Lsi09G016600 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi09G016600
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionCentrin-1
Locationchr09 : 25013518 .. 25019848 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGTTTTGTATCCTTTCTTTGAGTTTTTTGGTGGATTACCAAGTATGCCAAAAGCATCGTTCAGACTTCAATTGGGAAGGACCCACAGCCCACCAGCCTGATTGTAAGAAAGAAGTCCTGTTTGGTCTGTCTTTATATCTAGGAATTACTTTCTTTGGCTGAAATTTGGAAGGGATTTGAGGAGGAGTAATAGCTCTTATTCTCTCCTTGAGAAGGAAAATCATCTATCAAGTAAAGGAATGATGACTAGCCCTTTTTGTTTTCTCGTGATGGAATCAAGATTCTGTTTTTACCTCATTTGTATCCAATTTGGTGATTTTTGGCCAAGTATTGCCTCTTGTGTGGAAGCTTTTCATCCCATATTAGCTTGTAGTAGTCAACTAACCACTAACCAGTACGTGGTTCCCCAATGGAGGGCGAAGGAAAAATCATATTATCTTGTCCATAGTTCATAAGGGAAGGGAGGTGTAGGTACGTGAGAAATGTGTTTCACACCCAAAGAATGTCGTTAGTTAGAATTGGGCTGTCGGTAGCAGGGTATTTAGATTGTTTTGTTTCTTTAGAGGAGTATCTTTTTTTCTGAATATTGTATCTGGTTTTCTGGAGAGAAAATGGGAGAGAAAGGGAAGCTCTCAAATCTTCTCTAGTTTATGTTTGATAAATAAAATTGTTGGTTGAGAAAATGAGACAAAGTCTCAATAATTGGCTAAGAGATCATGGGTTCAATCCATGGTGGCCATCTACCTAGGAATTAATTCCCTACGAGTTTCCTTGACACCCAAATGTTGTAGGGTCAGGCGGGTTGTCCCGTGAGATTAGTCGAGATGCGTGTAAGCTGACCTGGACACTCACGGATATCAAAATAAAAAATAAAATAAAATTGTTGGTTGAGGCGCTTCAGATTTCCTGTCAACAAAGATGGTGTGTTTTGAGTAGTTCCAAGTTTCCAACCCATTGGAAAGAGGAGGGTAGGGATTAGAAAATAAGGAGGGAGACTGCATTTTTGTACAAGAAATTTCCTCGGTTATAACTTGTATGTCATTACCCTTTTTCTCCTTTGGTTTTAATGAGAAACCTGAGGATAGCATTAATTGCTAAGGACCAAACAACCTAAGAGTTGGGGAAAAAGAACCCCTCATGAAGAGCTAACCACAATAAGACCTTCCAGTCATGAAGATATATGCCAGTGTCAATTGTATGCGATTTTATAATTTGAGTTGCTTATTCTCGAATACCTATCAGAGACCAAGAAATGGTGGTGTGGGCTAGTCTTGATGACTATCCATTTTGTTTTACCAGTCGAGAGAAATGACCATAAAAGATTGGTGCTGTAGAGTTCAGATCTACATACCTTATCTCCCTCTTTTTTTTGCGTACTTGTTCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCTTTTTTTTATAGATGAAAGCTTTCTAGTTTCCCAGAAAAGAACCTACCTTGGTTGGAAAACCATGTATTGTTTCTAGCTTCATTTTTTAGCACAGCCTTCCTTTATTTAAATGGCAATATATATTTAAAATGCCCTTCCCAAGAATTTATGATGTGTGGCTTCTATGAAGAATGGGTTTGTTAATCAGCATATTGGTCGACCTCATCCAGCAGTTGGGTTATACCGTTAAGAAGGTATTTGACTGATCATAAAGCTATAGAGTGGTTTGCCCTTCACAATCTTCTTGAGACTATTCGACCTTCAAATCTGAGGATTGAGGACTCTTAAGACTTGGACCCTTACCAAAAAAGGGTCGCTTTTCAGTGAATTGACGCTCGGGTTGTTTCCCTCGTGGTGCGTGGTGTAGAGAGGATTGTAAAAATCAGCAGCATTTATTTCTCTGTCCTTGGGCTGCTTCATTATGGGCTAATCTTTTCTGTATGTTTAGGCTTAATTGGTGCTTTTCTAGAAGGATTGATGAGGTTTTATTAGTTATTACAATTAATTTTTGAAACTCCTTTCAAGGAGAACAACCAAGTTCGTTGGTTTAATGCAGTTGCGGCTACTTTGTGGAAGCTTCGACTCTAAGAGAATCAAAGGATCTTCAAGAGCAATTGAATAGCCTCAATGAGACTTGGGGCTCTATTGAACTCTTTGCTTCCATTTGATGTTCTCTTTCTAAATTTTTTTGTAATTACAATCTTGTGCATATTTCGGCTAATTGGGAGTCTTTTAATTTGTAACTATGCTAATTGGGAGTCTTTTAATTTGTAACCTTTTGGCCTTTGTGGGGATAGCTTATCTCCCCCTATGTATGCCTCTTTTTACTCAATAGATTCATTCGTTTCTTGTCAATATATATATACATATATATTCAGGGCACTAGAAGAAGGGGGGCTCGTAGTCAAAACATTTATACTTTCTTTCATGGAGTCCTCACAAATATTTTTGGAAGTAGTAACTGGTGGTATGGAACAAGAGCACAAGTCTCAGTTTCACTTTTTAGAAGTAGAAAAAAAATGCTAATGTATGTTATTGCATTCAGGAAACTTGAGTCCTACCCAAAATGTATTTAAAAGGAAAATGTATTTTCTGCATATATTTTATGTACAATGTGAATTTCATCTATTTCAACACGTTATAATTGGTGGTCTGAAAAGTGGTTAAAATTTATTTTAGGGAAAGAATAGAGGTTCAGAAGCAAAAAGAAAAGTTTCTGTCAAGAAATCAAATAACTTCGATGATAAAGATGATGATGATGCCTTACGACAGGTAGATTCATAATATTCCATCAATACTTTGTAATACAAGACAGCACAAACACGCTAACTGTATCAATATAACTTCCCAAGCAGGCAATCAAACTTTCACTACGAGATTCTGGTGAAAATTCTGATGCACAGGTGCAAGGTCCTTTTGAAAATGTTAGAAGGAAAAATGTGAAGAATCAGGAAGTGAGAGGAGGGATGAAGAGAAAAGGATTGGTAGCTTTTTTACTCATAACGTAGTATGATAGCCTTGGTGATCCTTTATTCTTCTGTTATCTTAATGCTTCTTCTTCTCATCTGATCTGCAGTTCACTAGTCAGATGCAGATGAATGAGGATGAACTTATCATGAACTTCTATTGTTTTGATGGTATTTTATATATTGGTAAGATATTAATGCACTTTGAAGTAATTTTTACTACTGACCTGGTGAACTTGGCTAATAGAGTCATGGAAAGGGGGCATTACTGTTAATGACTTGAAAAGAGTGGCAGCTGCTCATGATTTTACTTGGTCTGACATAGAATTAAGGGATATGATTGATTGCTTTGACAGTGATGGAGATGGGAAGGTTAGTCTCTTGGATTCATGCTCTTCTTTCATCTCCCAATCCCATTCTTTTCATTATATGATGAATCGTAATCTTCAGGCAGTTTCGTAATCTAATATATATGTTCTTGATTTTGTCATTCAAGTTTTGAAATTTTTATTAATACTATCAAACTTGCCCATTATTTTAGAAATGTTCTTGGTCATCCCTCTAGCTACGTAAAAACATCAACGGGGGGGTATGATATGGTACATAATTAGTTGACTTGTTTAGAAAAAGATATCTTGACATCAATGACAATGATGGACATGAGATTAACCTTTTACATTGTGTTTACAAACTTCTTCAAGTTACAGTTTTTCAAAAAATTTGAAGCATCTTCTGTGCTTAATTTTTAAAACGAAACAAAATTTATCAAATATCTTTATGGTGGTGGTTCTGATAATGTGGTATGGTAGTTGGTACAAAAAAGATCAAAACGTTAGTAGTAACCTACCAAAGAAATAAGACTATGTAATTATTTTTTGGATAAGAAAATGAAATAAGAATAGTAAACCACCTCAATTTCAGCACCATCAGAAGGTTACAGATAGTCTTTGTGGGTTTATATCTCAAACTACAGGAATATTTTTCTAAAGGAAAATTTCATTGACCAGTTACTTATATGCATGTAGCTTGTTGTTTCAGCCAGTAAATATAACTACTTTGATCTACGATCATGACAAACTAATCTTGCTTGAATCCCAGCTTTGATACTCTTTCTGAGGTATACCTGTCCTTCATTTTCTTTTCCCTTACAGTTGAATCTGGATGATTTTCGGAGAATTGCTGGTCGATGTAACATGATAAAAGAGTCCATCACATGATTGACTCAGACAATGACAGACTGGTGCACCAGTGTGTGGAGGAGGATGTATAGCAAGAATTGAACAGGATCGTGATATCGATTCTCTCACCGTGCATTTTTCTAGGACAATCAAATGCAGGTATGCTCTTTATCCAACCATTCAGAAGCAAATTATGAGAATTGTTGCAGAGAGCATCAAAACTCTCTTGTTTGAAGAAAAAGCTCTAACGATCATCATTAGATAAGGGGGAATAATGGCTCCGATCGATAACAATATCTGATCATGATTTTGTTGAATTCCGAAGTATTATAGAGCATTTGAACTTGTCATAGTAATTTTGAAATGCTGATCCCACGTGTTTCAAGCTTTGAAATCTGTCTTTTAACTTTGAAACTCAGAGAAAAGATATATGATTGCATTTGACAGTGTCATGGGGCCTAGATTGTAATTTTCCTGTTGTACCAAGGGCATTTATTTAGGGTTCTTGCTTGTCAAAACTTACTGCTTTTTAAAATTTTGAGTTCTGGGAAAGCTGAATCTGAAATTGCAAGATCTTGATTCTTATGTCCGTTTGAAGGTTCATTGCTGTCTTCTGTCTCTGTTTGACATTATCCTGCTTAAGGATCATTTTGCTTATAGTGGTTCTTGTCAAAACTTACTCCTTAGTGAACTTGGTTCCTTCAAAAGCATATATTGATTTAAGAGAGATCATGAAAGTAGTAAAAGGCATGAATAAAATAAACATATTACATACACACATATTGATTCTATATATGAAAATTACATATCAAAACTTCCAATACACACACACATAAGTCTTGACTATATTAAGTAGTGATGAACAAACATAAAGAAGAGTAGTAAGAAGAAGATTATATGGTGGGGAATTAGTGAAGTGTATTAGATTATATATTGTATTATAATGTTGGAAGTAAGTAATAAAGTAACTAGAGAATTGGAATGGGAGAGTTGAGTTGAAAGGAGTGGATGAGATCAGAGTCAGGCAAGTTGAGAGGAGGCAATGAGAAATGGCTATAAGTAGAGCTTCCTCTTCTGATTTGCTCCATGCTGAGTAGAGCTGAAACTGTGTTTCTGAAAATTCCTTCACCACCAACTGAAATATTTGGCTTGTTTTTATGGTTGACTTGTTGTTGTTTGGGAGTTGGGAAAATTGCATCAATGCTAATCTCACAATCTTTGATCATCTTAGACACTGAATCTGTTTTGTAGAATGGCTGTTGGAGTATGTTTTGAATGAATGGTAGTCTTAGTAATCCCCCTGTTCTCTTGTCGTACTTCTTCAGAATTTTCCCCAA

mRNA sequence

ATGGGAATGGGTTTGTTAATCAGCATATTGGTCGACCTCATCCAGCAGTTGGGTTATACCGTTAAGAAGGGCACTAGAAGAAGGGGGGCTCGTAGTCAAAACATTTATACTTTCTTTCATGGAGTCCTCACAAATATTTTTGGAAGTAGTAACTGGTGGTATGGAACAAGAGCACAAGTCTCAGTTTCACTTTTTAGAAGTAGAAAAAAAATGCTAATGTATGGAAAGAATAGAGGTTCAGAAGCAAAAAGAAAAGTTTCTGTCAAGAAATCAAATAACTTCGATGATAAAGATGATGATGATGCCTTACGACAGGCAATCAAACTTTCACTACGAGATTCTGGTGAAAATTCTGATGCACAGGTGCAAGGTCCTTTTGAAAATGTTAGAAGGAAAAATGTGAAGAATCAGGAAGTGAGAGGAGGGATGAAGAGAAAAGGATTGTTCACTAGTCAGATGCAGATGAATGAGGATGAACTTATCATGAACTTCTATTGTTTTGATGAGTCATGGAAAGGGGGCATTACTGTTAATGACTTGAAAAGAGTGGCAGCTGCTCATGATTTTACTTGGTCTGACATAGAATTAAGGGATATGATTGATTGCTTTGACAGTGATGGAGATGGGAAGTTGAATCTGGATGATTTTCGGAGAATTGCTGGTCGATGTAACATGATAAAAGAGTCCATCACATGATTGACTCAGACAATGACAGACTGGTGCACCAGTGTGTGGAGGAGGATGTATAGCAAGAATTGAACAGGATCGTGATATCGATTCTCTCACCGTGCATTTTTCTAGGACAATCAAATGCAGGTATGCTCTTTATCCAACCATTCAGAAGCAAATTATGAGAATTGTTGCAGAGAGCATCAAAACTCTCTTGTTTGAAGAAAAAGCTCTAACGATCATCATTAGATAAGGGGGAATAATGGCTCCGATCGATAACAATATCTGATCATGATTTTGTTGAATTCCGAAGTATTATAGAGCATTTGAACTTGTCATAGTAATTTTGAAATGCTGATCCCACGTGTTTCAAGCTTTGAAATCTGTCTTTTAACTTTGAAACTCAGAGAAAAGATATATGATTGCATTTGACAGTGTCATGGGGCCTAGATTGTAATTTTCCTGTTGTACCAAGGGCATTTATTTAGGGTTCTTGCTTGTCAAAACTTACTGCTTTTTAAAATTTTGAGTTCTGGGAAAGCTGAATCTGAAATTGCAAGATCTTGATTCTTATGTCCGTTTGAAGGTTCATTGCTGTCTTCTGTCTCTGTTTGACATTATCCTGCTTAAGGATCATTTTGCTTATAGTGGTTCTTGTCAAAACTTACTCCTTAGTGAACTTGGTTCCTTCAAAAGCATATATTGATTTAAGAGAGATCATGAAAGTAGTAAAAGGCATGAATAAAATAAACATATTACATACACACATATTGATTCTATATATGAAAATTACATATCAAAACTTCCAATACACACACACATAAGTCTTGACTATATTAAGTAGTGATGAACAAACATAAAGAAGAGTAGTAAGAAGAAGATTATATGGTGGGGAATTAGTGAAGTGTATTAGATTATATATTGTATTATAATGTTGGAAGTAAGTAATAAAGTAACTAGAGAATTGGAATGGGAGAGTTGAGTTGAAAGGAGTGGATGAGATCAGAGTCAGGCAAGTTGAGAGGAGGCAATGAGAAATGGCTATAAGTAGAGCTTCCTCTTCTGATTTGCTCCATGCTGAGTAGAGCTGAAACTGTGTTTCTGAAAATTCCTTCACCACCAACTGAAATATTTGGCTTGTTTTTATGGTTGACTTGTTGTTGTTTGGGAGTTGGGAAAATTGCATCAATGCTAATCTCACAATCTTTGATCATCTTAGACACTGAATCTGTTTTGTAGAATGGCTGTTGGAGTATGTTTTGAATGAATGGTAGTCTTAGTAATCCCCCTGTTCTCTTGTCGTACTTCTTCAGAATTTTCCCCAA

Coding sequence (CDS)

ATGGGAATGGGTTTGTTAATCAGCATATTGGTCGACCTCATCCAGCAGTTGGGTTATACCGTTAAGAAGGGCACTAGAAGAAGGGGGGCTCGTAGTCAAAACATTTATACTTTCTTTCATGGAGTCCTCACAAATATTTTTGGAAGTAGTAACTGGTGGTATGGAACAAGAGCACAAGTCTCAGTTTCACTTTTTAGAAGTAGAAAAAAAATGCTAATGTATGGAAAGAATAGAGGTTCAGAAGCAAAAAGAAAAGTTTCTGTCAAGAAATCAAATAACTTCGATGATAAAGATGATGATGATGCCTTACGACAGGCAATCAAACTTTCACTACGAGATTCTGGTGAAAATTCTGATGCACAGGTGCAAGGTCCTTTTGAAAATGTTAGAAGGAAAAATGTGAAGAATCAGGAAGTGAGAGGAGGGATGAAGAGAAAAGGATTGTTCACTAGTCAGATGCAGATGAATGAGGATGAACTTATCATGAACTTCTATTGTTTTGATGAGTCATGGAAAGGGGGCATTACTGTTAATGACTTGAAAAGAGTGGCAGCTGCTCATGATTTTACTTGGTCTGACATAGAATTAAGGGATATGATTGATTGCTTTGACAGTGATGGAGATGGGAAGTTGAATCTGGATGATTTTCGGAGAATTGCTGGTCGATGTAACATGATAAAAGAGTCCATCACATGA

Protein sequence

MGMGLLISILVDLIQQLGYTVKKGTRRRGARSQNIYTFFHGVLTNIFGSSNWWYGTRAQVSVSLFRSRKKMLMYGKNRGSEAKRKVSVKKSNNFDDKDDDDALRQAIKLSLRDSGENSDAQVQGPFENVRRKNVKNQEVRGGMKRKGLFTSQMQMNEDELIMNFYCFDESWKGGITVNDLKRVAAAHDFTWSDIELRDMIDCFDSDGDGKLNLDDFRRIAGRCNMIKESIT
Homology
[Close]
BLAST of Lsi09G016600 vs. Swiss-Prot
Match: CETN1_BOVIN (Centrin-1 OS=Bos taurus GN=CETN1 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.2e-06
Identity = 28/69 (40.58%), Postives = 43/69 (62.32%), Query Frame = 1 

Query: 157 EDELIMNFYCFDESWKGGITVNDLKRVAAAHDFTWSDIELRDMIDCFDSDGDGKLNLDDF 216
           ++E++  F  FD+   G I+  +LKRVA       +D EL++MID  D DGDG++N D+F
Sbjct: 103 KEEILKAFRLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVNEDEF 162

Query: 217 RRIAGRCNM 226
            RI  + N+
Sbjct: 163 LRIMKKTNL 171

[Close]
BLAST of Lsi09G016600 vs. Swiss-Prot
Match: CATR_SPESI (Caltractin (Fragment) OS=Spermatozopsis similis PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 7.8e-06
Identity = 26/70 (37.14%), Postives = 43/70 (61.43%), Query Frame = 1 

Query: 156 NEDELIMNFYCFDESWKGGITVNDLKRVAAAHDFTWSDIELRDMIDCFDSDGDGKLNLDD 215
           + +E++  F  FD+   G IT  +LKRVA       +D E+++MID  D DGDG++N ++
Sbjct: 78  SREEIMKAFRLFDDDQTGKITFKNLKRVAKELGENLTDEEIQEMIDEADRDGDGEINEEE 137

Query: 216 FRRIAGRCNM 226
           F RI  + ++
Sbjct: 138 FFRIMKKTSL 147

[Close]
BLAST of Lsi09G016600 vs. Swiss-Prot
Match: CETN1_MOUSE (Centrin-1 OS=Mus musculus GN=Cetn1 PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 7.8e-06
Identity = 26/69 (37.68%), Postives = 44/69 (63.77%), Query Frame = 1 

Query: 157 EDELIMNFYCFDESWKGGITVNDLKRVAAAHDFTWSDIELRDMIDCFDSDGDGKLNLDDF 216
           ++E++  F  FD+   G I+  +LKRVA     + +D EL++MID  D DGDG++N ++F
Sbjct: 103 KEEILKAFRLFDDDETGKISFKNLKRVANELGESLTDEELQEMIDEADRDGDGEVNEEEF 162

Query: 217 RRIAGRCNM 226
            +I  + N+
Sbjct: 163 LKIMKKTNL 171

[Close]
BLAST of Lsi09G016600 vs. TrEMBL
Match: A0A0A0KDV1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G108450 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 1.9e-75
Identity = 143/157 (91.08%), Postives = 151/157 (96.18%), Query Frame = 1 

Query: 75  GKNRGSEAKRKVSVKKSNNFDDKDDDDALRQAIKLSLRDSGENSDAQVQGPFENVRRKNV 134
           GKNRGSE KRKVSVKKSNNF+ +DDDDAL+QAIKLSL+DSGENSDAQVQG FENVRRKN+
Sbjct: 130 GKNRGSETKRKVSVKKSNNFNHEDDDDALQQAIKLSLQDSGENSDAQVQGSFENVRRKNL 189

Query: 135 KNQEVRGGMKRKGLFTSQMQMNEDELIMNFYCFDESWKGGITVNDLKRVAAAHDFTWSDI 194
           KNQE RGGMKRKGLFTS+MQMNEDELIMNFYCFDESWKGGITV DLKRVA AHDFTWS+I
Sbjct: 190 KNQEARGGMKRKGLFTSRMQMNEDELIMNFYCFDESWKGGITVRDLKRVADAHDFTWSEI 249

Query: 195 ELRDMIDCFDSDGDGKLNLDDFRRIAGRCNMIKESIT 232
           ELRDMIDCFD+DGDGKLNLDDFRRIAGRCNMIKESIT
Sbjct: 250 ELRDMIDCFDNDGDGKLNLDDFRRIAGRCNMIKESIT 286

[Close]
BLAST of Lsi09G016600 vs. TrEMBL
Match: F6I3A6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g00230 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 9.5e-35
Identity = 86/168 (51.19%), Postives = 117/168 (69.64%), Query Frame = 1 

Query: 76  KNRGSEAKRKVSVKK-SNNFDDKDDDDALRQAIKLSLRDS-----------GENSDAQVQ 135
           KNR S+ K+KV V+K S+N +  DDDDAL+QAI LSL+D             ++SDA V 
Sbjct: 127 KNRTSKPKKKVPVQKISSNSEFVDDDDALKQAIALSLKDCPVATDRLQSGPSQSSDAGVL 186

Query: 136 GPFENVRRKNVKNQEVRGGMKRKGLFTSQMQMNEDELIMNFYCFDESWKGGITVNDLKRV 195
              ++ R+   + QE  G  KRK   TS++QM EDEL+++F+ FDE+ KGGIT+ DL+R+
Sbjct: 187 DDTKSERKGKAQIQEGSGRRKRKKPITSRVQMTEDELVIHFFQFDEAGKGGITLRDLQRM 246

Query: 196 AAAHDFTWSDIELRDMIDCFDSDGDGKLNLDDFRRIAGRCNMIKESIT 232
           A  HDFTW+D E+ DMI CFDSDGDGKL+L+DF++I  RCNM++ S T
Sbjct: 247 AYTHDFTWTDKEMADMIHCFDSDGDGKLSLEDFQKIVSRCNMLQRSET 294

[Close]
BLAST of Lsi09G016600 vs. TrEMBL
Match: M5X4Z3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026500mg PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 5.2e-33
Identity = 84/170 (49.41%), Postives = 114/170 (67.06%), Query Frame = 1 

Query: 67  SRKKMLMYGKNRGSEAKRKVSVKKSNNFDDKDDDDALRQAIKLSLRDSGENSDAQVQGPF 126
           SR+K +   KN+GS++K+ +     +N D  +DD+AL+QAI +SL+ S E S     GP 
Sbjct: 131 SRRKKV---KNKGSKSKKALPRSILSNNDFINDDEALKQAIAMSLQGSVEVSAVAHSGPL 190

Query: 127 ENVRRKNVKNQEVRG--------GMKRKGLFTSQMQMNEDELIMNFYCFDESWKGGITVN 186
           +     N K  E +G        G KRK  F S++QM EDEL+++F+ FDE+  GG+++ 
Sbjct: 191 QRPNVDNAKVNERKGNNQIPEDTGRKRKKSFASRLQMTEDELVLHFFQFDENCNGGLSLR 250

Query: 187 DLKRVAAAHDFTWSDIELRDMIDCFDSDGDGKLNLDDFRRIAGRCNMIKE 229
           DL+RVA AHDF W+D EL DMI CFDSDGDGKL+LD+FR+I  RCNMIKE
Sbjct: 251 DLQRVATAHDFMWTDKELADMIRCFDSDGDGKLSLDEFRKIVVRCNMIKE 297

[Close]
BLAST of Lsi09G016600 vs. TrEMBL
Match: A0A0D2QP81_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G089100 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 6.8e-33
Identity = 87/168 (51.79%), Postives = 115/168 (68.45%), Query Frame = 1 

Query: 66  RSRKKMLMYGKNRGSEAKRKVSVKK---SNNFDDKDDDDALRQAIKLSLRDSGENSDAQV 125
           +SRKK +   KN+GS +K+K SV+K   S++F D D DD L +AI LSL+DSGE     V
Sbjct: 128 QSRKKKM---KNKGSRSKKKASVQKHLSSSDFID-DGDDELMKAIALSLKDSGE-----V 187

Query: 126 QGPFEN-VRRKNVKNQEVRGGMKRKGLFTSQMQMNEDELIMNFYCFDESWKGGITVNDLK 185
            G     V+       +     KRK  FTS+MQM EDE++++F+ FDE+ KG I++ DL+
Sbjct: 188 LGAVPTVVQDATFTESKGNARSKRKKSFTSRMQMTEDEMVVHFFHFDEAGKGSISMRDLR 247

Query: 186 RVAAAHDFTWSDIELRDMIDCFDSDGDGKLNLDDFRRIAGRCNMIKES 230
           RVA AHDF W+D EL +MI CFD+DGDGKLNLDDFR+I  RCNM++ S
Sbjct: 248 RVAIAHDFMWTDKELAEMIQCFDTDGDGKLNLDDFRKIVSRCNMLRTS 286

[Close]
BLAST of Lsi09G016600 vs. TrEMBL
Match: W9QGY0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_020887 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 6.8e-33
Identity = 84/155 (54.19%), Postives = 104/155 (67.10%), Query Frame = 1 

Query: 76  KNRGSEAKRKVSVKKSNNFDDK-DDDDALRQAIKLSLRDSGENSDAQVQGPFENVRRKNV 135
           +N   ++K+KV+V+K +   D  DDDDAL+ AI LSL+D    +         NV     
Sbjct: 137 RNTVPKSKKKVAVRKMSTTPDYIDDDDALKMAIALSLQDKDGGTSGSSDRVSANVNETKG 196

Query: 136 KNQ--EVRGGMKRKGLFTSQMQMNEDELIMNFYCFDESWKGGITVNDLKRVAAAHDFTWS 195
           K Q  E     KRK  F S++QM EDELI++FY FDE+W  GI+V DL+RVA AHDFTW+
Sbjct: 197 KMQTKEDAWNKKRKKSFASRLQMTEDELILHFYQFDENWNDGISVRDLERVAKAHDFTWT 256

Query: 196 DIELRDMIDCFDSDGDGKLNLDDFRRIAGRCNMIK 228
           D EL DMI CFDSDGDGKL+LDDFR+IA RC MIK
Sbjct: 257 DEELYDMIRCFDSDGDGKLSLDDFRKIAVRCRMIK 291

[Close]
BLAST of Lsi09G016600 vs. TAIR10
Match: AT1G73440.1 (AT1G73440.1 calmodulin-related)

HSP 1 Score: 114.0 bits (284), Expect = 1.2e-25
Identity = 70/163 (42.94%), Postives = 95/163 (58.28%), Query Frame = 1 

Query: 69  KKMLMYGKNRGSEAKRKVSVKKSNNFDDK--DDDDALRQAIKLSLRDSGENSDAQVQGPF 128
           ++ L   KN+ S +KRKVS +K  N      +DDD L +AI LSL+ S   SD       
Sbjct: 109 EEFLCKRKNKSSASKRKVSSRKILNTSVSLGEDDDDLDKAIALSLQGSVAGSD------- 168

Query: 129 ENVRRKNVKNQEVRGGMKRKGLFTSQMQMNEDELIMNFYCFDESWKGGITVNDLKRVAAA 188
                     +E     K++    S+ QM +DEL+M F  FDE  KG IT+ D+ ++A  
Sbjct: 169 ----------KEAATMKKKRPELMSKTQMTQDELVMYFCQFDEGGKGFITLRDVAKMATV 228

Query: 189 HDFTWSDIELRDMIDCFDSDGDGKLNLDDFRRIAGRCNMIKES 230
           HDFTW++ EL+DMI CFD D DGKL+LD+FR+I  RC M+K S
Sbjct: 229 HDFTWTEEELQDMIRCFDMDKDGKLSLDEFRKIVSRCRMLKGS 254

[Close]
BLAST of Lsi09G016600 vs. TAIR10
Match: AT4G00140.1 (AT4G00140.1 Calcium-binding EF-hand family protein)

HSP 1 Score: 52.0 bits (123), Expect = 5.7e-07
Identity = 23/43 (53.49%), Postives = 30/43 (69.77%), Query Frame = 1 

Query: 169 ESWKGGITVNDLKRVAAAHDFTWSDIELRDMIDCFDSDGDGKL 212
           E  KG IT  D+ ++A  HDFTW++ EL+DMI  FD D DGK+
Sbjct: 91  EGGKGFITRRDVAKMATVHDFTWTEEELQDMIRSFDMDKDGKV 133

[Close]
BLAST of Lsi09G016600 vs. NCBI nr
Match: gi|449445469|ref|XP_004140495.1| (PREDICTED: uncharacterized protein LOC101206207 [Cucumis sativus])

HSP 1 Score: 290.4 bits (742), Expect = 2.7e-75
Identity = 143/157 (91.08%), Postives = 151/157 (96.18%), Query Frame = 1 

Query: 75  GKNRGSEAKRKVSVKKSNNFDDKDDDDALRQAIKLSLRDSGENSDAQVQGPFENVRRKNV 134
           GKNRGSE KRKVSVKKSNNF+ +DDDDAL+QAIKLSL+DSGENSDAQVQG FENVRRKN+
Sbjct: 130 GKNRGSETKRKVSVKKSNNFNHEDDDDALQQAIKLSLQDSGENSDAQVQGSFENVRRKNL 189

Query: 135 KNQEVRGGMKRKGLFTSQMQMNEDELIMNFYCFDESWKGGITVNDLKRVAAAHDFTWSDI 194
           KNQE RGGMKRKGLFTS+MQMNEDELIMNFYCFDESWKGGITV DLKRVA AHDFTWS+I
Sbjct: 190 KNQEARGGMKRKGLFTSRMQMNEDELIMNFYCFDESWKGGITVRDLKRVADAHDFTWSEI 249

Query: 195 ELRDMIDCFDSDGDGKLNLDDFRRIAGRCNMIKESIT 232
           ELRDMIDCFD+DGDGKLNLDDFRRIAGRCNMIKESIT
Sbjct: 250 ELRDMIDCFDNDGDGKLNLDDFRRIAGRCNMIKESIT 286

[Close]
BLAST of Lsi09G016600 vs. NCBI nr
Match: gi|659120420|ref|XP_008460184.1| (PREDICTED: uncharacterized protein LOC103499070 [Cucumis melo])

HSP 1 Score: 234.2 bits (596), Expect = 2.3e-58
Identity = 119/157 (75.80%), Postives = 128/157 (81.53%), Query Frame = 1 

Query: 75  GKNRGSEAKRKVSVKKSNNFDDKDDDDALRQAIKLSLRDSGENSDAQVQGPFENVRRKNV 134
           GKNRGSE K K   +       K     +       L+DSGEN DAQVQGPFENVRRK +
Sbjct: 130 GKNRGSEQKGKFLSRNQTTLTIK-----MMMMHYNRLQDSGENLDAQVQGPFENVRRKKM 189

Query: 135 KNQEVRGGMKRKGLFTSQMQMNEDELIMNFYCFDESWKGGITVNDLKRVAAAHDFTWSDI 194
           KNQE RG MKRKGLFTS+M MNEDELIMNFYCFDESWKGGITV+DLKRVAAAHDFTWS+I
Sbjct: 190 KNQEARGNMKRKGLFTSRMHMNEDELIMNFYCFDESWKGGITVSDLKRVAAAHDFTWSEI 249

Query: 195 ELRDMIDCFDSDGDGKLNLDDFRRIAGRCNMIKESIT 232
           ELRDMIDCFD+DGDG+LNLDDFRRIAGRCNMIKESIT
Sbjct: 250 ELRDMIDCFDNDGDGRLNLDDFRRIAGRCNMIKESIT 281

[Close]
BLAST of Lsi09G016600 vs. NCBI nr
Match: gi|296089207|emb|CBI38910.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 155.2 bits (391), Expect = 1.4e-34
Identity = 86/168 (51.19%), Postives = 117/168 (69.64%), Query Frame = 1 

Query: 76  KNRGSEAKRKVSVKK-SNNFDDKDDDDALRQAIKLSLRDS-----------GENSDAQVQ 135
           KNR S+ K+KV V+K S+N +  DDDDAL+QAI LSL+D             ++SDA V 
Sbjct: 116 KNRTSKPKKKVPVQKISSNSEFVDDDDALKQAIALSLKDCPVATDRLQSGPSQSSDAGVL 175

Query: 136 GPFENVRRKNVKNQEVRGGMKRKGLFTSQMQMNEDELIMNFYCFDESWKGGITVNDLKRV 195
              ++ R+   + QE  G  KRK   TS++QM EDEL+++F+ FDE+ KGGIT+ DL+R+
Sbjct: 176 DDTKSERKGKAQIQEGSGRRKRKKPITSRVQMTEDELVIHFFQFDEAGKGGITLRDLQRM 235

Query: 196 AAAHDFTWSDIELRDMIDCFDSDGDGKLNLDDFRRIAGRCNMIKESIT 232
           A  HDFTW+D E+ DMI CFDSDGDGKL+L+DF++I  RCNM++ S T
Sbjct: 236 AYTHDFTWTDKEMADMIHCFDSDGDGKLSLEDFQKIVSRCNMLQRSET 283

[Close]
BLAST of Lsi09G016600 vs. NCBI nr
Match: gi|731421279|ref|XP_010661681.1| (PREDICTED: uncharacterized protein LOC100262506 [Vitis vinifera])

HSP 1 Score: 155.2 bits (391), Expect = 1.4e-34
Identity = 86/168 (51.19%), Postives = 117/168 (69.64%), Query Frame = 1 

Query: 76  KNRGSEAKRKVSVKK-SNNFDDKDDDDALRQAIKLSLRDS-----------GENSDAQVQ 135
           KNR S+ K+KV V+K S+N +  DDDDAL+QAI LSL+D             ++SDA V 
Sbjct: 137 KNRTSKPKKKVPVQKISSNSEFVDDDDALKQAIALSLKDCPVATDRLQSGPSQSSDAGVL 196

Query: 136 GPFENVRRKNVKNQEVRGGMKRKGLFTSQMQMNEDELIMNFYCFDESWKGGITVNDLKRV 195
              ++ R+   + QE  G  KRK   TS++QM EDEL+++F+ FDE+ KGGIT+ DL+R+
Sbjct: 197 DDTKSERKGKAQIQEGSGRRKRKKPITSRVQMTEDELVIHFFQFDEAGKGGITLRDLQRM 256

Query: 196 AAAHDFTWSDIELRDMIDCFDSDGDGKLNLDDFRRIAGRCNMIKESIT 232
           A  HDFTW+D E+ DMI CFDSDGDGKL+L+DF++I  RCNM++ S T
Sbjct: 257 AYTHDFTWTDKEMADMIHCFDSDGDGKLSLEDFQKIVSRCNMLQRSET 304

[Close]
BLAST of Lsi09G016600 vs. NCBI nr
Match: gi|1009143725|ref|XP_015889410.1| (PREDICTED: uncharacterized protein LOC107424190 [Ziziphus jujuba])

HSP 1 Score: 152.5 bits (384), Expect = 8.9e-34
Identity = 82/155 (52.90%), Postives = 110/155 (70.97%), Query Frame = 1 

Query: 76  KNRGSEAKRKVSVKKS-NNFDDKDDDDALRQAIKLSLRDSGENSDA-QVQGPFENVRRKN 135
           K +G   K+K + +K  +N D  DDD+A+RQAI LSL+ S E S   + +    +  +  
Sbjct: 125 KKKGPTPKKKAAAQKHPSNSDYVDDDEAMRQAIALSLQTSAEASSVVRNRSSGRSEIKGK 184

Query: 136 VKNQEVRGGMKRKGLFTSQMQMNEDELIMNFYCFDESWKGGITVNDLKRVAAAHDFTWSD 195
            + QE +   KRK  F S++QM EDEL+++F+ FD+ WKGGI++ D++RVA AHDFTWSD
Sbjct: 185 TQIQEDKAMRKRKKSFASRLQMTEDELVLHFFQFDDEWKGGISIRDVERVANAHDFTWSD 244

Query: 196 IELRDMIDCFDSDGDGKLNLDDFRRIAGRCNMIKE 229
            EL DMI+CFDSDGD KL+LDDFR+IA RCNMIKE
Sbjct: 245 KELADMINCFDSDGDRKLSLDDFRKIATRCNMIKE 279

The following BLAST results are available for this feature:
BLAST of Lsi09G016600 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CETN1_BOVIN1.2e-0640.58Centrin-1 OS=Bos taurus GN=CETN1 PE=2 SV=1[more]
CATR_SPESI7.8e-0637.14Caltractin (Fragment) OS=Spermatozopsis similis PE=2 SV=1[more]
CETN1_MOUSE7.8e-0637.68Centrin-1 OS=Mus musculus GN=Cetn1 PE=1 SV=1[more]
BLAST of Lsi09G016600 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KDV1_CUCSA1.9e-7591.08Uncharacterized protein OS=Cucumis sativus GN=Csa_6G108450 PE=4 SV=1[more]
F6I3A6_VITVI9.5e-3551.19Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g00230 PE=4 SV=... [more]
M5X4Z3_PRUPE5.2e-3349.41Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026500mg PE=4 SV=1[more]
A0A0D2QP81_GOSRA6.8e-3351.79Uncharacterized protein OS=Gossypium raimondii GN=B456_007G089100 PE=4 SV=1[more]
W9QGY0_9ROSA6.8e-3354.19Uncharacterized protein OS=Morus notabilis GN=L484_020887 PE=4 SV=1[more]
BLAST of Lsi09G016600 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G73440.11.2e-2542.94 calmodulin-related[more]
AT4G00140.15.7e-0753.49 Calcium-binding EF-hand family protein[more]
BLAST of Lsi09G016600 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449445469|ref|XP_004140495.1|2.7e-7591.08PREDICTED: uncharacterized protein LOC101206207 [Cucumis sativus][more]
gi|659120420|ref|XP_008460184.1|2.3e-5875.80PREDICTED: uncharacterized protein LOC103499070 [Cucumis melo][more]
gi|296089207|emb|CBI38910.3|1.4e-3451.19unnamed protein product [Vitis vinifera][more]
gi|731421279|ref|XP_010661681.1|1.4e-3451.19PREDICTED: uncharacterized protein LOC100262506 [Vitis vinifera][more]
gi|1009143725|ref|XP_015889410.1|8.9e-3452.90PREDICTED: uncharacterized protein LOC107424190 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
Vocabulary: INTERPRO
TermDefinition
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
IPR003903UIM_dom
IPR002048EF_hand_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005509 calcium ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi09G016600.1Lsi09G016600.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainPFAMPF13833EF-hand_8coord: 172..217
score: 5.
IPR002048EF-hand domainSMARTSM00054efh_1coord: 195..223
score: 2.
IPR002048EF-hand domainPROFILEPS50222EF_HAND_2coord: 191..226
score: 1
IPR003903Ubiquitin interacting motifPROFILEPS50330UIMcoord: 98..117
score: 8
IPR011992EF-hand domain pairGENE3DG3DSA:1.10.238.10coord: 155..220
score: 7.9
IPR011992EF-hand domain pairunknownSSF47473EF-handcoord: 160..219
score: 1.8
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 204..216
scor

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi09G016600MELO3C022245Melon (DHL92) v3.5.1lsimeB018
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi09G016600Cucumber (Gy14) v1cgylsiB169
Lsi09G016600Cucumber (Gy14) v1cgylsiB171
Lsi09G016600Cucurbita maxima (Rimu)cmalsiB331
Lsi09G016600Cucurbita maxima (Rimu)cmalsiB336
Lsi09G016600Cucurbita moschata (Rifu)cmolsiB320
Lsi09G016600Cucurbita moschata (Rifu)cmolsiB326
Lsi09G016600Cucurbita pepo (Zucchini)cpelsiB101
Lsi09G016600Cucurbita pepo (Zucchini)cpelsiB105
Lsi09G016600Wild cucumber (PI 183967)cpilsiB401
Lsi09G016600Wild cucumber (PI 183967)cpilsiB404
Lsi09G016600Cucumber (Chinese Long) v2culsiB398
Lsi09G016600Cucumber (Chinese Long) v2culsiB402
Lsi09G016600Melon (DHL92) v3.5.1lsimeB017
Lsi09G016600Watermelon (Charleston Gray)lsiwcgB026
Lsi09G016600Watermelon (Charleston Gray)lsiwcgB029
Lsi09G016600Watermelon (97103) v1lsiwmB036
Lsi09G016600Watermelon (97103) v1lsiwmB042
Lsi09G016600Cucumber (Gy14) v2cgyblsiB364
Lsi09G016600Cucumber (Gy14) v2cgyblsiB366
Lsi09G016600Melon (DHL92) v3.6.1lsimedB019
Lsi09G016600Melon (DHL92) v3.6.1lsimedB020
Lsi09G016600Silver-seed gourdcarlsiB820
Lsi09G016600Silver-seed gourdcarlsiB821
Lsi09G016600Cucumber (Chinese Long) v3cuclsiB422
Lsi09G016600Cucumber (Chinese Long) v3cuclsiB424
Lsi09G016600Watermelon (97103) v2lsiwmbB024
Lsi09G016600Watermelon (97103) v2lsiwmbB026
Lsi09G016600Wax gourdlsiwgoB011
Lsi09G016600Wax gourdlsiwgoB034