Lsi09G011450 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi09G011450
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUbiquitin-conjugating enzyme E2, putative
Locationchr09 : 18356277 .. 18360965 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTCAAGTCAAGTAAACGCTCAATAATTTTTTTTATTTCATTCCATTTCTTCACTCTTCTTCTCAAATCCTTCCTTCACTCTTCCGATCCAATTTCCTTCTTTCCGCCATGCTTCTTTCCCGTCTCCGCCGTTGCTTCTCTTCAAAACCCTCCTCTTCCTCCGCCTACCGCCGCCTCTACACTCCTCCTCGTCCGATCGCCGACACACTCTGTCCCCGCCCAAATCCTTCCCCGCCGCCCTCTCCTCTTCCAATCTACGACGATGATCGTAACCGGCCAGAGTCTCCGATCGGCGACGGCGGAAGCGGAATTGAAGAAAAAACTAGTGCGATGTATCGGATTGAGAACAAAGAGGAGGTAGCAACGGACTGCAGCTTCGGGCCGGTTGCCGCCGATATTAGCGGAAATGAAGAAAAAACTAGTGCGATGTATCGGATTGAGAAGGAGGAGGAGGTGGCGACGGACTGCAGCTTCGGGCCGGTTGCCGCCGATATTAGCGGAAATGAAAAAAAAACTAGTGCGATGTATCGGATTGAGAACGAGTTGAGAGTGATGAACGATGAGGCGGCGTCGCACTGCAGTTTCGGGCCGGTGGGCGGCGATATTTTCCGGTGGGAAGGGGTTGTGATTGGGCCGGCCTGTTCTTGCTATGAAGGGGGTATTTTTCATCTTTCAATTCAATTTCCCTCCGACTACCCCTTATATCCTCCCTACGTCAAGTTTCTAACCAAGGTTAGTTATGTCCATTTTCCTCATTTTATTAATAATATTATTATTAATTTTCTTTTAACTGTTTGAGAATTGCATTTTGGAAAGCCTGACCTATTCTGAAATTGTAAATTTGTAATTGTATGTATGCCTAAATTATAGGTATTTTGGTAATATCTTATAACATTTTAAGAAAGGTTAAAAAATGTTTTTACTAGAGGTGATGTAATTTAGGTTTTTGAACTGACTGATTTATTAATAATAAGAAATTAAATCGATGTCCAATAAATGATAAAACCAACGATTTGATTTTTTAAAAAAGTTTTGTTCCATGTCGGTTTGGTTTTTGATTTTAGATTCAATTAATTTTTTTTCTCAACTTTTATTTTGAATTGGATTAAAATGGGGTGGGTGGTTGTTTAATAAAGTTTCATCATATATGACAACATACTAAAAGTTTCAAATAATACATGGTTCATTTTAAGGTTTATATATACTATCAATTTAATTTTGGTGAGTATTTCAATAAAAAAATAAAGCCAAACCAATAATTTTTTTATTTACACTAAATACAAACCAATGTCCAATTTAGTAGTGGAGGCTTGGATGGATTTGATTTTTCTAGTTTTTCAAGTTTTTTTTTTTTGTTGCACTCCTAATGAAAACTATTAGTATATTATTTAAAAAATACCCGTAAAATATTTTATCTATACTACAAAATACTCTTGAAAAAGTTGCATTAATATTCTTAATATTTTTTTAAAGAATAAATAAAAAGTTATACTAGTGTTAGTATTTGGATGGAAACCATTTATTTACACTTTATCACCTCTCTCTTTCTTTCTTCTCTCTCCTCTACTTCAAACTATGGTCTAACACATTTTCACATAGATACATCATATTTTCTCCCATTTGTTCAATTCTTACACTAATCTCAACAACCAAACTAGACCAAAAATTTAAAGTGAAAATATAAAATCCCACAAAATTCTACGGAGTCCAAAAATAAATAACTCCCATCAAAACTAAGCAAAGCAATGAATCACATTATGGAAAACATTCTTAATTGATCACAATAAATAGACTAATTGGAATGCAAAATGGATCAACAAAATCTTCATCGCTACAAATTTGGTAATGCTCATGTTTTCTTTCTCTTCACTCCTAGTTGTCTTCAAAACTATGATACCAATTTTTAGCTTGTCTCTCATCTGATGTATTAAATGTCATATTAACTCATACTTAATTACTAAGATACAATTTTGTTAAAACATTTAAGTTTTAAGGTTTTTTGGTGGGTTACCCGTTTTATTATTCTCTTTTCTTCTTGTTATTGCCAATATACGTTGATTGAAGGGGTAGTTTTAGATATAGGAGAATGGAGGAAGGGGAAAAAGAGGGTGTCAAAGAAGAGTGGAAAAAACAGAGGAAAAGTTGGAAGTGTCATTGAAACAGAAAAAAGAGAGTGAAATGAGAGGGAGAGCTGAGGGTGATAAATGATTTCCATCCATATGGTAATAGTAACATTTTTCCTTTTTCTTTTTTCCTTTTTTTAAGAATAAGACTTTTAATATCATTTTTGAAAGTTTAAGGATATTTTTCAAATCTATCCATATATTAACGGTAAGAATATTTATTTATTTTTTTAAGAAAATTAAGAGTATTATTGAAACTTTTGAAAATTTAGGGATATTTTTTAAATAAATTAGTAATGTGAGTAGTTCTATCTAAAATAAGTAGTAAGAATATTTTTAATTTTTTTTTTAAATTGTTATTAAAACTTTTGAAAGTTTATGAGTATTATCGTGTTCAAAAATATTTTTTTATACCTTAGCCAAAAGTATATCTTTTCATGGTAGGTTAAGTTGAGGATTTTATCTAATTTCTATTATGTTAGTAGATTTTGTTATCTAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAACAATGCACTCTCAACGTGTTGTAAATATATTTTTCTAAATAACTTCTCGAAAAATTTAAATGGTACCTTCATTTATTAATTTTTGTAACAATGTTTAAAGAGAGAATAAAATACAAGTATTTGCAACCGTGATAAATATTTCTCTAAACGTTATAAACCATTGATTAATATAATTAGGGTATTGTCATATTTTATTTTAAAGTGTTAATTGATATAATTATTAGTTTAAAATTTTAATTTACTCATAACCGACAAGGTTTAAGGGGAATAAATCGATTTCCCCCTAAAATATTTTAAGTCTGTTTTTCTTTGTTCTTCGTTTTTCTTCTGTTTACGCCTCTATTTCTTCATTTTTCTTCCGTTTACATCTCTATTTCGTAGAAGGCATTTTGATGTGTAAGACTTAGATTTTAAAATTTTAAAATAAGATGATTGAGTTTAAAGTATAAAACCATGAATGTTTTGATGTATTATGTATTTTTATTTTAGTCGGTTACTGATTCTTTCAGTTTAGTTAGTTACTTAGTTGGTTCTTTATTTAATCCTTGTAATTCTTTAGTTCTTTAGTTACGGTTAGTAACTAATTCTTTTAGGTTATTACTCTAAAGTTTAGTATTTAAACTAAACTTCTCTTTCATTTTGAATACAATTTGAAGTATTTCAGAATTTAGACTTGTCTTTCAACTTAGTGTTCCTATATTAACAGACATATTGCAAAGTTTTTTTACACATATTTAATTTGTATACGTAAGAGATTTGTGTTTAATTCTATCTCTGATTGTCTCTACTAAAAAGAAGTTCCATGTTATGTGTGTTGATTGAAACAGATATTCCATCCAAATGTAGGGTTAGATGGAAGCATTTACTTGGACATATTGAATGAAAATTGGTCTTCAGTATTGACTATTGAGAAAGTTCTAATTTCAATATGCTCAGTCCTTTCAAATCCAATTCCTCCAACCTCCATTAATGAAGCTTCAAGAATGTACCTCAATAATTGGCTCAATTTCAATGGGATTGCAAGAGAATGGACCAAAATATATGCAATGCCAAATTGATCTCATCACTAAACAAACACCATCATATTGTAAATAGTATGTATTGAATGATATCATTCAATTGGTTTTAGGGCTCCTAAAAAGGTTGGATTTTGATCTTGGTGAATGTTTTCTGTTATTTTTGCCAAGCCCAACATTGTATTTGATTGTATAATGATCTTAGTTTGTGTAATTATTTATAGTTTCTAATTATAACGAGTATATTCAGTTGAATGATAATTAATT

mRNA sequence

GTCAAGTCAAGTAAACGCTCAATAATTTTTTTTATTTCATTCCATTTCTTCACTCTTCTTCTCAAATCCTTCCTTCACTCTTCCGATCCAATTTCCTTCTTTCCGCCATGCTTCTTTCCCGTCTCCGCCGTTGCTTCTCTTCAAAACCCTCCTCTTCCTCCGCCTACCGCCGCCTCTACACTCCTCCTCGTCCGATCGCCGACACACTCTGTCCCCGCCCAAATCCTTCCCCGCCGCCCTCTCCTCTTCCAATCTACGACGATGATCGTAACCGGCCAGAGTCTCCGATCGGCGACGGCGGAAGCGGAATTGAAGAAAAAACTAGTGCGATGTATCGGATTGAGAACAAAGAGGAGGTAGCAACGGACTGCAGCTTCGGGCCGGTTGCCGCCGATATTAGCGGAAATGAAGAAAAAACTAGTGCGATGTATCGGATTGAGAAGGAGGAGGAGGTGGCGACGGACTGCAGCTTCGGGCCGGTTGCCGCCGATATTAGCGGAAATGAAAAAAAAACTAGTGCGATGTATCGGATTGAGAACGAGTTGAGAGTGATGAACGATGAGGCGGCGTCGCACTGCAGTTTCGGGCCGGTGGGCGGCGATATTTTCCGGTGGGAAGGGGTTGTGATTGGGCCGGCCTGTTCTTGCTATGAAGGGGGTATTTTTCATCTTTCAATTCAATTTCCCTCCGACTACCCCTTATATCCTCCCTACGTCAAGTTTCTAACCAAGATATTCCATCCAAATGTAGGGTTAGATGGAAGCATTTACTTGGACATATTGAATGAAAATTGGTCTTCAGTATTGACTATTGAGAAAGTTCTAATTTCAATATGCTCAGTCCTTTCAAATCCAATTCCTCCAACCTCCATTAATGAAGCTTCAAGAATGTACCTCAATAATTGGCTCAATTTCAATGGGATTGCAAGAGAATGGACCAAAATATATGCAATGCCAAATTGATCTCATCACTAAACAAACACCATCATATTGTAAATAGTATGTATTGAATGATATCATTCAATTGGTTTTAGGGCTCCTAAAAAGGTTGGATTTTGATCTTGGTGAATGTTTTCTGTTATTTTTGCCAAGCCCAACATTGTATTTGATTGTATAATGATCTTAGTTTGTGTAATTATTTATAGTTTCTAATTATAACGAGTATATTCAGTTGAATGATAATTAATT

Coding sequence (CDS)

ATGCTTCTTTCCCGTCTCCGCCGTTGCTTCTCTTCAAAACCCTCCTCTTCCTCCGCCTACCGCCGCCTCTACACTCCTCCTCGTCCGATCGCCGACACACTCTGTCCCCGCCCAAATCCTTCCCCGCCGCCCTCTCCTCTTCCAATCTACGACGATGATCGTAACCGGCCAGAGTCTCCGATCGGCGACGGCGGAAGCGGAATTGAAGAAAAAACTAGTGCGATGTATCGGATTGAGAACAAAGAGGAGGTAGCAACGGACTGCAGCTTCGGGCCGGTTGCCGCCGATATTAGCGGAAATGAAGAAAAAACTAGTGCGATGTATCGGATTGAGAAGGAGGAGGAGGTGGCGACGGACTGCAGCTTCGGGCCGGTTGCCGCCGATATTAGCGGAAATGAAAAAAAAACTAGTGCGATGTATCGGATTGAGAACGAGTTGAGAGTGATGAACGATGAGGCGGCGTCGCACTGCAGTTTCGGGCCGGTGGGCGGCGATATTTTCCGGTGGGAAGGGGTTGTGATTGGGCCGGCCTGTTCTTGCTATGAAGGGGGTATTTTTCATCTTTCAATTCAATTTCCCTCCGACTACCCCTTATATCCTCCCTACGTCAAGTTTCTAACCAAGATATTCCATCCAAATGTAGGGTTAGATGGAAGCATTTACTTGGACATATTGAATGAAAATTGGTCTTCAGTATTGACTATTGAGAAAGTTCTAATTTCAATATGCTCAGTCCTTTCAAATCCAATTCCTCCAACCTCCATTAATGAAGCTTCAAGAATGTACCTCAATAATTGGCTCAATTTCAATGGGATTGCAAGAGAATGGACCAAAATATATGCAATGCCAAATTGA

Protein sequence

MLLSRLRRCFSSKPSSSSAYRRLYTPPRPIADTLCPRPNPSPPPSPLPIYDDDRNRPESPIGDGGSGIEEKTSAMYRIENKEEVATDCSFGPVAADISGNEEKTSAMYRIEKEEEVATDCSFGPVAADISGNEKKTSAMYRIENELRVMNDEAASHCSFGPVGGDIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYPLYPPYVKFLTKIFHPNVGLDGSIYLDILNENWSSVLTIEKVLISICSVLSNPIPPTSINEASRMYLNNWLNFNGIAREWTKIYAMPN
Homology
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BLAST of Lsi09G011450 vs. Swiss-Prot
Match: UBC2_CAEEL (Ubiquitin-conjugating enzyme E2 2 OS=Caenorhabditis elegans GN=let-70 PE=1 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 2.3e-36
Identity = 71/146 (48.63%), Postives = 99/146 (67.81%), Query Frame = 1 

Query: 138 AMYRIENELRVMNDEAASHCSFGPVGGDIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYP 197
           A+ RI+ EL+ +  +  + CS GPVG D+F W+  ++GP  S Y+GG+F L+I FP+DYP
Sbjct: 2   ALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYP 61

Query: 198 LYPPYVKFLTKIFHPNVGLDGSIYLDILNENWSSVLTIEKVLISICSVLSNPIPPTS-IN 257
             PP V F T+I+HPN+  +GSI LDIL   WS  LTI KVL+SICS+L +P P    + 
Sbjct: 62  FKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVP 121

Query: 258 EASRMYLNNWLNFNGIAREWTKIYAM 283
           E +R+Y  +   +N +AREWT+ YAM
Sbjct: 122 EIARIYKTDRERYNQLAREWTQKYAM 147

[Close]
BLAST of Lsi09G011450 vs. Swiss-Prot
Match: UBCD1_DROME (Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster GN=eff PE=2 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 2.3e-36
Identity = 71/146 (48.63%), Postives = 98/146 (67.12%), Query Frame = 1 

Query: 138 AMYRIENELRVMNDEAASHCSFGPVGGDIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYP 197
           A+ RI  EL+ +  +  + CS GPVG D+F W+  ++GP  S Y+GG+F L+I FP+DYP
Sbjct: 2   ALKRINKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPDSPYQGGVFFLTIHFPTDYP 61

Query: 198 LYPPYVKFLTKIFHPNVGLDGSIYLDILNENWSSVLTIEKVLISICSVLSNPIPPTS-IN 257
             PP V F T+I+HPN+  +GSI LDIL   WS  LTI KVL+SICS+L +P P    + 
Sbjct: 62  FKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVP 121

Query: 258 EASRMYLNNWLNFNGIAREWTKIYAM 283
           E +R+Y  +   +N +AREWT+ YAM
Sbjct: 122 EIARIYKTDREKYNELAREWTRKYAM 147

[Close]
BLAST of Lsi09G011450 vs. Swiss-Prot
Match: UB2D1_HUMAN (Ubiquitin-conjugating enzyme E2 D1 OS=Homo sapiens GN=UBE2D1 PE=1 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 3.1e-36
Identity = 68/146 (46.58%), Postives = 99/146 (67.81%), Query Frame = 1 

Query: 138 AMYRIENELRVMNDEAASHCSFGPVGGDIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYP 197
           A+ RI+ EL  +  +  +HCS GPVG D+F W+  ++GP  S Y+GG+F L++ FP+DYP
Sbjct: 2   ALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYP 61

Query: 198 LYPPYVKFLTKIFHPNVGLDGSIYLDILNENWSSVLTIEKVLISICSVLSNPIPPTS-IN 257
             PP + F TKI+HPN+  +GSI LDIL   WS  LT+ KVL+SICS+L +P P    + 
Sbjct: 62  FKPPKIAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVP 121

Query: 258 EASRMYLNNWLNFNGIAREWTKIYAM 283
           + +++Y ++   +N  AREWT+ YAM
Sbjct: 122 DIAQIYKSDKEKYNRHAREWTQKYAM 147

[Close]
BLAST of Lsi09G011450 vs. Swiss-Prot
Match: UB2D1_MOUSE (Ubiquitin-conjugating enzyme E2 D1 OS=Mus musculus GN=Ube2d1 PE=2 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 3.1e-36
Identity = 68/146 (46.58%), Postives = 99/146 (67.81%), Query Frame = 1 

Query: 138 AMYRIENELRVMNDEAASHCSFGPVGGDIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYP 197
           A+ RI+ EL  +  +  +HCS GPVG D+F W+  ++GP  S Y+GG+F L++ FP+DYP
Sbjct: 2   ALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYP 61

Query: 198 LYPPYVKFLTKIFHPNVGLDGSIYLDILNENWSSVLTIEKVLISICSVLSNPIPPTS-IN 257
             PP + F TKI+HPN+  +GSI LDIL   WS  LT+ KVL+SICS+L +P P    + 
Sbjct: 62  FKPPKIAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVP 121

Query: 258 EASRMYLNNWLNFNGIAREWTKIYAM 283
           + +++Y ++   +N  AREWT+ YAM
Sbjct: 122 DIAQIYKSDKEKYNRHAREWTQKYAM 147

[Close]
BLAST of Lsi09G011450 vs. Swiss-Prot
Match: UB2D1_BOVIN (Ubiquitin-conjugating enzyme E2 D1 OS=Bos taurus GN=UBE2D1 PE=2 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 3.1e-36
Identity = 68/146 (46.58%), Postives = 99/146 (67.81%), Query Frame = 1 

Query: 138 AMYRIENELRVMNDEAASHCSFGPVGGDIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYP 197
           A+ RI+ EL  +  +  +HCS GPVG D+F W+  ++GP  S Y+GG+F L++ FP+DYP
Sbjct: 2   ALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYP 61

Query: 198 LYPPYVKFLTKIFHPNVGLDGSIYLDILNENWSSVLTIEKVLISICSVLSNPIPPTS-IN 257
             PP + F TKI+HPN+  +GSI LDIL   WS  LT+ KVL+SICS+L +P P    + 
Sbjct: 62  FKPPKIAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVP 121

Query: 258 EASRMYLNNWLNFNGIAREWTKIYAM 283
           + +++Y ++   +N  AREWT+ YAM
Sbjct: 122 DIAQIYKSDKEKYNRHAREWTQKYAM 147

[Close]
BLAST of Lsi09G011450 vs. TrEMBL
Match: A0A0A0LI75_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G138770 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 1.2e-66
Identity = 127/184 (69.02%), Postives = 148/184 (80.43%), Query Frame = 1 

Query: 101 EEKTSAMYRIEKEEEVATDCSFGPVAADISGNEKKTSAMYRIENELRVMNDEAASHCSFG 160
           EEKTS    I+ ++E   D S+G      +  EK + AMYRIENEL+ MN+E A+HCSFG
Sbjct: 27  EEKTSWTRGIDHQKE---DISWG------NNEEKSSVAMYRIENELKSMNEEVATHCSFG 86

Query: 161 PVGGDIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYPLYPPYVKFLTKIFHPNVGLDGSI 220
           PVG DIFRWEGVVIGPA SCYEGGIFH+SIQFPSDYP  PP + FLTKIFHPNV +DGSI
Sbjct: 87  PVGDDIFRWEGVVIGPAGSCYEGGIFHVSIQFPSDYPFTPPSINFLTKIFHPNVEVDGSI 146

Query: 221 YLDILNENWSSVLTIEKVLISICSVLSNPIPPTSINEASRMYLNNWLNFNGIAREWTKIY 280
            +DILNENWSS LTIEK+L+SICS+LSNPIP  S NEAS M+LNNWL+FN  A++WTK+Y
Sbjct: 147 GMDILNENWSSALTIEKLLLSICSILSNPIPHGSTNEASTMFLNNWLDFNDTAKQWTKLY 201

Query: 281 AMPN 285
           AMPN
Sbjct: 207 AMPN 201

[Close]
BLAST of Lsi09G011450 vs. TrEMBL
Match: B9RWH5_RICCO (Ubiquitin-conjugating enzyme E2, putative OS=Ricinus communis GN=RCOM_1019510 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.1e-35
Identity = 73/152 (48.03%), Postives = 103/152 (67.76%), Query Frame = 1 

Query: 131 GNEKKTSAMYRIENELRVMNDEAASHCSFGPVGGDIFRWEGVVIGPACSCYEGGIFHLSI 190
           G   +++A  RI+NEL+   +   +HCS+G + GD+F+W+  ++GP  + YEGG+F LSI
Sbjct: 33  GTSSRSNAKLRIQNELQHAKNNPPTHCSYGVMAGDVFKWQAAIMGPPDTPYEGGVFFLSI 92

Query: 191 QFPSDYPLYPPYVKFLTKIFHPNVGLDGSIYLDILNENWSSVLTIEKVLISICSVLSNPI 250
           +F  DYP  PP VKFLTK+FHPN+  DGSI++DIL   WS  L IEK+L+SICS+L +P 
Sbjct: 93  EFTDDYPFNPPKVKFLTKVFHPNISHDGSIHVDILGRQWSPALGIEKLLLSICSLLPDPN 152

Query: 251 PPTSINEASRMYLNNWLNFNGIAREWTKIYAM 283
                N   ++YL +  ++N  AREWT  YAM
Sbjct: 153 VKFQ-NPICKLYLADRKSYNKKAREWTIKYAM 183

[Close]
BLAST of Lsi09G011450 vs. TrEMBL
Match: H2VVD5_CAEJA (Uncharacterized protein OS=Caenorhabditis japonica PE=3 SV=2)

HSP 1 Score: 157.9 bits (398), Expect = 1.8e-35
Identity = 79/178 (44.38%), Postives = 110/178 (61.80%), Query Frame = 1 

Query: 106 AMYRIEKEEEVATDCSFGPVAADISGNEKKTSAMYRIENELRVMNDEAASHCSFGPVGGD 165
           A+ R   E      CS G  A  I+ +     A+ RI+ EL+ +  +  + CS GPVG D
Sbjct: 98  ALTRTALEARRRPSCSPG-AAGSINKSHNTDMALKRIQKELQDLGRDPPAQCSAGPVGDD 157

Query: 166 IFRWEGVVIGPACSCYEGGIFHLSIQFPSDYPLYPPYVKFLTKIFHPNVGLDGSIYLDIL 225
           +F W+  ++GP  S Y+GG+F L+I FP+DYP  PP V F T+I+HPN+  +GSI LDIL
Sbjct: 158 LFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDIL 217

Query: 226 NENWSSVLTIEKVLISICSVLSNPIPPTS-INEASRMYLNNWLNFNGIAREWTKIYAM 283
              WS  LTI KVL+SICS+L +P P    + E +R+Y  +   +N +AREWT+ YAM
Sbjct: 218 RSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRERYNQLAREWTQKYAM 274

[Close]
BLAST of Lsi09G011450 vs. TrEMBL
Match: I3MW74_ICTTR (Uncharacterized protein OS=Ictidomys tridecemlineatus PE=3 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 2.4e-35
Identity = 72/146 (49.32%), Postives = 101/146 (69.18%), Query Frame = 1 

Query: 138 AMYRIENELRVMNDEAASHCSFGPVGGDIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYP 197
           A+ RI  EL  +  +  + CS GPVG D+FRW+  ++GP+ S Y+GG+F LSIQFPSDYP
Sbjct: 2   ALKRIHKELLDLARDPPAQCSAGPVGDDMFRWQAAIMGPSDSPYQGGVFFLSIQFPSDYP 61

Query: 198 LYPPYVKFLTKIFHPNVGLDGSIYLDILNENWSSVLTIEKVLISICSVLSNPIPPTS-IN 257
             PP + F+T+I+HPN+   G+I LDIL   WS  LTI KVL+SICS+L +P P    + 
Sbjct: 62  FKPPKITFITRIYHPNINRSGNICLDILRSEWSPALTISKVLLSICSMLCDPNPDDPLVP 121

Query: 258 EASRMYLNNWLNFNGIAREWTKIYAM 283
           E +++YL +   ++ +AREWT+ YAM
Sbjct: 122 EIAKIYLKDRRKYDRVAREWTEKYAM 147

[Close]
BLAST of Lsi09G011450 vs. TrEMBL
Match: A0A0B7B391_9EUPU (Uncharacterized protein OS=Arion vulgaris GN=ORF158627 PE=3 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 2.4e-35
Identity = 74/145 (51.03%), Postives = 100/145 (68.97%), Query Frame = 1 

Query: 138 AMYRIENELRVMNDEAASHCSFGPVGGDIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYP 197
           A+ RI+ EL+    +  S+CS GPVG DIF+W+  ++GPA S Y+GG+F L+I FPSDYP
Sbjct: 2   AVKRIQKELQDFAKDPPSNCSAGPVGDDIFQWQATILGPADSPYQGGVFFLTITFPSDYP 61

Query: 198 LYPPYVKFLTKIFHPNVGLDGSIYLDILNENWSSVLTIEKVLISICSVLSNPIPPTS-IN 257
             PP + F TKI+HPN+  +GSI LDIL   WS  LTI KVL+SICS+L++P P    + 
Sbjct: 62  FKPPKIAFSTKIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLTDPNPDDPLVP 121

Query: 258 EASRMYLNNWLNFNGIAREWTKIYA 282
           E +R +  N   +N +A+EWTK YA
Sbjct: 122 EIARTFKTNRSEYNRLAQEWTKKYA 146

[Close]
BLAST of Lsi09G011450 vs. TAIR10
Match: AT3G08690.1 (AT3G08690.1 ubiquitin-conjugating enzyme 11)

HSP 1 Score: 146.4 bits (368), Expect = 2.8e-35
Identity = 70/146 (47.95%), Postives = 93/146 (63.70%), Query Frame = 1 

Query: 138 AMYRIENELRVMNDEAASHCSFGPVGGDIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYP 197
           A  RI  EL+ +  +  S+CS GPV  D+F W+  ++GP  S Y GG+F +SI FP DYP
Sbjct: 2   ASKRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYP 61

Query: 198 LYPPYVKFLTKIFHPNVGLDGSIYLDILNENWSSVLTIEKVLISICSVLSNPIPPTS-IN 257
             PP V F TK++HPN+  +GSI LDIL E WS  LTI KVL+SICS+L++P P    + 
Sbjct: 62  FKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121

Query: 258 EASRMYLNNWLNFNGIAREWTKIYAM 283
           E + MY  +   +   AR WT+ YAM
Sbjct: 122 EIAHMYKTDRSKYESTARSWTQKYAM 147

[Close]
BLAST of Lsi09G011450 vs. TAIR10
Match: AT4G27960.2 (AT4G27960.2 ubiquitin conjugating enzyme 9)

HSP 1 Score: 144.8 bits (364), Expect = 8.0e-35
Identity = 69/146 (47.26%), Postives = 93/146 (63.70%), Query Frame = 1 

Query: 138 AMYRIENELRVMNDEAASHCSFGPVGGDIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYP 197
           A  RI  EL+ +  +  + CS GPV  D+F W+  ++GP+ S Y GG+F ++I FP DYP
Sbjct: 32  ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYP 91

Query: 198 LYPPYVKFLTKIFHPNVGLDGSIYLDILNENWSSVLTIEKVLISICSVLSNPIPPTS-IN 257
             PP V F TK+FHPN+  +GSI LDIL E WS  LTI KVL+SICS+L++P P    + 
Sbjct: 92  FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 151

Query: 258 EASRMYLNNWLNFNGIAREWTKIYAM 283
           E + MY  +   +   AR WT+ YAM
Sbjct: 152 EIAHMYKTDKNKYESTARTWTQKYAM 177

[Close]
BLAST of Lsi09G011450 vs. TAIR10
Match: AT5G53300.1 (AT5G53300.1 ubiquitin-conjugating enzyme 10)

HSP 1 Score: 144.4 bits (363), Expect = 1.0e-34
Identity = 69/146 (47.26%), Postives = 93/146 (63.70%), Query Frame = 1 

Query: 138 AMYRIENELRVMNDEAASHCSFGPVGGDIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYP 197
           A  RI  EL+ +  +  + CS GPV  D+F W+  ++GP+ S Y GG+F ++I FP DYP
Sbjct: 2   ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYP 61

Query: 198 LYPPYVKFLTKIFHPNVGLDGSIYLDILNENWSSVLTIEKVLISICSVLSNPIPPTS-IN 257
             PP V F TK+FHPN+  +GSI LDIL E WS  LTI KVL+SICS+L++P P    + 
Sbjct: 62  FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121

Query: 258 EASRMYLNNWLNFNGIAREWTKIYAM 283
           E + MY  +   +   AR WT+ YAM
Sbjct: 122 EIAHMYKTDKNKYESTARSWTQKYAM 147

[Close]
BLAST of Lsi09G011450 vs. TAIR10
Match: AT5G56150.1 (AT5G56150.1 ubiquitin-conjugating enzyme 30)

HSP 1 Score: 143.7 bits (361), Expect = 1.8e-34
Identity = 66/146 (45.21%), Postives = 94/146 (64.38%), Query Frame = 1 

Query: 138 AMYRIENELRVMNDEAASHCSFGPVGGDIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYP 197
           A  RI  ELR +  +    CS GP G D+F+W+  ++GPA S + GG+F ++I FP DYP
Sbjct: 2   ASKRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYP 61

Query: 198 LYPPYVKFLTKIFHPNVGLDGSIYLDILNENWSSVLTIEKVLISICSVLSNPIPPTS-IN 257
             PP V F TK++HPN+  +GSI LDIL E WS  LT+ KVL+SICS+L++P P    + 
Sbjct: 62  FKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLVP 121

Query: 258 EASRMYLNNWLNFNGIAREWTKIYAM 283
           E + +Y  + + +   A+ WT+ YAM
Sbjct: 122 EIAHIYKTDRVKYESTAQSWTQKYAM 147

[Close]
BLAST of Lsi09G011450 vs. TAIR10
Match: AT5G41700.4 (AT5G41700.4 ubiquitin conjugating enzyme 8)

HSP 1 Score: 142.9 bits (359), Expect = 3.0e-34
Identity = 70/147 (47.62%), Postives = 93/147 (63.27%), Query Frame = 1 

Query: 138 AMYRIENELRVMNDEAASHCSF-GPVGGDIFRWEGVVIGPACSCYEGGIFHLSIQFPSDY 197
           A  RI  EL+ +  +  + C F GPV  D+F W+  ++GPA S Y GG+F ++I FP DY
Sbjct: 2   ASKRILKELKDLQKDPPTSCIFAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 61

Query: 198 PLYPPYVKFLTKIFHPNVGLDGSIYLDILNENWSSVLTIEKVLISICSVLSNPIPPTS-I 257
           P  PP V F TK+FHPN+  +GSI LDIL E WS  LTI KVL+SICS+L++P P    +
Sbjct: 62  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 121

Query: 258 NEASRMYLNNWLNFNGIAREWTKIYAM 283
            E + MY  +   +   AR WT+ YAM
Sbjct: 122 PEIAHMYKTDRAKYEATARNWTQKYAM 148

[Close]
BLAST of Lsi09G011450 vs. NCBI nr
Match: gi|449442475|ref|XP_004139007.1| (PREDICTED: ubiquitin-conjugating enzyme E2 5A-like [Cucumis sativus])

HSP 1 Score: 261.5 bits (667), Expect = 1.7e-66
Identity = 127/184 (69.02%), Postives = 148/184 (80.43%), Query Frame = 1 

Query: 101 EEKTSAMYRIEKEEEVATDCSFGPVAADISGNEKKTSAMYRIENELRVMNDEAASHCSFG 160
           EEKTS    I+ ++E   D S+G      +  EK + AMYRIENEL+ MN+E A+HCSFG
Sbjct: 27  EEKTSWTRGIDHQKE---DISWG------NNEEKSSVAMYRIENELKSMNEEVATHCSFG 86

Query: 161 PVGGDIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYPLYPPYVKFLTKIFHPNVGLDGSI 220
           PVG DIFRWEGVVIGPA SCYEGGIFH+SIQFPSDYP  PP + FLTKIFHPNV +DGSI
Sbjct: 87  PVGDDIFRWEGVVIGPAGSCYEGGIFHVSIQFPSDYPFTPPSINFLTKIFHPNVEVDGSI 146

Query: 221 YLDILNENWSSVLTIEKVLISICSVLSNPIPPTSINEASRMYLNNWLNFNGIAREWTKIY 280
            +DILNENWSS LTIEK+L+SICS+LSNPIP  S NEAS M+LNNWL+FN  A++WTK+Y
Sbjct: 147 GMDILNENWSSALTIEKLLLSICSILSNPIPHGSTNEASTMFLNNWLDFNDTAKQWTKLY 201

Query: 281 AMPN 285
           AMPN
Sbjct: 207 AMPN 201

[Close]
BLAST of Lsi09G011450 vs. NCBI nr
Match: gi|659114818|ref|XP_008457245.1| (PREDICTED: ubiquitin-conjugating enzyme E2 D1-like [Cucumis melo])

HSP 1 Score: 261.2 bits (666), Expect = 2.2e-66
Identity = 122/157 (77.71%), Postives = 135/157 (85.99%), Query Frame = 1 

Query: 129 ISGN--EKKTSAMYRIENELRVMNDEAASHCSFGPVGGDIFRWEGVVIGPACSCYEGGIF 188
           I GN  EK + AMYRIENEL+ MN E A+HCSFGPVG DIFRWEG+VIGPACSCYEGGIF
Sbjct: 47  IRGNNEEKSSVAMYRIENELKAMNKEVATHCSFGPVGDDIFRWEGIVIGPACSCYEGGIF 106

Query: 189 HLSIQFPSDYPLYPPYVKFLTKIFHPNVGLDGSIYLDILNENWSSVLTIEKVLISICSVL 248
           H+SIQFPSDYP  PP + FLTKIFHPNV LDGSI +DIL ENWSS LTIEK+L+SICSVL
Sbjct: 107 HVSIQFPSDYPFTPPSIHFLTKIFHPNVELDGSIKIDILYENWSSALTIEKLLLSICSVL 166

Query: 249 SNPIPPTSINEASRMYLNNWLNFNGIAREWTKIYAMP 284
           SNPIP  S NEAS M+LN+WLNFN IAR+WTK+YAMP
Sbjct: 167 SNPIPQGSTNEASTMFLNDWLNFNDIARQWTKLYAMP 203

[Close]
BLAST of Lsi09G011450 vs. NCBI nr
Match: gi|919038174|ref|XP_013402556.1| (PREDICTED: ubiquitin-conjugating enzyme E2-17 kDa-like [Lingula anatina])

HSP 1 Score: 164.1 bits (414), Expect = 3.6e-37
Identity = 76/146 (52.05%), Postives = 99/146 (67.81%), Query Frame = 1 

Query: 138 AMYRIENELRVMNDEAASHCSFGPVGGDIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYP 197
           AM RI  EL+ +  +  + CS GPVG D+F W+  ++GP+ S Y GG+F LSI FP+DYP
Sbjct: 2   AMKRINKELQDLGRDPPAQCSAGPVGDDLFHWQATILGPSESAYSGGVFFLSIHFPTDYP 61

Query: 198 LYPPYVKFLTKIFHPNVGLDGSIYLDILNENWSSVLTIEKVLISICSVLSNPIPPTS-IN 257
             PP V F TKI+HPN+  +GSI LDIL   WS  LTI KVL+SICS+L++P P    + 
Sbjct: 62  FKPPKVAFTTKIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLTDPNPDDPLVP 121

Query: 258 EASRMYLNNWLNFNGIAREWTKIYAM 283
           E +R+Y  N   +N +AREWTK YAM
Sbjct: 122 EIARLYKTNRTKYNDLAREWTKKYAM 147

[Close]
BLAST of Lsi09G011450 vs. NCBI nr
Match: gi|720057628|ref|XP_010274032.1| (PREDICTED: ubiquitin-conjugating enzyme E2 D1-like isoform X2 [Nelumbo nucifera])

HSP 1 Score: 162.2 bits (409), Expect = 1.4e-36
Identity = 74/142 (52.11%), Postives = 97/142 (68.31%), Query Frame = 1 

Query: 141 RIENELRVMNDEAASHCSFGPVGGDIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYPLYP 200
           R+  EL     +  SHCS GPVG DIF W+GV++GP C+ YEGG+F LSI  P DYP  P
Sbjct: 61  RLLKELDATKKDPLSHCSCGPVGNDIFEWQGVIMGPECTPYEGGLFFLSIHIPEDYPNSP 120

Query: 201 PYVKFLTKIFHPNVGLDGSIYLDILNENWSSVLTIEKVLISICSVLSNPIPPTSINEASR 260
           P +KF TK+ HPN+  DG+I+LDIL + W+ VLTIE VL+SICS+L++P    S N  + 
Sbjct: 121 PEIKFKTKVIHPNIDEDGTIHLDILWDRWTPVLTIEWVLLSICSLLADPNADISFNPIAI 180

Query: 261 MYLNNWLNFNGIAREWTKIYAM 283
           +Y NN   +N   +EWT+ YAM
Sbjct: 181 LYRNNREEYNKKTKEWTRKYAM 202

[Close]
BLAST of Lsi09G011450 vs. NCBI nr
Match: gi|720057631|ref|XP_010274033.1| (PREDICTED: ubiquitin-conjugating enzyme E2 D1-like isoform X3 [Nelumbo nucifera])

HSP 1 Score: 162.2 bits (409), Expect = 1.4e-36
Identity = 74/142 (52.11%), Postives = 97/142 (68.31%), Query Frame = 1 

Query: 141 RIENELRVMNDEAASHCSFGPVGGDIFRWEGVVIGPACSCYEGGIFHLSIQFPSDYPLYP 200
           R+  EL     +  SHCS GPVG DIF W+GV++GP C+ YEGG+F LSI  P DYP  P
Sbjct: 55  RLLKELDATKKDPLSHCSCGPVGNDIFEWQGVIMGPECTPYEGGLFFLSIHIPEDYPNSP 114

Query: 201 PYVKFLTKIFHPNVGLDGSIYLDILNENWSSVLTIEKVLISICSVLSNPIPPTSINEASR 260
           P +KF TK+ HPN+  DG+I+LDIL + W+ VLTIE VL+SICS+L++P    S N  + 
Sbjct: 115 PEIKFKTKVIHPNIDEDGTIHLDILWDRWTPVLTIEWVLLSICSLLADPNADISFNPIAI 174

Query: 261 MYLNNWLNFNGIAREWTKIYAM 283
           +Y NN   +N   +EWT+ YAM
Sbjct: 175 LYRNNREEYNKKTKEWTRKYAM 196

The following BLAST results are available for this feature:
BLAST of Lsi09G011450 vs. Swiss-Prot
Match NameE-valueIdentityDescription
UBC2_CAEEL2.3e-3648.63Ubiquitin-conjugating enzyme E2 2 OS=Caenorhabditis elegans GN=let-70 PE=1 SV=1[more]
UBCD1_DROME2.3e-3648.63Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster GN=eff PE=2 SV... [more]
UB2D1_HUMAN3.1e-3646.58Ubiquitin-conjugating enzyme E2 D1 OS=Homo sapiens GN=UBE2D1 PE=1 SV=1[more]
UB2D1_MOUSE3.1e-3646.58Ubiquitin-conjugating enzyme E2 D1 OS=Mus musculus GN=Ube2d1 PE=2 SV=1[more]
UB2D1_BOVIN3.1e-3646.58Ubiquitin-conjugating enzyme E2 D1 OS=Bos taurus GN=UBE2D1 PE=2 SV=1[more]
BLAST of Lsi09G011450 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LI75_CUCSA1.2e-6669.02Uncharacterized protein OS=Cucumis sativus GN=Csa_2G138770 PE=4 SV=1[more]
B9RWH5_RICCO1.1e-3548.03Ubiquitin-conjugating enzyme E2, putative OS=Ricinus communis GN=RCOM_1019510 PE... [more]
H2VVD5_CAEJA1.8e-3544.38Uncharacterized protein OS=Caenorhabditis japonica PE=3 SV=2[more]
I3MW74_ICTTR2.4e-3549.32Uncharacterized protein OS=Ictidomys tridecemlineatus PE=3 SV=1[more]
A0A0B7B391_9EUPU2.4e-3551.03Uncharacterized protein OS=Arion vulgaris GN=ORF158627 PE=3 SV=1[more]
BLAST of Lsi09G011450 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G08690.12.8e-3547.95 ubiquitin-conjugating enzyme 11[more]
AT4G27960.28.0e-3547.26 ubiquitin conjugating enzyme 9[more]
AT5G53300.11.0e-3447.26 ubiquitin-conjugating enzyme 10[more]
AT5G56150.11.8e-3445.21 ubiquitin-conjugating enzyme 30[more]
AT5G41700.43.0e-3447.62 ubiquitin conjugating enzyme 8[more]
BLAST of Lsi09G011450 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449442475|ref|XP_004139007.1|1.7e-6669.02PREDICTED: ubiquitin-conjugating enzyme E2 5A-like [Cucumis sativus][more]
gi|659114818|ref|XP_008457245.1|2.2e-6677.71PREDICTED: ubiquitin-conjugating enzyme E2 D1-like [Cucumis melo][more]
gi|919038174|ref|XP_013402556.1|3.6e-3752.05PREDICTED: ubiquitin-conjugating enzyme E2-17 kDa-like [Lingula anatina][more]
gi|720057628|ref|XP_010274032.1|1.4e-3652.11PREDICTED: ubiquitin-conjugating enzyme E2 D1-like isoform X2 [Nelumbo nucifera][more]
gi|720057631|ref|XP_010274033.1|1.4e-3652.11PREDICTED: ubiquitin-conjugating enzyme E2 D1-like isoform X3 [Nelumbo nucifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR016135UBQ-conjugating_enzyme/RWD
IPR000608UBQ-conjugat_E2
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0048513 animal organ development
biological_process GO:0070936 protein K48-linked ubiquitination
biological_process GO:0044238 primary metabolic process
biological_process GO:0044260 cellular macromolecule metabolic process
biological_process GO:0070887 cellular response to chemical stimulus
biological_process GO:0007165 signal transduction
biological_process GO:0010033 response to organic substance
biological_process GO:0006357 regulation of transcription from RNA polymerase II promoter
biological_process GO:0042787 protein ubiquitination involved in ubiquitin-dependent protein catabolic process
biological_process GO:0044702 single organism reproductive process
biological_process GO:0070979 protein K11-linked ubiquitination
biological_process GO:0035518 histone H2A monoubiquitination
biological_process GO:0033554 cellular response to stress
biological_process GO:0003006 developmental process involved in reproduction
biological_process GO:0051865 protein autoubiquitination
biological_process GO:0008150 biological_process
biological_process GO:0000278 mitotic cell cycle
biological_process GO:0043433 negative regulation of sequence-specific DNA binding transcription factor activity
biological_process GO:1903955 positive regulation of protein targeting to mitochondrion
biological_process GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process
cellular_component GO:0000785 chromatin
cellular_component GO:0044444 cytoplasmic part
cellular_component GO:0070062 extracellular exosome
cellular_component GO:0071339 MLL1 complex
cellular_component GO:0005575 cellular_component
cellular_component GO:0035102 PRC1 complex
molecular_function GO:0003682 chromatin binding
molecular_function GO:0071535 RING-like zinc finger domain binding
molecular_function GO:0061631 ubiquitin conjugating enzyme activity
molecular_function GO:0031625 ubiquitin protein ligase binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi09G011450.1Lsi09G011450.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 141..275
score: 2.8
IPR000608Ubiquitin-conjugating enzyme E2PROFILEPS50127UBIQUITIN_CONJUGAT_2coord: 140..256
score: 31
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3DG3DSA:3.10.110.10coord: 130..282
score: 2.2
IPR016135Ubiquitin-conjugating enzyme/RWD-likeunknownSSF54495UBC-likecoord: 130..282
score: 2.96
NoneNo IPR availablePANTHERPTHR24068FAMILY NOT NAMEDcoord: 156..282
score: 8.6
NoneNo IPR availableSMARTSM00212ubc_7coord: 140..282
score: 1.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi09G011450Csa2G138770Cucumber (Chinese Long) v2culsiB090
Lsi09G011450CSPI02G09130Wild cucumber (PI 183967)cpilsiB088
Lsi09G011450Cucsa.193920Cucumber (Gy14) v1cgylsiB329
Lsi09G011450CmaCh08G010240Cucurbita maxima (Rimu)cmalsiB811
Lsi09G011450CmoCh08G009960Cucurbita moschata (Rifu)cmolsiB797
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi09G011450Silver-seed gourdcarlsiB204
Lsi09G011450Silver-seed gourdcarlsiB713
Lsi09G011450Silver-seed gourdcarlsiB876
Lsi09G011450Silver-seed gourdcarlsiB981
Lsi09G011450Cucumber (Chinese Long) v3cuclsiB101
Lsi09G011450Cucumber (Chinese Long) v3cuclsiB163
Lsi09G011450Cucumber (Chinese Long) v3cuclsiB173
Lsi09G011450Watermelon (97103) v2lsiwmbB015
Lsi09G011450Watermelon (97103) v2lsiwmbB026
Lsi09G011450Watermelon (97103) v2lsiwmbB029
Lsi09G011450Wax gourdlsiwgoB007
Lsi09G011450Wax gourdlsiwgoB043
Lsi09G011450Wax gourdlsiwgoB051
Lsi09G011450Cucurbita maxima (Rimu)cmalsiB341
Lsi09G011450Bottle gourd (USVL1VR-Ls)lsilsiB011
Lsi09G011450Bottle gourd (USVL1VR-Ls)lsilsiB017
Lsi09G011450Cucumber (Gy14) v1cgylsiB412
Lsi09G011450Cucurbita maxima (Rimu)cmalsiB225
Lsi09G011450Cucurbita maxima (Rimu)cmalsiB331
Lsi09G011450Cucurbita maxima (Rimu)cmalsiB465
Lsi09G011450Cucurbita maxima (Rimu)cmalsiB534
Lsi09G011450Cucurbita moschata (Rifu)cmolsiB213
Lsi09G011450Cucurbita moschata (Rifu)cmolsiB320
Lsi09G011450Cucurbita moschata (Rifu)cmolsiB329
Lsi09G011450Cucurbita moschata (Rifu)cmolsiB450
Lsi09G011450Cucurbita moschata (Rifu)cmolsiB518
Lsi09G011450Cucurbita moschata (Rifu)cmolsiB733
Lsi09G011450Cucurbita pepo (Zucchini)cpelsiB101
Lsi09G011450Cucurbita pepo (Zucchini)cpelsiB107
Lsi09G011450Cucurbita pepo (Zucchini)cpelsiB254
Lsi09G011450Cucurbita pepo (Zucchini)cpelsiB484
Lsi09G011450Cucurbita pepo (Zucchini)cpelsiB584
Lsi09G011450Cucurbita pepo (Zucchini)cpelsiB697
Lsi09G011450Wild cucumber (PI 183967)cpilsiB149
Lsi09G011450Wild cucumber (PI 183967)cpilsiB156
Lsi09G011450Cucumber (Chinese Long) v2culsiB157
Lsi09G011450Melon (DHL92) v3.5.1lsimeB025
Lsi09G011450Melon (DHL92) v3.5.1lsimeB029
Lsi09G011450Watermelon (Charleston Gray)lsiwcgB016
Lsi09G011450Watermelon (Charleston Gray)lsiwcgB029
Lsi09G011450Watermelon (Charleston Gray)lsiwcgB032
Lsi09G011450Watermelon (97103) v1lsiwmB017
Lsi09G011450Watermelon (97103) v1lsiwmB040
Lsi09G011450Cucumber (Gy14) v2cgyblsiB083
Lsi09G011450Cucumber (Gy14) v2cgyblsiB136
Lsi09G011450Cucumber (Gy14) v2cgyblsiB143
Lsi09G011450Melon (DHL92) v3.6.1lsimedB027
Lsi09G011450Melon (DHL92) v3.6.1lsimedB032