Lsi09G016840 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi09G016840
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic
Location	chr09 : 25274610 .. 25285197 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCATCATAAAACTACATGGGTTTCCACTTCCACCAATTTTCCATAAGCTCTTTGAAAGAAGTACATTGCAGCCAAGAATTCTCAAACCGAAAAGGGCAAGGGCCCCAAGCAATGCCACCAAAGGTTATAGCCAAGGGGTATTGGTTTGAAGTGACCCTTTCTAGAGTAAGACATGCTGAACCAAATTTATTAAGCCAATCATTGGTTGGCCAGAATCTGTCTAATAAAGAAAGATATTGTTCCTCACAAAAACTAAACCACGTGTAACAACCATTTAGCAATTGGGTATCTTGAAGGTGATAGGTAGCAATCCACTCATTGAACGATCTCATACTTCTAGTAGTTGAGTGATCATGAGATTTCTCCCAAGATCAACGAGTCACATTAAAATCCCCTCCAAGAATCCTTCAATCACCCCCAATTCAGCCAAGCCATGAAGCTCTCGCCAAAAAACATCACAAAACTCGCTCCTAGATGTCCCAAAGATTGCCGTTAGCCGAAAACAAAAACCATCAGCCATAAATACATGAATAGAGATGGAATAAAAACCTTGTATAATCTCCTGAACTGTGAAATTAGGTTCACTGCATATAACAAGGATGTTCCTGGTAATTCCAGTCACATCAAGACATGCCCATCCACACCATGGGTTTGTTAATGTTTCCTGCAATTTTGGTTTACTTGTTGTTGTCCTTGTAATTTTAACAAATGGTTGTTTGACTCTGCAGTATTACATTTTTTTTGATGGAAAACAGTGGAGAACACATTCTACTTGACTTTTTGGTCGTTTTCCTGCTTTTCAAAATATATTCATATGTCAACTGCCATACCTATCATTGCTTTGCAGAAAAAGGAGAAGTCCACAGCGATCATTACAAGCTACTCCCTATTGACCTGCGCGATATTGATCAGTTAAATGATGTATTGGCTATTGCTGGTATGGATCCCAGGTATGAAAGCACAGAAGATTTTCCTCTTCGTGGTCCAGTTTTTAGAGTGCTTTAAACATCCTTAACTATTTGGTGGATCATTTGGGTCATTTGAAGTCATTTTTGAATCTTCATTATTGTTTCAACACTGTCTTATTTCATTCACGAGAATTGTTCTTTTAATGTCTTTTATGATGTGCTGACTCATCTCTGAACGTTGGTCTGCAATCTTTTTAATTATGGTGTCTCTGAGCCTGTGGGCCCGTGTGGGGGTAGATGGGGAGAGGGATATTTGGATGGATGAATGGGCTGTTTTGAGAGTGGGTTTGAACATTTGATGAATTCGACATTTTCCCTACTTTTTGGCTTCACATGGAAATTATTAATATCTTTTATCCTGATATTGTTATCAGTTTGCCGACATTTATAATTGCAGAATGCGTTTTGATATACTTGGATCCAGATTCGAGTCATGCTATAGTTGGTTGGGCATCAAAAGCATTTTCAACAGCAATATTTTTCTTATATGAGCAGGTTTTGCTTATCTGAACTCATACAAGTTTTGTATGTTGACATTTCTAGTGGAACTTCTTTCCTTTTGAATTCATTTGTATTCTTGATATCTCCCCTGGTACATGACTTTGTTTTAAATGATGGTTTGGTAACTTCCGACTACAATCTTTCAACAGATTCATCCAGATGATGCCTTTGGCCAACAAATGATCAGAAATTTAGAGGTATGGTTGTCTTTGATAGGCCACAAATTATGAATCTTTTCATTCATAGTCTATTCCCCCATTTTATTTTATTTATTAAAAACAAGCTTTCATTGAGAACAATGAAAGAAGGCTAAAGGGCATACAAGAAAACTAGCGAACAAAAAATGAAACTTTTCATTGAGAAATGAAAAGAGCCTAATGCTCAACTACTTAAAATTACATAAGATCTATGAAAACATTCTAATTAAAGCAAATATCCCAAAGAGAAAATCCTACAAAGCCTTTGAGAGAGAACACCAAGAGAAATAAACGAATACAAATTGGTACGTAAAAACACTAGTAAACAAGAAACAAAACTTATTCATTGAAGAAATGAAAGGAGACTAATGCTCAACTACTTAAAAATTACAAAGGATATATAAAAACATTTCGATTGAGGCAAATGTCTTGAAGAAAAAATCCAGCAAAGCCTTTGAGAGAGCACCAAGAGGAAGTCGAAAGACGAGCTGGCTCAAATTTGTCCAACTAAAAGAGTTGCTTGCTGTGGAAAAGTCTTTAAAAATATTTGTGAAAACCCACTTTGAGTATCTTCATTAGAGCCAATATGTACTAGTGAGAGGAAACCTAGAAGTTATAATCAACATTTTAAAAAAATCCTTCATACTTACAATATATCATTAAATGTTAAGGAAATCAAAACATGAAAAGCCCTAGGGTAGCTTGTCTGCCATTGCCAGACATAGCCACCAGTCCTCTTCCCAATCTCAACATCTTCATTCTCGCTCGTGAAGGTTTTCTCTCTACCCGATGGGCTAGCTTCCGTAGCGGTGCATCGTCGTCGATTCACCGTCAATATCGCCATCTTCCTTCGTCATTGCTCTCACTGTCATCCATCAGCTCTGTTGCCATTCGTCGAAAATTTCTCATTTTTTCCTTACTCTTTTTTTCAGTAAGAACATTTTTTCCTTACTTTTTTCCCATTTTCTTCCTGTCGCCTAGTCCATTCTTTCCCTTCCTCCCCTTTTTGTTTCGTTGCCGTCCCCGCCGCCACGACCTAGCCTTTTCTACTTCCATGGAGAAGATGAGTTGTTGTATCCGTAATCTTTATTTTTGCATTTGGTATGAATATGATATGGGTTTTGAAGAAAAAAAAAAAAAAAAAAATGAAGATTCCCCTCTCTCCATTTGATTTGATTCAATGGTTGAACTAATGCAAAATCTAATCTAATAGACATTGATTTTCGTGAGCAAATCAGGTATGCATCTAGGACTATCCGTTTGACCAAGTTTAGATCTCAAGGATGGAAACTTGAATGCGTTGTTTGGCCACCTTCTGAAGCTAGAAAGATATTACACGTAGCTATTGGTGTTGAAAATAAAAGTTGGTTCGTTTTGGGACATGATATGAGATTTTCTCTTAAAAGCTGAGAAAATCAGCACTCAACTTTCTTTTTTCCAAATCAAGTTGAGGAAGGAGAAATATTGCAGTCAAGTTATGTGAAAGTAGTACAAAAGAAGAGATTAATTGCTCTACTTTTTGAGGTTATTTTGTATCGAGTTATCTTTTAGATTTCAATACTATTTTAGTTGTTTGGGTTCTATTAGGGCTCGTTTGTTTCACAATTTTTGACATGGGATTTTAGACAGACATTTAGGGTTTGTTTGGTAGAGAATCCAGAGTCTGTTTTATGTTTTCAAATTCATTGTGTTCAGCAAATATGTGTTTGGCAGGTAACCCATATTCTATTTTTGAAAATTGTTTTAAGATTTTGTGATCCAAACAGTATAAATTCTGAAAACAACATTTTTATGTTTTCATTGTATCTAGATTTTGGATTTTAAGTTTTAAATTGTAGAATTACATTAAATAAAGATAAAAACATCTAGAAATAGTATGTCATGTTATAAACTCAATTCAATTTTTTCAAAAATAAGATATGTATTATGTAACGTATTATAAATTATATTATACTACAAAATAGTAACTATATAAGTTTTTTTTAAAAATAAATCATATTTATAAATAAATTAATAATAGTTTATTGTCAACTAAGTATTAGTGGATAATTACAACTAGTTTTATGATTTATAAAGATGGTATCAAACACATTTTAAACAATTGTTTAAATTAAAATCCAATTTCTAAATCTGCTACCAAACACATTTGAAAACATGAAATACAACTCTATTTTCATTGAATCCTTTGTTTTCAAATTCCCGTTTTCAGATTCTCTACCAAACAGGCCCTTATTATCATTGTTTGTTTCACAGGATTTCACTTTTAAACACCAAGGATATTATTATCTAGGGAACTTTAAAACCCATCTCACATAGGTTTTCTAATACCCTTCATTCATGTGGGATTTATATACCTGAGAGATTAACAGAAAAAATATAGCTGGAATAATTAATAAATCAATATCAATTAGTCTTTATTATTAATTTTAATTAGCTGGAACCCATCTGACATGAGTCCTCTCCTTTATTTTTGTGGGCTTGGTTTTTTGTATGCCATGTATTCTCTCATTTTTTCTCAATGAAAGTGGTTGTTTTCATAGGAAAAAAAACTATTAAATTTAAATATATTATTTAGACTTAATAAATTTTAACTAATACATTTACCATTGATATTTTATGTTATCTTAACTATTTTAAATGAAATTTTATTATTAATTATTAATAGGGCTCTTTCCCAATATAGAAAAATGAGCCAAACTATTTATAAATATAGAAAATTTTTACCGTCTATCACTGATAGATCGCGATAGAATTCTATTGCTTTTTATCGCTTAGGCGATAGAATTTATTTGCTTGAGCGATAGAAAACGATAGAATTCTATCGCGGTCTATCACTGATAGACAGTGAAATTTTTCTATATTTGTAAATAGTTTGATATTTTTTCTGTTTATAGTAATTTTCCCTTATTAATATTCTAATTAATTCATATTTATTTAATTATTTTTATTAATTAAATAAAATAACTAAATTAATGTTTAATATAAAAAATATTCATTTATTTTTATTTTCAGGTGATTAAATAAATAATTAATATAACAATATATTAAATAATGCTAAATTTAATTTGACTACATTACTTGTTCTCTTACATTTAATTAAGTAATTATTTATTTTGTTTTCTATTTACAAAATTGGTAAATCAAACACATATATTTAACTTCGAGACATTACGACCTTACTTGAATAGGATCTTGTGAGAGTCGAAGCCCCCAAAGGAGAATTGGGCATTTTTTTGATAGGGGATCAGGGTGGTTTTCCTTGGAGATGGAAAATTCGCCCGTCGGGTTTTATCAATTTGCAAATTCTTCCTCAGTTAGTTAAAAGAATGAAATTGGCTGATATTATGACAATACTAGGTAGCATAGATATCATTATGGGAGAAGTTGATCGTTAAAATGATAATTGATACATCACAAGTCCAAGATATCAATTCTTTTTCGAGATTGGAATTCTTAAAAGAAGTCTATGGAATTCTATAGGTTGTACAACTGTGCTCCTGAGTTCTAAAAACTTCGAGACATTAATTATCTGACATATATATCCAAACATATACATTAATTATCTCAGACCTTTAAAACCCAGGCATTTAAATCCTAAATATTTAACATCTGGGATCCTAATGGGCCCTATTAGAGTCACATCCAGATATTGAAAATTTGGTTTCCATATCAAATTGTCTGATCGTATAGGATTTTAAAACGCAACAGATAGCTACACGTGTATGTAAACTCCTGCTTTCTCAAAAATGTTATATAGATATTTTCACTCAATGTTGGCATTATATAGTCAGTAGATATCTGTGACTATGTGGTTCCAAGATTGTCTGATCTACTCATTCAGATGAAAGAATTTAATATATCTGTGAACATTATTGATTCAGAGTCGAGGCTGTGCTTTGTTGGGTATCATTGCTACACCAACATTACTTGCAAAGAAAAAGCTTTTTCTTGACCAAGGATGGCAGGTAATTTTTCTGTTTTGCAATAAAATGAGGCTGAAATACTACATGTTCCCCTTCTCATTGGCATAGTTCCCTTTATTATTCAATTAGCTTTGTGATAGAAATCAAATAACTGACATCATATTGAAAAATAAAAAGATAGAACACTGACACCCCAAGTATTCAAGGTACTTGAAACTTCACCACTTGAGTATTTCCGCTCAATGCCTAAACCAACTAAACTATTCCTTGGCTTCATCTCCTCCCATTCCCTCTATTTGTTCTCTCTCTTTATAACTAATTCCATGGTTAATGACGGATATTCCCTTAGTACCCTAATAATATTTATTATCCTTGTGGTATTCCTAAATCCTAACACATTGACACATCATGCTCCTGGTAATAATGAATTTGCAAAGCTTTTACTGTAGAAAAATTTGATGTCTTAAACCATTTTGACTGAAGTATTAATAGTTGTTCACAATGGCTTACACTTGGTAAAAGCCTTGGAACAAGTGCTCTCCCCTAGATAATTTAATTGTCTGAAAGCACTTTTTTTTGGTTATTTATTGATATTATGTAGGGAACATTTTGGTGGATTGTCCATTTGTGGGACTTAGGGAGAGTGACAACCCTCTCAAAAGGCTAATTGTTATATTGTAATTTTTCTTTGATGTTATGGCATATTACTGTGTTTTCTTGTGTTTGAAAACCTAACAAACCCATCATGGGATCAATTTTCCTTAGAAGATGATATAATATTAAATTTACCTTCACCCATCAGCTTAAGCTTTTGGGTAAATCAGTGATTTAACATGATATTAGAGCAGGTGGTTCAGGAGATCTCGTGTTCAAACCCCTGGAATATTTTTCCTTCCCAATTAATATTGATTTTCATTTGTTGGGTCTTCTACATATTTCAAGCGCACAAGTGAAGGGATGTGTCAGATGATATAAAATTACCCATTAACTTTTGGGTCAATTGGTTATTGAACATTCCCCACTTCTTTTTCCTTTTAACTAAAACCAAATAGAACCATATTATCTTATACATATTTCCAGAGCTACAATGGTCTACAAGTAGTCATGAAGCTGGTTTTTTTCTGTGGTGGTTAGCTTTTCATCTTGTTCTAGATGAAGATTGTGATGTGTGGTATCCTGTGATGTTCTCTTTAGTGACAATACATTCTACATTCCTGTAAATTTATTGTATGTATGTATAAACTTATTCCCGACCTATTTAATCTGTTTTTGGTTTTAATTATTTAATGAAGACTCTATTTGAATATTGTCTCTTTTGGTTGATAGACAGCTGCAGCATGGGACATGCTGAAAGTGTATAATAACTTGATTGAAGCTCAGGATAGACGAAGGTTTTTGTTTAAGAGTGGTTTTAGCCATTCTCCTTTGTTTATCTATTGTTGTCAATCTGATGCTATGGTTTGTTTAGTGGTTCATTCCTATGATTTTTGATACATTGATAAACTTGCTCGTGGAAGAAAAAGATGGAATCAAATGAATGAAATATATGAATGAAACTTGCTCCTTTTGTGGGCTTGTTTTTGTATGCCCTTATACATTATTTCATTTTTCTCCGGTGGAAGCTTAGTTCCTTCCCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCCCCCCCCCAAAAAAAAAAAAACAAGTTTGTTCAACAACAAAGTTCATTTTTACTAGCTACATTTTCAATTATCTCTAGTGAGATAGAAGGGGATTTTGTTTAGTATACAGATAAAGCCATGTCTCAAAACTTAAACTAATGTAGCTTTTTACTTGCAATTATTTTAATTATTTTTTTATTTGTTTTAGTAAGCTTTCTAGTTTCTAGTTACCTTAGGCCAAAATTGCCTCATAATTGAAATGACGTTGACTGAGAATTAAAATGAGATATGCGATGAAATATAATATATGCACGTCTCTATTGGACTTGCAAGGTCTTTGATGTGGTTATGTAAATGACCACTCCGAGGTTCAGTTTGAAGAATGAAGAGATGTTTGCACAGTAATAAACCTCGGGATCAGACTAATATTTGTATCAATTTGTCATATAGTCTAAGTATTTAACATATGTCATGCATTCAGCATGTGCCTTTTTGAAGGTTTTAAGTGATGTTTTATTTTCTTTCAAGAGTCATATGCTCTTGCTTCTTTCCTTCTTTGATTTTGCCTTTTTGTTCAAGATGTTTTCCAGGGAATATTTCATAAAATTTTATGTTTGGCATTTTTTTCTCTTTAGGATTGAACGGCTAGAGTTATTTGATGAATTTGAGGAGTGGCACATGATGCAGGCAAGTTTGTAACCTATTGTAATAATGAGAAAAGGCATGGGCGTTTGAATTCCCTTTCTTCTTTTCTTGCGTGTTCCCTGCTCAAACTGTTGAGATTTGAGTTTTTTCTTTAACTTATTGTCAGTTTCTTTCTTCAATGCCAAGATTTATTTTTCAATTTGTTGTCTTTTGACATTCCAGTAATGAATGTTGTTTCATTAGTTTTTAACTTGGTAAATCTTAAACATGTCTAATTCTCATTCCCATACAAGCATGTACTTTGATGTGAAGTTTGTACCTCCATTTTTGTATCACTTCAATTAGAATTTGTTCCGTTTTACTATTGGATTTCACTGTCATTTTTCCATTGAGATTTTTATTATTGCTTCTGCGCTATCTCCTATAGGCATCACTACTGGTGATTGGTGGGTTTTTCCCCCTTTCAACGCTGGGGTGAAAATTAATATGAATTAGACTATAGTTCCTAAGTGCCATGCTATTGCATTTGTATATCTTTTATCAAATTATTTTTTGAAAACGTCTTAATTGGATTGTTTTCAGGAGCATTATTGCGTGGCTTATGCAATCAATGATTCCCTGGTACGTTTATTTTGTGGCCATATTTGCTTTAATTTGTTCTTTTATGATTCCTTGTTAAGCGACTCCATGTTCTGGACGAACTTATGGCTATACTTTGTGAAGTGTAATGATCTTGCAATTCCTAGTATTGTCTCATAATGCTGGTATTAGACATATTTAATCATTTCCAGACCAAGCATTGTAGTCATTCCTCAAATTCAATTTGTTTATTCTTCTGGTCCTATTTACTTTCGGTCCACATTCTTTGTGGAAGTGTTTCTTTTTTACAAAAGATATTGAAAATTCGTTGATGGATGGCGGCATTACAGGGGGAAAAGTTTGATCTTTATCATCATTAATGCTGGCTCATAAGTTGAAGCACATGCGCATCTGGCCTCTTTTTGTGACCCATTTTACTAGCTTATGGACTGATTTGATTCTCTTGTGTGGTCACTTTTCCTTTACATATGTAGTGAACTGGCTTATCATGAATCTGTTTCATTACTATTTTCGGCTATAAATTCCACATATCTCCTTTTTCATGTAATGACATTTTCCTTTCAATCTAAACATTTGTGATTTGAACACTTCTTATCAAAATGAAGAAAATATCCAAAATGATTGAATTCTACCAACATGATTTATTTTATTTTATTTTAATTTTTAATTTTTCATGCAACTGTAACACGTTGGCTTTGATTATTTAATGATGAAACTTGACATATGTGTAATGTACTGTCACATAGTGGACAATGTGAATGGCTCAGCTAGATATTCGTGTCTTCTTGTCTTCATTTCATTTACTTCTCTTTCTTTTCCCGTTTGAAGGGGAAGATGAAAGGGCTAAGACCACAACAAGGACAGTGTCTTTTAAGTATAACTCTTCATCTGTTGCTTTCCTTTTTTTGACCCTAGGGGCTTTTTGGAAATTTCGGCTTTCCCCGGGACCAGCACGTGCTTGGCCCTCCCTCTCACCAGCATGAGATGTAAAGAGCTTCCTTCTGGCTGCTGCTGCTATTGACCAACTCTTCCAAGATTTGTTGAAGAATTTAATACTTGGAGTAGCACGTGCTGTTCAAACGTGCCATTACCTATACAAGCTGGGGAGATTATTTGCCAGGCTAAAAGATAAAAAGGTATTCTGGAAAACTTGACTCATATAAGTAATAACTCTCTCTCTATATATAAGTACGATGATCCTCAAATCCTCATGGTTTGGAAAATGCATCTATTTATATTTTGTTTGTGTTTGAGTTGCTGGAAGTTTGAAATTGAATTAATCTTTTTTCCCCCCTACTTGTGCTTGATTGAGTTAAGCCAGCTGTTTGGCAAATACAACATGGTGGGCCCTATGAGTTGAAGAATGTAGTAATGCCTATTTTGACTTGTGGGGACTGTGCCATGTGCCAAACATAATTTGCATTGTTGGCTCCTTTGCTTTATTACTCCACCATTCCCTTTTTTCTCATCTCTTTTTACATTGTTGGGGGATTGGATGAAGGAAAATGGTGCTACAATTTCACATTTGTTTATATATGCTCTATTATGCTTGCATTCTTATATG

mRNA sequence

TTCATCATAAAACTACATGGGTTTCCACTTCCACCAATTTTCCATAAGCTCTTTGAAAGAAGTACATTGCAGCCAAGAATTCTCAAACCGAAAAGGGCAAGGGCCCCAAGCAATGCCACCAAAGAAAAAGGAGAAGTCCACAGCGATCATTACAAGCTACTCCCTATTGACCTGCGCGATATTGATCAGTTAAATGATGTATTGGCTATTGCTGGTATGGATCCCAGTTTGCCGACATTTATAATTGCAGAATGCGTTTTGATATACTTGGATCCAGATTCGAGTCATGCTATAGTTGGAAATCAAAACATGAAAAGCCCTAGGGTAGCTTGTCTGCCATTGCCAGACATAGCCACCAGTCCTCTTCCCAATCTCAACATCTTCATTCTCGCTCGTGAAGGTTTTCTCTCTACCCGATGGGCTAGCTTCCGTAGCGGTGCATCGTCGTCGATTCACCGTCAATATCGCCATCTTCCTTCGTCATTGCTCTCACTGTCATCCATCAGCTCTGTTGCCATTCGTCGAAAATTTCTCATTTTTTCCTTACTCTTTTTTTCAGGTGGTTTTCCTTGGAGATGGAAAATTCGCCCGTCGGGTTTTATCAATTTGCAAATTCTTCCTCAGTTAGTTAAAAGAATGAAATTGGCTGATATTATGACAATACTAGGTAGCATAGATATCATTATGGGAGAAAGTCGAGGCTGTGCTTTGTTGGGTATCATTGCTACACCAACATTACTTGCAAAGAAAAAGCTTTTTCTTGACCAAGGATGGCAGACAGCTGCAGCATGGGACATGCTGAAAGTGTATAATAACTTGATTGAAGCTCAGGATAGACGAAGGATTGAACGGCTAGAGTTATTTGATGAATTTGAGGAGTGGCACATGATGCAGGCAAGCATCACTACTGGTGATTGGTGGGTTTTTCCCCCTTTCAACGCTGGGGAGCATTATTGCGTGGCTTATGCAATCAATGATTCCCTGGGGCTTTTTGGAAATTTCGGCTTTCCCCGGGACCAGCACGTGCTTGGCCCTCCCTCTCACCAGCATGAGATGTAAAGAGCTTCCTTCTGGCTGCTGCTGCTATTGACCAACTCTTCCAAGATTTGTTGAAGAATTTAATACTTGGAGTAGCACGTGCTGTTCAAACGTGCCATTACCTATACAAGCTGGGGAGATTATTTGCCAGGCTAAAAGATAAAAAGGTATTCTGGAAAACTTGACTCATATAAGTAATAACTCTCTCTCTATATATAAGTACGATGATCCTCAAATCCTCATGGTTTGGAAAATGCATCTATTTATATTTTGTTTGTGTTTGAGTTGCTGGAAGTTTGAAATTGAATTAATCTTTTTTCCCCCCTACTTGTGCTTGATTGAGTTAAGCCAGCTGTTTGGCAAATACAACATGGTGGGCCCTATGAGTTGAAGAATGTAGTAATGCCTATTTTGACTTGTGGGGACTGTGCCATGTGCCAAACATAATTTGCATTGTTGGCTCCTTTGCTTTATTACTCCACCATTCCCTTTTTTCTCATCTCTTTTTACATTGTTGGGGGATTGGATGAAGGAAAATGGTGCTACAATTTCACATTTGTTTATATATGCTCTATTATGCTTGCATTCTTATATG

Coding sequence (CDS)

TTCATCATAAAACTACATGGGTTTCCACTTCCACCAATTTTCCATAAGCTCTTTGAAAGAAGTACATTGCAGCCAAGAATTCTCAAACCGAAAAGGGCAAGGGCCCCAAGCAATGCCACCAAAGAAAAAGGAGAAGTCCACAGCGATCATTACAAGCTACTCCCTATTGACCTGCGCGATATTGATCAGTTAAATGATGTATTGGCTATTGCTGGTATGGATCCCAGTTTGCCGACATTTATAATTGCAGAATGCGTTTTGATATACTTGGATCCAGATTCGAGTCATGCTATAGTTGGAAATCAAAACATGAAAAGCCCTAGGGTAGCTTGTCTGCCATTGCCAGACATAGCCACCAGTCCTCTTCCCAATCTCAACATCTTCATTCTCGCTCGTGAAGGTTTTCTCTCTACCCGATGGGCTAGCTTCCGTAGCGGTGCATCGTCGTCGATTCACCGTCAATATCGCCATCTTCCTTCGTCATTGCTCTCACTGTCATCCATCAGCTCTGTTGCCATTCGTCGAAAATTTCTCATTTTTTCCTTACTCTTTTTTTCAGGTGGTTTTCCTTGGAGATGGAAAATTCGCCCGTCGGGTTTTATCAATTTGCAAATTCTTCCTCAGTTAGTTAAAAGAATGAAATTGGCTGATATTATGACAATACTAGGTAGCATAGATATCATTATGGGAGAAAGTCGAGGCTGTGCTTTGTTGGGTATCATTGCTACACCAACATTACTTGCAAAGAAAAAGCTTTTTCTTGACCAAGGATGGCAGACAGCTGCAGCATGGGACATGCTGAAAGTGTATAATAACTTGATTGAAGCTCAGGATAGACGAAGGATTGAACGGCTAGAGTTATTTGATGAATTTGAGGAGTGGCACATGATGCAGGCAAGCATCACTACTGGTGATTGGTGGGTTTTTCCCCCTTTCAACGCTGGGGAGCATTATTGCGTGGCTTATGCAATCAATGATTCCCTGGGGCTTTTTGGAAATTTCGGCTTTCCCCGGGACCAGCACGTGCTTGGCCCTCCCTCTCACCAGCATGAGATGTAA

Protein sequence

FIIKLHGFPLPPIFHKLFERSTLQPRILKPKRARAPSNATKEKGEVHSDHYKLLPIDLRDIDQLNDVLAIAGMDPSLPTFIIAECVLIYLDPDSSHAIVGNQNMKSPRVACLPLPDIATSPLPNLNIFILAREGFLSTRWASFRSGASSSIHRQYRHLPSSLLSLSSISSVAIRRKFLIFSLLFFSGGFPWRWKIRPSGFINLQILPQLVKRMKLADIMTILGSIDIIMGESRGCALLGIIATPTLLAKKKLFLDQGWQTAAAWDMLKVYNNLIEAQDRRRIERLELFDEFEEWHMMQASITTGDWWVFPPFNAGEHYCVAYAINDSLGLFGNFGFPRDQHVLGPPSHQHEM

Homology

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BLAST of Lsi09G016840 vs. Swiss-Prot
Match: NDHH_CUCSA (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Cucumis sativus GN=ndhH PE=3 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 6.1e-18
Identity = 44/45 (97.78%), Postives = 44/45 (97.78%), Query Frame = 1


Query: 187 GGFPWRWKIRPSGFINLQILPQLVKRMKLADIMTILGSIDIIMGE 232
           GGFPWRWKIRP GFINLQILPQLVKRMKLADIMTILGSIDIIMGE
Sbjct: 346 GGFPWRWKIRPPGFINLQILPQLVKRMKLADIMTILGSIDIIMGE 390

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BLAST of Lsi09G016840 vs. Swiss-Prot
Match: NDHH_OENGL (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Oenothera glazioviana GN=ndhH PE=3 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 3.9e-17
Identity = 43/44 (97.73%), Postives = 43/44 (97.73%), Query Frame = 1


Query: 188 GFPWRWKIRPSGFINLQILPQLVKRMKLADIMTILGSIDIIMGE 232
           GFPWRWKIRP GFINLQILPQLVKRMKLADIMTILGSIDIIMGE
Sbjct: 347 GFPWRWKIRPPGFINLQILPQLVKRMKLADIMTILGSIDIIMGE 390

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BLAST of Lsi09G016840 vs. Swiss-Prot
Match: NDHH_OENAR (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Oenothera argillicola GN=ndhH PE=3 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 3.9e-17
Identity = 43/44 (97.73%), Postives = 43/44 (97.73%), Query Frame = 1


Query: 188 GFPWRWKIRPSGFINLQILPQLVKRMKLADIMTILGSIDIIMGE 232
           GFPWRWKIRP GFINLQILPQLVKRMKLADIMTILGSIDIIMGE
Sbjct: 347 GFPWRWKIRPPGFINLQILPQLVKRMKLADIMTILGSIDIIMGE 390

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BLAST of Lsi09G016840 vs. Swiss-Prot
Match: NDHH_OENBI (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Oenothera biennis GN=ndhH PE=3 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 3.9e-17
Identity = 43/44 (97.73%), Postives = 43/44 (97.73%), Query Frame = 1


Query: 188 GFPWRWKIRPSGFINLQILPQLVKRMKLADIMTILGSIDIIMGE 232
           GFPWRWKIRP GFINLQILPQLVKRMKLADIMTILGSIDIIMGE
Sbjct: 347 GFPWRWKIRPPGFINLQILPQLVKRMKLADIMTILGSIDIIMGE 390

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BLAST of Lsi09G016840 vs. Swiss-Prot
Match: NDHH_CICAR (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Cicer arietinum GN=ndhH PE=3 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 3.9e-17
Identity = 43/44 (97.73%), Postives = 43/44 (97.73%), Query Frame = 1


Query: 188 GFPWRWKIRPSGFINLQILPQLVKRMKLADIMTILGSIDIIMGE 232
           GFPWRWKIRP GFINLQILPQLVKRMKLADIMTILGSIDIIMGE
Sbjct: 347 GFPWRWKIRPPGFINLQILPQLVKRMKLADIMTILGSIDIIMGE 390

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BLAST of Lsi09G016840 vs. TrEMBL
Match: D7SLY5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0021g01560 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 2.8e-38
Identity = 79/117 (67.52%), Postives = 90/117 (76.92%), Query Frame = 1


Query: 231 ESRGCALLGIIATPTLLAKKKLFLDQGWQTAAAWDMLKVYNNLIEAQDRRRIERLELFDE 290
           ESRGCALLGI  TPTLLAK+KLFLDQGWQ A AWDML++Y+N ++AQ+RRRIERLELFDE
Sbjct: 234 ESRGCALLGIYETPTLLAKEKLFLDQGWQRAVAWDMLRIYSNFVDAQERRRIERLELFDE 293

Query: 291 FEEWHMMQASITTGDWWVFPPFNAGEHYCVAYAINDSLGLFGNFGFPRDQHVLGPPS 348
           FEEWHMMQ                 EHYCVAYAIND++GL G+FGFP+D HV   PS
Sbjct: 294 FEEWHMMQ-----------------EHYCVAYAINDAMGLLGDFGFPKDDHVPCSPS 333

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BLAST of Lsi09G016840 vs. TrEMBL
Match: A0A067JY98_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14628 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 1.2e-36
Identity = 80/118 (67.80%), Postives = 89/118 (75.42%), Query Frame = 1


Query: 231 ESRGCALLGIIATPTLLAKKKLFLDQGWQTAAAWDMLKVYNNLIEAQDRRRIERLELFDE 290
           ESRGCALLGI  TPTLLAK++LFLDQGWQ   AWDML+VY++ IEAQ+RRRIERLELFDE
Sbjct: 238 ESRGCALLGIYDTPTLLAKERLFLDQGWQRVVAWDMLRVYSDFIEAQERRRIERLELFDE 297

Query: 291 FEEWHMMQASITTGDWWVFPPFNAGEHYCVAYAINDSLGLFGNFGFP-RDQHVLGPPS 348
           FEEWHMMQ                 EHYCVA AIND++GLFGNFGFP   QHV+  PS
Sbjct: 298 FEEWHMMQ-----------------EHYCVACAINDAMGLFGNFGFPTHQQHVISNPS 338

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BLAST of Lsi09G016840 vs. TrEMBL
Match: B9RCZ7_RICCO (Leucine carboxyl methyltransferase, putative OS=Ricinus communis GN=RCOM_1608280 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 3.5e-36
Identity = 79/113 (69.91%), Postives = 87/113 (76.99%), Query Frame = 1


Query: 231 ESRGCALLGIIATPTLLAKKKLFLDQGWQTAAAWDMLKVYNNLIEAQDRRRIERLELFDE 290
           ESRGCALLGI ATPTLLAK+KLFLDQGWQ A AWDML+VY++ IEAQ+RRRIERLELFDE
Sbjct: 237 ESRGCALLGIYATPTLLAKEKLFLDQGWQRAVAWDMLRVYSDFIEAQERRRIERLELFDE 296

Query: 291 FEEWHMMQASITTGDWWVFPPFNAGEHYCVAYAINDSLGLFGNFGFP-RDQHV 343
           FEEWHMMQ                 EHYCV +AIND++GLFGN GFP   QHV
Sbjct: 297 FEEWHMMQ-----------------EHYCVTFAINDAMGLFGNLGFPTHQQHV 332

[Close]

BLAST of Lsi09G016840 vs. TrEMBL
Match: U5FSI2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s04660g PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 7.7e-36
Identity = 79/118 (66.95%), Postives = 89/118 (75.42%), Query Frame = 1


Query: 231 ESRGCALLGIIATPTLLAKKKLFLDQGWQTAAAWDMLKVYNNLIEAQDRRRIERLELFDE 290
           ESRGCALLGI  TPTLLAK+KLFLDQGWQ A AWDMLKVY + IEA++RRRIERLELFDE
Sbjct: 239 ESRGCALLGIYDTPTLLAKEKLFLDQGWQRAVAWDMLKVYTDFIEAKERRRIERLELFDE 298

Query: 291 FEEWHMMQASITTGDWWVFPPFNAGEHYCVAYAINDSLGLFGNFGFPRDQ-HVLGPPS 348
           FEEW+MMQ                 EHYCVAYAIND++G FG+FGF + Q HV+  PS
Sbjct: 299 FEEWYMMQ-----------------EHYCVAYAINDAMGFFGDFGFTKTQPHVINSPS 339

[Close]

BLAST of Lsi09G016840 vs. TrEMBL
Match: A0A059CFD6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D01230 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 1.0e-35
Identity = 80/118 (67.80%), Postives = 88/118 (74.58%), Query Frame = 1


Query: 231 ESRGCALLGIIATPTLLAKKKLFLDQGWQTAAAWDMLKVYNNLIEAQDRRRIERLELFDE 290
           ESRGCALLGI ATPTL AK+ LF+D GWQ A AWDMLKVY++ IEAQ+RRRIERLE+FDE
Sbjct: 253 ESRGCALLGIHATPTLSAKENLFIDLGWQRATAWDMLKVYSSFIEAQERRRIERLEIFDE 312

Query: 291 FEEWHMMQASITTGDWWVFPPFNAGEHYCVAYAINDSLGLFGNFGFP--RDQHVLGPP 347
           FEEWHMMQ                 EHYCVAYAINDS+GLFG+FGFP  RDQ  L  P
Sbjct: 313 FEEWHMMQ-----------------EHYCVAYAINDSMGLFGDFGFPKERDQQPLQSP 353

[Close]

BLAST of Lsi09G016840 vs. TAIR10
Match: AT1G02100.3 (AT1G02100.3 Leucine carboxyl methyltransferase)

HSP 1 Score: 147.9 bits (372), Expect = 1.2e-35
Identity = 68/109 (62.39%), Postives = 82/109 (75.23%), Query Frame = 1


Query: 231 ESRGCALLGIIATPTLLAKKKLFLDQGWQTAAAWDMLKVYNNLIEAQDRRRIERLELFDE 290
           ESRGCALL I A+PTLLAK++LFLD GWQ A AWDMLKVY + ++ Q++RRIERLELFDE
Sbjct: 228 ESRGCALLSIDASPTLLAKERLFLDNGWQRAVAWDMLKVYGSFVDTQEKRRIERLELFDE 287

Query: 291 FEEWHMMQASITTGDWWVFPPFNAGEHYCVAYAINDSLGLFGNFGFPRD 340
           FEEWHMMQ                 EHYCV YA+ND++G+FG+FGF R+
Sbjct: 288 FEEWHMMQ-----------------EHYCVTYAVNDAMGIFGDFGFTRE 319

[Close]

BLAST of Lsi09G016840 vs. TAIR10
Match: ATCG01110.1 (ATCG01110.1 NAD(P)H dehydrogenase subunit H)

HSP 1 Score: 89.4 bits (220), Expect = 4.9e-18
Identity = 42/44 (95.45%), Postives = 43/44 (97.73%), Query Frame = 1


Query: 188 GFPWRWKIRPSGFINLQILPQLVKRMKLADIMTILGSIDIIMGE 232
           GFPWRWKIRP GFINLQILP+LVKRMKLADIMTILGSIDIIMGE
Sbjct: 347 GFPWRWKIRPPGFINLQILPELVKRMKLADIMTILGSIDIIMGE 390

[Close]

BLAST of Lsi09G016840 vs. NCBI nr
Match: gi|659119671|ref|XP_008459781.1| (PREDICTED: tRNA wybutosine-synthesizing protein 4 [Cucumis melo])

HSP 1 Score: 203.4 bits (516), Expect = 6.7e-49
Identity = 99/122 (81.15%), Postives = 102/122 (83.61%), Query Frame = 1


Query: 231 ESRGCALLGIIATPTLLAKKKLFLDQGWQTAAAWDMLKVYNNLIEAQDRRRIERLELFDE 290
           ESRGCALLGI ATP+LLAKK LFLDQGWQTAAAWDMLKVYNNLIEAQ+RRRIERLELFDE
Sbjct: 236 ESRGCALLGINATPSLLAKKNLFLDQGWQTAAAWDMLKVYNNLIEAQERRRIERLELFDE 295

Query: 291 FEEWHMMQASITTGDWWVFPPFNAGEHYCVAYAINDSLGLFGNFGFPRDQHVLGPPSHQH 350
           FEEWHMMQ                 EHYCVAYAINDSLGLFGNFGFP+DQHVL PPSHQH
Sbjct: 296 FEEWHMMQ-----------------EHYCVAYAINDSLGLFGNFGFPQDQHVLDPPSHQH 340

Query: 351 EM 353
           EM
Sbjct: 356 EM 340

[Close]

BLAST of Lsi09G016840 vs. NCBI nr
Match: gi|449445505|ref|XP_004140513.1| (PREDICTED: tRNA wybutosine-synthesizing protein 4 [Cucumis sativus])

HSP 1 Score: 187.6 bits (475), Expect = 3.8e-44
Identity = 92/116 (79.31%), Postives = 95/116 (81.90%), Query Frame = 1


Query: 231 ESRGCALLGIIATPTLLAKKKLFLDQGWQTAAAWDMLKVYNNLIEAQDRRRIERLELFDE 290
           ESRGCALLGI ATP+LLAKK LFLDQGWQTAAAWDMLKVY NLIEAQ+RRRIERLELFDE
Sbjct: 236 ESRGCALLGINATPSLLAKKNLFLDQGWQTAAAWDMLKVYRNLIEAQERRRIERLELFDE 295

Query: 291 FEEWHMMQASITTGDWWVFPPFNAGEHYCVAYAINDSLGLFGNFGFPRDQHVLGPP 347
           FEEWHMMQ                 EHYCVAYAINDSLGLFGNFGFP+DQHVL PP
Sbjct: 296 FEEWHMMQ-----------------EHYCVAYAINDSLGLFGNFGFPQDQHVLDPP 334

[Close]

BLAST of Lsi09G016840 vs. NCBI nr
Match: gi|297734612|emb|CBI16663.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 167.5 bits (423), Expect = 4.1e-38
Identity = 79/117 (67.52%), Postives = 90/117 (76.92%), Query Frame = 1


Query: 231 ESRGCALLGIIATPTLLAKKKLFLDQGWQTAAAWDMLKVYNNLIEAQDRRRIERLELFDE 290
           ESRGCALLGI  TPTLLAK+KLFLDQGWQ A AWDML++Y+N ++AQ+RRRIERLELFDE
Sbjct: 234 ESRGCALLGIYETPTLLAKEKLFLDQGWQRAVAWDMLRIYSNFVDAQERRRIERLELFDE 293

Query: 291 FEEWHMMQASITTGDWWVFPPFNAGEHYCVAYAINDSLGLFGNFGFPRDQHVLGPPS 348
           FEEWHMMQ                 EHYCVAYAIND++GL G+FGFP+D HV   PS
Sbjct: 294 FEEWHMMQ-----------------EHYCVAYAINDAMGLLGDFGFPKDDHVPCSPS 333

[Close]

BLAST of Lsi09G016840 vs. NCBI nr
Match: gi|225453390|ref|XP_002271322.1| (PREDICTED: tRNA wybutosine-synthesizing protein 4 [Vitis vinifera])

HSP 1 Score: 167.5 bits (423), Expect = 4.1e-38
Identity = 79/117 (67.52%), Postives = 90/117 (76.92%), Query Frame = 1


Query: 231 ESRGCALLGIIATPTLLAKKKLFLDQGWQTAAAWDMLKVYNNLIEAQDRRRIERLELFDE 290
           ESRGCALLGI  TPTLLAK+KLFLDQGWQ A AWDML++Y+N ++AQ+RRRIERLELFDE
Sbjct: 238 ESRGCALLGIYETPTLLAKEKLFLDQGWQRAVAWDMLRIYSNFVDAQERRRIERLELFDE 297

Query: 291 FEEWHMMQASITTGDWWVFPPFNAGEHYCVAYAINDSLGLFGNFGFPRDQHVLGPPS 348
           FEEWHMMQ                 EHYCVAYAIND++GL G+FGFP+D HV   PS
Sbjct: 298 FEEWHMMQ-----------------EHYCVAYAINDAMGLLGDFGFPKDDHVPCSPS 337

[Close]

BLAST of Lsi09G016840 vs. NCBI nr
Match: gi|802700375|ref|XP_012083696.1| (PREDICTED: tRNA wybutosine-synthesizing protein 4 [Jatropha curcas])

HSP 1 Score: 162.2 bits (409), Expect = 1.7e-36
Identity = 80/118 (67.80%), Postives = 89/118 (75.42%), Query Frame = 1


Query: 231 ESRGCALLGIIATPTLLAKKKLFLDQGWQTAAAWDMLKVYNNLIEAQDRRRIERLELFDE 290
           ESRGCALLGI  TPTLLAK++LFLDQGWQ   AWDML+VY++ IEAQ+RRRIERLELFDE
Sbjct: 238 ESRGCALLGIYDTPTLLAKERLFLDQGWQRVVAWDMLRVYSDFIEAQERRRIERLELFDE 297

Query: 291 FEEWHMMQASITTGDWWVFPPFNAGEHYCVAYAINDSLGLFGNFGFP-RDQHVLGPPS 348
           FEEWHMMQ                 EHYCVA AIND++GLFGNFGFP   QHV+  PS
Sbjct: 298 FEEWHMMQ-----------------EHYCVACAINDAMGLFGNFGFPTHQQHVISNPS 338

The following BLAST results are available for this feature:

BLAST of Lsi09G016840 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NDHH_CUCSA	6.1e-18	97.78	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Cucumis sativus GN=nd...	[more]
NDHH_OENGL	3.9e-17	97.73	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Oenothera glazioviana...	[more]
NDHH_OENAR	3.9e-17	97.73	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Oenothera argillicola...	[more]
NDHH_OENBI	3.9e-17	97.73	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Oenothera biennis GN=...	[more]
NDHH_CICAR	3.9e-17	97.73	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Cicer arietinum GN=nd...	[more]

BLAST of Lsi09G016840 vs. TrEMBL


Match Name	E-value	Identity	Description
D7SLY5_VITVI	2.8e-38	67.52	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0021g01560 PE=4 SV=...	[more]
A0A067JY98_JATCU	1.2e-36	67.80	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14628 PE=4 SV=1	[more]
B9RCZ7_RICCO	3.5e-36	69.91	Leucine carboxyl methyltransferase, putative OS=Ricinus communis GN=RCOM_1608280...	[more]
U5FSI2_POPTR	7.7e-36	66.95	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s04660g PE=4 SV=1	[more]
A0A059CFD6_EUCGR	1.0e-35	67.80	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D01230 PE=4 SV=1	[more]

BLAST of Lsi09G016840 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G02100.3	1.2e-35	62.39	Leucine carboxyl methyltransferase	[more]
ATCG01110.1	4.9e-18	95.45	ATCG01110.1 NAD(P)H dehydrogenase subunit H	[more]

BLAST of Lsi09G016840 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659119671\|ref\|XP_008459781.1\|	6.7e-49	81.15	PREDICTED: tRNA wybutosine-synthesizing protein 4 [Cucumis melo]	[more]
gi\|449445505\|ref\|XP_004140513.1\|	3.8e-44	79.31	PREDICTED: tRNA wybutosine-synthesizing protein 4 [Cucumis sativus]	[more]
gi\|297734612\|emb\|CBI16663.3\|	4.1e-38	67.52	unnamed protein product [Vitis vinifera]	[more]
gi\|225453390\|ref\|XP_002271322.1\|	4.1e-38	67.52	PREDICTED: tRNA wybutosine-synthesizing protein 4 [Vitis vinifera]	[more]
gi\|802700375\|ref\|XP_012083696.1\|	1.7e-36	67.80	PREDICTED: tRNA wybutosine-synthesizing protein 4 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0032259	methylation
GO:0055114	oxidation-reduction process

Vocabulary: **Molecular Function**
Term	Definition
GO:0008168	methyltransferase activity
GO:0051287	NAD binding
GO:0048038	quinone binding
GO:0016651	oxidoreductase activity, acting on NAD(P)H

Vocabulary: **INTERPRO**
Term	Definition
IPR007213	Ppm1/Ppm2/Tcmp
IPR001135	NADH_Q_OxRdtase_suD

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005829	cytosol
molecular_function	GO:0051287	NAD binding
molecular_function	GO:0048038	quinone binding
molecular_function	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0016651	oxidoreductase activity, acting on NAD(P)H

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G016840.1	Lsi09G016840.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001135	NADH-quinone oxidoreductase, subunit D	PFAM	PF00346	Complex1_49kDa	coord: 188..231 score: 1.7
IPR007213	Methyltransferase Ppm1/Ppm2/Tcmp	PANTHER	PTHR13600	LEUCINE CARBOXYL METHYLTRANSFERASE	coord: 316..345 score: 6.7E-45coord: 24..120 score: 6.7E-45coord: 218..298 score: 6.7
IPR007213	Methyltransferase Ppm1/Ppm2/Tcmp	PFAM	PF04072	LCM	coord: 41..99 score: 5.0

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi09G016840	Wax gourd	lsiwgoB011
Lsi09G016840	Cucumber (Gy14) v1	cgylsiB170
Lsi09G016840	Cucumber (Gy14) v1	cgylsiB562
Lsi09G016840	Cucurbita maxima (Rimu)	cmalsiB331
Lsi09G016840	Cucurbita maxima (Rimu)	cmalsiB814
Lsi09G016840	Cucurbita moschata (Rifu)	cmolsiB320
Lsi09G016840	Cucurbita moschata (Rifu)	cmolsiB800
Lsi09G016840	Cucurbita pepo (Zucchini)	cpelsiB101
Lsi09G016840	Cucurbita pepo (Zucchini)	cpelsiB251
Lsi09G016840	Wild cucumber (PI 183967)	cpilsiB399
Lsi09G016840	Wild cucumber (PI 183967)	cpilsiB404
Lsi09G016840	Cucumber (Chinese Long) v2	culsiB396
Lsi09G016840	Cucumber (Chinese Long) v2	culsiB402
Lsi09G016840	Melon (DHL92) v3.5.1	lsimeB017
Lsi09G016840	Watermelon (Charleston Gray)	lsiwcgB029
Lsi09G016840	Watermelon (97103) v1	lsiwmB036
Lsi09G016840	Cucumber (Gy14) v2	cgyblsiB362
Lsi09G016840	Cucumber (Gy14) v2	cgyblsiB366
Lsi09G016840	Melon (DHL92) v3.6.1	lsimedB019
Lsi09G016840	Silver-seed gourd	carlsiB070
Lsi09G016840	Silver-seed gourd	carlsiB123
Lsi09G016840	Cucumber (Chinese Long) v3	cuclsiB420
Lsi09G016840	Cucumber (Chinese Long) v3	cuclsiB424
Lsi09G016840	Watermelon (97103) v2	lsiwmbB026