKIYASAFDGSHSYLFRQKEKHIDWMRIGAFVLDSRTSLLTESLSGRLKFPREG 207

Query: 205 STDNTLE-SGCCVLHNVKTGIWIA----------------GTMQTLDARHIELFLNEGYQ 264
           + +  L+ SG C+++++K+GIWIA                GTMQTLDARHIELFL+EGY+
Sbjct: 208 TIERMLQSSGSCLINDIKSGIWIADLQLVRCPVCDLSTCDGTMQTLDARHIELFLSEGYK 267

Query: 265 DGSWEYQIVGSHDIRKPTESASGAIFDVKHLKDSSTSG---------------------- 303
           DGSW+Y ++GSH ++K   +A GAIFD+KHLK+SS SG                      
Sbjct: 268 DGSWDYNLIGSHKLQKNASAACGAIFDLKHLKESSYSGILNLKSWTGESNDSQPKAVIAP 327

[Close]
BLAST of Lsi09G018200 vs. Swiss-Prot
Match: FB332_ARATH (Probable F-box protein At5g36000 OS=Arabidopsis thaliana GN=At5g36000 PE=2 SV=2)

HSP 1 Score: 280.0 bits (715), Expect = 3.0e-74
Identity = 141/303 (46.53%), Postives = 190/303 (62.71%), Query Frame = 1 

Query: 53  IKPIHSCSSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGKSLMMLAATSRWFY 112
           ++ IH C SPR +  T  S  S        WY+ D+WT + +FLDGKSL+ L AT++WFY
Sbjct: 61  LRGIHGCVSPRCSAPTYQSRFS--------WYEQDIWTYITRFLDGKSLVKLGATNKWFY 120

Query: 113 RLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAF 172
           ++ MED++W++ CLRDLQVP     +  WIK+Y SAFDGSHSY+F Q+EKH+DWMR+GAF
Sbjct: 121 KIAMEDTVWRFACLRDLQVPETFPVSSTWIKIYASAFDGSHSYLFHQKEKHIDWMRLGAF 180

Query: 173 FLDSSVALLSERLGSQMKIPKQDSTDNTLE-SGCCVLHNVKTGIWIA------------- 232
            LDS  + L+E L  ++K+P + + +  L+ SG C+++++K+GIWIA             
Sbjct: 181 VLDSRTSFLTESLSGRLKVPTEGTIEQMLQSSGSCLINDIKSGIWIADLQLLRCPLCDLS 240

Query: 233 ---GTMQTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLKDSSTS 292
              GTMQTLD RHIELFL+EGY+DGSW+Y ++GSH + K   +A GAIFD+KHLK SS+S
Sbjct: 241 TCDGTMQTLDVRHIELFLSEGYKDGSWDYNLIGSHKLEKDASAACGAIFDLKHLKKSSSS 300

Query: 293 G--------------------------VH----------VKYQAMRAGAKGEVVSIRISQ 303
           G                          VH          VKY  M+AG  G++VSIRISQ
Sbjct: 301 GILNLKSWTGEADDSQPKAVIAPHAVAVHTRLQQNEGILVKYHTMKAGTDGDIVSIRISQ 355

[Close]
BLAST of Lsi09G018200 vs. TrEMBL
Match: A0A0A0KD88_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G087760 PE=4 SV=1)

HSP 1 Score: 551.2 bits (1419), Expect = 7.8e-154
Identity = 293/355 (82.54%), Postives = 297/355 (83.66%), Query Frame = 1 

Query: 1   MGKKLSIASARDRVVTRSQSIAMERAKMLKRSSP-NSVVAAEPEGLVKRMRRDIKPIHSC 60
           MGKKLSIASARDRVVTRSQSI+MERAKM KRSSP N VVAAEPEG+VKRMRRDIKPIHSC
Sbjct: 1   MGKKLSIASARDRVVTRSQSISMERAKMTKRSSPKNPVVAAEPEGMVKRMRRDIKPIHSC 60

Query: 61  SSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGKSLMMLAATSRWFYRLVMEDS 120
           SSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDG+SLMMLAATSRWFYR VMEDS
Sbjct: 61  SSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRSVMEDS 120

Query: 121 IWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVA 180
           IWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQ EKHLDWMRIGAFFLDSSVA
Sbjct: 121 IWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSVA 180

Query: 181 LLSERLGSQMKIPKQDSTDNTLESGCCVLHNVKTGIWIA----------------GTMQT 240
           LLSERLGSQMKIPKQDSTDNTLESGCCVLHNVKTGIWIA                GTMQT
Sbjct: 181 LLSERLGSQMKIPKQDSTDNTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQT 240

Query: 241 LDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLKDSSTS-------- 300
           LDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHL+DSSTS        
Sbjct: 241 LDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLEDSSTSGLLDLKSW 300

Query: 301 ----------------------------GVHVKYQAMRAGAKGEVVSIRISQQLL 303
                                       GVHVKYQAMRAGA GEVVSIRISQQLL
Sbjct: 301 TGNRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 355

[Close]
BLAST of Lsi09G018200 vs. TrEMBL
Match: A0A0R0FUX3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_16G025000 PE=4 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 2.6e-88
Identity = 180/309 (58.25%), Postives = 210/309 (67.96%), Query Frame = 1 

Query: 47  KRMRRDIKPIHSCSSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGKSLMMLAA 106
           KR+RR  K I SC+SPR  FL+AHS+ S        W++ D+WTE+AKFLDGKSL+MLAA
Sbjct: 19  KRIRRS-KTICSCNSPRPPFLSAHSTFS--------WFEEDIWTEIAKFLDGKSLVMLAA 78

Query: 107 TSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDW 166
           TSRWF R +M+D IWK+VCLRDLQVP P+  AF+W KLY S FDGSHSY+FRQQEKH+DW
Sbjct: 79  TSRWFRRAIMDDGIWKFVCLRDLQVPPPECVAFRWCKLYTSTFDGSHSYMFRQQEKHIDW 138

Query: 167 MRIGAFFLDSSVALLSERLGSQMKIPKQDSTDNTLES-GCCVLHNVKTGIWIA------- 226
           MRIGAF  DSSVA+L+ERL    KI   ++ +  L S GCCVL NVKTGIWIA       
Sbjct: 139 MRIGAFSFDSSVAVLAERLILPGKIRNGETMEKMLRSQGCCVLDNVKTGIWIADLQLVRC 198

Query: 227 ---------GTMQTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHL 286
                    GTMQTLDARHIELFL EG+Q+GSW+YQ+VGS DI+K  + A+GAIFD+KHL
Sbjct: 199 PVCDLNTCDGTMQTLDARHIELFLCEGFQNGSWDYQLVGSRDIKKRADGAAGAIFDMKHL 258

Query: 287 KDSSTS------------------------------------GVHVKYQAMRAGAKGEVV 303
           KDSSTS                                    G+HVKY AMRAGA GEVV
Sbjct: 259 KDSSTSAVFDYKSWIGRANDWQPKAMIAFHAVAVNTNLQENEGLHVKYHAMRAGADGEVV 318

[Close]
BLAST of Lsi09G018200 vs. TrEMBL
Match: A0A0B2Q811_GLYSO (Putative F-box protein OS=Glycine soja GN=glysoja_013153 PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 2.2e-87
Identity = 179/309 (57.93%), Postives = 209/309 (67.64%), Query Frame = 1 

Query: 47  KRMRRDIKPIHSCSSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGKSLMMLAA 106
           KR+RR  K I SC+SPR  FL+AHS+ S        W++ D+WTE+AK LDGKSL+MLAA
Sbjct: 19  KRIRRS-KTICSCNSPRPPFLSAHSTFS--------WFEEDIWTEIAKSLDGKSLVMLAA 78

Query: 107 TSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDW 166
           TSRWF R +M+D IWK+VCLRDLQVP P+  AF+W KLY S FDGSHSY+FRQQEKH+DW
Sbjct: 79  TSRWFRRAIMDDGIWKFVCLRDLQVPPPECVAFRWCKLYTSTFDGSHSYMFRQQEKHIDW 138

Query: 167 MRIGAFFLDSSVALLSERLGSQMKIPKQDSTDNTLES-GCCVLHNVKTGIWIA------- 226
           MRIGAF  DSSVA+L+ERL    KI   ++ +  L S GCCVL NVKTGIWIA       
Sbjct: 139 MRIGAFSFDSSVAVLAERLILPGKIRNGETMEKMLRSQGCCVLDNVKTGIWIADLQLVRC 198

Query: 227 ---------GTMQTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHL 286
                    GTMQTLDARHIELFL EG+Q+GSW+YQ+VGS DI+K  + A+GAIFD+KHL
Sbjct: 199 PVCDLNTCDGTMQTLDARHIELFLCEGFQNGSWDYQLVGSRDIKKRADGAAGAIFDMKHL 258

Query: 287 KDSSTS------------------------------------GVHVKYQAMRAGAKGEVV 303
           KDSSTS                                    G+HVKY AMRAGA GEVV
Sbjct: 259 KDSSTSAVFDYKSWIGRANDWQPKAMIAFHAVAVNTNLQENEGLHVKYHAMRAGADGEVV 318

[Close]
BLAST of Lsi09G018200 vs. TrEMBL
Match: M5X6Y2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb007280mg PE=4 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 2.8e-87
Identity = 179/318 (56.29%), Postives = 210/318 (66.04%), Query Frame = 1 

Query: 37  VVAAEPEGLVKRMRRDIKPIHSCSSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFL 96
           V   +P  + KRMRR  K I SCSSPR           +SA S+ CWY+ DVWTE+AK+L
Sbjct: 9   VTQPQPPQMQKRMRRT-KTICSCSSPRFT--------DNSAGSAFCWYEEDVWTEIAKYL 68

Query: 97  DGKSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYI 156
           DGKSL+MLA T  WF+ L+ME SIWKY CLRDLQVPAP H AF W  LYVSAFDGSHSY+
Sbjct: 69  DGKSLVMLATTCCWFHGLIMEGSIWKYACLRDLQVPAPLHVAFNWRNLYVSAFDGSHSYM 128

Query: 157 FRQQEKHLDWMRIGAFFLDSSVALLSERLGSQMKIPKQDSTDNTLES-GCCVLHNVKTGI 216
           FRQ+EKH+DWMRIGAF ++SS ALL+ERL +  K+P++D+    LE+ G CVL NVK GI
Sbjct: 129 FRQKEKHIDWMRIGAFSVESSEALLTERLRNPTKLPEEDTMQKMLEACGYCVLDNVKAGI 188

Query: 217 WIA----------------GTMQTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESA 276
           WIA                GTMQTLDARHIELFL+EGYQ+GSWEY+ +GSHD++K  + A
Sbjct: 189 WIADLQLVRCPVCELNTCDGTMQTLDARHIELFLSEGYQNGSWEYEHIGSHDVKKHVDGA 248

Query: 277 SGAIFDVKHLKDSSTS-----------------------------------GVHVKYQAM 303
           SGAIFD+KHL DS TS                                   G+ VKYQ M
Sbjct: 249 SGAIFDLKHLNDSPTSVFNLKSWVGKPNDWQPKAIITLHSVAVNTNLQKNEGLQVKYQVM 308

[Close]
BLAST of Lsi09G018200 vs. TrEMBL
Match: D7UCQ1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0046g00900 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 3.5e-85
Identity = 167/309 (54.05%), Postives = 205/309 (66.34%), Query Frame = 1 

Query: 47  KRMRRDIKPIHSCSSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGKSLMMLAA 106
           KRMRR+ K I  C+SP + F                WY+ D+WTE+AK LDGKSL+ML  
Sbjct: 3   KRMRRE-KSICCCNSPLAGF---------------SWYEEDIWTEIAKHLDGKSLVMLGT 62

Query: 107 TSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDW 166
            ++WF+ L+MEDSIWK+ CLRDLQ+P PQHT   WIKLY SAFDGSHS++FRQ+EKH+DW
Sbjct: 63  KNKWFHCLIMEDSIWKFACLRDLQLPEPQHTFLNWIKLYASAFDGSHSFMFRQREKHIDW 122

Query: 167 MRIGAFFLDSSVALLSERLGSQMKIPKQDSTDNTLES-GCCVLHNVKTGIWIA------- 226
           MRIGAFFLDS ++LL+E+L   +KIP+ ++   TLES G C+L+N+KTGIWIA       
Sbjct: 123 MRIGAFFLDSPISLLAEKLSCPLKIPQGENLGKTLESCGFCILNNIKTGIWIADLQLVRC 182

Query: 227 ---------GTMQTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHL 286
                    GTMQTLDARHIELFL+EGY+DGSWEY+I+GSHDI+K  + AS  IFD+KHL
Sbjct: 183 PVCDLNTCDGTMQTLDARHIELFLSEGYRDGSWEYRIIGSHDIKKHADGASAGIFDIKHL 242

Query: 287 KDSSTS------------------------------------GVHVKYQAMRAGAKGEVV 303
            DSSTS                                    G+HVKYQAM+AG  GEVV
Sbjct: 243 NDSSTSEIFNLKSWVGKPNDWQPKAMITLHAVAINTNLQENEGLHVKYQAMKAGPDGEVV 295

[Close]
BLAST of Lsi09G018200 vs. TAIR10
Match: AT5G36000.1 (AT5G36000.1 BEST Arabidopsis thaliana protein match is: reduced male fertility (TAIR:AT3G61730.1))

HSP 1 Score: 280.0 bits (715), Expect = 1.7e-75
Identity = 141/303 (46.53%), Postives = 190/303 (62.71%), Query Frame = 1 

Query: 53  IKPIHSCSSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGKSLMMLAATSRWFY 112
           ++ IH C SPR +  T  S  S        WY+ D+WT + +FLDGKSL+ L AT++WFY
Sbjct: 61  LRGIHGCVSPRCSAPTYQSRFS--------WYEQDIWTYITRFLDGKSLVKLGATNKWFY 120

Query: 113 RLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAF 172
           ++ MED++W++ CLRDLQVP     +  WIK+Y SAFDGSHSY+F Q+EKH+DWMR+GAF
Sbjct: 121 KIAMEDTVWRFACLRDLQVPETFPVSSTWIKIYASAFDGSHSYLFHQKEKHIDWMRLGAF 180

Query: 173 FLDSSVALLSERLGSQMKIPKQDSTDNTLE-SGCCVLHNVKTGIWIA------------- 232
            LDS  + L+E L  ++K+P + + +  L+ SG C+++++K+GIWIA             
Sbjct: 181 VLDSRTSFLTESLSGRLKVPTEGTIEQMLQSSGSCLINDIKSGIWIADLQLLRCPLCDLS 240

Query: 233 ---GTMQTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLKDSSTS 292
              GTMQTLD RHIELFL+EGY+DGSW+Y ++GSH + K   +A GAIFD+KHLK SS+S
Sbjct: 241 TCDGTMQTLDVRHIELFLSEGYKDGSWDYNLIGSHKLEKDASAACGAIFDLKHLKKSSSS 300

Query: 293 G--------------------------VH----------VKYQAMRAGAKGEVVSIRISQ 303
           G                          VH          VKY  M+AG  G++VSIRISQ
Sbjct: 301 GILNLKSWTGEADDSQPKAVIAPHAVAVHTRLQQNEGILVKYHTMKAGTDGDIVSIRISQ 355

[Close]
BLAST of Lsi09G018200 vs. TAIR10
Match: AT3G61730.1 (AT3G61730.1 reduced male fertility)

HSP 1 Score: 270.0 bits (689), Expect = 1.8e-72
Identity = 146/340 (42.94%), Postives = 204/340 (60.00%), Query Frame = 1 

Query: 25  RAKMLKRSSPNSVVAAEPEGLVKRM---------RRDIKPIHSCSSPRSAFLTAHSSASS 84
           + K+++ +   + +  E +G  KR           + ++ I  C SPR +  T  S  S 
Sbjct: 28  KRKLVQSNEQKNDIQREEDGRAKRRIVQSSDQKNGKILRGIRGCVSPRCSAQTYQSRFS- 87

Query: 85  SASSSSCWYDADVWTEVAKFLDGKSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQ 144
                  WY+ D+WT +++FLDGKSL+ L AT++WFY++ MED++W++ CLRDLQVP P 
Sbjct: 88  -------WYEQDIWTYISRFLDGKSLVKLGATNKWFYKIAMEDTVWRFACLRDLQVPVPF 147

Query: 145 HTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVALLSERLGSQMKIPKQD 204
             +  WIK+Y SAFDGSHSY+FRQ+EKH     IGAF LDS  +LL+E L  ++K P++ 
Sbjct: 148 PVSSTWIKIYASAFDGSHSYLFRQKEKH-----IGAFVLDSRTSLLTESLSGRLKFPREG 207

Query: 205 STDNTLE-SGCCVLHNVKTGIWIA----------------GTMQTLDARHIELFLNEGYQ 264
           + +  L+ SG C+++++K+GIWIA                GTMQTLDARHIELFL+EGY+
Sbjct: 208 TIERMLQSSGSCLINDIKSGIWIADLQLVRCPVCDLSTCDGTMQTLDARHIELFLSEGYK 267

Query: 265 DGSWEYQIVGSHDIRKPTESASGAIFDVKHLKDSSTSG---------------------- 303
           DGSW+Y ++GSH ++K   +A GAIFD+KHLK+SS SG                      
Sbjct: 268 DGSWDYNLIGSHKLQKNASAACGAIFDLKHLKESSYSGILNLKSWTGESNDSQPKAVIAP 327

[Close]
BLAST of Lsi09G018200 vs. TAIR10
Match: AT3G62500.1 (AT3G62500.1 BEST Arabidopsis thaliana protein match is: SET domain protein 14 (TAIR:AT3G61740.1))

HSP 1 Score: 122.5 bits (306), Expect = 4.5e-28
Identity = 58/113 (51.33%), Postives = 81/113 (71.68%), Query Frame = 1 

Query: 165 DWMRIGAFFLDSSVALLSERLGSQMKIPKQDSTDNTLESGCCVLHNVKTGIWIAGTMQTL 224
           DWM IGAF LDS  +LL+E L  ++K+PK+ + +  L+    ++  V        TMQTL
Sbjct: 178 DWMPIGAFVLDSRTSLLTESLSGRLKVPKEGTIERMLQKYLQLVRPVCD----LRTMQTL 237

Query: 225 DARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLKDSSTSGV 278
           DARHIELFL+EGY+DGSW+Y ++GSH ++K   +A GAIFD+KH K+SS+SG+
Sbjct: 238 DARHIELFLSEGYKDGSWDYNLIGSHKLQKNASAACGAIFDLKHHKESSSSGI 286

[Close]
BLAST of Lsi09G018200 vs. NCBI nr
Match: gi|449445830|ref|XP_004140675.1| (PREDICTED: probable F-box protein At3g61730 [Cucumis sativus])

HSP 1 Score: 551.2 bits (1419), Expect = 1.1e-153
Identity = 293/355 (82.54%), Postives = 297/355 (83.66%), Query Frame = 1 

Query: 1   MGKKLSIASARDRVVTRSQSIAMERAKMLKRSSP-NSVVAAEPEGLVKRMRRDIKPIHSC 60
           MGKKLSIASARDRVVTRSQSI+MERAKM KRSSP N VVAAEPEG+VKRMRRDIKPIHSC
Sbjct: 1   MGKKLSIASARDRVVTRSQSISMERAKMTKRSSPKNPVVAAEPEGMVKRMRRDIKPIHSC 60

Query: 61  SSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGKSLMMLAATSRWFYRLVMEDS 120
           SSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDG+SLMMLAATSRWFYR VMEDS
Sbjct: 61  SSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRSVMEDS 120

Query: 121 IWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVA 180
           IWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQ EKHLDWMRIGAFFLDSSVA
Sbjct: 121 IWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSVA 180

Query: 181 LLSERLGSQMKIPKQDSTDNTLESGCCVLHNVKTGIWIA----------------GTMQT 240
           LLSERLGSQMKIPKQDSTDNTLESGCCVLHNVKTGIWIA                GTMQT
Sbjct: 181 LLSERLGSQMKIPKQDSTDNTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQT 240

Query: 241 LDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLKDSSTS-------- 300
           LDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHL+DSSTS        
Sbjct: 241 LDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLEDSSTSGLLDLKSW 300

Query: 301 ----------------------------GVHVKYQAMRAGAKGEVVSIRISQQLL 303
                                       GVHVKYQAMRAGA GEVVSIRISQQLL
Sbjct: 301 TGNRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 355

[Close]
BLAST of Lsi09G018200 vs. NCBI nr
Match: gi|659120074|ref|XP_008459999.1| (PREDICTED: probable F-box protein At3g61730 [Cucumis melo])

HSP 1 Score: 509.2 bits (1310), Expect = 4.9e-141
Identity = 269/334 (80.54%), Postives = 273/334 (81.74%), Query Frame = 1 

Query: 23  MERAKMLKRSSP--NSVVAAEPEGLVKRMRRDIKPIHSCSSPRSAFLTAHSSASSSASSS 82
           MERAKM KRSSP  N VVAAEPEG+VKRMRRDIKPIHSCSSP SAFLTAHSSASSSASSS
Sbjct: 1   MERAKMSKRSSPKNNPVVAAEPEGMVKRMRRDIKPIHSCSSPHSAFLTAHSSASSSASSS 60

Query: 83  SCWYDADVWTEVAKFLDGKSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFK 142
           SCWYDADVWTEVAKFLDG+SLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFK
Sbjct: 61  SCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFK 120

Query: 143 WIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVALLSERLGSQMKIPKQDSTDNT 202
           WIKLYVSAFDGSHSYIFRQ EKHLDWMRIGAFFLDSSVALLSERLGSQMK+PKQ ST NT
Sbjct: 121 WIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSVALLSERLGSQMKVPKQGSTANT 180

Query: 203 LESGCCVLHNVKTGIWIA----------------GTMQTLDARHIELFLNEGYQDGSWEY 262
           LESGCCVLHNVKTGIWIA                GTMQTLDARHIELFLNEGYQDGSWEY
Sbjct: 181 LESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEY 240

Query: 263 QIVGSHDIRKPTESASGAIFDVKHLKDSSTS----------------------------- 303
           QIVGSHDIRKPTESASGAIFDVKHL+DSSTS                             
Sbjct: 241 QIVGSHDIRKPTESASGAIFDVKHLEDSSTSGILDLKSWTGSRADWQPKAMITLSAVAVN 300

[Close]
BLAST of Lsi09G018200 vs. NCBI nr
Match: gi|1009142532|ref|XP_015888772.1| (PREDICTED: probable F-box protein At3g61730 [Ziziphus jujuba])

HSP 1 Score: 333.6 bits (854), Expect = 3.7e-88
Identity = 179/319 (56.11%), Postives = 216/319 (67.71%), Query Frame = 1 

Query: 38  VAAEPEGLVKRMR-RDIKPIHSCSSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFL 97
           +++EP+    R R R  K I SC+SP S FL AHS+          WY+ DVWTE+ KFL
Sbjct: 8   LSSEPQRPQTRRRLRRTKTICSCNSPSSTFLNAHSNFF--------WYEIDVWTEITKFL 67

Query: 98  DGKSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYI 157
           DG+SL+MLAATSRWF+ L+ME+SIWKYVCLRDLQVPAP+  AF WI LY SAFDGSHSY+
Sbjct: 68  DGRSLVMLAATSRWFHGLIMEESIWKYVCLRDLQVPAPRSVAFNWINLYASAFDGSHSYM 127

Query: 158 FRQQEKHLDWMRIGAFFLDSSVALLSERLGSQMKIPKQDSTDNTLES-GCCVLHNVKTGI 217
           FRQ EKH+DWMRIGAF +DSSVALL+E+L + +KI  +D+ +N L+S G C+L+NVK GI
Sbjct: 128 FRQPEKHIDWMRIGAFSIDSSVALLTEKLTAPVKISYEDNIENMLQSHGYCLLNNVKNGI 187

Query: 218 WIA----------------GTMQTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESA 277
           WIA                GTMQTLDARHIELFL+EGY DGSWEY+++GSHDI+K  + A
Sbjct: 188 WIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLSEGYLDGSWEYELIGSHDIKKHADGA 247

Query: 278 SGAIFDVKHLKDSSTS------------------------------------GVHVKYQA 303
           SGAIFDV +LK +STS                                    G+HVKY A
Sbjct: 248 SGAIFDVNYLKATSTSAVFNLSSWIGKQTDWQPKAVITLHAVAVNTNLQKNEGLHVKYHA 307

[Close]
BLAST of Lsi09G018200 vs. NCBI nr
Match: gi|356560274|ref|XP_003548418.1| (PREDICTED: probable F-box protein At3g61730 [Glycine max])

HSP 1 Score: 333.6 bits (854), Expect = 3.7e-88
Identity = 180/309 (58.25%), Postives = 210/309 (67.96%), Query Frame = 1 

Query: 47  KRMRRDIKPIHSCSSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGKSLMMLAA 106
           KR+RR  K I SC+SPR  FL+AHS+ S        W++ D+WTE+AKFLDGKSL+MLAA
Sbjct: 19  KRIRRS-KTICSCNSPRPPFLSAHSTFS--------WFEEDIWTEIAKFLDGKSLVMLAA 78

Query: 107 TSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDW 166
           TSRWF R +M+D IWK+VCLRDLQVP P+  AF+W KLY S FDGSHSY+FRQQEKH+DW
Sbjct: 79  TSRWFRRAIMDDGIWKFVCLRDLQVPPPECVAFRWCKLYTSTFDGSHSYMFRQQEKHIDW 138

Query: 167 MRIGAFFLDSSVALLSERLGSQMKIPKQDSTDNTLES-GCCVLHNVKTGIWIA------- 226
           MRIGAF  DSSVA+L+ERL    KI   ++ +  L S GCCVL NVKTGIWIA       
Sbjct: 139 MRIGAFSFDSSVAVLAERLILPGKIRNGETMEKMLRSQGCCVLDNVKTGIWIADLQLVRC 198

Query: 227 ---------GTMQTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHL 286
                    GTMQTLDARHIELFL EG+Q+GSW+YQ+VGS DI+K  + A+GAIFD+KHL
Sbjct: 199 PVCDLNTCDGTMQTLDARHIELFLCEGFQNGSWDYQLVGSRDIKKRADGAAGAIFDMKHL 258

Query: 287 KDSSTS------------------------------------GVHVKYQAMRAGAKGEVV 303
           KDSSTS                                    G+HVKY AMRAGA GEVV
Sbjct: 259 KDSSTSAVFDYKSWIGRANDWQPKAMIAFHAVAVNTNLQENEGLHVKYHAMRAGADGEVV 318

[Close]
BLAST of Lsi09G018200 vs. NCBI nr
Match: gi|502156898|ref|XP_004510686.1| (PREDICTED: probable F-box protein At3g61730 [Cicer arietinum])

HSP 1 Score: 332.4 bits (851), Expect = 8.2e-88
Identity = 182/331 (54.98%), Postives = 219/331 (66.16%), Query Frame = 1 

Query: 25  RAKMLKRSSPNSVVAAEPEGLVKRMRRDIKPIHSCSSPRSAFLTAHSSASSSASSSSCWY 84
           R ++   +S +S     PE   KR+RR  K I SC+SPR  FL+AHS+ S        W+
Sbjct: 2   RKRLHDATSSSSAGELPPE---KRIRRT-KTICSCNSPRPPFLSAHSTFS--------WF 61

Query: 85  DADVWTEVAKFLDGKSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKL 144
           D D+WTE+AKFLDGKSL+MLA T++WF R +M+D IWK+V LRDLQVP+PQ  AFKW KL
Sbjct: 62  DEDIWTEIAKFLDGKSLIMLATTNKWFRRAIMDDGIWKFVSLRDLQVPSPQRVAFKWSKL 121

Query: 145 YVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVALLSERLGSQMKIPKQDSTDNTLES- 204
           Y SAFDGSHSY FRQQEKH+DWMRIGAF+ DSSVALL+ERL    ++ K++S +  L S 
Sbjct: 122 YTSAFDGSHSYKFRQQEKHIDWMRIGAFYFDSSVALLTERLNFPGELRKEESMEKMLRSH 181

Query: 205 GCCVLHNVKTGIWIA----------------GTMQTLDARHIELFLNEGYQDGSWEYQIV 264
           GCC L N+K GIWIA                GTMQTLDARHIELFL E YQ+GSWEY++V
Sbjct: 182 GCCFLDNIKPGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLCEDYQNGSWEYELV 241

Query: 265 GSHDIRKPTESASGAIFDVKHLKDSSTS-------------------------------- 303
           GSHDI+K  + A+GAIFDVKHL++SSTS                                
Sbjct: 242 GSHDIKKRADGAAGAIFDVKHLENSSTSAVFDYKSWIGKHNDWQPKAMIAFHAVAVNTNL 301

The following BLAST results are available for this feature:
BLAST of Lsi09G018200 vs. Swiss-Prot
Match NameE-valueIdentityDescription
FB331_ARATH1.9e-7644.12Probable F-box protein At3g61730 OS=Arabidopsis thaliana GN=RMF PE=1 SV=2[more]
FB332_ARATH3.0e-7446.53Probable F-box protein At5g36000 OS=Arabidopsis thaliana GN=At5g36000 PE=2 SV=2[more]
BLAST of Lsi09G018200 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KD88_CUCSA7.8e-15482.54Uncharacterized protein OS=Cucumis sativus GN=Csa_6G087760 PE=4 SV=1[more]
A0A0R0FUX3_SOYBN2.6e-8858.25Uncharacterized protein OS=Glycine max GN=GLYMA_16G025000 PE=4 SV=1[more]
A0A0B2Q811_GLYSO2.2e-8757.93Putative F-box protein OS=Glycine soja GN=glysoja_013153 PE=4 SV=1[more]
M5X6Y2_PRUPE2.8e-8756.29Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb007280mg PE=4 SV=1[more]
D7UCQ1_VITVI3.5e-8554.05Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0046g00900 PE=4 SV=... [more]
BLAST of Lsi09G018200 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G36000.11.7e-7546.53 BEST Arabidopsis thaliana protein match is: reduced male fertility (... [more]
AT3G61730.11.8e-7242.94 reduced male fertility[more]
AT3G62500.14.5e-2851.33 BEST Arabidopsis thaliana protein match is: SET domain protein 14 (T... [more]
BLAST of Lsi09G018200 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449445830|ref|XP_004140675.1|1.1e-15382.54PREDICTED: probable F-box protein At3g61730 [Cucumis sativus][more]
gi|659120074|ref|XP_008459999.1|4.9e-14180.54PREDICTED: probable F-box protein At3g61730 [Cucumis melo][more]
gi|1009142532|ref|XP_015888772.1|3.7e-8856.11PREDICTED: probable F-box protein At3g61730 [Ziziphus jujuba][more]
gi|356560274|ref|XP_003548418.1|3.7e-8858.25PREDICTED: probable F-box protein At3g61730 [Glycine max][more]
gi|502156898|ref|XP_004510686.1|8.2e-8854.98PREDICTED: probable F-box protein At3g61730 [Cicer arietinum][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR001810F-box_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi09G018200.1Lsi09G018200.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainunknownSSF81383F-box domaincoord: 87..148
score: 1.11
NoneNo IPR availableGENE3DG3DSA:1.20.1280.50coord: 87..137
score: 2.
NoneNo IPR availablePANTHERPTHR15537FAMILY NOT NAMEDcoord: 56..277
score: 9.4E
NoneNo IPR availablePANTHERPTHR15537:SF3SUBFAMILY NOT NAMEDcoord: 56..277
score: 9.4E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi09G018200Csa6G087760Cucumber (Chinese Long) v2culsiB402
Lsi09G018200CSPI06G06790Wild cucumber (PI 183967)cpilsiB404
Lsi09G018200Cucsa.348650Cucumber (Gy14) v1cgylsiB562
Lsi09G018200Cla007043Watermelon (97103) v1lsiwmB041
Lsi09G018200MELO3C022414Melon (DHL92) v3.5.1lsimeB017
Lsi09G018200ClCG06G001200Watermelon (Charleston Gray)lsiwcgB029
Lsi09G018200MELO3C022415.2Melon (DHL92) v3.6.1lsimedB019
Lsi09G018200Cla97C06G110460Watermelon (97103) v2lsiwmbB026
Lsi09G018200Bhi12G002061Wax gourdlsiwgoB021
Lsi09G018200CsGy6G006790Cucumber (Gy14) v2cgyblsiB366
Lsi09G018200CsaV3_6G007130Cucumber (Chinese Long) v3cuclsiB424
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi09G018200Cucurbita maxima (Rimu)cmalsiB815
Lsi09G018200Cucurbita pepo (Zucchini)cpelsiB253