Lsi09G014230 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi09G014230
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr09 : 22228950 .. 22229504 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTCCTCAACGACGTCGTTAAAGGAAAATGAAAAACCGACCGCCGCTGACCCCACCCGAGGAATTGGATATCCACCGGAAGTATATCCTCCACCACCACACTACGGCGGCGGATACCGACCAGCAGGATATGCTCCGCCACTGCCAATGCCCGGATACGGTGGACATCCGTCGCCACCACCACCCTACGGCGCGTTTCCACAGCCGTACAACACTGGGCCCTACACTCCACCTCCACAAGCCTACGGTTATCCACATCATCCTCCGCCGGCGCCGGCTTATGGTTATGCTCCGCCGCCAGGATATCTGCCGGCGGCGAACGCTCCAACGAAGAAAAAGAAGAAGACAGGGATGAGTAAAATTCTTGGAATGGGAGCGGGGTTGGTCGGCGGAGTTGTCGGAGGGCTTTTGCTCGGCGAATTGGCGGCGGATGGTGGGGCGGCGCCGCCGTCGTTTGAGTTATTTTCCAATCCCACAGGCGGCGGAATGGATTATAATGCAAGCATGCAATCATGCAATGATAGTATGAATACGCTCGGTACCATTGGGTGA

mRNA sequence

ATGGAGTCCTCAACGACGTCGTTAAAGGAAAATGAAAAACCGACCGCCGCTGACCCCACCCGAGGAATTGGATATCCACCGGAAGTATATCCTCCACCACCACACTACGGCGGCGGATACCGACCAGCAGGATATGCTCCGCCACTGCCAATGCCCGGATACGGTGGACATCCGTCGCCACCACCACCCTACGGCGCGTTTCCACAGCCGTACAACACTGGGCCCTACACTCCACCTCCACAAGCCTACGGTTATCCACATCATCCTCCGCCGGCGCCGGCTTATGGTTATGCTCCGCCGCCAGGATATCTGCCGGCGGCGAACGCTCCAACGAAGAAAAAGAAGAAGACAGGGATGAGTAAAATTCTTGGAATGGGAGCGGGGTTGGTCGGCGGAGTTGTCGGAGGGCTTTTGCTCGGCGAATTGGCGGCGGATGGTGGGGCGGCGCCGCCGTCGTTTGAGTTATTTTCCAATCCCACAGGCGGCGGAATGGATTATAATGCAAGCATGCAATCATGCAATGATAGTATGAATACGCTCGGTACCATTGGGTGA

Coding sequence (CDS)

ATGGAGTCCTCAACGACGTCGTTAAAGGAAAATGAAAAACCGACCGCCGCTGACCCCACCCGAGGAATTGGATATCCACCGGAAGTATATCCTCCACCACCACACTACGGCGGCGGATACCGACCAGCAGGATATGCTCCGCCACTGCCAATGCCCGGATACGGTGGACATCCGTCGCCACCACCACCCTACGGCGCGTTTCCACAGCCGTACAACACTGGGCCCTACACTCCACCTCCACAAGCCTACGGTTATCCACATCATCCTCCGCCGGCGCCGGCTTATGGTTATGCTCCGCCGCCAGGATATCTGCCGGCGGCGAACGCTCCAACGAAGAAAAAGAAGAAGACAGGGATGAGTAAAATTCTTGGAATGGGAGCGGGGTTGGTCGGCGGAGTTGTCGGAGGGCTTTTGCTCGGCGAATTGGCGGCGGATGGTGGGGCGGCGCCGCCGTCGTTTGAGTTATTTTCCAATCCCACAGGCGGCGGAATGGATTATAATGCAAGCATGCAATCATGCAATGATAGTATGAATACGCTCGGTACCATTGGGTGA

Protein sequence

MESSTTSLKENEKPTAADPTRGIGYPPEVYPPPPHYGGGYRPAGYAPPLPMPGYGGHPSPPPPYGAFPQPYNTGPYTPPPQAYGYPHHPPPAPAYGYAPPPGYLPAANAPTKKKKKTGMSKILGMGAGLVGGVVGGLLLGELAADGGAAPPSFELFSNPTGGGMDYNASMQSCNDSMNTLGTIG
BLAST of Lsi09G014230 vs. TrEMBL
Match: B9HSC2_POPTR (Shock protein SRC2 OS=Populus trichocarpa GN=POPTR_0010s02500g PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 3.4e-11
Identity = 65/150 (43.33%), Postives = 78/150 (52.00%), Query Frame = 1

Query: 3   SSTTSLKENEKPTAADPTRGIGYP---PEVYPPPPHYGGGYRPAGYAPPLPMPGYGGHPS 62
           S+  +   N +P AA P      P   P  YPPP        PAGY  P P PGY G+P 
Sbjct: 153 SAAKATNSNSQPVAAYPAGPTSVPYGGPGSYPPP--------PAGYGYPPPPPGY-GYP- 212

Query: 63  PPPPYGAFPQPYNTGPYTPPPQAYGYPHHPPPAPAYGYAPPPGYL----PAANAPTKKKK 122
           PPPPYG +P         PPPQ YGY   PPP P YGY P  G      P      +KK 
Sbjct: 213 PPPPYGGYP--------PPPPQGYGY---PPPPPGYGYPPVQGGYGYPPPVQGQQPQKKN 272

Query: 123 KTGMSKILGMGAGLVGGVVGGLLLGELAAD 146
           K GM    G+GAGL+GG +GGLL+G++ +D
Sbjct: 273 KFGM----GLGAGLLGGAIGGLLIGDMVSD 277

BLAST of Lsi09G014230 vs. TrEMBL
Match: Q1EPG0_MUSAC (C2 domain-containing protein / XYPPX domain-containing protein OS=Musa acuminata GN=MA4_106O17.64 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 8.4e-10
Identity = 59/151 (39.07%), Postives = 72/151 (47.68%), Query Frame = 1

Query: 13  KPTAADPTRGIGYP-PEVYPPPPHYGGGYRPAGYAPPLPMPGYGGHPSPPPPYGAFPQPY 72
           +P  A P  G   P P  YPPPP YG    PAGY          G+P PP  YG      
Sbjct: 287 EPATAYPPPGPSEPYPHAYPPPPQYGYAAPPAGY----------GYPPPPQQYG------ 346

Query: 73  NTGPYTPPPQAYGYPHHPPPAPAYGYAPPPGYLPAANAPTKKKKKTGMSKILGMGAGLVG 132
               Y PPP  YGYP   PP   YGY        AA  P K K   GM    G+GAGL+G
Sbjct: 347 ----YAPPPSGYGYP---PPQAGYGYG-------AAQPPKKNKFGGGMGA--GLGAGLLG 405

Query: 133 GVVGGLLLGELAADGGAAPPSFELFSNPTGG 163
           G +GGLL+G++ +D G+    ++   +  GG
Sbjct: 407 GAIGGLLIGDMVSDAGSYDAGYDAGFDDAGG 405

BLAST of Lsi09G014230 vs. TrEMBL
Match: A0A059B4S2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H03902 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.4e-09
Identity = 67/141 (47.52%), Postives = 76/141 (53.90%), Query Frame = 1

Query: 14  PTAADPTRGIGYPPEVYPPPPHYGGGYRPAGYAPPLPMPGYGGHPSPPPPYGAFPQPYNT 73
           P  A P+   G   EVYPPPP   GGY      PP P PGY     PPPP   +P P   
Sbjct: 167 PVKAGPSGSYG---EVYPPPP--AGGY------PPPPPPGYA---YPPPPPAGYPPP--- 226

Query: 74  GPYTPPPQ--AYGYPHHPPPAPAYGYAPPP----GYLPAANAP-TKKKKKTGMSKILGMG 133
               PPPQ  AYGYP  PPP   YGYA PP    GY P   A    KK K G    LG+G
Sbjct: 227 ----PPPQYGAYGYP--PPPPAGYGYAQPPPPGYGYYPNQQAQQAPKKNKFG----LGLG 280

Query: 134 AGLVGGVVGGLLLGELAADGG 148
           AGL GG++GGLL+G++ +D G
Sbjct: 287 AGLAGGLLGGLLIGDMVSDAG 280

BLAST of Lsi09G014230 vs. TrEMBL
Match: A0A0D2NYW5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G263800 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 5.5e-09
Identity = 62/145 (42.76%), Postives = 73/145 (50.34%), Query Frame = 1

Query: 27  PEVYPPPPHYGGGYRPAGYAPPLP--MPGYGGHPS---PPPPYGAFPQPYNTGPYTPPPQ 86
           P  YPPPP  G GY   GY PP P  + GYGG+P    PPP YG          Y PPP 
Sbjct: 178 PGAYPPPPQ-GAGY---GYPPPPPHAVAGYGGYPPQGPPPPGYG----------YPPPPP 237

Query: 87  AYGYPHHPPPAPAYGYAPPPGYLPAANAPTKKKKKTGMSKILGMGAGLVGGVVGGLLLGE 146
            Y YP  PPP  AYGY P          P KK  K G    LG+GAGLVGG +GG+L+G+
Sbjct: 238 GYAYP--PPPPGAYGYPP-------VQQPPKKNSKFG----LGLGAGLVGGAIGGMLIGD 288

Query: 147 LAADGGAAPPSFELFSNPTGGGMDY 167
           + +D       F+       GG D+
Sbjct: 298 MVSDAADYDGGFD-------GGFDF 288

BLAST of Lsi09G014230 vs. TrEMBL
Match: A0A068VIN7_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00001816001 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.2e-08
Identity = 67/177 (37.85%), Postives = 84/177 (47.46%), Query Frame = 1

Query: 7   SLKENEKPTAADP----TRGIGYPPEVYPPPPHYGGGYRP------AGYAPP---LPMPG 66
           ++K +  P  A P    T     PP  YPPP      Y P      +GYAPP    P P 
Sbjct: 177 TVKADHAPVTAYPAPVGTSSPYPPPSYYPPPAAAAQPYPPPKEGASSGYAPPPTGYPAPA 236

Query: 67  YGGHPSPPPPYGAF----PQPYNTGPYTPPPQAYGYPHHPPPAPAYGYAPPPGYLPAANA 126
             G+P PPP    +    PQPY   P  PP   YGYP   PP   YGYAPP         
Sbjct: 237 AAGYPPPPPAGYGYGYPPPQPYGGYPPQPPSAGYGYP---PPQAGYGYAPP------VQQ 296

Query: 127 PTKKKKKTGMSKILGMGAGLVGGVVGGLLLGELAADGGAAPPSFELFSNPTGGGMDY 167
           P KK  K GM    G+GAGL+GG +GGLL+G+  +D  A    ++  +  + GG D+
Sbjct: 297 PPKKNNKFGM----GLGAGLLGGALGGLLIGDAISDASAYDAGYD--AGFSDGGFDF 338

BLAST of Lsi09G014230 vs. NCBI nr
Match: gi|720043150|ref|XP_010269468.1| (PREDICTED: abl interactor homolog [Nelumbo nucifera])

HSP 1 Score: 77.0 bits (188), Expect = 3.8e-11
Identity = 69/171 (40.35%), Postives = 82/171 (47.95%), Query Frame = 1

Query: 7   SLKENEKPTAADPTRGIGYPPEVYP-------PPPHYGGGYRPAGYAPPLPMPGYGGHPS 66
           S K  EK TA         P   YP       PPP   GGY P G A             
Sbjct: 131 SYKFGEKVTAPVTALKAEEPVTAYPAGTSAPYPPPGPSGGYAPHGVAS-----------Y 190

Query: 67  PPPPYGAFPQPYNTGPYTPPPQAYGYPH---HPPPAPAYGYAPPPGY-LPAANAPTKKKK 126
           PPPP G +P P   G Y PP   YGYP    +PPPAP YGY P PGY  P    P KKK 
Sbjct: 191 PPPPAGPYPPP---GGYPPPVPGYGYPPPGGYPPPAPGYGYPPAPGYGYPPVQQPPKKKN 250

Query: 127 KTGMSKILGMGAGLVGGVVGGLLLGELAADGGAAPPSFELFSNPTGGGMDY 167
           K GM    G+GAGL+GG +GGLL+G++ +D  +    ++       GG D+
Sbjct: 251 KFGM----GLGAGLLGGALGGLLIGDMVSDAASYDAGYD-----DAGGFDF 278

BLAST of Lsi09G014230 vs. NCBI nr
Match: gi|224110568|ref|XP_002315561.1| (shock protein SRC2 [Populus trichocarpa])

HSP 1 Score: 76.6 bits (187), Expect = 4.9e-11
Identity = 65/150 (43.33%), Postives = 78/150 (52.00%), Query Frame = 1

Query: 3   SSTTSLKENEKPTAADPTRGIGYP---PEVYPPPPHYGGGYRPAGYAPPLPMPGYGGHPS 62
           S+  +   N +P AA P      P   P  YPPP        PAGY  P P PGY G+P 
Sbjct: 153 SAAKATNSNSQPVAAYPAGPTSVPYGGPGSYPPP--------PAGYGYPPPPPGY-GYP- 212

Query: 63  PPPPYGAFPQPYNTGPYTPPPQAYGYPHHPPPAPAYGYAPPPGYL----PAANAPTKKKK 122
           PPPPYG +P         PPPQ YGY   PPP P YGY P  G      P      +KK 
Sbjct: 213 PPPPYGGYP--------PPPPQGYGY---PPPPPGYGYPPVQGGYGYPPPVQGQQPQKKN 272

Query: 123 KTGMSKILGMGAGLVGGVVGGLLLGELAAD 146
           K GM    G+GAGL+GG +GGLL+G++ +D
Sbjct: 273 KFGM----GLGAGLLGGAIGGLLIGDMVSD 277

BLAST of Lsi09G014230 vs. NCBI nr
Match: gi|658035404|ref|XP_008353231.1| (PREDICTED: protein diaphanous homolog 1-like [Malus domestica])

HSP 1 Score: 75.1 bits (183), Expect = 1.4e-10
Identity = 67/155 (43.23%), Postives = 82/155 (52.90%), Query Frame = 1

Query: 3   SSTTSLKENEKPTAADPTRGIGYPPEV----YPPPPHYGGGYRPAGYAPPLPMPGYGGHP 62
           ++T +  +  +P  A P  G    P V    Y PP     G  P+GY    P PGYG +P
Sbjct: 150 AATAAPSKGNEPVTAYPAVGPSVQPMVGYGGYTPPVGTSAGPPPSGYEYQPPPPGYG-YP 209

Query: 63  SPPPPYGAFPQPYNTGPYTPPPQAYGYPHHPPPAPAYGYA--PPPGY-LPAANAP---TK 122
            PPP YG          Y PPPQ YGYP   PP P YGY   PPPGY  PA        K
Sbjct: 210 PPPPGYG----------YPPPPQGYGYP---PPPPGYGYPGPPPPGYGYPAVQQXQPEAK 269

Query: 123 KKKKTGMSKILGMGAGLVGGVVGGLLLGELAADGG 148
           KK K GM    G+GAGL+GG++GGLL+G++ + GG
Sbjct: 270 KKNKFGM----GLGAGLLGGMLGGLLIGDMVSGGG 286

BLAST of Lsi09G014230 vs. NCBI nr
Match: gi|695024097|ref|XP_009399250.1| (PREDICTED: MAPK-interacting and spindle-stabilizing protein-like [Musa acuminata subsp. malaccensis])

HSP 1 Score: 72.0 bits (175), Expect = 1.2e-09
Identity = 59/151 (39.07%), Postives = 72/151 (47.68%), Query Frame = 1

Query: 13  KPTAADPTRGIGYP-PEVYPPPPHYGGGYRPAGYAPPLPMPGYGGHPSPPPPYGAFPQPY 72
           +P  A P  G   P P  YPPPP YG    PAGY          G+P PP  YG      
Sbjct: 227 EPATAYPPPGPSEPYPHAYPPPPQYGYAAPPAGY----------GYPPPPQQYG------ 286

Query: 73  NTGPYTPPPQAYGYPHHPPPAPAYGYAPPPGYLPAANAPTKKKKKTGMSKILGMGAGLVG 132
               Y PPP  YGYP   PP   YGY        AA  P K K   GM    G+GAGL+G
Sbjct: 287 ----YAPPPSGYGYP---PPQAGYGYG-------AAQPPKKNKFGGGMGA--GLGAGLLG 345

Query: 133 GVVGGLLLGELAADGGAAPPSFELFSNPTGG 163
           G +GGLL+G++ +D G+    ++   +  GG
Sbjct: 347 GAIGGLLIGDMVSDAGSYDAGYDAGFDDAGG 345

BLAST of Lsi09G014230 vs. NCBI nr
Match: gi|102139812|gb|ABF69997.1| (C2 domain-containing protein / XYPPX domain-containing protein [Musa acuminata])

HSP 1 Score: 72.0 bits (175), Expect = 1.2e-09
Identity = 59/151 (39.07%), Postives = 72/151 (47.68%), Query Frame = 1

Query: 13  KPTAADPTRGIGYP-PEVYPPPPHYGGGYRPAGYAPPLPMPGYGGHPSPPPPYGAFPQPY 72
           +P  A P  G   P P  YPPPP YG    PAGY          G+P PP  YG      
Sbjct: 287 EPATAYPPPGPSEPYPHAYPPPPQYGYAAPPAGY----------GYPPPPQQYG------ 346

Query: 73  NTGPYTPPPQAYGYPHHPPPAPAYGYAPPPGYLPAANAPTKKKKKTGMSKILGMGAGLVG 132
               Y PPP  YGYP   PP   YGY        AA  P K K   GM    G+GAGL+G
Sbjct: 347 ----YAPPPSGYGYP---PPQAGYGYG-------AAQPPKKNKFGGGMGA--GLGAGLLG 405

Query: 133 GVVGGLLLGELAADGGAAPPSFELFSNPTGG 163
           G +GGLL+G++ +D G+    ++   +  GG
Sbjct: 407 GAIGGLLIGDMVSDAGSYDAGYDAGFDDAGG 405

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
B9HSC2_POPTR3.4e-1143.33Shock protein SRC2 OS=Populus trichocarpa GN=POPTR_0010s02500g PE=4 SV=1[more]
Q1EPG0_MUSAC8.4e-1039.07C2 domain-containing protein / XYPPX domain-containing protein OS=Musa acuminata... [more]
A0A059B4S2_EUCGR1.4e-0947.52Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H03902 PE=4 SV=1[more]
A0A0D2NYW5_GOSRA5.5e-0942.76Uncharacterized protein OS=Gossypium raimondii GN=B456_006G263800 PE=4 SV=1[more]
A0A068VIN7_COFCA1.2e-0837.85Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00001816001 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|720043150|ref|XP_010269468.1|3.8e-1140.35PREDICTED: abl interactor homolog [Nelumbo nucifera][more]
gi|224110568|ref|XP_002315561.1|4.9e-1143.33shock protein SRC2 [Populus trichocarpa][more]
gi|658035404|ref|XP_008353231.1|1.4e-1043.23PREDICTED: protein diaphanous homolog 1-like [Malus domestica][more]
gi|695024097|ref|XP_009399250.1|1.2e-0939.07PREDICTED: MAPK-interacting and spindle-stabilizing protein-like [Musa acuminata... [more]
gi|102139812|gb|ABF69997.1|1.2e-0939.07C2 domain-containing protein / XYPPX domain-containing protein [Musa acuminata][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi09G014230.1Lsi09G014230.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi09G014230Cla009309Watermelon (97103) v1lsiwmB040
Lsi09G014230ClCG06G005180Watermelon (Charleston Gray)lsiwcgB029
Lsi09G014230Cla97C06G114680Watermelon (97103) v2lsiwmbB026
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi09G014230Cucurbita maxima (Rimu)cmalsiB811
Lsi09G014230Cucurbita moschata (Rifu)cmolsiB213
Lsi09G014230Cucurbita moschata (Rifu)cmolsiB320
Lsi09G014230Cucurbita moschata (Rifu)cmolsiB328
Lsi09G014230Cucurbita moschata (Rifu)cmolsiB733
Lsi09G014230Cucurbita moschata (Rifu)cmolsiB797
Lsi09G014230Cucurbita pepo (Zucchini)cpelsiB101
Lsi09G014230Cucurbita pepo (Zucchini)cpelsiB247
Lsi09G014230Cucurbita pepo (Zucchini)cpelsiB484
Lsi09G014230Cucurbita pepo (Zucchini)cpelsiB697
Lsi09G014230Wild cucumber (PI 183967)cpilsiB149
Lsi09G014230Wild cucumber (PI 183967)cpilsiB406
Lsi09G014230Cucumber (Chinese Long) v2culsiB150
Lsi09G014230Cucumber (Chinese Long) v2culsiB401
Lsi09G014230Cucumber (Chinese Long) v2culsiB404
Lsi09G014230Melon (DHL92) v3.5.1lsimeB017
Lsi09G014230Melon (DHL92) v3.5.1lsimeB029
Lsi09G014230Watermelon (Charleston Gray)lsiwcgB017
Lsi09G014230Watermelon (97103) v1lsiwmB017
Lsi09G014230Cucumber (Gy14) v2cgyblsiB136
Lsi09G014230Cucumber (Gy14) v2cgyblsiB368
Lsi09G014230Melon (DHL92) v3.6.1lsimedB019
Lsi09G014230Melon (DHL92) v3.6.1lsimedB032
Lsi09G014230Silver-seed gourdcarlsiB061
Lsi09G014230Silver-seed gourdcarlsiB550
Lsi09G014230Silver-seed gourdcarlsiB641
Lsi09G014230Silver-seed gourdcarlsiB760
Lsi09G014230Cucumber (Chinese Long) v3cuclsiB163
Lsi09G014230Cucumber (Chinese Long) v3cuclsiB265
Lsi09G014230Cucumber (Chinese Long) v3cuclsiB426
Lsi09G014230Watermelon (97103) v2lsiwmbB015
Lsi09G014230Watermelon (97103) v2lsiwmbB032
Lsi09G014230Wax gourdlsiwgoB025
Lsi09G014230Wax gourdlsiwgoB041
Lsi09G014230Bottle gourd (USVL1VR-Ls)lsilsiB006
Lsi09G014230Cucumber (Gy14) v1cgylsiB285
Lsi09G014230Cucumber (Gy14) v1cgylsiB412
Lsi09G014230Cucurbita maxima (Rimu)cmalsiB225
Lsi09G014230Cucurbita maxima (Rimu)cmalsiB331
Lsi09G014230Cucurbita maxima (Rimu)cmalsiB339
Lsi09G014230Cucurbita maxima (Rimu)cmalsiB741