Lsi09G017180 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi09G017180
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Perchloric acid soluble translation inhibitor protein
Location	chr09 : 25718226 .. 25728484 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTGGTGTGCGGCTCGGACCTTTCACATGCCGGCGTTTGACGTCACTGCACTGCGCTCCAAGACTCCCTTAGCCGTCGGCGTCGGTTGCGCTTCGGTGGCCGGAACCACCTTGTGGCGATCTTNTATTGGTTTCGAAACTTGGAGTTAATTATAGGAGCCCTCTAGAGTACTTTCTTCTTTTGAATCCTTTTGACTTTTAGCTTAAAATAATGTCTTTGATGTTGTACAAATTCCTCTCCATTTTTATTCATTGAAAGTCTTTCATCTGTTAGTTTCTTTAGAGGAGTTCTCTCTATCTACCTTGCCCTTAGGTTATTCTTTGTTTCACTTTTTCTTTTTACCCCTTGGTTAACAAGGACCACATAAATAATAAAGGTTTTAAACAACTACTAGCTACTTAGGATTTAATATATTAGAGTTATTGCTTTGCCAACTAAATATATCTTTATATATGTGTGTGATTTCACAAATTAATCTTTGTTGAGGGTTTCCCTAGGCAGGCCCAGAGCCCGTGGACAGGTAAAAGCCCAAAGGAAACCGAGAGGAGATATAGGGGAACACACGTCCCAAAAGGAAAAAATCAGAGCCGTGGGGTTTGGGTCGACCAACCCTGCCACCTTGAGCGCCAGAAACAATCCCAATATCATCATAGTTACACGTAATCACAACGCAACTATCAGAAAAAGGACATTATAAATAGCCTCATTCGACGATCCTAAAAGGAAGAGTAAGTAATCTCTAGAGGAGAATCCTGACCTTACTTCTTGTATGCTTAGATAAACTATACGCTCCATGTATTAACTTATGCATCAGAGTGTGGTAGGCTAAGCACTACACTAGTGCGAAGATCTCTTATGCATGTCATCTCCAAAAGCGGACTAGACTATGAGAAGCGAGCAGGAGGTGACGCCCACGATAGGCCCACGACGACAAACGCGTGCAAGATTCAAGTGCCAACACTCTTAACAAAATTTGTAATTCCTTCTAAGCCTAGACTTGTTACATTAAATTATTGAAGTCTACCCTTCAAAATTTTAAAAATAATTAATCATCATGGGTGGGCTTAGTGGCAAAAAGGGTCACGAGTTTAATAAAAAAAATGGAAAGAATGAGTTCAATTTATGATAGTCACTTACCTAGACTTTAATATCTTAACTATTTTTTTGATATCCAAGTACACTTAAGTTGGCCCAAACACTACAAATATTAAAAAAGATCAATAATAATTGCAAACAACTTTTTGTTAAGAATTTCAACATTATTGTTGTGTTGTGCCAATAAGTCAATAGAAGATAAATGTTATAGCTGCATAAAATTAAAAGTTGATGCTCTTTTGTGGTCCAAATCCACTCTTCAAAACCCAACGGTAGGGACATTTTCTTCTCTACTTATAATAAGATCGAAACTTTATTCCATCTCTTTAATTATATTTTCACATCTTAAAGATCAAGCACAGAAAGTGATAGCTGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCAAAATTAATCATGATTTTATGTAAATATATCATGTTTGAAAAACTATTTAATTTTTTTTTATCTTTCTTTTATATATATTGAAAAATATGTTGCTAACATGTGGAAATCAAATTTGATATTATATTAAATTATCACTAAATTCACAATTTTAAACCAACGATAATTGACATAGTCTTCCTCTCAAAAGGTTAAAGGTTCGATCTCTTATCTTGCCGTTGTTTTACTTTTAAAAAAAAATAAAAAAAACATTAAAAGTACTCATAATTAAAGGGTTATAGAAGAAAGATGACACTATAATTTAATTAAGTTCTATGGGCCATGATGTCTCATTTTCCATTATTGTAAATTGGACTAACTTGCACTCGTTTTCATTTGCAAGAGACAGATGTAATATTGGCATTGGAGGGAAGGCAAAAATCCACACAATGGAAAATTACAATATTGGGAATTTTTTTCCACCAATACTTTTTAGGATAGGGATGTGGGAGATAAATTCCTTGCCATAACCACTTTTCTAAACCTGATTTTTAAACTATTTATATGTATATTTAATTTTTTTTTAATTAAAATATCAGTAAAAAAAATGGGGATTTTTAAAAATAGAAAAACAAGGGAAACTATTTACACAAAATAGCAAAATTTTTAGATAGTTGTGATAGACGCTGATAGAAGTCTTCTATCAGGGTCTATCAGCAAGAGAAATGATAGAAGTCTATCACTGATAGATGCTTATAGAAATCTATCAATGTCTATCAGTGTTTTTTTTGCTATTTCTGTAAATAGTTTGACATATTTTCTATCTGTGAAAATTTCCCTAAAAAAATCTTTCATATTTTTTAAAATTGAATTGTTTAGACTATCTAGAAAATAGTATAGTATACATAGTCTTTTCTTTTCTCGTTGATTCTTTTAACTTAAAAATAAATAGGAGATAAAGATATTTTCGATTAAGATTCATTGACTATCATGATTCTCTAAATTGAGGAAGTGTTTGATAGGCTGATAATCATATAGGGGCTCTTTGATTAGAAATTTTTTATATACTTAAAAATAATAGATGTTTGAAAATAAAATGTCTAGAAATAAGATTATTAAAATTCATAGATTGTTGTGTTTGGTTATACACCTAAGAATGTTAAATTTCGTGTTGCCTTGATGAACATTTTGGACTTAGACCTAGGGGCCATCCATCGGTTATCTCCATAACAGAAGAATCAAATGGCAAAAATAAGATTAGTATGATTCTTTTTACCTTGAAATTTTTTTTAGAGTATATATAGTATAAATGAGAGTAATATTATTAAATTTTCTCGTGTGAATCTGCATTGAATTCGAGGATCACAATGGGAGTAAAGGCAAGAAACATGTTCCCCATTGTTCCGTGTATGTGGATTTATGTGCGCACGCGTACGCATGTTCATGTACTTGTGCGTCATTGACTTTTTATGTGCCTGCACGTGTGTGCAAATTTAAGATCGAATCCGATTTTTTTTAGTACTCTAATGTTAATGAACAATATCAAAGGAGACAAACTTTGATTCTATTTTTCTCACACTATTTCAGATGCCTTAGATTCACTGTTTTTTCTTCCTTGTGTCACTAATATTAACAAACACTTCTCATTGCCATCTCTGCTTTTTATAGAAGCCCTCCATGTAAGAGACAATATATAAACTTTCCTGTACTAAATGATATGAGTACTGCTCTTATTTATTGTCTCCACAAAGTTCATAGTGTGAACAAACGTATTCCTATGGGAATACTAGGAATTTTACTGAGGCAAATGCTCTTCAAAGTAGAATAGAGTTCAGCAAGCTACAAGTTCACAGATCATAAACATGCAAAAACACAAATGTAAACCAAAGTTAGGTTCATCGTTTTACCTTTTAGTTTATTAAAAAAACGTTGTATGGTATTATAATTCAAAGGTTCTTTTTAATTGACATTACGGTCATTCATATCTATTCTATGAACAAGGCAAGCCAGCATTAACCTGTTGTCTTGCTATCTAATTGAATAGTTGATGAAGAAACAGCAATGAACCTCTAAAAGAATATGCCTTCATGCACAAACACAGGGAGGGAGAGACAGAGAGACTAAATCCTAGACTTCCTGTACAGATTCAGTTATGTCTGCAACTTGTCATCACCTGTTGGAAGAATTTCTATAGTCAGACCTGGAGTTGGCTCCGGGCTTTGTATAAAAAGAGTCAACTGAAGGAACTTCGTTATGTGATGAGGCGATGGCAGAAAGGGGCTGGAAATTTGTATTGCCAACAAACCAGTAGAGAGCCCATTTCAAATTGCAGAGAGTATATTTGAGAGCTTTTGTCCAATACTCTGGTTTGTTGAAGCTTTGCGTGATGGAATAGTTTTCGACCTTGTCGTTCTCAATCCTGCAACATTCGCCGATGACGATCAGAAAGTAATCTAGGTTTTGATGCCAGAATATACAGATAAAGCACAAACAAACAAACTACCATAATGTGCTAAATATTATTACAATTCCAATACATGTACCTGCATGACTTTTCAATCTTAATTCCTTTGTTCAAAATAACCTGGATGGTTTTCAACCAACCACTTAGAATTAGTTAAAAAAGAAAAGCCTATTTCGAGCATCTCCGTGTCCTCTAACATGTTTCTAATGTTGTTTCATACCTTATTTTTGTTGATCATTTTATGTTAAAACATAAAGATGATGCATTTAACAAGCATTATGAGATAAACCCTGTTTATCTCCAGAATGAAACTACTTAATCGAAACTCCATTTATCCCCAGGATGAAACTACTTAATCATCCTAACACCTATGTTTCATACGCAGCTCCTAAGAATTTTTTTTTTCTTTTTCTTAAATCATATTGTGCCTTAATGTAGCCAAGCAATAGGAACAACAAGAAACTATATGCATAAACAAGGTAAAGAAATATTGTAGAACCAAAATATATTAACACAGAGAATAGAACTACAAGATAACTCAAACAATCCTCCACATCATTGAGCACTCTCACTCAAGTCTAAGCCAATTAAATCAATCCACATCATTTCCTACCAATGCCTTAGTACTATAATAATATTCCTAATTCATCCTAATGCTCCAATAAAAAATTTACACGTAAGCAGCTAAAATGCCTACATCAATACTTTCTGAAAATCGCATGCATATCATCTATCATATATTTTTAAGTAAATTACATTTTATAATCCTTGGATTTTCAATTTTATGCTTGTTTGATCCTTGTATATTCAAATCTTAGAATTTGCGCTATTACTTAAATAAAAAAATAATAATTAAAAAAATTCCATGAAAAATTGGCTAGACACCTTTATTCTTAATTTTAGAACATAAATCGTGCTATTAATAAAAAAAATTAGATGTTAACTATGCCCAGAAGTGTCATAAGAAATCATATTTGTCATTAATTACTTATGTTAGTAAGCAGTAAGCCATAAGAGATTCCTCATTGACACCCAAAATTAAATACTACAATTAAAGATCAAAACAATAGAACTTCCTTCTTGTCTTCTAACTCGAGCCAAAACATAATCAAATAAAATAAATGCAATCACATACACACACACAGGATAAATGATATCCAAAATAATGGTACTTACTTATATGGCAATTTGAAACATTTCTCATGCGGTATATTGTTCTCCTGATCCCTAGAATTTGCAAACTCAGCAAATTCCTTTAAGCAAGTCAAGAACAACGTCATGGCTTTATCGTAACGTGTACTCCAAAACAAATTCACTGGTCCAAACCTATTGAATTACTGATATATCAAATCAAGAGTCCGGAAGAACATTTCAAAGAATTGGAAACTAAAACATGAACAACGTGGCCTTTTTTATTTAAAAATAAATAAATAAATAAAACCATCTATTCTCATATTTGAGTGATTCACCAAATTACGCCAATGTTGACTAGAGCATTAGAATAAGTAAAATGGCTTTTGTTTTCATAAATTAATTTCTTTTCAATATACGGGCAAGAATATTCACTGAAACCCATTTAATTTCATTACAGTAATGGAATTTACAAAAATAAAACTAAAATACTCTTTACTTACAGTTTATATGTACTATTTTTCCTCCTTTTTTTTTTTTTTAAGGAAACAAGATTTTTCGTTGATAAAATGAAAAGAGACTAATGCGAAAAAATTCATAATACCAGAAAACAAAGGAGACTAATAAGATAATAGAGACAATACAAAACTTAAACGGAGAAAATAAAACTACGATTTTATTGATGAAGGTAAATTGTTTTAGCTTTAGACAATAAAAAAATACATGATACCAGAAAACCAGGAGGCAGGATTATTAGATACATGAGGTACTTTGTTTTATTGATGAAGGTAAATTGTTTGACCCTCCTTTGCTGAATGGGAAGTATACTTAGGCTAATTCCAGGTGCCCACTAAGATTGACAGATTTTTACTTTTAGAAGATTGGATTGAGAGGTTCGGTAGTTCAAGACAGTCGAGGGGACCGAGAGTCACTTTAGATCACTGGCCTATTATTTTGACCCTGGATTCTCAGAGTTGGGGTCCGATTCTTTTCCGCTTCAAGAATGTGGCTTGAGCATCTTTCGTTCCTTTAACGCCAATATTTCTTCTTGGTGGAGGGGCTCTATTCTTGGAAAGTGGAAAGGTTATCGCTTTATGGGTAAATTGAGGACTCTAAAAGAGACCTTACTTGGAACAAAGAGGTTTCTGGAGATGTTAAATTAAATAAGCAAGAAACCCTTAACAGAATCGAGGAGATTGATTCCAAGGAGCTGGAGAGCCCTTTGGATTCAGCCTTGAAGGAGGTAAGGTTAGCTCTTAAAAGGGGAGTTTGCTAAGTTGGTAAGAAAAGAGTATCAGTTGGAGTCAAAGGCGAAAGTGAAATGGGCAAAAGAAGGGGATTGTAATACTTCTTTTTTCCATAGGGTGGCTAGTGGCAGAAGGAACAATTGGCCCTCTGATCATGGGCAATGAGGAGTACACTTGTAACGATAAGGATGTGGAGGAGGAGGTTCTCTCTGTGTTTTCTAACCTTTATAACCCGATGGTGTTCCCCAAGCCGTTTGTTTAGGGTATTGATTGGTGTCTTATTTTGGATAGGGAAGGTGATGAGTTGGTGGCCCACTTACTTTGAAATAAATTTAAAAAGCAGTTTTTAGGAGTGATAGGACCAAATTGCCAGGCTCGGATGGGTTTTTGTTGGCTTTTTACCAAGACAATTGGGATCTTTAGAACTCAAGGACATAATTGCACAACCTATAGAACAAATCCTGTTAAAGTAAGGTTGTAAGACAATTGAAATCTTATTAAGGATGAGTTGGAAGGTGTTTTTAAGGAGTTTTTTGAGAGGGAAATTTCGAATAGATCTATTTCAAAAACCTATGTGTGTCTCATTCCAAGAAAGATAATGCTAATGAGGTTAAGGATTTCTGGCCTATCAACCTTATCACTAGTGTTTACGAGATTCTAGATAAGGTTACTTGCAAATCAATTAAGAAAAGTGCTTCCTTCAACCACTTTGGAGGCGCAAAGAGAGTTCATAGTTGGGAGACGGATTCTAGATCAAGCCCTTATTGCCGACGAAATCATTGAGGGTTATAAAGCCAAAAAGAAGGGAGGTCTGTTATTCAACATTGACTTTGAAAAGGCTTATGATCATGTTGTTTGGGATTTTTTGGACAAGGCGATGGAAAAGAAAGGTTGTGGGTATAAATGGAGGATGTGGATGTGGAGTTGTGTTAAAAATGTGAATTATTTGATTCTCATTAACCGTTCTCCAAAGGGATCAATTAAGGCTTGAGGTCTGAGACAAAGGGAACCTGTTATCTCCCTTCTTGTTCTTACTTGTGGTTGATGTCTTGAGTAGACTCGTCTCGAGGGGTGGAAGGCAATATTAAGGTGAGTATCGAGGGACGAGGGGTGGCTTTATGTAATCTTCATTTTGCTGACGATACGATTTTATTTTGCTCTGATCAAGCCTGTTTTGAGTGGCATCCCCATTTGTTATCTTCCTCTTTTTCATGCCCCTCTTTTTGTTTGCAAGAGTTTGGAGAAACTTATGAGGGACTTCCTTTAGGACAGTGTTGATGAAGGGAAAGAGTCTCATTTGGTTAGCTAGGAGCTTATTGGGAAACCGATTGACTAAGGGGGATTAGAGTTAGGAAATCTCAAGTTAAGCCTATTAGCTAAATGGCATCAGCACTTTTATCTTGAGCCTAAATCCTTGTGGCGTAGGATTATTGTGACTAAGTATGGCTCCCATCCCTTTGAATGGTGTCCAAAGGGTTAAAAGCACATACCAAAATCTCTGGAAAGATATATCTTTGGAGCTCCCTTCTTTCTCCCATCTTGTTCGTTGTCTGATGGGGGAAGTAAGGCAACATACTTTTGGGAAGATTGGTGGGTGGGGGATAGACCCCTTCACATGGCGTTTCGTCCTTTACATCATTTATCTTCCTTTAAAAATCGTTTGGTTTTTTATTTCTTGATTTGGTTAGGAAGCTCTGTCTTTTTCTTTTGGTTTTCATCATCCCTTGGCCAATAGGGTAACGTTGGAGGTTAGCTCTCTTCGGTCTTTGCTTGATGCTTTCAATTTTAAGCTTGGGAGAAGGGATGTTCGTGTTTGGAGTCCTAATCTTCTTGAGGGTTCTCTTTCATTTGTTGTTGGACCCCTCTCCCATCAATGAGTTGGTTTTTTATGTGTTATGGAGGATTAAGATTCCAAAGAAAGTGAAGTTCTTTATCTGACGTTTTATTGGGTCGTATGAACAGTTTGATACGCTTTCGAGAAGGATGCCCTTGTTAATGGGTCCGTTTTGTTGTATTCTTTGTTGAAAGACGAAGGAAGACCTGAATCACATTCTCTGGAGCTATCAGTTTGTGAGGTCTGTTTGGGATTGTTTCTTTGAGGCGTTTGATCTTGTGTTAGCTCGTCAGAGGGATGTCCATGCGACGATCAAGGAGTTCCTCCTCCATCTGCCTTTCAGAGAGAAGGGTCGTTTCTTGTGGTTTGTTGGGATGTGTGCTTTGTTGTGGGATCTTTGATGGGATAAGAACAACCTAGTGTTTAAAGGTGTTGAGTGGGACCCTAGTGAGGTTTAGTCCTTGGTGAGATTTCATGTTTCTCTTTGAGCTTCGATTTCGAAGACTTTTTATAATTACTCTCGAGTCAACATTGTACTTAGTTGGACTCCCTTTGTCTAGTGAGGTTTTTGTGGGCTGGTTATTAATATGTCCTATTCATTAGTTGTTTCTATAAAAATAATAATAATAATTATAAATAAATAAAATAAAATGATTTTTTTTTTTTTTTAATTTCTTTTCAATATATGGGCAACAATATTCACTGAAACCCATTCAATTTCATTACAGTAATGGAATTTACAAAAATAAAACTAAAATACTCTTTACTTACAGTTCATATGTATTGTTATTGTCCATGATGCGAGGGTAGCTCCCCATTGGAATTATTTTTATCCGATATCTATGGAGTAGCGAATTAAAGAAACGGAGTTCATCACTTAATCTGGATCCCTAGATCATTTATGCTTATTTTAGACACCAAAATATGCTATTGGTTCCCAGAATGAAAATTCAAAACAATCAACTGTACAGATTTTATCCAACAATGTTCCAAGACCAGAATGCCAGGTGGAATTCACTTTTTCTAGGTATCCTTTTGTTTGTAGTCATAACAAACAATTACCAATTTAACTAAATTATTTATAACTTATTTTTCTAATATGTTGTTCATTACAAGAAACAACTCTCTAATACGCATATCTTTGGTTCCATTTTCCAATAAATTTCCATTCCAAAATTGTTGAGTAACTTGCTTTCTCTCTATTTTTATTTTTTTTCCTCTCACCAGAACTTGGTTTCCACTATGTTAAAGGTCTGCACATCCTTTCATCTCAATCAATCCAGAATACCAATCCCAAAGTAATAATCAAAGGACAATTCTCATGAAAAAGCAACTTAACAATTGCTCCGGTGTTGAACTGAATATTTCTAAAAGTGCTTCTCAAAAATTGTTACCCAGAAAAGGATACTGAAACCTTGGCCTGAAATACTGACACATTGTATGAAGAAGAAGGCTAGCTTGTCCCCATGCAGCATTTATTTCATCCCATTCAACCTAAATGTTTCAACATAAAAGTTAGCAGGAAAAGGAGTTGGAGTCTAATGACTAAAAATTCTAAAACACAGGAACAATAGAATATGCTTAGTTTTCATACTGGAATCTTAGGAAGACGTCCAAGCCGGAAATTGTTAATCGTTCCAAAATCTCCATCATGCCAAATGGGAAATGCATCATTGAGCACATTTGTTCGCTTCAACAATTCCAAGTGTGCTTGTGA

mRNA sequence

ATGGCCTGGTGTGCGGCTCGGACCTTTCACATGCCGGCGTTTGACGTCACTGCACTGCGCTCCAAGACTCCCTTAGCCGTCGGCGTCGGTTGCGCTTCGGTGGCCGGAACCACCTTGTGGCGATCTTNTATTGGTTTCGAAACTTGGAATGCCTTAGATTCACTGTTTTTTCTTCCTTGTGTCACTAATATTAACAAACACTTCTCATTGCCATCTCTGCTTTTTATAGAAGCCCTCCATTTTATTAAAAAAACGTTGTATGGTATTATAATTCAAAGGGAGGGAGAGACAGAGAGACTAAATCCTAGACTTCCTGTACAGATTCAGTTATCTTTGCGTGATGGAATAGTTTTCGACCTTGTCGTTCTCAATCCTGCAACATTCGCCGATGACGATCAGAAATTCATATGTATTGTTATTGTCCATGATGCGAGGACACCAAAATATGCTATTGGTTCCCAGAATGAAAATTCAAAACAATCAACTGTACAGATTTTATCCAACAATGTTCCAAGACCAGAATGCCAGGTGGAATTCACTTTTTCTAGGAAGACGTCCAAGCCGGAAATTGTTAATCGTTCCAAAATCTCCATCATGCCAAATGGGAAATGCATCATTGAGCACATTTGTTCGCTTCAACAATTCCAAGTGTGCTTGTGA

Coding sequence (CDS)

ATGGCCTGGTGTGCGGCTCGGACCTTTCACATGCCGGCGTTTGACGTCACTGCACTGCGCTCCAAGACTCCCTTAGCCGTCGGCGTCGGTTGCGCTTCGGTGGCCGGAACCACCTTGTGGCGATCTTNTATTGGTTTCGAAACTTGGAATGCCTTAGATTCACTGTTTTTTCTTCCTTGTGTCACTAATATTAACAAACACTTCTCATTGCCATCTCTGCTTTTTATAGAAGCCCTCCATTTTATTAAAAAAACGTTGTATGGTATTATAATTCAAAGGGAGGGAGAGACAGAGAGACTAAATCCTAGACTTCCTGTACAGATTCAGTTATCTTTGCGTGATGGAATAGTTTTCGACCTTGTCGTTCTCAATCCTGCAACATTCGCCGATGACGATCAGAAATTCATATGTATTGTTATTGTCCATGATGCGAGGACACCAAAATATGCTATTGGTTCCCAGAATGAAAATTCAAAACAATCAACTGTACAGATTTTATCCAACAATGTTCCAAGACCAGAATGCCAGGTGGAATTCACTTTTTCTAGGAAGACGTCCAAGCCGGAAATTGTTAATCGTTCCAAAATCTCCATCATGCCAAATGGGAAATGCATCATTGAGCACATTTGTTCGCTTCAACAATTCCAAGTGTGCTTGTGA

Protein sequence

MAWCAARTFHMPAFDVTALRSKTPLAVGVGCASVAGTTLWRSXIGFETWNALDSLFFLPCVTNINKHFSLPSLLFIEALHFIKKTLYGIIIQREGETERLNPRLPVQIQLSLRDGIVFDLVVLNPATFADDDQKFICIVIVHDARTPKYAIGSQNENSKQSTVQILSNNVPRPECQVEFTFSRKTSKPEIVNRSKISIMPNGKCIIEHICSLQQFQVCL

Homology

[Close]

BLAST of Lsi09G017180 vs. TrEMBL
Match: A0A0A0L2Z6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G077580 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.3e-14
Identity = 40/42 (95.24%), Postives = 41/42 (97.62%), Query Frame = 1


Query: 1  MAWCAARTFHMPAFDVTALRSKTPLAVGVGCASVAGTTLWRS 43
          MAWCAARTFHMPAFDVTALRSK+PLAVGVGC SVAGTTLWRS
Sbjct: 1  MAWCAARTFHMPAFDVTALRSKSPLAVGVGCVSVAGTTLWRS 42

[Close]

BLAST of Lsi09G017180 vs. TrEMBL
Match: W9R0G1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_017847 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.9e-08
Identity = 32/43 (74.42%), Postives = 38/43 (88.37%), Query Frame = 1


Query: 1  MAWCAARTFHMPAFDVTALRSKTPL-AVGVGCASVAGTTLWRS 43
          MAWCAARTF+MPA ++ ALR +TPL A GVGCAS+AG+TLWRS
Sbjct: 1  MAWCAARTFNMPAAEMGALRGRTPLAAAGVGCASLAGSTLWRS 43

[Close]

BLAST of Lsi09G017180 vs. TrEMBL
Match: M5WJ62_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012000mg PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 5.5e-08
Identity = 29/42 (69.05%), Postives = 35/42 (83.33%), Query Frame = 1


Query: 1  MAWCAARTFHMPAFDVTALRSKTPLAVGVGCASVAGTTLWRS 43
          MAWCAAR+ H+P  D+ ALR++ PLAVGVG AS AG+TLWRS
Sbjct: 1  MAWCAARSLHLPTIDLGALRTRAPLAVGVGFASAAGSTLWRS 42

[Close]

BLAST of Lsi09G017180 vs. TrEMBL
Match: A0A0J8CG43_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g088360 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.6e-07
Identity = 28/42 (66.67%), Postives = 32/42 (76.19%), Query Frame = 1


Query: 1  MAWCAARTFHMPAFDVTALRSKTPLAVGVGCASVAGTTLWRS 43
          MAWCAAR+FH+PA D  ALR K  +A GVGC S AGT +WRS
Sbjct: 1  MAWCAARSFHLPAIDAGALRVKGQIAAGVGCVSFAGTNIWRS 42

[Close]

BLAST of Lsi09G017180 vs. TrEMBL
Match: D7T8C3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0090g00390 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.7e-07
Identity = 32/43 (74.42%), Postives = 36/43 (83.72%), Query Frame = 1


Query: 1  MAW-CAARTFHMPAFDVTALRSKTPLAVGVGCASVAGTTLWRS 43
          MAW  AARTF+MPA DV ALR + PLAVG+GCASVA T+LWRS
Sbjct: 1  MAWSAAARTFNMPAIDVGALRRRGPLAVGIGCASVATTSLWRS 43

[Close]

BLAST of Lsi09G017180 vs. NCBI nr
Match: gi|449470455|ref|XP_004152932.1| (PREDICTED: reactive Intermediate Deaminase A, chloroplastic [Cucumis sativus])

HSP 1 Score: 87.4 bits (215), Expect = 3.3e-14
Identity = 40/42 (95.24%), Postives = 41/42 (97.62%), Query Frame = 1


Query: 1  MAWCAARTFHMPAFDVTALRSKTPLAVGVGCASVAGTTLWRS 43
          MAWCAARTFHMPAFDVTALRSK+PLAVGVGC SVAGTTLWRS
Sbjct: 1  MAWCAARTFHMPAFDVTALRSKSPLAVGVGCVSVAGTTLWRS 42

[Close]

BLAST of Lsi09G017180 vs. NCBI nr
Match: gi|659126883|ref|XP_008463412.1| (PREDICTED: ribonuclease UK114-like [Cucumis melo])

HSP 1 Score: 85.9 bits (211), Expect = 9.7e-14
Identity = 39/42 (92.86%), Postives = 40/42 (95.24%), Query Frame = 1


Query: 1  MAWCAARTFHMPAFDVTALRSKTPLAVGVGCASVAGTTLWRS 43
          MAWCA R+FHMPAFDVTALRSKTPLAVGVGC SVAGTTLWRS
Sbjct: 1  MAWCATRSFHMPAFDVTALRSKTPLAVGVGCVSVAGTTLWRS 42

[Close]

BLAST of Lsi09G017180 vs. NCBI nr
Match: gi|470116422|ref|XP_004294381.1| (PREDICTED: reactive Intermediate Deaminase A, chloroplastic [Fragaria vesca subsp. vesca])

HSP 1 Score: 70.9 bits (172), Expect = 3.2e-09
Identity = 32/44 (72.73%), Postives = 37/44 (84.09%), Query Frame = 1


Query: 1  MAWCAARTFHMPAFDVTALRSKTPLAVGVGCASVAGTTLWRSXI 45
          MAW AAR+FHMP  D+ ALR++ PLAVGVGCASVAG+ LWRS I
Sbjct: 1  MAWTAARSFHMPTIDMAALRTRAPLAVGVGCASVAGSGLWRSSI 44

[Close]

BLAST of Lsi09G017180 vs. NCBI nr
Match: gi|657953885|ref|XP_008365068.1| (PREDICTED: ribonuclease UK114-like [Malus domestica])

HSP 1 Score: 69.3 bits (168), Expect = 9.3e-09
Identity = 31/42 (73.81%), Postives = 35/42 (83.33%), Query Frame = 1


Query: 1  MAWCAARTFHMPAFDVTALRSKTPLAVGVGCASVAGTTLWRS 43
          MAWCAARTFHMPA D+ ALR++ PLA G G ASVAG+T WRS
Sbjct: 1  MAWCAARTFHMPAVDMGALRTRAPLAAGAGFASVAGSTFWRS 42

[Close]

BLAST of Lsi09G017180 vs. NCBI nr
Match: gi|694421717|ref|XP_009338692.1| (PREDICTED: ribonuclease UK114-like [Pyrus x bretschneideri])

HSP 1 Score: 68.9 bits (167), Expect = 1.2e-08
Identity = 30/42 (71.43%), Postives = 35/42 (83.33%), Query Frame = 1


Query: 1  MAWCAARTFHMPAFDVTALRSKTPLAVGVGCASVAGTTLWRS 43
          MAWCAAR+FHMP  D+ ALR++ PLA G G ASVAG+TLWRS
Sbjct: 1  MAWCAARSFHMPVLDMAALRTRAPLAAGAGFASVAGSTLWRS 42

The following BLAST results are available for this feature:

BLAST of Lsi09G017180 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi09G017180 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L2Z6_CUCSA	2.3e-14	95.24	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G077580 PE=4 SV=1	[more]
W9R0G1_9ROSA	1.9e-08	74.42	Uncharacterized protein OS=Morus notabilis GN=L484_017847 PE=4 SV=1	[more]
M5WJ62_PRUPE	5.5e-08	69.05	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012000mg PE=4 SV=1	[more]
A0A0J8CG43_BETVU	1.6e-07	66.67	Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g088360 PE=4 S...	[more]
D7T8C3_VITVI	2.7e-07	74.42	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0090g00390 PE=4 SV=...	[more]

BLAST of Lsi09G017180 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Lsi09G017180 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449470455\|ref\|XP_004152932.1\|	3.3e-14	95.24	PREDICTED: reactive Intermediate Deaminase A, chloroplastic [Cucumis sativus]	[more]
gi\|659126883\|ref\|XP_008463412.1\|	9.7e-14	92.86	PREDICTED: ribonuclease UK114-like [Cucumis melo]	[more]
gi\|470116422\|ref\|XP_004294381.1\|	3.2e-09	72.73	PREDICTED: reactive Intermediate Deaminase A, chloroplastic [Fragaria vesca subs...	[more]
gi\|657953885\|ref\|XP_008365068.1\|	9.3e-09	73.81	PREDICTED: ribonuclease UK114-like [Malus domestica]	[more]
gi\|694421717\|ref\|XP_009338692.1\|	1.2e-08	71.43	PREDICTED: ribonuclease UK114-like [Pyrus x bretschneideri]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G017180.1	Lsi09G017180.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi09G017180	Watermelon (Charleston Gray)	lsiwcgB029
Lsi09G017180	Watermelon (97103) v1	lsiwmB038
Lsi09G017180	Cucumber (Gy14) v2	cgyblsiB366
Lsi09G017180	Melon (DHL92) v3.6.1	lsimedB019
Lsi09G017180	Silver-seed gourd	carlsiB070
Lsi09G017180	Silver-seed gourd	carlsiB883
Lsi09G017180	Cucumber (Chinese Long) v3	cuclsiB424
Lsi09G017180	Watermelon (97103) v2	lsiwmbB026
Lsi09G017180	Wax gourd	lsiwgoB011
Lsi09G017180	Cucumber (Gy14) v1	cgylsiB562
Lsi09G017180	Cucurbita maxima (Rimu)	cmalsiB338
Lsi09G017180	Cucurbita maxima (Rimu)	cmalsiB814
Lsi09G017180	Cucurbita moschata (Rifu)	cmolsiB327
Lsi09G017180	Cucurbita moschata (Rifu)	cmolsiB800
Lsi09G017180	Cucurbita pepo (Zucchini)	cpelsiB106
Lsi09G017180	Cucurbita pepo (Zucchini)	cpelsiB251
Lsi09G017180	Wild cucumber (PI 183967)	cpilsiB404
Lsi09G017180	Cucumber (Chinese Long) v2	culsiB402
Lsi09G017180	Melon (DHL92) v3.5.1	lsimeB017