Lsi09G016580 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi09G016580
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Defensin
Location	chr09 : 24999178 .. 24999858 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGCAAATACAAAATTGCATAAACAATTGAAACAATAGAAATGGGCAAGATTGTGGGTAGCTCTGCAAAGATGTTGGTTGCTTTGCTCTTCCTTTTGGTCCTCATGCTTTCCATGAATGGTAAATTAAAATTTTGAAGGGTAGAAACTACCTAGAAAGAAACTTATTTTGTGTAGACATCATTTTTGTTTTTGTTTTTTAATTCTGTGATCACTTGGTGTGGCCACAGAAAAGCGAGGAGTGGTGGAGGCAAAGGTGTGCGAGAAGCGGAGCAAGACGTGGTCGGGATGGTGTGGGGACACGAGCCATTGCGACCGGCAATGCAAGAATTGGGAAGGTGCCAAACATGGAGCTTGCCATGCTCAATTTCCTGGAAGGGCTTGTTTTTGCTACTTCAACTGTTGAAAACCATGCAATAATCTTATGATCAAGATAATCTCCTTATATATATATATATATATCATAATTCCCCTTTTTAAGAATAAAAATTTGAGTTACTTGTTGTGTGTGTCTTGTGTGAAAGGGATCATCTTTATGTAATATTAGTTTTTAATTAATGTTTTTATGTGGTTGGAAAATTGAGTGTATTGTGGTTAATATGCTGCTATTTATTTTTGGCAGCTTGTTTGTGTGTTTCTTCTTCTTCATATCTGAATATTGAATAAAATTACTTTTGATTATTA

mRNA sequence

TGCAAATACAAAATTGCATAAACAATTGAAACAATAGAAATGGGCAAGATTGTGGGTAGCTCTGCAAAGATGTTGGTTGCTTTGCTCTTCCTTTTGGTCCTCATGCTTTCCATGAATGAAAAGCGAGGAGTGGTGGAGGCAAAGGTGTGCGAGAAGCGGAGCAAGACGTGGTCGGGATGGTGTGGGGACACGAGCCATTGCGACCGGCAATGCAAGAATTGGGAAGGTGCCAAACATGGAGCTTGCCATGCTCAATTTCCTGGAAGGGCTTGTTTTTGCTACTTCAACTGTTGAAAACCATGCAATAATCTTATGATCAAGATAATCTCCTTATATATATATATATATATCATAATTCCCCTTTTTAAGAATAAAAATTTGAGTTACTTGTTGTGTGTGTCTTGTGTGAAAGGGATCATCTTTATGTAATATTAGTTTTTAATTAATGTTTTTATGTGGTTGGAAAATTGAGTGTATTGTGGTTAATATGCTGCTATTTATTTTTGGCAGCTTGTTTGTGTGTTTCTTCTTCTTCATATCTGAATATTGAATAAAATTACTTTTGATTATTA

Coding sequence (CDS)

ATGGGCAAGATTGTGGGTAGCTCTGCAAAGATGTTGGTTGCTTTGCTCTTCCTTTTGGTCCTCATGCTTTCCATGAATGAAAAGCGAGGAGTGGTGGAGGCAAAGGTGTGCGAGAAGCGGAGCAAGACGTGGTCGGGATGGTGTGGGGACACGAGCCATTGCGACCGGCAATGCAAGAATTGGGAAGGTGCCAAACATGGAGCTTGCCATGCTCAATTTCCTGGAAGGGCTTGTTTTTGCTACTTCAACTGTTGA

Protein sequence

MGKIVGSSAKMLVALLFLLVLMLSMNEKRGVVEAKVCEKRSKTWSGWCGDTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC

Homology

[Close]

BLAST of Lsi09G016580 vs. Swiss-Prot
Match: DEF19_ARATH (Defensin-like protein 19 OS=Arabidopsis thaliana GN=PDF1.4 PE=3 SV=2)

HSP 1 Score: 99.8 bits (247), Expect = 1.6e-20
Identity = 44/78 (56.41%), Postives = 57/78 (73.08%), Query Frame = 1


Query: 7  SSAKMLVALLFLLVLMLSMNEKRGVVEAKVCEKRSKTWSGWCGDTSHCDRQCKNWEGAKH 66
          +S+  L+  L L + +++  E   V E ++CE+RSKTW+G+CG+T  CD QCK WE A H
Sbjct: 2  ASSYTLMLFLCLSIFLIASTEMMAV-EGRICERRSKTWTGFCGNTRGCDSQCKRWERASH 61

Query: 67 GACHAQFPGRACFCYFNC 85
          GACHAQFPG ACFCYFNC
Sbjct: 62 GACHAQFPGFACFCYFNC 78

[Close]

BLAST of Lsi09G016580 vs. Swiss-Prot
Match: DEF1_DAHME (Defensin-like protein 1 OS=Dahlia merckii PE=1 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 1.4e-16
Identity = 34/50 (68.00%), Postives = 39/50 (78.00%), Query Frame = 1


Query: 35 KVCEKRSKTWSGWCGDTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC 85
          ++CEK SKTWSG CG+T HCD QCK+WEGA HGACH +     CFCYFNC
Sbjct: 1  ELCEKASKTWSGNCGNTGHCDNQCKSWEGAAHGACHVRNGKHMCFCYFNC 50

[Close]

BLAST of Lsi09G016580 vs. Swiss-Prot
Match: SF18_HELAN (Anther-specific protein SF18 (Fragment) OS=Helianthus annuus PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 1.7e-14
Identity = 32/53 (60.38%), Postives = 38/53 (71.70%), Query Frame = 1


Query: 32 VEAKVCEKRSKTWSGWCGDTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC 85
          V  K+CEK SKTW G C DT  CD++C +WEGAKHGACH +     CFCYF+C
Sbjct: 13 VNGKICEKPSKTWFGNCKDTDKCDKRCIDWEGAKHGACHQREAKHMCFCYFDC 65

[Close]

BLAST of Lsi09G016580 vs. Swiss-Prot
Match: DEF1_CLITE (Defensin-like protein 1 OS=Clitoria ternatea PE=1 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 6.3e-14
Identity = 31/49 (63.27%), Postives = 38/49 (77.55%), Query Frame = 1


Query: 36 VCEKRSKTWSGWCGDTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC 85
          +CE+ S TW+G CG+T HCD QC+NWE AKHGACH +   + CFCYFNC
Sbjct: 2  LCERASLTWTGNCGNTGHCDTQCRNWESAKHGACHKRGNWK-CFCYFNC 49

[Close]

BLAST of Lsi09G016580 vs. Swiss-Prot
Match: DEF3_RAPSA (Defensin-like protein 3 OS=Raphanus sativus GN=AFP3 PE=3 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 8.2e-14
Identity = 36/73 (49.32%), Postives = 48/73 (65.75%), Query Frame = 1


Query: 12 LVALLFLLVLMLSMNEKRGVVEAKVCEKRSKTWSGWCGDTSHCDRQCKNWEGAKHGACHA 71
          +VALLF  +++ +  E   VVEAK+CE+ S TWSG CG+ + C  QC   EGA+HG+C+ 
Sbjct: 7  IVALLFAALVVFAAFEAPTVVEAKLCERSSGTWSGVCGNNNACKNQCIRLEGAQHGSCNY 66

Query: 72 QFPGRACFCYFNC 85
           FP   C CYF C
Sbjct: 67 VFPAHKCICYFPC 79

[Close]

BLAST of Lsi09G016580 vs. TrEMBL
Match: A0A0A0LFX9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G851940 PE=3 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 2.6e-38
Identity = 74/84 (88.10%), Postives = 80/84 (95.24%), Query Frame = 1


Query: 1  MGKIVGSSAKMLVALLFLLVLMLSMNEKRGVVEAKVCEKRSKTWSGWCGDTSHCDRQCKN 60
          M K+VG+SAKM+VALLFLL LMLSMNEK+GVVEAKVCE+RSKTWSGWCG+T HCDRQCKN
Sbjct: 1  MAKVVGNSAKMIVALLFLLALMLSMNEKQGVVEAKVCERRSKTWSGWCGNTKHCDRQCKN 60

Query: 61 WEGAKHGACHAQFPGRACFCYFNC 85
          WEGA HGACHAQFPGRACFCYFNC
Sbjct: 61 WEGATHGACHAQFPGRACFCYFNC 84

[Close]

BLAST of Lsi09G016580 vs. TrEMBL
Match: A5AHS9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040160 PE=3 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 2.8e-21
Identity = 50/84 (59.52%), Postives = 65/84 (77.38%), Query Frame = 1


Query: 1  MGKIVGSSAKMLVALLFLLVLMLSMNEKRGVVEAKVCEKRSKTWSGWCGDTSHCDRQCKN 60
          M K++G    +  AL FL +  L ++ +  ++EAKVC++ SKTWSG+CG + +CDRQCKN
Sbjct: 1  MAKLLGYL--LSYALSFLTLFALLVSTEMVMLEAKVCQRPSKTWSGFCGSSKNCDRQCKN 60

Query: 61 WEGAKHGACHAQFPGRACFCYFNC 85
          WEGAKHGACHA+FPG ACFCYFNC
Sbjct: 61 WEGAKHGACHAKFPGVACFCYFNC 82

[Close]

BLAST of Lsi09G016580 vs. TrEMBL
Match: B9R7X8_RICCO (Low-molecular-weight cysteine-rich protein LCR78, putative OS=Ricinus communis GN=RCOM_1595110 PE=3 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 3.7e-21
Identity = 47/69 (68.12%), Postives = 56/69 (81.16%), Query Frame = 1


Query: 16 LFLLVLMLSMNEKRGVVEAKVCEKRSKTWSGWCGDTSHCDRQCKNWEGAKHGACHAQFPG 75
          LF+ + +L   E + V +AKVC++RSKTWSG+CG T +CDRQCKNWEGA HGACHAQFPG
Sbjct: 12 LFIFLFLLVSTEMQ-VTQAKVCQRRSKTWSGFCGSTKNCDRQCKNWEGALHGACHAQFPG 71

Query: 76 RACFCYFNC 85
           ACFCYF C
Sbjct: 72 VACFCYFKC 79

[Close]

BLAST of Lsi09G016580 vs. TrEMBL
Match: A0A022QXX9_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv11b019564mg PE=3 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 3.1e-20
Identity = 42/70 (60.00%), Postives = 59/70 (84.29%), Query Frame = 1


Query: 15 LLFLLVLMLSMNEKRGVVEAKVCEKRSKTWSGWCGDTSHCDRQCKNWEGAKHGACHAQFP 74
          +L +L+L + +N +  VVE+++CE+RSKTW+G+CG +++C+ QC+NWE A HGACHAQFP
Sbjct: 13 ILIVLLLFIMLNNEVMVVESRLCERRSKTWTGFCGSSNNCNNQCRNWERASHGACHAQFP 72

Query: 75 GRACFCYFNC 85
          G ACFCYFNC
Sbjct: 73 GFACFCYFNC 82

[Close]

BLAST of Lsi09G016580 vs. TrEMBL
Match: M5Y4P8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb024748mg PE=3 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.2e-19
Identity = 44/84 (52.38%), Postives = 61/84 (72.62%), Query Frame = 1


Query: 1  MGKIVGSSAKMLVALLFLLVLMLSMNEKRGVVEAKVCEKRSKTWSGWCGDTSHCDRQCKN 60
          M K++       +  LFL + + S + +  +VEA++C++RSKTWSG+CG+T +C+RQC+N
Sbjct: 1  MAKLLSHPLFYPILFLFLFIFLASTDAEVAMVEARICQRRSKTWSGFCGNTGNCNRQCRN 60

Query: 61 WEGAKHGACHAQFPGRACFCYFNC 85
          WEGA  GACHAQ PG ACFCYF C
Sbjct: 61 WEGALRGACHAQSPGFACFCYFRC 84

[Close]

BLAST of Lsi09G016580 vs. TAIR10
Match: AT1G19610.1 (AT1G19610.1 Arabidopsis defensin-like protein)

HSP 1 Score: 99.8 bits (247), Expect = 8.7e-22
Identity = 44/78 (56.41%), Postives = 57/78 (73.08%), Query Frame = 1


Query: 7  SSAKMLVALLFLLVLMLSMNEKRGVVEAKVCEKRSKTWSGWCGDTSHCDRQCKNWEGAKH 66
          +S+  L+  L L + +++  E   V E ++CE+RSKTW+G+CG+T  CD QCK WE A H
Sbjct: 2  ASSYTLMLFLCLSIFLIASTEMMAV-EGRICERRSKTWTGFCGNTRGCDSQCKRWERASH 61

Query: 67 GACHAQFPGRACFCYFNC 85
          GACHAQFPG ACFCYFNC
Sbjct: 62 GACHAQFPGFACFCYFNC 78

[Close]

BLAST of Lsi09G016580 vs. TAIR10
Match: AT2G26010.1 (AT2G26010.1 plant defensin 1.3)

HSP 1 Score: 72.8 bits (177), Expect = 1.1e-13
Identity = 35/74 (47.30%), Postives = 48/74 (64.86%), Query Frame = 1


Query: 12 LVALLFLLVLMLSMNEKRGVVEA-KVCEKRSKTWSGWCGDTSHCDRQCKNWEGAKHGACH 71
          ++  LF  +++ +  E   +VEA K+CEK S TWSG CG+++ C  QC N EGAKHG+C+
Sbjct: 7  IITFLFAALVLFAAFEAPIMVEAQKLCEKPSGTWSGVCGNSNACKNQCINLEGAKHGSCN 66

Query: 72 AQFPGRACFCYFNC 85
            FP   C CYF C
Sbjct: 67 YVFPAHKCICYFPC 80

[Close]

BLAST of Lsi09G016580 vs. TAIR10
Match: AT5G44420.1 (AT5G44420.1 plant defensin 1.2)

HSP 1 Score: 71.2 bits (173), Expect = 3.3e-13
Identity = 33/74 (44.59%), Postives = 48/74 (64.86%), Query Frame = 1


Query: 12 LVALLFLLVLMLSMNEKRGVVEA-KVCEKRSKTWSGWCGDTSHCDRQCKNWEGAKHGACH 71
          ++ L+F  +++ +  +   +VEA K+CEK S TWSG CG+++ C  QC N EGAKHG+C+
Sbjct: 7  IITLIFAALVLFAAFDAPAMVEAQKLCEKPSGTWSGVCGNSNACKNQCINLEGAKHGSCN 66

Query: 72 AQFPGRACFCYFNC 85
            FP   C CY  C
Sbjct: 67 YVFPAHKCICYVPC 80

[Close]

BLAST of Lsi09G016580 vs. TAIR10
Match: AT5G44430.1 (AT5G44430.1 plant defensin 1.2C)

HSP 1 Score: 70.9 bits (172), Expect = 4.3e-13
Identity = 34/74 (45.95%), Postives = 47/74 (63.51%), Query Frame = 1


Query: 12 LVALLFLLVLMLSMNEKRGVVEA-KVCEKRSKTWSGWCGDTSHCDRQCKNWEGAKHGACH 71
          ++  LF  +++ +  E   +VEA K+CEK S TWSG CG+++ C  QC N EGAKHG+C+
Sbjct: 7  IITFLFAALVLFAAFEAPTMVEAQKLCEKPSGTWSGVCGNSNACKNQCINLEGAKHGSCN 66

Query: 72 AQFPGRACFCYFNC 85
            FP   C CY  C
Sbjct: 67 YVFPAHKCICYVPC 80

[Close]

BLAST of Lsi09G016580 vs. TAIR10
Match: AT2G26020.1 (AT2G26020.1 plant defensin 1.2b)

HSP 1 Score: 68.6 bits (166), Expect = 2.2e-12
Identity = 32/74 (43.24%), Postives = 47/74 (63.51%), Query Frame = 1


Query: 12 LVALLFLLVLMLSMNEKRGVVEA-KVCEKRSKTWSGWCGDTSHCDRQCKNWEGAKHGACH 71
          ++  ++  +++ +  E   +VEA K+CEK S TWSG CG+++ C  QC N EGAKHG+C+
Sbjct: 7  IITFIYAALVLFAAFEVPTMVEAQKLCEKPSGTWSGVCGNSNACKNQCINLEGAKHGSCN 66

Query: 72 AQFPGRACFCYFNC 85
            FP   C CY  C
Sbjct: 67 YVFPAHKCICYVPC 80

[Close]

BLAST of Lsi09G016580 vs. NCBI nr
Match: gi|659109336|ref|XP_008454663.1| (PREDICTED: defensin-like protein 1 [Cucumis melo])

HSP 1 Score: 166.0 bits (419), Expect = 2.8e-38
Identity = 74/84 (88.10%), Postives = 79/84 (94.05%), Query Frame = 1


Query: 1  MGKIVGSSAKMLVALLFLLVLMLSMNEKRGVVEAKVCEKRSKTWSGWCGDTSHCDRQCKN 60
          M K+VG+SAKM+VA LFLL L LSMNEK+GVVEAKVCE+RSKTWSGWCGDT HCDRQCKN
Sbjct: 1  MAKVVGNSAKMIVAFLFLLALTLSMNEKQGVVEAKVCERRSKTWSGWCGDTKHCDRQCKN 60

Query: 61 WEGAKHGACHAQFPGRACFCYFNC 85
          WEGAKHGACHAQFPGRACFCYFNC
Sbjct: 61 WEGAKHGACHAQFPGRACFCYFNC 84

[Close]

BLAST of Lsi09G016580 vs. NCBI nr
Match: gi|449464786|ref|XP_004150110.1| (PREDICTED: defensin-like protein 1 [Cucumis sativus])

HSP 1 Score: 165.6 bits (418), Expect = 3.7e-38
Identity = 74/84 (88.10%), Postives = 80/84 (95.24%), Query Frame = 1


Query: 1  MGKIVGSSAKMLVALLFLLVLMLSMNEKRGVVEAKVCEKRSKTWSGWCGDTSHCDRQCKN 60
          M K+VG+SAKM+VALLFLL LMLSMNEK+GVVEAKVCE+RSKTWSGWCG+T HCDRQCKN
Sbjct: 1  MAKVVGNSAKMIVALLFLLALMLSMNEKQGVVEAKVCERRSKTWSGWCGNTKHCDRQCKN 60

Query: 61 WEGAKHGACHAQFPGRACFCYFNC 85
          WEGA HGACHAQFPGRACFCYFNC
Sbjct: 61 WEGATHGACHAQFPGRACFCYFNC 84

[Close]

BLAST of Lsi09G016580 vs. NCBI nr
Match: gi|802594437|ref|XP_012071904.1| (PREDICTED: defensin-like protein 19 [Jatropha curcas])

HSP 1 Score: 110.5 bits (275), Expect = 1.4e-21
Identity = 50/84 (59.52%), Postives = 62/84 (73.81%), Query Frame = 1


Query: 1  MGKIVGSSAKMLVALLFLLVLMLSMNEKRGVVEAKVCEKRSKTWSGWCGDTSHCDRQCKN 60
          M K+  S+   L+  LFLLV     +++  V EAK+C++RSKTWSG+CGD   C+RQC+N
Sbjct: 1  MAKLHSSALCFLIIFLFLLV-----SKEMAVTEAKLCQRRSKTWSGFCGDPGKCNRQCRN 60

Query: 61 WEGAKHGACHAQFPGRACFCYFNC 85
          WEGA HGACHAQFPG ACFCYF C
Sbjct: 61 WEGASHGACHAQFPGFACFCYFKC 79

[Close]

BLAST of Lsi09G016580 vs. NCBI nr
Match: gi|147772111|emb|CAN64556.1| (hypothetical protein VITISV_040160 [Vitis vinifera])

HSP 1 Score: 109.0 bits (271), Expect = 4.1e-21
Identity = 50/84 (59.52%), Postives = 65/84 (77.38%), Query Frame = 1


Query: 1  MGKIVGSSAKMLVALLFLLVLMLSMNEKRGVVEAKVCEKRSKTWSGWCGDTSHCDRQCKN 60
          M K++G    +  AL FL +  L ++ +  ++EAKVC++ SKTWSG+CG + +CDRQCKN
Sbjct: 1  MAKLLGYL--LSYALSFLTLFALLVSTEMVMLEAKVCQRPSKTWSGFCGSSKNCDRQCKN 60

Query: 61 WEGAKHGACHAQFPGRACFCYFNC 85
          WEGAKHGACHA+FPG ACFCYFNC
Sbjct: 61 WEGAKHGACHAKFPGVACFCYFNC 82

[Close]

BLAST of Lsi09G016580 vs. NCBI nr
Match: gi|255538712|ref|XP_002510421.1| (PREDICTED: defensin-like protein 19 [Ricinus communis])

HSP 1 Score: 108.6 bits (270), Expect = 5.3e-21
Identity = 47/69 (68.12%), Postives = 56/69 (81.16%), Query Frame = 1


Query: 16 LFLLVLMLSMNEKRGVVEAKVCEKRSKTWSGWCGDTSHCDRQCKNWEGAKHGACHAQFPG 75
          LF+ + +L   E + V +AKVC++RSKTWSG+CG T +CDRQCKNWEGA HGACHAQFPG
Sbjct: 12 LFIFLFLLVSTEMQ-VTQAKVCQRRSKTWSGFCGSTKNCDRQCKNWEGALHGACHAQFPG 71

Query: 76 RACFCYFNC 85
           ACFCYF C
Sbjct: 72 VACFCYFKC 79

The following BLAST results are available for this feature:

BLAST of Lsi09G016580 vs. Swiss-Prot


Match Name	E-value	Identity	Description
DEF19_ARATH	1.6e-20	56.41	Defensin-like protein 19 OS=Arabidopsis thaliana GN=PDF1.4 PE=3 SV=2	[more]
DEF1_DAHME	1.4e-16	68.00	Defensin-like protein 1 OS=Dahlia merckii PE=1 SV=1	[more]
SF18_HELAN	1.7e-14	60.38	Anther-specific protein SF18 (Fragment) OS=Helianthus annuus PE=2 SV=1	[more]
DEF1_CLITE	6.3e-14	63.27	Defensin-like protein 1 OS=Clitoria ternatea PE=1 SV=1	[more]
DEF3_RAPSA	8.2e-14	49.32	Defensin-like protein 3 OS=Raphanus sativus GN=AFP3 PE=3 SV=1	[more]

BLAST of Lsi09G016580 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LFX9_CUCSA	2.6e-38	88.10	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G851940 PE=3 SV=1	[more]
A5AHS9_VITVI	2.8e-21	59.52	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040160 PE=3 SV=1	[more]
B9R7X8_RICCO	3.7e-21	68.12	Low-molecular-weight cysteine-rich protein LCR78, putative OS=Ricinus communis G...	[more]
A0A022QXX9_ERYGU	3.1e-20	60.00	Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv11b019564mg PE=3 SV=1	[more]
M5Y4P8_PRUPE	1.2e-19	52.38	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb024748mg PE=3 SV=1	[more]

BLAST of Lsi09G016580 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G19610.1	8.7e-22	56.41	Arabidopsis defensin-like protein	[more]
AT2G26010.1	1.1e-13	47.30	plant defensin 1.3	[more]
AT5G44420.1	3.3e-13	44.59	plant defensin 1.2	[more]
AT5G44430.1	4.3e-13	45.95	plant defensin 1.2C	[more]
AT2G26020.1	2.2e-12	43.24	plant defensin 1.2b	[more]

BLAST of Lsi09G016580 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659109336\|ref\|XP_008454663.1\|	2.8e-38	88.10	PREDICTED: defensin-like protein 1 [Cucumis melo]	[more]
gi\|449464786\|ref\|XP_004150110.1\|	3.7e-38	88.10	PREDICTED: defensin-like protein 1 [Cucumis sativus]	[more]
gi\|802594437\|ref\|XP_012071904.1\|	1.4e-21	59.52	PREDICTED: defensin-like protein 19 [Jatropha curcas]	[more]
gi\|147772111\|emb\|CAN64556.1\|	4.1e-21	59.52	hypothetical protein VITISV_040160 [Vitis vinifera]	[more]
gi\|255538712\|ref\|XP_002510421.1\|	5.3e-21	68.12	PREDICTED: defensin-like protein 19 [Ricinus communis]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050832	defense response to fungus
biological_process	GO:0031640	killing of cells of other organism
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G016580.1	Lsi09G016580.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi09G016580	Melon (DHL92) v3.6.1	lsimedB019
Lsi09G016580	Melon (DHL92) v3.6.1	lsimedB020
Lsi09G016580	Silver-seed gourd	carlsiB820
Lsi09G016580	Silver-seed gourd	carlsiB821
Lsi09G016580	Cucumber (Chinese Long) v3	cuclsiB422
Lsi09G016580	Cucumber (Chinese Long) v3	cuclsiB424
Lsi09G016580	Watermelon (97103) v2	lsiwmbB024
Lsi09G016580	Watermelon (97103) v2	lsiwmbB026
Lsi09G016580	Wax gourd	lsiwgoB011
Lsi09G016580	Wax gourd	lsiwgoB034
Lsi09G016580	Cucumber (Gy14) v1	cgylsiB169
Lsi09G016580	Cucumber (Gy14) v1	cgylsiB171
Lsi09G016580	Cucurbita maxima (Rimu)	cmalsiB331
Lsi09G016580	Cucurbita maxima (Rimu)	cmalsiB336
Lsi09G016580	Cucurbita moschata (Rifu)	cmolsiB320
Lsi09G016580	Cucurbita moschata (Rifu)	cmolsiB326
Lsi09G016580	Cucurbita pepo (Zucchini)	cpelsiB101
Lsi09G016580	Cucurbita pepo (Zucchini)	cpelsiB105
Lsi09G016580	Wild cucumber (PI 183967)	cpilsiB401
Lsi09G016580	Wild cucumber (PI 183967)	cpilsiB404
Lsi09G016580	Cucumber (Chinese Long) v2	culsiB398
Lsi09G016580	Cucumber (Chinese Long) v2	culsiB402
Lsi09G016580	Melon (DHL92) v3.5.1	lsimeB017
Lsi09G016580	Melon (DHL92) v3.5.1	lsimeB018
Lsi09G016580	Watermelon (Charleston Gray)	lsiwcgB026
Lsi09G016580	Watermelon (Charleston Gray)	lsiwcgB029
Lsi09G016580	Watermelon (97103) v1	lsiwmB036
Lsi09G016580	Watermelon (97103) v1	lsiwmB042
Lsi09G016580	Cucumber (Gy14) v2	cgyblsiB364
Lsi09G016580	Cucumber (Gy14) v2	cgyblsiB366