Lsi09G011900 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi09G011900
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Coffea canephora DH200=94 genomic scaffold, scaffold_3
Location	chr09 : 19146833 .. 19150990 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAATGTTTAATCAAATTAATTATAATTAATACATTATTTAATATATAAGAAGAACCAAAGCTGAAGAGAAGAAGAGGGAGCAGCAGCTGAATTGAGTTGAAGAATTTCCCTTGAAACACAAATACGTGTTCTTGACTTCAAATTTCAGAGAGGAGTGTTTATACGAATCTCCTCCCATTTTCCCCAATTACCCACAAACTGATTTCCTTCATTTCTCAAAATCATCGCCATCATCAGCTACGGAATTCTGTGGGGTTGCTTCTAATTTCTTCGGCTTCGTTGTAAACAGCTGAATGGTATTTGGGAAATTGAAGGGAATATCGATTGAGAGTATCTGTAGAAGAAGAAAATGGAGGTTCAGCAGTCATGGAGATTGAGATTCTCGTTTAGGAATGCGACCATTGCTTTGTGCTTGTTGAATTTAGTGGCAGCTTTTCTTCTGCTTCAGGGTTTTTTATCTGCTGCTTCTTCCCGCAACAGACCCTCATCAACAAATCCCAATTTGGGTTTGTCTTCTCTCCTTCTCTTTACTTTTCCCAGTTTCTTTTGTAAATTCCTTGTTAAGTAATCGAAATATTTGTTGGGGGTTTATTGGAATTAGGTGGGATTTTCCTTAGCTTTGAGTTTTGATTCCATGAATTGATAAAGTGATTGTTTGAACTGCATATTGCTTGTTAGAGATTGATTAGTTGAGGATTAAGGAGTCAGATATGTACCACCAGGAAACAAGAAATTGCATCTTTGAGGACTTAAAATGGTAATCCTTGCACTCAGTTAGCCAAAATCTAAGAATGATGACAGTTGTGGAATTGAACATAAAGATAATGAAACTGGTCTCCTTCCAAGTTCCCAATATTTTCATTCCACTGTTGTGATCAAATGACTTTGACCTCTCCTAGCTGTCATTGTAAAAATCGCCAAAGATCTATATTTGAGATGGATCGGATATCTCATTATTGCAATTTTGAATATCCTGGAAAGTCCTGACTCTATCAAAGAAGCACCTGAAATTTTCTGTTGGTAATGGCAACTGTTGTTTTGATTATCATCAGTCCAGAATTGGTGTCTAAGACTTGTTTTTCTTCTTGGAACAAGAAACAACTTTCGTTGATAATAAGAAAAGAAAATGTTTAGCAAACAAACTCCCAAGGGAGTGAGATGAAAAAGAAAAACCTTGGTGACTAAGACTTGTTGGCAACCTCTGTTATTTGCATGTTTGGCTTTCCTGAAAATTCCGACTGTGTCAAGTGAGTGGCATTTGTTCCTGGGATTTTCTGTTCTTAAATCTTGTATTGTTGGATTAATTTTCTTGCAGAGATTTCCTATTAACAGTTGAGTGAAGATGATCTGATTTGGTAAAGAACAATTGTAACATCAAAATTTCAGTTTTTACTCCCATTTCTTCTGTTATAAAATAGGTTGTGCTATTGGAATGAAACATTATATCTATGTATTCTTAATGCTCCAAATTTTTAGTGTGTCCTATTGTATTGCCGGTAGAGACCTCAGAAGATTGTGATAGCAACTAATATCTTCTTTCACAAAAAGAGAGAGAAGTGGGGAACATAGTAAGTCCATTACTTGTAAGCTTCCAAACTGATTGAAACCTTACTCAAAGATGAGAGGGAGACAATGATCTAAAACTTTGACCCCCCCCTACAAAAGAAAAAGAAAAAAAGAAAAAAAGAAGGAAAAATGAAAATGAAATAGGATTCCCTCCTTTCATGCTTTAAGCATCAATTGAGGTTCTTAAAAGGGACAAGTTTAGACCTCATGGTGGACCATTATCTTGCCATGTGCGAAAGCTTAAACTTTCAAACTTTGCCTACCATTGTTATGCCTTCACATTTCACATCAAGCCCTATAACTTGCCATTATGTGATGCAATAGCTACTTTGTTATCTGTATAATTGGATCATTTTTCATTTCGTCACATATTCTTGGAGAATCTAAAAGGTGGCTGTAGGTAGTAATTTTGTTCAAAAGTCTGGTAGTTCTCTTAGCATATAATTTGGGTCGCTATTTACTTTTGAACAAAATTTGACAATGTCAAGTTCTTCACTAGTATTGTTTTTTGGGAAGTTTCTATTAGGATAAGCTTGCCAATACTGTAGATAAATAAGGACGGTGCATCCTTCAGCCATTTTGATTGCACGAGTTCTATCAGTTCTTTTTTTCTTCTTTTAATTTTTTGCTCCGATTATTTCTTATCACTCTTGACCTGGTAATGCAAGATCACAATTTCAGCAAAAATTCATAATAGAGGGTGAAAGTGTCACCAAATAATGCAAGACAACAATTTCAGAAAAAAACTCATAATGGTTTAAGCAATTTTGCAGCACTTCCTGTTCCTCCCCATTTGAGTACTGAAGAGCTTGAAGGAGAGAACAAGCATAATTTTAATTTTTTGCCCTGATTGTTTGTTATCACTCTTGACCTGGTAATGAATTTATGTAGTACTTCAGGCATTATTTAGATTAATGTTTTAATGTTTGAAACATCACTAAGCTTAAAGGGGGTACTTTTTGTCTAATGTGACTTATTATCTGAAGTTTGCTGTGGGAAAAAAATTGTGGTCTGAATTTGGTTTTCTGTTCTTCTTTGATTATGCTCTCTACTGTTTGGCTGTTGCTGGTTGTGTGATTCAACTAGATTGCTAACTTAGATAACGTGTGAAAATTCATACTGCAGATCAACTCAAATATATCAGGGAATCTGAAGAGATTCGACTTTCCATGCAACCTTTGGAACTGATTAAAAGGGTATGCGCTTCGTCAAGTATGTCCTATAACCCATTAAAACATAAGACATAAGTCTCATGAGTAAAAGTCAATTTGACATGGTAGTTCCAAGCAAATAAAAACCGAACCTCTCGAGAAAAAGAAAAAATGAAAGAAACAACTACTGAAAAACAGACTAAGCAAACTTAATAACTTGAATTAACTGACTGAGATGATTTGGTTTAATCAGTTTCTTTTGGTTTTAGTTTACACCCTGGTGTCAATGCACATTTGAAATTTTCTTTTGCATTGGAGTTCAAACTTTCATAATCTTCCTCTTCAGGTAAGGGAAATTCAGCAGGAAGCATATTATGAAACACAAGTTGTACAAGAAAAAGACTCCAAGCAGAATGCTGCCATTGATCTTTCTAAAAGATTGAAAGACTTCCGTTCTCTAAATGATGCTTCCAGCTTAAAAGGTACCATTCTTTTGCTATGAAATCTTCTCCCTCCCAGCCCCACCCTCCTATATACCATCCATAAACAAAACAACTGAATTGGTTTTGTTTATCTTCAGATTCCTAAACTTTGAGGTTTATGTCGATTCCAAAACTTTCATATTTCAAATTTATTCTCTCTGAATTTTCAAATTTTTTAAAATTCGTGGATTTACTAGACGCAAAATTCAAATTTATATCCAAATTACCAAATAGTTTTTTTTAAAAATTTCAAATTGGTCAAAGACTTATAAGACACAAAAGTGAAAGGTTAGACGCCTATTAAACACTTCTAAAAGTTATCACAAAGTTCAAGGACTAAACTTATAATTTAACCACTGCAAAACCAAACGTAGTCTATTAATTTAGTTTGATAGCCTTTTTAACCTCGATTTGGTGGACGGTTTTGTTCGCTTCAACCAGTTTAATCAGTTCAGTAATTCCATCTAAACTTTGGATATACTTTTTTTCCCTTACACCAATAATTAGTTTGATGTTGATTCTACTTGCTTACACTGGAACCACCGTCCTGTGTGTCATCATCTAATATAATGTGAATGGTTTGTGACACAGCTCTTGAGGAATGGCGCAAAAGGAAGATGGAAAGAGCAAGACTGCGTGAAATGGAGAAAAATGGGACACTGAGTTCTCCTTCTCAGCCTCGGAAACACAACTTCTAAATCTATATGAACTTTCTTTGTACCTTGTATAACAAACTTGTCTATGTTGATTCTAAAGTGAAAAGCATCATACCTCTTCTTTTTATACCTGGCTGCCCTTCTACAAAAACAGAGTTTGAGTGATTCAGAAGCTCAGAGTTGATTCTATATATTAAATTAGTACAACAATTGTTTATGGACAACATATGACGGGTATTTAGAATGTTTTACCTGTCACATTATCACTATATTTCAAAAGGTATCATAATATTACAAATTCA

mRNA sequence

TTAATGTTTAATCAAATTAATTATAATTAATACATTATTTAATATATAAGAAGAACCAAAGCTGAAGAGAAGAAGAGGGAGCAGCAGCTGAATTGAGTTGAAGAATTTCCCTTGAAACACAAATACGTGTTCTTGACTTCAAATTTCAGAGAGGAGTGTTTATACGAATCTCCTCCCATTTTCCCCAATTACCCACAAACTGATTTCCTTCATTTCTCAAAATCATCGCCATCATCAGCTACGGAATTCTGTGGGGTTGCTTCTAATTTCTTCGGCTTCGTTGTAAACAGCTGAATGGTATTTGGGAAATTGAAGGGAATATCGATTGAGAGTATCTGTAGAAGAAGAAAATGGAGGTTCAGCAGTCATGGAGATTGAGATTCTCGTTTAGGAATGCGACCATTGCTTTGTGCTTGTTGAATTTAGTGGCAGCTTTTCTTCTGCTTCAGGGTTTTTTATCTGCTGCTTCTTCCCGCAACAGACCCTCATCAACAAATCCCAATTTGGATCAACTCAAATATATCAGGGAATCTGAAGAGATTCGACTTTCCATGCAACCTTTGGAACTGATTAAAAGGGTAAGGGAAATTCAGCAGGAAGCATATTATGAAACACAAGTTGTACAAGAAAAAGACTCCAAGCAGAATGCTGCCATTGATCTTTCTAAAAGATTGAAAGACTTCCGTTCTCTAAATGATGCTTCCAGCTTAAAAGCTCTTGAGGAATGGCGCAAAAGGAAGATGGAAAGAGCAAGACTGCGTGAAATGGAGAAAAATGGGACACTGAGTTCTCCTTCTCAGCCTCGGAAACACAACTTCTAAATCTATATGAACTTTCTTTGTACCTTGTATAACAAACTTGTCTATGTTGATTCTAAAGTGAAAAGCATCATACCTCTTCTTTTTATACCTGGCTGCCCTTCTACAAAAACAGAGTTTGAGTGATTCAGAAGCTCAGAGTTGATTCTATATATTAAATTAGTACAACAATTGTTTATGGACAACATATGACGGGTATTTAGAATGTTTTACCTGTCACATTATCACTATATTTCAAAAGGTATCATAATATTACAAATTCA

Coding sequence (CDS)

ATGGAGGTTCAGCAGTCATGGAGATTGAGATTCTCGTTTAGGAATGCGACCATTGCTTTGTGCTTGTTGAATTTAGTGGCAGCTTTTCTTCTGCTTCAGGGTTTTTTATCTGCTGCTTCTTCCCGCAACAGACCCTCATCAACAAATCCCAATTTGGATCAACTCAAATATATCAGGGAATCTGAAGAGATTCGACTTTCCATGCAACCTTTGGAACTGATTAAAAGGGTAAGGGAAATTCAGCAGGAAGCATATTATGAAACACAAGTTGTACAAGAAAAAGACTCCAAGCAGAATGCTGCCATTGATCTTTCTAAAAGATTGAAAGACTTCCGTTCTCTAAATGATGCTTCCAGCTTAAAAGCTCTTGAGGAATGGCGCAAAAGGAAGATGGAAAGAGCAAGACTGCGTGAAATGGAGAAAAATGGGACACTGAGTTCTCCTTCTCAGCCTCGGAAACACAACTTCTAA

Protein sequence

MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSAASSRNRPSSTNPNLDQLKYIRESEEIRLSMQPLELIKRVREIQQEAYYETQVVQEKDSKQNAAIDLSKRLKDFRSLNDASSLKALEEWRKRKMERARLREMEKNGTLSSPSQPRKHNF

Homology

[Close]

BLAST of Lsi09G011900 vs. TrEMBL
Match: A0A0A0LNL1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G169800 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 9.8e-68
Identity = 141/156 (90.38%), Postives = 150/156 (96.15%), Query Frame = 1


Query: 1   MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSAASSRNRPSSTNPNLDQLKYIRE 60
           MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLS ASSRNRP STN  LDQLKYI+E
Sbjct: 1   MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSVASSRNRPLSTNHKLDQLKYIKE 60

Query: 61  SEEIRLSMQPLELIKRVREIQQEAYYETQVVQEKDSKQNAAIDLSKRLKDFRSLNDASSL 120
           ++EIRLSMQPLELIKRVREIQ+EAYYET+ VQ+KDSKQNAA+DLSKRLKDFRSLNDASSL
Sbjct: 61  AQEIRLSMQPLELIKRVREIQEEAYYETEAVQDKDSKQNAAMDLSKRLKDFRSLNDASSL 120

Query: 121 KALEEWRKRKMERARLREMEKNGTLSSPSQPRKHNF 157
           KALEEWRKRKMERARLRE+EKNGTL+SPSQ RKHNF
Sbjct: 121 KALEEWRKRKMERARLREIEKNGTLNSPSQLRKHNF 156

[Close]

BLAST of Lsi09G011900 vs. TrEMBL
Match: A0A0B0P3Z0_GOSAR (Hir1 OS=Gossypium arboreum GN=F383_01882 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 4.3e-47
Identity = 104/145 (71.72%), Postives = 123/145 (84.83%), Query Frame = 1


Query: 1   MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSAASSRNRPSSTNPNLDQLKYIRE 60
           ME+ QSWR R SF+NATIAL + N++ A  LLQ FLS+ASSR RPSS +PN     YI+E
Sbjct: 1   MEIIQSWRCRLSFKNATIALNIFNVIVALFLLQWFLSSASSRTRPSSNHPNSVGFDYIKE 60

Query: 61  SEEIRLSMQPLELIKRVREIQQEAYYETQVVQEKDSKQNAAIDLSKRLKDFRSLNDASSL 120
           +EE+R++MQPLELIKRV+EIQ+EAY E + +Q KD+KQ AA+DLSKRL+DFRSLNDASSL
Sbjct: 61  AEEMRIAMQPLELIKRVKEIQREAYIEPETIQPKDAKQTAAVDLSKRLQDFRSLNDASSL 120

Query: 121 KALEEWRKRKMERARLREMEKNGTL 146
           KALEEWRKRKMERAR REMEKNGTL
Sbjct: 121 KALEEWRKRKMERARQREMEKNGTL 145

[Close]

BLAST of Lsi09G011900 vs. TrEMBL
Match: A0A061EN23_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_021033 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 5.6e-47
Identity = 105/147 (71.43%), Postives = 125/147 (85.03%), Query Frame = 1


Query: 1   MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSAASSRNRPSSTNPNLDQLKYIRE 60
           ME+QQSWRLR S ++ATIAL + N++AA  LLQ FLS+ASSR + SS  PN  +  YI+E
Sbjct: 1   MEIQQSWRLRLSLKSATIALNIFNVLAALFLLQWFLSSASSRTKLSSNQPNSVEFNYIKE 60

Query: 61  SEEIRLSMQPLELIKRVREIQQEAYYETQVVQEKDSKQNAAIDLSKRLKDFRSLNDASSL 120
           SEEIRL++QPLELIKRV+EIQQEAY E + VQ  D+KQ AA+DLSKRLKDFRSLNDA+SL
Sbjct: 61  SEEIRLALQPLELIKRVKEIQQEAYAEQETVQPNDAKQTAAVDLSKRLKDFRSLNDAASL 120

Query: 121 KALEEWRKRKMERARLREMEKNGTLSS 148
           KALEEWRKRKMERAR RE+EKNGT++S
Sbjct: 121 KALEEWRKRKMERARQRELEKNGTVTS 147

[Close]

BLAST of Lsi09G011900 vs. TrEMBL
Match: W9S5X3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_009703 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.2e-46
Identity = 105/147 (71.43%), Postives = 126/147 (85.71%), Query Frame = 1


Query: 1   MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSAASSRNRPSSTNPNLDQLKYIRE 60
           ME QQSW+ R SFRNATI LCL+N+++  LLLQGFLS+ASSR++ S++     QL+YI+E
Sbjct: 1   MEGQQSWKPRLSFRNATIVLCLVNVISVLLLLQGFLSSASSRSKISTSQLTSAQLRYIKE 60

Query: 61  SEEIRLSMQPLELIKRVREIQQEAYYETQVVQEKDSKQNAAIDLSKRLKDFRSLNDASSL 120
           SEEIRL+MQPLELIKRV+EIQQEAY E + V+ KD+KQ AA DLSKRLKD RS NDA+SL
Sbjct: 61  SEEIRLAMQPLELIKRVKEIQQEAYVEPETVKVKDTKQTAAADLSKRLKDLRSFNDANSL 120

Query: 121 KALEEWRKRKMERARLREMEKNGTLSS 148
           KALEEWRKRKMERARLR++EKN TL+S
Sbjct: 121 KALEEWRKRKMERARLRQLEKNETLAS 147

[Close]

BLAST of Lsi09G011900 vs. TrEMBL
Match: A0A0B2PXZ5_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_041619 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 1.6e-46
Identity = 103/147 (70.07%), Postives = 122/147 (82.99%), Query Frame = 1


Query: 1   MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSAASSRNRPSSTNPNLDQLKYIRE 60
           MEVQQ WRLRFSFRNAT+ +C LN++ A  LL  FL++A +RN+ S+ N N  QL YI+E
Sbjct: 1   MEVQQWWRLRFSFRNATMVVCFLNIITAIFLLHAFLTSAYTRNKFSNANSNSAQLNYIKE 60

Query: 61  SEEIRLSMQPLELIKRVREIQQEAYYETQVVQEKDSKQNAAIDLSKRLKDFRSLNDASSL 120
           SEEIRL+M P+ELIKRVREI+QE Y E +  Q+KD+K  AA+DLSKRLKDFRSLNDA+SL
Sbjct: 61  SEEIRLAMLPVELIKRVREIEQEVYTEPETAQKKDTKLTAAVDLSKRLKDFRSLNDAASL 120

Query: 121 KALEEWRKRKMERARLREMEKNGTLSS 148
           KALEEWRKRKMERAR RE+EKNGT SS
Sbjct: 121 KALEEWRKRKMERARQRELEKNGTTSS 147

[Close]

BLAST of Lsi09G011900 vs. TAIR10
Match: AT1G04555.1 (AT1G04555.1 unknown protein)

HSP 1 Score: 164.1 bits (414), Expect = 7.0e-41
Identity = 90/149 (60.40%), Postives = 118/149 (79.19%), Query Frame = 1


Query: 3   VQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSAASSRNRPSSTNPNLD-QLKYIRES 62
           +   WR+RFSF+NATIAL ++N++    LLQGF +++SS +  SS+   +  QL+YI+E+
Sbjct: 1   MDHQWRMRFSFKNATIALTVINVLIFLFLLQGFFTSSSSPSSSSSSRRLISAQLRYIKEA 60

Query: 63  EEIRLSMQPLELIKRVREIQQEAYYETQVVQEKDSKQNAAIDLSKRLKDFRSLNDASSLK 122
           EE+RL MQPLELI+RVREI+QEA    +  Q+KD KQ  A+DLSKRLKDFR+LNDASSLK
Sbjct: 61  EELRLKMQPLELIRRVREIEQEASAGQETEQQKDVKQTTAVDLSKRLKDFRALNDASSLK 120

Query: 123 ALEEWRKRKMERARLREMEKNGTLSSPSQ 151
           ALEEWRKRKMERAR R++EK G +SS ++
Sbjct: 121 ALEEWRKRKMERARQRDLEKTGGVSSSTK 149

[Close]

BLAST of Lsi09G011900 vs. NCBI nr
Match: gi|449458868|ref|XP_004147168.1| (PREDICTED: uncharacterized protein LOC101209470 [Cucumis sativus])

HSP 1 Score: 264.2 bits (674), Expect = 1.4e-67
Identity = 141/156 (90.38%), Postives = 150/156 (96.15%), Query Frame = 1


Query: 1   MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSAASSRNRPSSTNPNLDQLKYIRE 60
           MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLS ASSRNRP STN  LDQLKYI+E
Sbjct: 1   MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSVASSRNRPLSTNHKLDQLKYIKE 60

Query: 61  SEEIRLSMQPLELIKRVREIQQEAYYETQVVQEKDSKQNAAIDLSKRLKDFRSLNDASSL 120
           ++EIRLSMQPLELIKRVREIQ+EAYYET+ VQ+KDSKQNAA+DLSKRLKDFRSLNDASSL
Sbjct: 61  AQEIRLSMQPLELIKRVREIQEEAYYETEAVQDKDSKQNAAMDLSKRLKDFRSLNDASSL 120

Query: 121 KALEEWRKRKMERARLREMEKNGTLSSPSQPRKHNF 157
           KALEEWRKRKMERARLRE+EKNGTL+SPSQ RKHNF
Sbjct: 121 KALEEWRKRKMERARLREIEKNGTLNSPSQLRKHNF 156

[Close]

BLAST of Lsi09G011900 vs. NCBI nr
Match: gi|659121510|ref|XP_008460696.1| (PREDICTED: uncharacterized protein LOC103499464 [Cucumis melo])

HSP 1 Score: 263.8 bits (673), Expect = 1.8e-67
Identity = 142/155 (91.61%), Postives = 149/155 (96.13%), Query Frame = 1


Query: 1   MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSAASSRNRPSSTNPNLDQLKYIRE 60
           MEVQQSWRLRFSFRNATIALC LNLVAAFLLLQGFLSAASSR+RP STN  LDQLKYIRE
Sbjct: 1   MEVQQSWRLRFSFRNATIALCFLNLVAAFLLLQGFLSAASSRSRPLSTNQKLDQLKYIRE 60

Query: 61  SEEIRLSMQPLELIKRVREIQQEAYYETQVVQEKDSKQNAAIDLSKRLKDFRSLNDASSL 120
           ++EIRLSMQPLELIKRVREIQ+EAYYET+ VQ+KDSKQNAAIDLSKRLKDFRSLNDASSL
Sbjct: 61  AQEIRLSMQPLELIKRVREIQEEAYYETEAVQDKDSKQNAAIDLSKRLKDFRSLNDASSL 120

Query: 121 KALEEWRKRKMERARLREMEKNGTLSSPSQPRKHN 156
           KALEEWRKRKMERARLREMEKNGTL+SPSQ RKHN
Sbjct: 121 KALEEWRKRKMERARLREMEKNGTLNSPSQLRKHN 155

[Close]

BLAST of Lsi09G011900 vs. NCBI nr
Match: gi|728842005|gb|KHG21448.1| (hir1 [Gossypium arboreum])

HSP 1 Score: 195.7 bits (496), Expect = 6.2e-47
Identity = 104/145 (71.72%), Postives = 123/145 (84.83%), Query Frame = 1


Query: 1   MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSAASSRNRPSSTNPNLDQLKYIRE 60
           ME+ QSWR R SF+NATIAL + N++ A  LLQ FLS+ASSR RPSS +PN     YI+E
Sbjct: 1   MEIIQSWRCRLSFKNATIALNIFNVIVALFLLQWFLSSASSRTRPSSNHPNSVGFDYIKE 60

Query: 61  SEEIRLSMQPLELIKRVREIQQEAYYETQVVQEKDSKQNAAIDLSKRLKDFRSLNDASSL 120
           +EE+R++MQPLELIKRV+EIQ+EAY E + +Q KD+KQ AA+DLSKRL+DFRSLNDASSL
Sbjct: 61  AEEMRIAMQPLELIKRVKEIQREAYIEPETIQPKDAKQTAAVDLSKRLQDFRSLNDASSL 120

Query: 121 KALEEWRKRKMERARLREMEKNGTL 146
           KALEEWRKRKMERAR REMEKNGTL
Sbjct: 121 KALEEWRKRKMERARQREMEKNGTL 145

[Close]

BLAST of Lsi09G011900 vs. NCBI nr
Match: gi|590660086|ref|XP_007035305.1| (Uncharacterized protein isoform 1 [Theobroma cacao])

HSP 1 Score: 195.3 bits (495), Expect = 8.0e-47
Identity = 105/147 (71.43%), Postives = 125/147 (85.03%), Query Frame = 1


Query: 1   MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSAASSRNRPSSTNPNLDQLKYIRE 60
           ME+QQSWRLR S ++ATIAL + N++AA  LLQ FLS+ASSR + SS  PN  +  YI+E
Sbjct: 1   MEIQQSWRLRLSLKSATIALNIFNVLAALFLLQWFLSSASSRTKLSSNQPNSVEFNYIKE 60

Query: 61  SEEIRLSMQPLELIKRVREIQQEAYYETQVVQEKDSKQNAAIDLSKRLKDFRSLNDASSL 120
           SEEIRL++QPLELIKRV+EIQQEAY E + VQ  D+KQ AA+DLSKRLKDFRSLNDA+SL
Sbjct: 61  SEEIRLALQPLELIKRVKEIQQEAYAEQETVQPNDAKQTAAVDLSKRLKDFRSLNDAASL 120

Query: 121 KALEEWRKRKMERARLREMEKNGTLSS 148
           KALEEWRKRKMERAR RE+EKNGT++S
Sbjct: 121 KALEEWRKRKMERARQRELEKNGTVTS 147

[Close]

BLAST of Lsi09G011900 vs. NCBI nr
Match: gi|703153416|ref|XP_010110675.1| (hypothetical protein L484_009703 [Morus notabilis])

HSP 1 Score: 194.1 bits (492), Expect = 1.8e-46
Identity = 105/147 (71.43%), Postives = 126/147 (85.71%), Query Frame = 1


Query: 1   MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSAASSRNRPSSTNPNLDQLKYIRE 60
           ME QQSW+ R SFRNATI LCL+N+++  LLLQGFLS+ASSR++ S++     QL+YI+E
Sbjct: 1   MEGQQSWKPRLSFRNATIVLCLVNVISVLLLLQGFLSSASSRSKISTSQLTSAQLRYIKE 60

Query: 61  SEEIRLSMQPLELIKRVREIQQEAYYETQVVQEKDSKQNAAIDLSKRLKDFRSLNDASSL 120
           SEEIRL+MQPLELIKRV+EIQQEAY E + V+ KD+KQ AA DLSKRLKD RS NDA+SL
Sbjct: 61  SEEIRLAMQPLELIKRVKEIQQEAYVEPETVKVKDTKQTAAADLSKRLKDLRSFNDANSL 120

Query: 121 KALEEWRKRKMERARLREMEKNGTLSS 148
           KALEEWRKRKMERARLR++EKN TL+S
Sbjct: 121 KALEEWRKRKMERARLRQLEKNETLAS 147

The following BLAST results are available for this feature:

BLAST of Lsi09G011900 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi09G011900 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LNL1_CUCSA	9.8e-68	90.38	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G169800 PE=4 SV=1	[more]
A0A0B0P3Z0_GOSAR	4.3e-47	71.72	Hir1 OS=Gossypium arboreum GN=F383_01882 PE=4 SV=1	[more]
A0A061EN23_THECC	5.6e-47	71.43	Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_021033 PE=4 SV=1	[more]
W9S5X3_9ROSA	1.2e-46	71.43	Uncharacterized protein OS=Morus notabilis GN=L484_009703 PE=4 SV=1	[more]
A0A0B2PXZ5_GLYSO	1.6e-46	70.07	Uncharacterized protein OS=Glycine soja GN=glysoja_041619 PE=4 SV=1	[more]

BLAST of Lsi09G011900 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G04555.1	7.0e-41	60.40	unknown protein	[more]

BLAST of Lsi09G011900 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449458868\|ref\|XP_004147168.1\|	1.4e-67	90.38	PREDICTED: uncharacterized protein LOC101209470 [Cucumis sativus]	[more]
gi\|659121510\|ref\|XP_008460696.1\|	1.8e-67	91.61	PREDICTED: uncharacterized protein LOC103499464 [Cucumis melo]	[more]
gi\|728842005\|gb\|KHG21448.1\|	6.2e-47	71.72	hir1 [Gossypium arboreum]	[more]
gi\|590660086\|ref\|XP_007035305.1\|	8.0e-47	71.43	Uncharacterized protein isoform 1 [Theobroma cacao]	[more]
gi\|703153416\|ref\|XP_010110675.1\|	1.8e-46	71.43	hypothetical protein L484_009703 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G011900.1	Lsi09G011900.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33344	FAMILY NOT NAMED	coord: 1..144 score: 6.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi09G011900	Csa2G169800	Cucumber (Chinese Long) v2	culsiB087
Lsi09G011900	CSPI02G09940	Wild cucumber (PI 183967)	cpilsiB085
Lsi09G011900	Cucsa.383260	Cucumber (Gy14) v1	cgylsiB619
Lsi09G011900	CmaCh08G010550	Cucurbita maxima (Rimu)	cmalsiB811
Lsi09G011900	CmoCh08G010260	Cucurbita moschata (Rifu)	cmolsiB797
Lsi09G011900	MELO3C023048	Melon (DHL92) v3.5.1	lsimeB025
Lsi09G011900	ClCG06G007300	Watermelon (Charleston Gray)	lsiwcgB029
Lsi09G011900	MELO3C023048.2	Melon (DHL92) v3.6.1	lsimedB027
Lsi09G011900	Cla97C06G117090	Watermelon (97103) v2	lsiwmbB026
Lsi09G011900	Bhi12G001343	Wax gourd	lsiwgoB027
Lsi09G011900	Cp4.1LG17g02030	Cucurbita pepo (Zucchini)	cpelsiB254
Lsi09G011900	CsGy2G010040	Cucumber (Gy14) v2	cgyblsiB080
Lsi09G011900	Carg10993	Silver-seed gourd	carlsiB981
Lsi09G011900	CsaV3_2G012360	Cucumber (Chinese Long) v3	cuclsiB098

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi09G011900	Watermelon (97103) v2	lsiwmbB015
Lsi09G011900	Watermelon (97103) v2	lsiwmbB029
Lsi09G011900	Wax gourd	lsiwgoB007
Lsi09G011900	Wax gourd	lsiwgoB042
Lsi09G011900	Wax gourd	lsiwgoB049
Lsi09G011900	Bottle gourd (USVL1VR-Ls)	lsilsiB011
Lsi09G011900	Bottle gourd (USVL1VR-Ls)	lsilsiB012
Lsi09G011900	Cucumber (Gy14) v1	cgylsiB412
Lsi09G011900	Cucurbita maxima (Rimu)	cmalsiB225
Lsi09G011900	Cucurbita maxima (Rimu)	cmalsiB331
Lsi09G011900	Cucurbita maxima (Rimu)	cmalsiB741
Lsi09G011900	Cucurbita moschata (Rifu)	cmolsiB213
Lsi09G011900	Cucurbita moschata (Rifu)	cmolsiB320
Lsi09G011900	Cucurbita moschata (Rifu)	cmolsiB518
Lsi09G011900	Cucurbita moschata (Rifu)	cmolsiB733
Lsi09G011900	Cucurbita pepo (Zucchini)	cpelsiB101
Lsi09G011900	Cucurbita pepo (Zucchini)	cpelsiB484
Lsi09G011900	Cucurbita pepo (Zucchini)	cpelsiB584
Lsi09G011900	Cucurbita pepo (Zucchini)	cpelsiB697
Lsi09G011900	Wild cucumber (PI 183967)	cpilsiB149
Lsi09G011900	Wild cucumber (PI 183967)	cpilsiB156
Lsi09G011900	Cucumber (Chinese Long) v2	culsiB150
Lsi09G011900	Cucumber (Chinese Long) v2	culsiB157
Lsi09G011900	Melon (DHL92) v3.5.1	lsimeB022
Lsi09G011900	Melon (DHL92) v3.5.1	lsimeB029
Lsi09G011900	Watermelon (Charleston Gray)	lsiwcgB016
Lsi09G011900	Watermelon (Charleston Gray)	lsiwcgB032
Lsi09G011900	Watermelon (97103) v1	lsiwmB013
Lsi09G011900	Watermelon (97103) v1	lsiwmB017
Lsi09G011900	Watermelon (97103) v1	lsiwmB040
Lsi09G011900	Cucumber (Gy14) v2	cgyblsiB136
Lsi09G011900	Cucumber (Gy14) v2	cgyblsiB143
Lsi09G011900	Melon (DHL92) v3.6.1	lsimedB024
Lsi09G011900	Melon (DHL92) v3.6.1	lsimedB032
Lsi09G011900	Silver-seed gourd	carlsiB204
Lsi09G011900	Silver-seed gourd	carlsiB209
Lsi09G011900	Silver-seed gourd	carlsiB713
Lsi09G011900	Silver-seed gourd	carlsiB876
Lsi09G011900	Cucumber (Chinese Long) v3	cuclsiB163
Lsi09G011900	Cucumber (Chinese Long) v3	cuclsiB173