Lsi09G016940 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi09G016940
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	RNA binding protein, putative
Location	chr09 : 25421664 .. 25424174 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGTTTGGAAATGGCGACCGTTAATCCTTTTGATTTGTTGGGAGATGATGACGCTGAGGACCCATCGCAGCTAATTGCGGCTAAGCAGGTGGCGGCTGTGACGGCGCCGCCGTCTAAGAAAAGCCCTGCTCAGACCAAACCGGTGGCTTCTGGGGCTCAGCCGAATAAGCCTGCTAGTCTTCCTTCCAAGCCTCTTCCACCTGCTCAGGCTGGTAAGATTCTTCGTTTTTAAGTTTCTGGTTTGATTTTTTAATATTGATGTTTTTTTATTGCTTTGGTTGATTGATTTTACATTTTTTAGATATAGTTTATTGTTTCCTTTCTAGCTGTTTGGCCTTCAGCCTAAAACTACGCAAGAGCGAAGGGTAGTAACTGTTTTTAATTCGGTCGAAGTATCTTTTTTTTTGGCGAAGTTTTGTAGGATGTAATAGTTGGCTTCGTTATATTGTGTTTGGCAGTTACATTTTGTTTCTAATTCAGATAATACCCAATGATTTGTTTGCTTAGGTACTATGATTGGAAGATTAATGAATTGAAAGTATCAATACCTTTTCTTTTGGATGAAATCTGATGTCTGCAATGCAGTTGTGAATAAATAAATTCTATTTAAATGTTTCAAGGTTTAAATAAAATTTTGTTTTCTTTCTATGATATGTTGTTTATTTTATTCACAGTGATTGTTAATAATTTGAATCTATCGATAACAGTTGAACATTACCAAGTTGAATTTATGTTTGTTTATTGATTTGGGGTCTTTTTTGGGAACTTGGGAGTGTGCAATCTATTTTTCATTATCATGTTAGTCTTGGTTTTTTATCATTTTGTCATCCTGTTAGATTATAATTTACCAGCCTACTATTGCTCTAACCATTGGATTCTTATGAGTTTCCACTGGAATGAATTATCTATTGAGTGATTGAGACAATCTTTTTCTTACTTTGAGTAGTAAGAGAATCAAGGAATGAAGGCAGCCGTGGAGGTCGTGGCAGTGGACGAGGTGGAGGATGGGGATATGGGCGAGGTCGCGAGGGTGGTGGCTTCGATCGTGACTCTGCCAATAATGAGAACACTAATGCACCTGAAGATGGAGAGGGTGGAAAGACAACTGAAAGACGTGGATATGGTGCGCCTCGTGGTCGTGGTGGTCGTCGGGGTGGTTTCAATAATGGAGAGGCTGCTGATGGGGAACGCCCTCGTAGAACATTTGAACGCCACAGTGGAACTGGCCGTGGGTAAGTGTCTGTTCTTTTAAAATTCATTGTATACACTCCTGCTACACTGTTTTGACACTTTATTCCTGATTCTATGCCTAGAAATGAATTTAAACGTGAAGGCTCTGGTCGTGGAAATTGGGGAAGGTCAACTGACGAATTTGCTGAGTAAGTACATGCGTATACCTTCCATCTTCATGTATATCTTTTTCTTGGTATTATGTGCATACATGAGCCTTCTTCTCAATCCCTGTCTCATAGAAGCCACCAGGTTGTCTCTAAAGACAAAATTCTATGGTCAGGAATGCCTTTCCCATTATGTGAAAGAAGCACTCAACCACCCAACATATACCAGGAGCTTGGCTAGCCTCATTTTTCTTTTGAGGGAGGGGGGTTGCATTTTTATGCTTGTGTTATTATCTCTTGTAGCCTAAAAATTTCTGTATTATATTTAGGGTAGCAGAGGAAGCTGTTAATGAAACTGAAAAGAATGTGGGTGACGAGAAGCCTATTCAAGAGGATGATACATCAGGTGTCAACACAGAGAACCCTGCTAAAGAACCGGAGGAAACAGAACCAGAAGACAAGGTTAGTGTCTTCGGTTTTTAGTAAATTTCTCTTAAATCTGGGGCTTATTATCCGCTTGTCCTTGATTTTCTTGTGGTTGAAAAACTTGTATTTTTGCTTGCATGTCAAGTTGAACAGGCTTTATTACTTTACTTTTAGTAGCATAAATTTGATACATGTATCAGTTGTAAATTTGATGGCATATATTAAGTCTGGTGGGCTTGGGTTGCGAACTCCATTGTACTGTCTGACTTGATTTTGAATCTAATTTACTCTTCTTCTTTTTTCTGATGCAGGAAATGACTCTGGAGGAGTATGAAAAGTTGCTTGAGGATAAAAGGAAGGCCCTTCTAGCTCTAAAAACTGAGGAGAGGAAGGTGGATCCTAAAGAATTTGCATCCATGCAACAACTTTCAAGCAAGAAGGACAACAACGACATCTTTATTAAATTGGTATACCTTCTTAATCCTCTTCGTAGTTGATTATCTATGGCCTATGGGATCTGATGACCCTTGGCCTCTTGGTACATTAAATGAGGACTTGGCAGTTTCATCTCAGTTGTTACTCCATTTGTAGGGATCTGAGAAGGATAAGCGAAAAGAACTTGCAGATAAGGAGGAGAGAACTAAGAAGGTATTATTACCTCATCTTCTTTTAGATTTCTGCCCATTAAATTGTTTACTCGGTTTTGACGCCTGGAAGTCTTGGGCAGACTCCAGCTTTTGTTTTCCA

mRNA sequence

ATTGTTTGGAAATGGCGACCGTTAATCCTTTTGATTTGTTGGGAGATGATGACGCTGAGGACCCATCGCAGCTAATTGCGGCTAAGCAGGTGGCGGCTGTGACGGCGCCGCCGTCTAAGAAAAGCCCTGCTCAGACCAAACCGGTGGCTTCTGGGGCTCAGCCGAATAAGCCTGCTAGTCTTCCTTCCAAGCCTCTTCCACCTGCTCAGGCTGTAAGAGAATCAAGGAATGAAGGCAGCCGTGGAGGTCGTGGCAGTGGACGAGGTGGAGGATGGGGATATGGGCGAGGTCGCGAGGGTGGTGGCTTCGATCGTGACTCTGCCAATAATGAGAACACTAATGCACCTGAAGATGGAGAGGGTGGAAAGACAACTGAAAGACGTGGATATGGTGCGCCTCGTGGTCGTGGTGGTCGTCGGGGTGGTTTCAATAATGGAGAGGCTGCTGATGGGGAACGCCCTCGTAGAACATTTGAACGCCACAGTGGAACTGGCCGTGGAAATGAATTTAAACGTGAAGGCTCTGGTCGTGGAAATTGGGGAAGGTCAACTGACGAATTTGCTGAGGTAGCAGAGGAAGCTGTTAATGAAACTGAAAAGAATGTGGGTGACGAGAAGCCTATTCAAGAGGATGATACATCAGGTGTCAACACAGAGAACCCTGCTAAAGAACCGGAGGAAACAGAACCAGAAGACAAGGAAATGACTCTGGAGGAGTATGAAAAGTTGCTTGAGGATAAAAGGAAGGCCCTTCTAGCTCTAAAAACTGAGGAGAGGAAGGTGGATCCTAAAGAATTTGCATCCATGCAACAACTTTCAAGCAAGAAGGACAACAACGACATCTTTATTAAATTGGGATCTGAGAAGGATAAGCGAAAAGAACTTGCAGATAAGGAGGAGAGAACTAAGAAGGTATTATTACCTCATCTTCTTTTAGATTTCTGCCCATTAAATTGTTTACTCGGTTTTGACGCCTGGAAGTCTTGGGCAGACTCCAGCTTTTGTTTTCCA

Coding sequence (CDS)

ATGGCGACCGTTAATCCTTTTGATTTGTTGGGAGATGATGACGCTGAGGACCCATCGCAGCTAATTGCGGCTAAGCAGGTGGCGGCTGTGACGGCGCCGCCGTCTAAGAAAAGCCCTGCTCAGACCAAACCGGTGGCTTCTGGGGCTCAGCCGAATAAGCCTGCTAGTCTTCCTTCCAAGCCTCTTCCACCTGCTCAGGCTGTAAGAGAATCAAGGAATGAAGGCAGCCGTGGAGGTCGTGGCAGTGGACGAGGTGGAGGATGGGGATATGGGCGAGGTCGCGAGGGTGGTGGCTTCGATCGTGACTCTGCCAATAATGAGAACACTAATGCACCTGAAGATGGAGAGGGTGGAAAGACAACTGAAAGACGTGGATATGGTGCGCCTCGTGGTCGTGGTGGTCGTCGGGGTGGTTTCAATAATGGAGAGGCTGCTGATGGGGAACGCCCTCGTAGAACATTTGAACGCCACAGTGGAACTGGCCGTGGAAATGAATTTAAACGTGAAGGCTCTGGTCGTGGAAATTGGGGAAGGTCAACTGACGAATTTGCTGAGGTAGCAGAGGAAGCTGTTAATGAAACTGAAAAGAATGTGGGTGACGAGAAGCCTATTCAAGAGGATGATACATCAGGTGTCAACACAGAGAACCCTGCTAAAGAACCGGAGGAAACAGAACCAGAAGACAAGGAAATGACTCTGGAGGAGTATGAAAAGTTGCTTGAGGATAAAAGGAAGGCCCTTCTAGCTCTAAAAACTGAGGAGAGGAAGGTGGATCCTAAAGAATTTGCATCCATGCAACAACTTTCAAGCAAGAAGGACAACAACGACATCTTTATTAAATTGGGATCTGAGAAGGATAAGCGAAAAGAACTTGCAGATAAGGAGGAGAGAACTAAGAAGGTATTATTACCTCATCTTCTTTTAGATTTCTGCCCATTAAATTGTTTACTCGGTTTTGACGCCTGGAAGTCTTGGGCAGACTCCAGCTTTTGTTTTCCA

Protein sequence

MATVNPFDLLGDDDAEDPSQLIAAKQVAAVTAPPSKKSPAQTKPVASGAQPNKPASLPSKPLPPAQAVRESRNEGSRGGRGSGRGGGWGYGRGREGGGFDRDSANNENTNAPEDGEGGKTTERRGYGAPRGRGGRRGGFNNGEAADGERPRRTFERHSGTGRGNEFKREGSGRGNWGRSTDEFAEVAEEAVNETEKNVGDEKPIQEDDTSGVNTENPAKEPEETEPEDKEMTLEEYEKLLEDKRKALLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKLGSEKDKRKELADKEERTKKVLLPHLLLDFCPLNCLLGFDAWKSWADSSFCFP

Homology

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BLAST of Lsi09G016940 vs. TrEMBL
Match: A0A0A0K9Z4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G106180 PE=4 SV=1)

HSP 1 Score: 494.2 bits (1271), Expect = 1.2e-136
Identity = 275/304 (90.46%), Postives = 285/304 (93.75%), Query Frame = 1


Query: 1   MATVNPFDLLGDDDAEDPSQLIAAKQVAAVTAPPSKKSPAQTKPVASGAQPNKPASLPSK 60
           M T+NPFDLLGDDDAEDPSQLIAAK  A  TAP SKK+PAQTKP+ SGAQ NKPASLPSK
Sbjct: 1   MTTLNPFDLLGDDDAEDPSQLIAAKVAAVATAPLSKKAPAQTKPLPSGAQLNKPASLPSK 60

Query: 61  PLPPAQAVRESRNEGSRGGRGSGRGGG--WGYGRGREGGGFDRDSANNENTNAPEDGEGG 120
           PLPPAQAVRESRNEGSRGGRGSGRGGG  +GYGRGREGGGF+RDS NNEN NAPEDG GG
Sbjct: 61  PLPPAQAVRESRNEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDSTNNENINAPEDGVGG 120

Query: 121 KTTERRGYGAPRGRGGRRGGFNNGEAADGERPRRTFERHSGTGRGNEFKREGSGRGNWGR 180
           KT+ERRGYG PRGRGGRRGGFN+GE A+GERPRR FERHSGTGRGNEFKREGSGRGNWGR
Sbjct: 121 KTSERRGYGGPRGRGGRRGGFNDGEGAEGERPRRAFERHSGTGRGNEFKREGSGRGNWGR 180

Query: 181 STDEFAEVAEEAVNETEKNVGDEKPIQEDDTSGVNTENPAKEPEETEPEDKEMTLEEYEK 240
           STDEFAEVA E VNETEKNVGDEKPIQEDDTSGVNTENPAKEP+ETEPEDKEMTLEEYEK
Sbjct: 181 STDEFAEVAGETVNETEKNVGDEKPIQEDDTSGVNTENPAKEPQETEPEDKEMTLEEYEK 240

Query: 241 LLEDKRKALLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKLGSEKDKRKELADKEERT 300
           LLEDKRKALLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKLGSEKDKRKE+ADKEERT
Sbjct: 241 LLEDKRKALLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKLGSEKDKRKEMADKEERT 300

Query: 301 KKVL 303
           KK L
Sbjct: 301 KKSL 304

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BLAST of Lsi09G016940 vs. TrEMBL
Match: A0A0A0KCI2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G105680 PE=4 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 7.4e-105
Identity = 233/305 (76.39%), Postives = 260/305 (85.25%), Query Frame = 1


Query: 1   MATVNPFDLLGDDDAEDPSQLIAAKQVAAVTAPPSKKS--PAQTKPVASGAQPNKPASLP 60
           MAT NPFDLLGDDDAEDPSQL+A KQ AA    P K S  P   +  A+ A+ +KPA+LP
Sbjct: 1   MATTNPFDLLGDDDAEDPSQLMAVKQAAAA---PKKGSDHPQAKQQAAAAAKLSKPANLP 60

Query: 61  SKPLPPAQAVRESRNEGSRGGRGSGRGGGWGYGRGREGGGFDRDSANNENT--NAPEDGE 120
           SKPLPPAQAVRE++NEG RGGR SGRGG  GYGRGR  GGF+R+S NNE +  + PEDGE
Sbjct: 61  SKPLPPAQAVREAKNEGGRGGRSSGRGGR-GYGRGRGSGGFNRESPNNEYSFSSNPEDGE 120

Query: 121 GGKTTERRG-YGAPRGRGGRRGGFNNGEAADGERPRRTFERHSGTGRGNEFKREGSGRGN 180
            G+TTE+RG YG PRGRGGRRGGF NG+ ADGERPR  FERHSGTGRGNEFKREGSGRGN
Sbjct: 121 TGRTTEKRGGYGGPRGRGGRRGGFYNGDTADGERPRGAFERHSGTGRGNEFKREGSGRGN 180

Query: 181 WGRSTDEFAEVAEEAVNETEKNVGDEKPIQEDDTSGVNTENPAKEPEETEPEDKEMTLEE 240
           WGRS +EF EVAEEA NE++K +GDEKP+ EDDT+GVNTENPAKE EE EPEDKEMTLEE
Sbjct: 181 WGRSAEEFPEVAEEA-NESQK-LGDEKPVHEDDTAGVNTENPAKESEEKEPEDKEMTLEE 240

Query: 241 YEKLLEDKRKALLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKLGSEKDKRKELADKE 300
           YEKLL++KRK+LLALKTEERKVDPKEFAS+QQLSSKK+N DIFIKLGS+KDKRKE ADKE
Sbjct: 241 YEKLLDEKRKSLLALKTEERKVDPKEFASLQQLSSKKENQDIFIKLGSDKDKRKETADKE 299

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BLAST of Lsi09G016940 vs. TrEMBL
Match: M5X0A0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007410mg PE=4 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 1.1e-92
Identity = 216/313 (69.01%), Postives = 246/313 (78.59%), Query Frame = 1


Query: 1   MATVNPFDLLGDDDAEDPSQLIAAKQVAAVTAPPSKKSPAQTKPVASGAQPNKPASLPSK 60
           MAT+NPFDLLGDDDAEDPSQL+AA+Q   + A P K  PAQ K  A G Q  KPA LPSK
Sbjct: 1   MATMNPFDLLGDDDAEDPSQLLAAQQ-QKLAAAPKKALPAQNKSGAQG-QETKPAKLPSK 60

Query: 61  PLPPAQAVRESRNEGSRGGRGSGRGGGWGYGRGREGGGFDRDSANNENT----NAP---- 120
           P PPAQAVRE+RNE   GGRG GRG G+GY RGR GGG++R+S NNENT     AP    
Sbjct: 61  PAPPAQAVREARNEAG-GGRGGGRGRGYGYSRGRGGGGYNRESPNNENTFTNSGAPAGQG 120

Query: 121 --EDGEGGKTTERRGYGAPRG--RGGRRGGFNNGEAADGERPRRTFERHSGTGRGNEFKR 180
             EDG+G ++ ERRGYG PRG  RGGRRGGF NGE +DGERPRR FER SGTGRG+E KR
Sbjct: 121 AFEDGDGNQS-ERRGYGGPRGPYRGGRRGGFGNGEVSDGERPRRVFERRSGTGRGSEIKR 180

Query: 181 EGSGRGNWGRSTDEFAEVAEEAVNETEKNVGDEKPIQEDDTSGVNTENPAKEPEETEPED 240
           EGSGRGNWG  TDE ++V EE  N TE+N+GDEKP+ E D +  N E PA EPEE EPED
Sbjct: 181 EGSGRGNWGSETDELSQVIEEVANVTERNLGDEKPVGEVDAADGNKETPANEPEEKEPED 240

Query: 241 KEMTLEEYEKLLEDKRKALLALKT-EERKVDPKEFASMQQLSSKKDNNDIFIKLGSEKDK 300
           KEMTLEEYEK+LE+KRKAL ALKT EERKVD KEFAS+QQLS+KK N+DIFIKLGS+KDK
Sbjct: 241 KEMTLEEYEKVLEEKRKALQALKTSEERKVDTKEFASLQQLSNKKGNDDIFIKLGSDKDK 300

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BLAST of Lsi09G016940 vs. TrEMBL
Match: D7SLZ5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0021g01420 PE=4 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 2.3e-90
Identity = 213/314 (67.83%), Postives = 241/314 (76.75%), Query Frame = 1


Query: 1   MATVNPFDLLGDDDAEDPSQLIAAKQVAAVTAPPSKKSPAQTKPVASGAQPNKPASLPSK 60
           MAT+NPFDLLGDDD+EDPSQLIAA+++        KK+ A T+  A+ AQ  KPA LPSK
Sbjct: 1   MATMNPFDLLGDDDSEDPSQLIAAQKIVP------KKALAPTQ-AAAPAQQAKPAKLPSK 60

Query: 61  PLPPAQAVRESRNEGSRGGRGSGRGGGWGYGRGREGGGFDRDSANNENT----------N 120
           P+PPAQAVRE +NE  RGG   GRGG  GYGRGR GGGF+RD ANNEN+           
Sbjct: 61  PVPPAQAVREGKNESGRGG---GRGGR-GYGRGRGGGGFNRDYANNENSFSNMGVAGGQG 120

Query: 121 APEDGEGGKTTERRGYGAPRGR-GGRRGGFNNGEAADGERPRRTFERHSGTGRGNEFKRE 180
           APEDGEGGK +ERR YG PR    GRRGGF+NGEA DG+RPRR FER SGTGRGNE KRE
Sbjct: 121 APEDGEGGKPSERRNYGGPRPPFRGRRGGFSNGEAGDGDRPRRAFERRSGTGRGNELKRE 180

Query: 181 GSGRGNWGRSTDEFAEVAEEAVNETEKNVGDEKPIQEDDTSGVNTENPAKEPEETEPEDK 240
           GSGRGNWG  TDE + V EE VNE EKN+G EKP+ E+D +  N ENP  EPEE EPE+K
Sbjct: 181 GSGRGNWGTETDELSGVTEEVVNEGEKNLGAEKPVGEEDVADGNKENPVNEPEEKEPEEK 240

Query: 241 EMTLEEYEKLLEDKRKALLALKTEERKVD-PKEFASMQQLSSKKDNNDIFIKLGSEKDKR 300
           EMTLEEYEK+LE++RKAL  LKTEERKVD  KEF SMQQLSSKK N+DIFIKLGS+KDKR
Sbjct: 241 EMTLEEYEKVLEERRKALQTLKTEERKVDVDKEFKSMQQLSSKKGNDDIFIKLGSDKDKR 300

Query: 301 KELADKEERTKKVL 303
           KE A+KEER KK +
Sbjct: 301 KEAAEKEERAKKAV 303

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BLAST of Lsi09G016940 vs. TrEMBL
Match: A0A151RAW5_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_038893 PE=4 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 2.3e-90
Identity = 210/324 (64.81%), Postives = 249/324 (76.85%), Query Frame = 1


Query: 1   MATVNPFDLLGDDDAEDPSQLIAAKQVAAVTAPPSKKSPAQTKPVASG---AQPNKPASL 60
           MAT NPFDLLGDD AEDPSQLIAA+Q+ A  APP K+   Q KP A G   AQP+KPA L
Sbjct: 1   MATANPFDLLGDD-AEDPSQLIAAEQLKAAAAPPKKE---QAKPGARGGAVAQPSKPAQL 60

Query: 61  PSKPLPPAQAVRESRNEGSRGGRGSGRGGGWGYGRGREGGGFDRDSANNENTNAP----- 120
           PSKPLPP QAVRE++++ SRGGRG GRGGG G+GRGR  GGF RD +N+EN++AP     
Sbjct: 61  PSKPLPPTQAVREAKSDVSRGGRGGGRGGGRGFGRGRGSGGFGRDYSNDENSSAPANQGA 120

Query: 121 -EDGEGGKTTERRGYGAPRGR------GGRRGGFNNGEAADGERPRRTFERHSGTGRGNE 180
            E  + G  +ERRGYG P G       GGRRGGF+NG+  +  RPRR FERHSGTGRGNE
Sbjct: 121 FEGDDSGNPSERRGYGGPGGPRGPYRGGGRRGGFSNGQVGEDGRPRRAFERHSGTGRGNE 180

Query: 181 FKREGSGRGNWGRSTDEFAEVAEEAVNETEKNVGDEKPIQEDDTSGVNTENPAKEPEETE 240
           FKR+G+GRGNWG  +D+ AEV EE VNE+EKN+GDEKP  E+D +  N ++PA E EE E
Sbjct: 181 FKRDGAGRGNWGTQSDDIAEVTEEVVNESEKNLGDEKPAGEEDGAEGNKDSPANENEEKE 240

Query: 241 PEDKEMTLEEYEKLLEDKRKALLALKTE-ERKVDPKEFASMQQLSSKKDNNDIFIKLGSE 300
           PEDKEMTLEEYEK+LE++RKAL ALKTE  RKVD KEFASMQ LS+KKDN++IFIKLGS+
Sbjct: 241 PEDKEMTLEEYEKVLEERRKALQALKTEATRKVDIKEFASMQPLSNKKDNDEIFIKLGSD 300

Query: 301 KDKRKELADKEERTKKVLLPHLLL 309
           KDKRK+  DKEE++KK +  H  L
Sbjct: 301 KDKRKDALDKEEKSKKSVNIHEFL 320

[Close]

BLAST of Lsi09G016940 vs. TAIR10
Match: AT4G16830.1 (AT4G16830.1 Hyaluronan / mRNA binding family)

HSP 1 Score: 229.2 bits (583), Expect = 3.8e-60
Identity = 177/318 (55.66%), Postives = 212/318 (66.67%), Query Frame = 1


Query: 1   MATVNPFDLLGDDDAEDPSQLIAAKQVAAVTAPPSKKSPAQTKPVASGAQPNKPASLPSK 60
           MAT+NPFDLL DDDAEDPSQL     VA      SKKS  Q   + + + P     LPSK
Sbjct: 1   MATLNPFDLL-DDDAEDPSQLA----VAIEKIDKSKKS-GQVSSLPAKSAPK----LPSK 60

Query: 61  PLPPAQAVRESRNEGSRGGRGSGRGGGWGYGRGREGGGFDRDSANNEN----TNAPEDGE 120
           PLPPAQAVRE+R++  RGG G G     G+ RGR  GG++RD  NN      T    +G+
Sbjct: 61  PLPPAQAVREARSDAPRGGGGRG-----GFNRGR--GGYNRDDGNNGYSGGYTKPSGEGD 120

Query: 121 GGKTT-ERRGYG-APRGR---------GGRRGGFNNGEAADGERPRRTFERHSGTGRGNE 180
             K++ ERRG G APRG          GGRRGGF+N E  DGERPRR FER SGTGRG++
Sbjct: 121 VSKSSYERRGGGGAPRGSFRGEGGGPGGGRRGGFSN-EGGDGERPRRAFERRSGTGRGSD 180

Query: 181 FKREGSGRGNWGRSTDEFAEVAEEAVN-ETEKNVGDEKPIQEDDTSGVNTENPAKEPEET 240
           FKR+GSGRGNWG   +E A   E     ETEK+VG EKP  +D  +  N E+   E  E 
Sbjct: 181 FKRDGSGRGNWGTPGEEIAAETEAVAGVETEKDVG-EKPAVDDVAADANKEDTVVE--EK 240

Query: 241 EPEDKEMTLEEYEKLLEDKRKALLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKLGSE 300
           EPEDKEMTL+EYEK+LE+K+KAL +L T ERKVD K F SMQQLS+KK N++IFIKLGS+
Sbjct: 241 EPEDKEMTLDEYEKILEEKKKALQSLTTSERKVDTKVFESMQQLSNKKSNDEIFIKLGSD 295

Query: 301 KDKRKELADKEERTKKVL 303
           KDKRK+  DKEE+ KK +
Sbjct: 301 KDKRKD--DKEEKAKKAV 295

[Close]

BLAST of Lsi09G016940 vs. TAIR10
Match: AT4G17520.1 (AT4G17520.1 Hyaluronan / mRNA binding family)

HSP 1 Score: 214.9 bits (546), Expect = 7.4e-56
Identity = 159/310 (51.29%), Postives = 202/310 (65.16%), Query Frame = 1


Query: 1   MATVNPFDLLGDDDAEDPSQLIAAKQVAAVTAPPSKKSPAQTKPVASGAQPNKPASLPSK 60
           MA+VNPFDLL DDDAEDPSQ++A+K +  V       +P QT          K   +P+K
Sbjct: 1   MASVNPFDLL-DDDAEDPSQIVASKPLKVV-------APVQTA---------KSGKMPTK 60

Query: 61  PLPPAQAVRESRNEGSRGGRGSGRGGGWGYGRGREGGGFDRDSANNENTNAPEDGEGGKT 120
           P PP+QAVRE+RN    GGRG+GRGG   YGRG  GG  +RDS NN+         GG  
Sbjct: 61  PPPPSQAVREARNAPG-GGRGAGRGGS--YGRGGRGGN-NRDSRNNDGPANENGYGGGYR 120

Query: 121 TERRGYGAPRG------RGGRRGGFNNG-EAADGERPRRTFERHSGTGRGNEFKREGSGR 180
               G GA RG      RG RRG ++NG ++ D ERPR+ ++RHS T  GNE KR+G+GR
Sbjct: 121 RSEEGDGARRGGPVGGYRGDRRGSYSNGGDSGDSERPRKNYDRHSRTAYGNEDKRDGAGR 180

Query: 181 GNWGRSTDEFAEVAEEAVNETEKNVGDEKPIQEDDTSGVNTENPAKEPEETEPEDKEMTL 240
            NWG + D+   V EE+    +KN+  EK   E + +    E PA++ EE +PEDKEMTL
Sbjct: 181 ANWGTTQDDITPVTEESTAVVDKNLTVEKQDGEGEATDAKNETPAEKAEE-KPEDKEMTL 240

Query: 241 EEYEKLLEDKRKALLALKTEERKVDPKEFASMQQLSSKKDNND-IFIKLGSEKDKRKELA 300
           EEYEK+LE+K+KAL A K EERKVD K F +MQQLSSKK NND +FIKLG+EKDKR  + 
Sbjct: 241 EEYEKVLEEKKKALQATKVEERKVDTKAFEAMQQLSSKKSNNDEVFIKLGTEKDKR--IT 286

Query: 301 DKEERTKKVL 303
           ++EE+T+K L
Sbjct: 301 EREEKTRKSL 286

[Close]

BLAST of Lsi09G016940 vs. TAIR10
Match: AT5G47210.1 (AT5G47210.1 Hyaluronan / mRNA binding family)

HSP 1 Score: 193.4 bits (490), Expect = 2.3e-49
Identity = 152/318 (47.80%), Postives = 194/318 (61.01%), Query Frame = 1


Query: 1   MATVNPFDLLGDDDAEDPSQLIAAKQVAAVTAPPSKKSPAQTKPVASGAQPNKPASLPSK 60
           MA++NPFDLLGDD AEDPSQL  A                + +  A+  QP K A  P+K
Sbjct: 1   MASLNPFDLLGDD-AEDPSQLAVALS-------------QKVEKAAAAVQPPKAAKFPTK 60

Query: 61  PLPPAQAVRESRNEGSRGGRGSGRGGGWGYGRGREGGGFDRDSANNE---NTNA------ 120
           P PP+QAVRESRN   +GGRG G GG  G+ RGR  GG++RD+ NN+   N N       
Sbjct: 61  PAPPSQAVRESRN-APQGGRG-GTGGRGGFSRGRGNGGYNRDNRNNDAPGNENGFSGGYR 120

Query: 121 --PEDGEGG-KTTERRGYGAPRGRGG-RRGGFNNGEAADGERPRRTFERHSGTGRGNEFK 180
              ED +G  +     GY    GR G RRGG  NGE+ D ERP R ++RHS TG G   K
Sbjct: 121 RPSEDADGASRGGSVGGYRVGGGREGPRRGGVANGESGDVERPPRNYDRHSRTGHGTGMK 180

Query: 181 REGSGRGNWGRSTDEFAEVAEEAVNETEKNVGDEKPIQEDDTSGVNTENPAKEPEETEPE 240
           R G GRGNWG + D+    +EE   E EK+   EK   ED+T     E  A+E  + E E
Sbjct: 181 RNGGGRGNWGTTEDDIPPTSEEPTTEVEKSPVAEKQGGEDETPEAKKELTAEEKAQKEAE 240

Query: 241 D---KEMTLEEYEKLLEDKRKALLALKTEERKVDPKEFASMQQLSSKKD-NNDIFIKLGS 300
           +   +EMTLEEYEK+LE+K+KAL A K EERKVD K F SMQQLS+KK+ + +IFIKLGS
Sbjct: 241 EAEAREMTLEEYEKILEEKKKALQATKVEERKVDTKVFESMQQLSNKKNTDEEIFIKLGS 300

Query: 301 EKDKRKELADKEERTKKV 302
           +K+KRK+  +K +++  +
Sbjct: 301 DKEKRKDATEKAKKSLSI 302

[Close]

BLAST of Lsi09G016940 vs. NCBI nr
Match: gi|449445497|ref|XP_004140509.1| (PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein-like [Cucumis sativus])

HSP 1 Score: 494.2 bits (1271), Expect = 1.8e-136
Identity = 275/304 (90.46%), Postives = 285/304 (93.75%), Query Frame = 1


Query: 1   MATVNPFDLLGDDDAEDPSQLIAAKQVAAVTAPPSKKSPAQTKPVASGAQPNKPASLPSK 60
           M T+NPFDLLGDDDAEDPSQLIAAK  A  TAP SKK+PAQTKP+ SGAQ NKPASLPSK
Sbjct: 1   MTTLNPFDLLGDDDAEDPSQLIAAKVAAVATAPLSKKAPAQTKPLPSGAQLNKPASLPSK 60

Query: 61  PLPPAQAVRESRNEGSRGGRGSGRGGG--WGYGRGREGGGFDRDSANNENTNAPEDGEGG 120
           PLPPAQAVRESRNEGSRGGRGSGRGGG  +GYGRGREGGGF+RDS NNEN NAPEDG GG
Sbjct: 61  PLPPAQAVRESRNEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDSTNNENINAPEDGVGG 120

Query: 121 KTTERRGYGAPRGRGGRRGGFNNGEAADGERPRRTFERHSGTGRGNEFKREGSGRGNWGR 180
           KT+ERRGYG PRGRGGRRGGFN+GE A+GERPRR FERHSGTGRGNEFKREGSGRGNWGR
Sbjct: 121 KTSERRGYGGPRGRGGRRGGFNDGEGAEGERPRRAFERHSGTGRGNEFKREGSGRGNWGR 180

Query: 181 STDEFAEVAEEAVNETEKNVGDEKPIQEDDTSGVNTENPAKEPEETEPEDKEMTLEEYEK 240
           STDEFAEVA E VNETEKNVGDEKPIQEDDTSGVNTENPAKEP+ETEPEDKEMTLEEYEK
Sbjct: 181 STDEFAEVAGETVNETEKNVGDEKPIQEDDTSGVNTENPAKEPQETEPEDKEMTLEEYEK 240

Query: 241 LLEDKRKALLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKLGSEKDKRKELADKEERT 300
           LLEDKRKALLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKLGSEKDKRKE+ADKEERT
Sbjct: 241 LLEDKRKALLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKLGSEKDKRKEMADKEERT 300

Query: 301 KKVL 303
           KK L
Sbjct: 301 KKSL 304

[Close]

BLAST of Lsi09G016940 vs. NCBI nr
Match: gi|659119706|ref|XP_008459799.1| (PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein-like [Cucumis melo])

HSP 1 Score: 492.7 bits (1267), Expect = 5.2e-136
Identity = 274/304 (90.13%), Postives = 286/304 (94.08%), Query Frame = 1


Query: 1   MATVNPFDLLGDDDAEDPSQLIAAKQVAAVTAPPSKKSPAQTKPVASGAQPNKPASLPSK 60
           MAT+NPFDLLGDDDAEDPSQLIAAK  A  TAP SKK PAQTKP+ SGAQ NKPASLPSK
Sbjct: 1   MATLNPFDLLGDDDAEDPSQLIAAKVAAVATAPLSKKGPAQTKPLPSGAQQNKPASLPSK 60

Query: 61  PLPPAQAVRESRNEGSRGGRGSGRGGG--WGYGRGREGGGFDRDSANNENTNAPEDGEGG 120
           PLPPAQAVRESRNEGSRGGRGSGRGGG  +GYGRGREGGGF+RDSAN+EN NAPEDG GG
Sbjct: 61  PLPPAQAVRESRNEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDSANSENINAPEDGVGG 120

Query: 121 KTTERRGYGAPRGRGGRRGGFNNGEAADGERPRRTFERHSGTGRGNEFKREGSGRGNWGR 180
           KTTERRGYG PRGRGGRRGGFN+GE A+GERPRR FERHSGTGRGNEFKREGSGRGNWGR
Sbjct: 121 KTTERRGYGGPRGRGGRRGGFNDGENAEGERPRRAFERHSGTGRGNEFKREGSGRGNWGR 180

Query: 181 STDEFAEVAEEAVNETEKNVGDEKPIQEDDTSGVNTENPAKEPEETEPEDKEMTLEEYEK 240
           STDEFAEVAEE VNETEKNVGDEKPIQE+DTSG NT++PAKEPEETEPEDKEMTLEEYEK
Sbjct: 181 STDEFAEVAEETVNETEKNVGDEKPIQENDTSGANTDDPAKEPEETEPEDKEMTLEEYEK 240

Query: 241 LLEDKRKALLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKLGSEKDKRKELADKEERT 300
           LLEDKRK+LLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKLGSEKDKRKE+ADKEERT
Sbjct: 241 LLEDKRKSLLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKLGSEKDKRKEIADKEERT 300

Query: 301 KKVL 303
           KK L
Sbjct: 301 KKSL 304

[Close]

BLAST of Lsi09G016940 vs. NCBI nr
Match: gi|659119708|ref|XP_008459800.1| (PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein-like [Cucumis melo])

HSP 1 Score: 397.1 bits (1019), Expect = 3.0e-107
Identity = 235/305 (77.05%), Postives = 261/305 (85.57%), Query Frame = 1


Query: 1   MATVNPFDLLGDDDAEDPSQLIAAKQVAAVTAPPSKKSPAQTKP-VASGAQPNKPASLPS 60
           MAT NPFDLLGDDDAEDPSQL+A KQ AA  AP       Q K   A+ A+ NKPA+LPS
Sbjct: 1   MATTNPFDLLGDDDAEDPSQLMAVKQAAAAVAPKKGSDHPQAKQQAAAAAKLNKPANLPS 60

Query: 61  KPLPPAQAVRESRNEGSRGGRGSGRGGGW-GYGRGREGGGFDRDSANNENT--NAPEDGE 120
           KPLPPAQAVRE++NEG RGGRGSGRGGG  GYGRGR  GGF+R++ANNE +  + PEDGE
Sbjct: 61  KPLPPAQAVREAKNEGGRGGRGSGRGGGGRGYGRGRGSGGFNREAANNEYSFSSNPEDGE 120

Query: 121 GGKTTERRG-YGAPRGRGGRRGGFNNGEAADGERPRRTFERHSGTGRGNEFKREGSGRGN 180
            G+TTE+RG YG PRGRGGRRGGF NG+  DGERPR  FERHSGTGRGNEFKREGSGRGN
Sbjct: 121 TGRTTEKRGGYGGPRGRGGRRGGFYNGDTDDGERPRGVFERHSGTGRGNEFKREGSGRGN 180

Query: 181 WGRSTDEFAEVAEEAVNETEKNVGDEKPIQEDDTSGVNTENPAKEPEETEPEDKEMTLEE 240
           WGRSTDEF EVAEEA NE++K +GDEKP+ ED T+GVNTEN AKE EE EPEDKEMTLEE
Sbjct: 181 WGRSTDEFPEVAEEA-NESQK-LGDEKPVHEDGTAGVNTENTAKESEEKEPEDKEMTLEE 240

Query: 241 YEKLLEDKRKALLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKLGSEKDKRKELADKE 300
           YEKLLE+KRK+LLALKTEERKVDPKEFAS+QQLSSKK+N D+FIKLGS+KDKRKE+ADKE
Sbjct: 241 YEKLLEEKRKSLLALKTEERKVDPKEFASLQQLSSKKENQDVFIKLGSDKDKRKEIADKE 300

[Close]

BLAST of Lsi09G016940 vs. NCBI nr
Match: gi|449466564|ref|XP_004150996.1| (PREDICTED: cyclin-dependent kinase 13-like [Cucumis sativus])

HSP 1 Score: 388.7 bits (997), Expect = 1.1e-104
Identity = 233/305 (76.39%), Postives = 260/305 (85.25%), Query Frame = 1


Query: 1   MATVNPFDLLGDDDAEDPSQLIAAKQVAAVTAPPSKKS--PAQTKPVASGAQPNKPASLP 60
           MAT NPFDLLGDDDAEDPSQL+A KQ AA    P K S  P   +  A+ A+ +KPA+LP
Sbjct: 1   MATTNPFDLLGDDDAEDPSQLMAVKQAAAA---PKKGSDHPQAKQQAAAAAKLSKPANLP 60

Query: 61  SKPLPPAQAVRESRNEGSRGGRGSGRGGGWGYGRGREGGGFDRDSANNENT--NAPEDGE 120
           SKPLPPAQAVRE++NEG RGGR SGRGG  GYGRGR  GGF+R+S NNE +  + PEDGE
Sbjct: 61  SKPLPPAQAVREAKNEGGRGGRSSGRGGR-GYGRGRGSGGFNRESPNNEYSFSSNPEDGE 120

Query: 121 GGKTTERRG-YGAPRGRGGRRGGFNNGEAADGERPRRTFERHSGTGRGNEFKREGSGRGN 180
            G+TTE+RG YG PRGRGGRRGGF NG+ ADGERPR  FERHSGTGRGNEFKREGSGRGN
Sbjct: 121 TGRTTEKRGGYGGPRGRGGRRGGFYNGDTADGERPRGAFERHSGTGRGNEFKREGSGRGN 180

Query: 181 WGRSTDEFAEVAEEAVNETEKNVGDEKPIQEDDTSGVNTENPAKEPEETEPEDKEMTLEE 240
           WGRS +EF EVAEEA NE++K +GDEKP+ EDDT+GVNTENPAKE EE EPEDKEMTLEE
Sbjct: 181 WGRSAEEFPEVAEEA-NESQK-LGDEKPVHEDDTAGVNTENPAKESEEKEPEDKEMTLEE 240

Query: 241 YEKLLEDKRKALLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKLGSEKDKRKELADKE 300
           YEKLL++KRK+LLALKTEERKVDPKEFAS+QQLSSKK+N DIFIKLGS+KDKRKE ADKE
Sbjct: 241 YEKLLDEKRKSLLALKTEERKVDPKEFASLQQLSSKKENQDIFIKLGSDKDKRKETADKE 299

[Close]

BLAST of Lsi09G016940 vs. NCBI nr
Match: gi|596001314|ref|XP_007218155.1| (hypothetical protein PRUPE_ppa007410mg [Prunus persica])

HSP 1 Score: 348.2 bits (892), Expect = 1.6e-92
Identity = 216/313 (69.01%), Postives = 246/313 (78.59%), Query Frame = 1


Query: 1   MATVNPFDLLGDDDAEDPSQLIAAKQVAAVTAPPSKKSPAQTKPVASGAQPNKPASLPSK 60
           MAT+NPFDLLGDDDAEDPSQL+AA+Q   + A P K  PAQ K  A G Q  KPA LPSK
Sbjct: 1   MATMNPFDLLGDDDAEDPSQLLAAQQ-QKLAAAPKKALPAQNKSGAQG-QETKPAKLPSK 60

Query: 61  PLPPAQAVRESRNEGSRGGRGSGRGGGWGYGRGREGGGFDRDSANNENT----NAP---- 120
           P PPAQAVRE+RNE   GGRG GRG G+GY RGR GGG++R+S NNENT     AP    
Sbjct: 61  PAPPAQAVREARNEAG-GGRGGGRGRGYGYSRGRGGGGYNRESPNNENTFTNSGAPAGQG 120

Query: 121 --EDGEGGKTTERRGYGAPRG--RGGRRGGFNNGEAADGERPRRTFERHSGTGRGNEFKR 180
             EDG+G ++ ERRGYG PRG  RGGRRGGF NGE +DGERPRR FER SGTGRG+E KR
Sbjct: 121 AFEDGDGNQS-ERRGYGGPRGPYRGGRRGGFGNGEVSDGERPRRVFERRSGTGRGSEIKR 180

Query: 181 EGSGRGNWGRSTDEFAEVAEEAVNETEKNVGDEKPIQEDDTSGVNTENPAKEPEETEPED 240
           EGSGRGNWG  TDE ++V EE  N TE+N+GDEKP+ E D +  N E PA EPEE EPED
Sbjct: 181 EGSGRGNWGSETDELSQVIEEVANVTERNLGDEKPVGEVDAADGNKETPANEPEEKEPED 240

Query: 241 KEMTLEEYEKLLEDKRKALLALKT-EERKVDPKEFASMQQLSSKKDNNDIFIKLGSEKDK 300
           KEMTLEEYEK+LE+KRKAL ALKT EERKVD KEFAS+QQLS+KK N+DIFIKLGS+KDK
Sbjct: 241 KEMTLEEYEKVLEEKRKALQALKTSEERKVDTKEFASLQQLSNKKGNDDIFIKLGSDKDK 300

The following BLAST results are available for this feature:

BLAST of Lsi09G016940 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi09G016940 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K9Z4_CUCSA	1.2e-136	90.46	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G106180 PE=4 SV=1	[more]
A0A0A0KCI2_CUCSA	7.4e-105	76.39	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G105680 PE=4 SV=1	[more]
M5X0A0_PRUPE	1.1e-92	69.01	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007410mg PE=4 SV=1	[more]
D7SLZ5_VITVI	2.3e-90	67.83	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0021g01420 PE=4 SV=...	[more]
A0A151RAW5_CAJCA	2.3e-90	64.81	Uncharacterized protein OS=Cajanus cajan GN=KK1_038893 PE=4 SV=1	[more]

BLAST of Lsi09G016940 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G16830.1	3.8e-60	55.66	Hyaluronan / mRNA binding family	[more]
AT4G17520.1	7.4e-56	51.29	Hyaluronan / mRNA binding family	[more]
AT5G47210.1	2.3e-49	47.80	Hyaluronan / mRNA binding family	[more]

BLAST of Lsi09G016940 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449445497\|ref\|XP_004140509.1\|	1.8e-136	90.46	PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein-like [Cucumis s...	[more]
gi\|659119706\|ref\|XP_008459799.1\|	5.2e-136	90.13	PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein-like [Cucumis m...	[more]
gi\|659119708\|ref\|XP_008459800.1\|	3.0e-107	77.05	PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein-like [Cucumis m...	[more]
gi\|449466564\|ref\|XP_004150996.1\|	1.1e-104	76.39	PREDICTED: cyclin-dependent kinase 13-like [Cucumis sativus]	[more]
gi\|596001314\|ref\|XP_007218155.1\|	1.6e-92	69.01	hypothetical protein PRUPE_ppa007410mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR019084	Stm1-like_N
IPR006861	HABP4_PAIRBP1-bd

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G016940.1	Lsi09G016940.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006861	Hyaluronan/mRNA-binding protein	PFAM	PF04774	HABP4_PAI-RBP1	coord: 150..257 score: 1.0
IPR006861	Hyaluronan/mRNA-binding protein	SMART	SM01233	HABP4_PAI_RBP1_2	coord: 150..258 score: 4.0
IPR019084	Stm1, N-terminal	PFAM	PF09598	Stm1_N	coord: 1..81 score: 9.5
None	No IPR available	unknown	Coil	Coil	coord: 233..256 scor
None	No IPR available	PANTHER	PTHR12299	HYALURONIC ACID-BINDING PROTEIN 4	coord: 1..300 score: 1.3E
None	No IPR available	PANTHER	PTHR12299:SF24	SUBFAMILY NOT NAMED	coord: 1..300 score: 1.3E

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi09G016940	Cucumber (Gy14) v1	cgylsiB170
Lsi09G016940	Cucumber (Gy14) v1	cgylsiB562
Lsi09G016940	Cucurbita maxima (Rimu)	cmalsiB331
Lsi09G016940	Cucurbita maxima (Rimu)	cmalsiB814
Lsi09G016940	Cucurbita moschata (Rifu)	cmolsiB320
Lsi09G016940	Cucurbita moschata (Rifu)	cmolsiB800
Lsi09G016940	Cucurbita pepo (Zucchini)	cpelsiB101
Lsi09G016940	Cucurbita pepo (Zucchini)	cpelsiB251
Lsi09G016940	Wild cucumber (PI 183967)	cpilsiB399
Lsi09G016940	Wild cucumber (PI 183967)	cpilsiB404
Lsi09G016940	Cucumber (Chinese Long) v2	culsiB396
Lsi09G016940	Cucumber (Chinese Long) v2	culsiB402
Lsi09G016940	Melon (DHL92) v3.5.1	lsimeB017
Lsi09G016940	Watermelon (Charleston Gray)	lsiwcgB029
Lsi09G016940	Watermelon (97103) v1	lsiwmB036
Lsi09G016940	Cucumber (Gy14) v2	cgyblsiB362
Lsi09G016940	Cucumber (Gy14) v2	cgyblsiB366
Lsi09G016940	Melon (DHL92) v3.6.1	lsimedB019
Lsi09G016940	Silver-seed gourd	carlsiB070
Lsi09G016940	Silver-seed gourd	carlsiB883
Lsi09G016940	Cucumber (Chinese Long) v3	cuclsiB420
Lsi09G016940	Cucumber (Chinese Long) v3	cuclsiB424
Lsi09G016940	Watermelon (97103) v2	lsiwmbB026
Lsi09G016940	Wax gourd	lsiwgoB011