Lsi09G010610 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi09G010610
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr09 : 16231415 .. 16232249 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAACGGATAATAGTATTTGGTGGATGCTACGGAGATGAAGGAATGGTAGGGATACTACCAAGTGGGATATTAGGGATGGGAGGTGAACTAGCGGATGGAATAGAAGACAATGAAGGAATGTTAGGAATACTAACGGATGGGATATTAGGGATGAGAGGCGACCTAGCGGATGGAATAGAAGGCAATGAAGGAATGTTAGGAATACTAACGGATGGGATATTAGGGATGGGAGGCAAACTAGCAGATGGAATAGAAGACAATGAAGGAATGTTAGGGATACTGATGGGTGGGATATTAGGGATGGGAGGTGAACTAGCAGATGGAATATAACGCACTGAAGGAATGTTAGGGATACTGACGGGTGGGATATTAAGGATGAGAGACGAACTATCGGATGGAATAGAAGTCAATGAAGGAATGGTAGGGATACTAACAAGTGGGATATTAGGGATGGGAGGCAAACTAGCAGATGGAATAGAAGGCAATGAAGGAATGTTAGACATACTAACGGGTGGGATATTAGGGATGGGAGGCAAACTAGCGGATGGAATAGAAGGCAATGAAGGAATGTTAGGCATACTAACGGGTGGGATATTAGGGATGGGAGGCAAACTAGCGGATGGAATAGAAGGCAATGAAGGAATGTTAGGCATACTAACGGGTGGGATATTAGGGATGGGAGGCAAACTAGCGGATGGAATAGAAGGCAATGAGGGAATATTAGGGATACTAAGAGGTGGGATATTAGAGATGGGAGGCAAATTAACAGATGGAATAGAAGGTAATGAAGGAATGGTCGGGATATTAACAATGGATGGAATATTATTGGAGGAG

mRNA sequence

AGAACGGATAATAGTATTTGGTGGATGCTACGGAGATGAAGGAATGGTAGGGATACTACCAAGTGGGATATTAGGGATGGGAGGTGAACTAGCGGATGGAATAGAAGACAATGAAGGAATGTTAGGAATACTAACGGATGGGATATTAGGGATGAGAGGCGACCTAGCGGATGGAATAGAAGGCAATGAAGGAATGTTAGGAATACTAACGGATGGGATATTAGGGATGGGAGGCAAACTAGCAGATGGAATAGAAGACAATGAAGGAATGTTAGGGATACTGATGGGTGGGATATTAGGGATGGGAGGGATACTGACGGGTGGGATATTAAGGATGAGAGACGAACTATCGGATGGAATAGAAGTCAATGAAGGAATGGTAGGGATACTAACAAGTGGGATATTAGGGATGGGAGGCAAACTAGCAGATGGAATAGAAGGCAATGAAGGAATGTTAGACATACTAACGGGTGGGATATTAGGGATGGGAGGCAAACTAGCGGATGGAATAGAAGGCAATGAAGGAATGTTAGGCATACTAACGGGTGGGATATTAGGGATGGGAGGCAAACTAGCGGATGGAATAGAAGGCAATGAAGGAATGTTAGGCATACTAACGGGTGGGATATTAGGGATGGGAGGCAAACTAGCGGATGGAATAGAAGGCAATGAGGGAATATTAGGGATACTAAGAGGTGGGATATTAGAGATGGGAGGCAAATTAACAGATGGAATAGAAGGTAATGAAGGAATGGTCGGGATATTAACAATGGATGGAATATTATTGGAGGAG

Coding sequence (CDS)

ATGGTAGGGATACTACCAAGTGGGATATTAGGGATGGGAGGTGAACTAGCGGATGGAATAGAAGACAATGAAGGAATGTTAGGAATACTAACGGATGGGATATTAGGGATGAGAGGCGACCTAGCGGATGGAATAGAAGGCAATGAAGGAATGTTAGGAATACTAACGGATGGGATATTAGGGATGGGAGGCAAACTAGCAGATGGAATAGAAGACAATGAAGGAATGTTAGGGATACTGATGGGTGGGATATTAGGGATGGGAGGGATACTGACGGGTGGGATATTAAGGATGAGAGACGAACTATCGGATGGAATAGAAGTCAATGAAGGAATGGTAGGGATACTAACAAGTGGGATATTAGGGATGGGAGGCAAACTAGCAGATGGAATAGAAGGCAATGAAGGAATGTTAGACATACTAACGGGTGGGATATTAGGGATGGGAGGCAAACTAGCGGATGGAATAGAAGGCAATGAAGGAATGTTAGGCATACTAACGGGTGGGATATTAGGGATGGGAGGCAAACTAGCGGATGGAATAGAAGGCAATGAAGGAATGTTAGGCATACTAACGGGTGGGATATTAGGGATGGGAGGCAAACTAGCGGATGGAATAGAAGGCAATGAGGGAATATTAGGGATACTAAGAGGTGGGATATTAGAGATGGGAGGCAAATTAACAGATGGAATAGAAGGTAATGAAGGAATGGTCGGGATATTAACAATGGATGGAATATTATTGGAGGAG

Protein sequence

MVGILPSGILGMGGELADGIEDNEGMLGILTDGILGMRGDLADGIEGNEGMLGILTDGILGMGGKLADGIEDNEGMLGILMGGILGMGGILTGGILRMRDELSDGIEVNEGMVGILTSGILGMGGKLADGIEGNEGMLDILTGGILGMGGKLADGIEGNEGMLGILTGGILGMGGKLADGIEGNEGMLGILTGGILGMGGKLADGIEGNEGILGILRGGILEMGGKLTDGIEGNEGMVGILTMDGILLEE
Homology
[Close]
BLAST of Lsi09G010610 vs. TrEMBL
Match: A0A0H2M189_VARPD (Uncharacterized protein OS=Variovorax paradoxus GN=VPARA_43790 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 2.7e-27
Identity = 108/268 (40.30%), Postives = 163/268 (60.82%), Query Frame = 1 

Query: 3   GILPSGILG---MGGELADGIEDNEGMLGILTDG-ILG---MRGDLADGIEGNEGMLGIL 62
           G+L   +LG   +GG+L  G+   +G++G L  G +LG   + GDL  G+ G +G++G L
Sbjct: 377 GLLGGDLLGGDLLGGDLLGGVLGEDGIVGGLLGGDLLGGDLLGGDLLGGVLGEDGLVGNL 436

Query: 63  TDG-ILG---MGGKLADGIEDNEGMLGILMGGILGMGGILTGGILRMRDELSDGIEVNEG 122
             G +LG   +GG L DG+   +G++G L+GG L +GG L GG      +L DG+   +G
Sbjct: 437 LGGDLLGGDLLGGDLLDGVLGEDGLVGNLLGGDL-LGGDLLGG------DLLDGVLGEDG 496

Query: 123 MVGILTSG-ILG---MGGKLADGIEGNEGMLDILTGG-ILG---MGGKLADGIEGNEGML 182
           +VG L  G +LG   +GG L DG+ G +G++  L GG +LG   +GG L  G+ G +G++
Sbjct: 497 LVGNLLGGDLLGGDLLGGDLLDGVLGEDGLVGNLLGGDLLGGDLLGGDLLGGVLGEDGLV 556

Query: 183 GILTGG-ILG---MGGKLADGIEGNEGMLGILTGG-ILG---MGGKLADGIEGNEGILGI 240
           G L GG +LG   +GG L DG+ G +G++G L GG +LG   +GG L DG+ G +G++G 
Sbjct: 557 GNLLGGDLLGGDLLGGDLLDGVLGEDGLVGNLLGGDLLGGDLLGGDLLDGVLGEDGLVGN 616

[Close]
BLAST of Lsi09G010610 vs. TrEMBL
Match: A0A073J190_9RHOB (Uncharacterized protein OS=Sulfitobacter pseudonitzschiae GN=SUH3_19860 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 9.7e-25
Identity = 95/240 (39.58%), Postives = 142/240 (59.17%), Query Frame = 1 

Query: 11  GMGGELADGIEDNEGMLGILTDGILGMRGDLADGIEGNEGMLGILTDGILGMGGKLADGI 70
           G  G L DG+  ++G++G    G+LG  G L DG+ G++G++G    G+LG  G L DG+
Sbjct: 103 GGDGGLLDGVTGDDGIVG----GLLGGDGGLLDGVIGDDGIVG----GLLGGDGGLLDGV 162

Query: 71  EDNEGMLGILMGGILGMGGILTGGILRMRDELSDGIEVNEGMVGILTSGILGMGGKLADG 130
             ++G++G L+GG         GG+L       DG+  ++G+VG    G+LG  G L DG
Sbjct: 163 TGDDGLVGGLLGG--------DGGLL-------DGVTGDDGLVG----GLLGGDGGLLDG 222

Query: 131 IEGNEGMLDILTGGILGMGGKLADGIEGNEGMLGILTGGILGMGGKLADGIEGNEGMLGI 190
           + G++G    L GG+LG  G L DG+ G++G    L GG+LG  G L DG+ G++G    
Sbjct: 223 VIGDDG----LVGGLLGGDGGLLDGVIGDDG----LVGGLLGGDGGLLDGVTGDDG---- 282

Query: 191 LTGGILGMGGKLADGIEGNEGILGILRGGILEMGGKLTDGIEGNEGMV-GILTMDGILLE 250
           L GG+LG  G L DG+ G++G++G L GG     G L DG+ G++G+V G+L  D  LL+
Sbjct: 283 LVGGLLGGDGGLLDGVTGDDGLVGGLLGG----DGGLLDGLTGDDGLVGGLLGGDNGLLD 299

[Close]
BLAST of Lsi09G010610 vs. TrEMBL
Match: E6V570_VARPE (Uncharacterized protein OS=Variovorax paradoxus (strain EPS) GN=Varpa_5168 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 3.1e-23
Identity = 99/251 (39.44%), Postives = 146/251 (58.17%), Query Frame = 1 

Query: 5    LPSGILGMGGELADGIEDNEGMLGILTDGILGMRGDLADGIEGNEGMLGILTDGILGMGG 64
            L  G+LG  G L  G+  ++G+LG    G+LG  G L  GI G++G++G    G+LG  G
Sbjct: 1021 LVGGLLGGDGGLLGGVLGDDGLLG----GVLGGDGGLLGGILGDDGLVG----GLLGGDG 1080

Query: 65   KLADGIEDNEGMLGI-------LMGGILGMGGILTGGILRMRDELSDGIEVNEGMVGILT 124
             L  G+  ++G+LG        L+GG+LG  G+L GG+L     L  GI  ++G+VG   
Sbjct: 1081 GLLGGVLGDDGLLGGVLGGDGGLLGGLLGDDGLL-GGVLGGDGGLLGGILGDDGLVG--- 1140

Query: 125  SGILGMGGKLADGIEGNEGMLDILTGGILGMGGKLADGIEGNEGMLGILTGGILGMGGKL 184
             G+LG  G L  GI G++G    L GG+LG  G L  G+ G++G+L    GG+LG  G L
Sbjct: 1141 -GLLGGDGGLLGGILGDDG----LVGGLLGGDGGLLGGVLGDDGLL----GGVLGGDGGL 1200

Query: 185  ADGIEGNEGMLGILTGGILGMGGKLADGIEGNEGILGILRGGILEMGGKLTDGIEGNEGM 244
              G+ G++G+L    GG+LG  G L  G+ G++G+L    GG+L   G L  G+ GN+G+
Sbjct: 1201 LGGVLGDDGLL----GGVLGGDGGLLGGVLGDDGLL----GGVLGGDGGLLGGVLGNDGL 1242

Query: 245  V-GILTMDGIL 248
            V G+L  DG++
Sbjct: 1261 VGGLLGDDGLV 1242

[Close]
BLAST of Lsi09G010610 vs. TrEMBL
Match: A0A0D0MFQ7_VARPD (Membrane protein OS=Variovorax paradoxus GN=RT97_16830 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 4.1e-23
Identity = 101/255 (39.61%), Postives = 147/255 (57.65%), Query Frame = 1 

Query: 5   LPSGILGMGGELADGIEDNEGMLGILTDGILGMRGDLADGIEGNEGMLGILTDGILGMGG 64
           L  G+LG  G L  G+  ++G+LG    G+LG  G L  G+ G++G+LG    G+LG  G
Sbjct: 487 LLGGLLGGEGGLLGGVLGDDGLLG----GVLGGEGGLLGGVLGDDGLLG----GVLGGEG 546

Query: 65  KLADGIEDNEGMLGILMGGILGM-GGIL-----TGGILRMRDELSDGIEVNEGMVGILTS 124
            L   +  ++G+LG L+GG  G+ GG+L      GG+L     L  G+  ++G++G    
Sbjct: 547 GLLGSVLGDDGLLGGLLGGEGGLLGGVLGDDGLLGGVLGGEGGLLGGVLGDDGLLG---- 606

Query: 125 GILGMGGKLADGIEGNEGMLDILTGGILGMGGKLADGIEGNEGMLGILTGGILGMGGKLA 184
           G+LG  G L +G+ G++G+L    GG+LG  G L  G+ G++G+L    GG+LG  G L 
Sbjct: 607 GVLGGEGGLLEGVLGDDGLL----GGLLGGEGGLLGGVLGDDGLL----GGVLGGDGGLL 666

Query: 185 DGIEGNEGMLGIL------TGGILGMGGKLADGIEGNEGILGILRGGILEMGGKLTDGIE 244
            G+ GN+G+ G L       GG+LG  G LA G+ G+EG    L GG+L  GG L DG+ 
Sbjct: 667 GGVLGNDGLAGGLLGQDGVVGGLLGGEGALA-GVLGSEG----LSGGVLGEGG-LVDGLL 715

Query: 245 GNEGMVGILTMDGIL 248
           G +G+VG L  DG L
Sbjct: 727 GTDGVVGNLLSDGPL 715

[Close]
BLAST of Lsi09G010610 vs. TrEMBL
Match: C5CK21_VARPS (Uncharacterized protein OS=Variovorax paradoxus (strain S110) GN=Vapar_4461 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 1.0e-21
Identity = 97/255 (38.04%), Postives = 147/255 (57.65%), Query Frame = 1 

Query: 5   LPSGILGMGGELADGIEDNEGMLGILTDGILGMRGDLADGIEGNEGMLGILTDGILGMGG 64
           L  G+LG  G + + + D   + G+L D  LG        + G +G+LG +TDG+LG GG
Sbjct: 571 LSGGLLGQDGVVDNLLGDGGAVSGLLEDSPLGGL------LGGEDGLLGGVTDGVLGEGG 630

Query: 65  KLADGIEDNEGMLGILMG--GILGMGGILTGGILRMRDELSDGIEVNEGMVGILTSGILG 124
            L  G+  N+G++G L+G  G+LG GG +  G L   D L  G+   +G+V      +LG
Sbjct: 631 LLG-GVLGNDGVVGGLLGEDGLLGSGGAI--GSLLAEDGLLGGVLGEDGLV----DNLLG 690

Query: 125 MGGKLADGIEGNEGML-DILTGGILG---MGGKLADGIEGNEGMLGILTGG-ILG---MG 184
            GG L  G+ G +G++ ++L GG+LG   +GG L  G+ G +G++G L GG +LG   +G
Sbjct: 691 DGGLLG-GVLGEDGLVGNLLGGGLLGGDLLGGDLLGGVLGEDGLVGNLLGGDLLGGDLLG 750

Query: 185 GKLADGIEGNEGMLGILTGG-ILG---MGGKLADGIEGNEGILGILRGGIL----EMGGK 242
           G L  G+ G +G++  L GG +LG   +GG L  G+ G +G++G L GG L     +GG 
Sbjct: 751 GDLLGGVLGEDGLVSNLLGGDLLGGDLLGGDLLGGVLGEDGLVGNLLGGDLLGGDLLGGD 810

[Close]
BLAST of Lsi09G010610 vs. NCBI nr
Match: gi|754552906|ref|WP_041946697.1| (membrane protein [Variovorax paradoxus])

HSP 1 Score: 134.4 bits (337), Expect = 2.7e-28
Identity = 107/262 (40.84%), Postives = 160/262 (61.07%), Query Frame = 1 

Query: 3    GILPSGILG---MGGELADGIEDNEGMLGILTDG-ILG---MRGDLADGIEGNEGMLGIL 62
            G+L   +LG   +GG+L  G+   +G++G L  G +LG   + GDL  G+ G +G++G L
Sbjct: 789  GLLGGDLLGGDLLGGDLLGGVLGEDGIVGGLLGGDLLGGDLLGGDLLGGVLGEDGLVGNL 848

Query: 63   TDGILGMGGKLADGIEDNEGMLGILMGGILGMGGILTGGILRMRDELSDGIEVNEGMVGI 122
              G L +GG L DG+   +G++G L+GG L +GG L GG      +L DG+   +G+VG 
Sbjct: 849  LGGDL-LGGDLLDGVLGEDGLVGNLLGGDL-LGGDLLGG------DLLDGVLGEDGLVGN 908

Query: 123  LTSG-ILG---MGGKLADGIEGNEGMLDILTGGILGMGGKLADGIEGNEGMLGILTGG-I 182
            L  G +LG   +GG L DG+ G +G++  L GG L +GG L  G+ G +G++G L GG +
Sbjct: 909  LLGGDLLGGDLLGGDLLDGVLGEDGLVGNLLGGDL-LGGDLLGGVLGEDGLVGNLLGGDL 968

Query: 183  LG---MGGKLADGIEGNEGMLGILTGG-ILG---MGGKLADGIEGNEGILGILRGGIL-- 242
            LG   +GG L DG+ G +G++G L GG +LG   +GG L DG+ G +G++G L GG L  
Sbjct: 969  LGGDLLGGDLLDGVLGEDGLVGNLLGGDLLGGDLLGGDLLDGVLGEDGLVGNLLGGDLLG 1028

[Close]
BLAST of Lsi09G010610 vs. NCBI nr
Match: gi|827509549|gb|KLN54457.1| (hypothetical protein VPARA_43790 [Variovorax paradoxus])

HSP 1 Score: 130.6 bits (327), Expect = 3.9e-27
Identity = 108/268 (40.30%), Postives = 163/268 (60.82%), Query Frame = 1 

Query: 3   GILPSGILG---MGGELADGIEDNEGMLGILTDG-ILG---MRGDLADGIEGNEGMLGIL 62
           G+L   +LG   +GG+L  G+   +G++G L  G +LG   + GDL  G+ G +G++G L
Sbjct: 377 GLLGGDLLGGDLLGGDLLGGVLGEDGIVGGLLGGDLLGGDLLGGDLLGGVLGEDGLVGNL 436

Query: 63  TDG-ILG---MGGKLADGIEDNEGMLGILMGGILGMGGILTGGILRMRDELSDGIEVNEG 122
             G +LG   +GG L DG+   +G++G L+GG L +GG L GG      +L DG+   +G
Sbjct: 437 LGGDLLGGDLLGGDLLDGVLGEDGLVGNLLGGDL-LGGDLLGG------DLLDGVLGEDG 496

Query: 123 MVGILTSG-ILG---MGGKLADGIEGNEGMLDILTGG-ILG---MGGKLADGIEGNEGML 182
           +VG L  G +LG   +GG L DG+ G +G++  L GG +LG   +GG L  G+ G +G++
Sbjct: 497 LVGNLLGGDLLGGDLLGGDLLDGVLGEDGLVGNLLGGDLLGGDLLGGDLLGGVLGEDGLV 556

Query: 183 GILTGG-ILG---MGGKLADGIEGNEGMLGILTGG-ILG---MGGKLADGIEGNEGILGI 240
           G L GG +LG   +GG L DG+ G +G++G L GG +LG   +GG L DG+ G +G++G 
Sbjct: 557 GNLLGGDLLGGDLLGGDLLDGVLGEDGLVGNLLGGDLLGGDLLGGDLLDGVLGEDGLVGN 616

[Close]
BLAST of Lsi09G010610 vs. NCBI nr
Match: gi|836636366|ref|WP_047785978.1| (membrane protein [Variovorax paradoxus])

HSP 1 Score: 130.6 bits (327), Expect = 3.9e-27
Identity = 108/268 (40.30%), Postives = 163/268 (60.82%), Query Frame = 1 

Query: 3    GILPSGILG---MGGELADGIEDNEGMLGILTDG-ILG---MRGDLADGIEGNEGMLGIL 62
            G+L   +LG   +GG+L  G+   +G++G L  G +LG   + GDL  G+ G +G++G L
Sbjct: 779  GLLGGDLLGGDLLGGDLLGGVLGEDGIVGGLLGGDLLGGDLLGGDLLGGVLGEDGLVGNL 838

Query: 63   TDG-ILG---MGGKLADGIEDNEGMLGILMGGILGMGGILTGGILRMRDELSDGIEVNEG 122
              G +LG   +GG L DG+   +G++G L+GG L +GG L GG      +L DG+   +G
Sbjct: 839  LGGDLLGGDLLGGDLLDGVLGEDGLVGNLLGGDL-LGGDLLGG------DLLDGVLGEDG 898

Query: 123  MVGILTSG-ILG---MGGKLADGIEGNEGMLDILTGG-ILG---MGGKLADGIEGNEGML 182
            +VG L  G +LG   +GG L DG+ G +G++  L GG +LG   +GG L  G+ G +G++
Sbjct: 899  LVGNLLGGDLLGGDLLGGDLLDGVLGEDGLVGNLLGGDLLGGDLLGGDLLGGVLGEDGLV 958

Query: 183  GILTGG-ILG---MGGKLADGIEGNEGMLGILTGG-ILG---MGGKLADGIEGNEGILGI 240
            G L GG +LG   +GG L DG+ G +G++G L GG +LG   +GG L DG+ G +G++G 
Sbjct: 959  GNLLGGDLLGGDLLGGDLLDGVLGEDGLVGNLLGGDLLGGDLLGGDLLDGVLGEDGLVGN 1018

[Close]
BLAST of Lsi09G010610 vs. NCBI nr
Match: gi|917087590|ref|WP_051694302.1| (hypothetical protein [Sulfitobacter pseudonitzschiae])

HSP 1 Score: 122.1 bits (305), Expect = 1.4e-24
Identity = 95/240 (39.58%), Postives = 142/240 (59.17%), Query Frame = 1 

Query: 11  GMGGELADGIEDNEGMLGILTDGILGMRGDLADGIEGNEGMLGILTDGILGMGGKLADGI 70
           G  G L DG+  ++G++G    G+LG  G L DG+ G++G++G    G+LG  G L DG+
Sbjct: 103 GGDGGLLDGVTGDDGIVG----GLLGGDGGLLDGVIGDDGIVG----GLLGGDGGLLDGV 162

Query: 71  EDNEGMLGILMGGILGMGGILTGGILRMRDELSDGIEVNEGMVGILTSGILGMGGKLADG 130
             ++G++G L+GG         GG+L       DG+  ++G+VG    G+LG  G L DG
Sbjct: 163 TGDDGLVGGLLGG--------DGGLL-------DGVTGDDGLVG----GLLGGDGGLLDG 222

Query: 131 IEGNEGMLDILTGGILGMGGKLADGIEGNEGMLGILTGGILGMGGKLADGIEGNEGMLGI 190
           + G++G    L GG+LG  G L DG+ G++G    L GG+LG  G L DG+ G++G    
Sbjct: 223 VIGDDG----LVGGLLGGDGGLLDGVIGDDG----LVGGLLGGDGGLLDGVTGDDG---- 282

Query: 191 LTGGILGMGGKLADGIEGNEGILGILRGGILEMGGKLTDGIEGNEGMV-GILTMDGILLE 250
           L GG+LG  G L DG+ G++G++G L GG     G L DG+ G++G+V G+L  D  LL+
Sbjct: 283 LVGGLLGGDGGLLDGVTGDDGLVGGLLGG----DGGLLDGLTGDDGLVGGLLGGDNGLLD 299

[Close]
BLAST of Lsi09G010610 vs. NCBI nr
Match: gi|1011468192|ref|WP_062364500.1| (hypothetical protein, partial [Variovorax paradoxus])

HSP 1 Score: 119.4 bits (298), Expect = 9.0e-24
Identity = 104/279 (37.28%), Postives = 161/279 (57.71%), Query Frame = 1 

Query: 1   MVGILPSGILGMGGELADGIEDNEGMLGILT--DGILG------------MRGDLADGIE 60
           ++G L  G+LG  G L  G+   +G++G L   DG+LG            + GDL  G+ 
Sbjct: 378 LLGGLTDGLLGDDG-LLGGLLGEDGVVGGLLSGDGVLGNVLGGDLLGGDLLGGDLLGGVL 437

Query: 61  GNEGMLGILTDG-ILG---MGGKLADGIEDNEGMLGILMGGILGMGGILTGGILRMRDEL 120
           G +G++G L  G +LG   +GG L  G+   +G++G L+GG L +GG L GG      +L
Sbjct: 438 GEDGLVGNLLGGDLLGGDLLGGDLLGGVLGEDGLVGNLLGGDL-LGGDLLGG------DL 497

Query: 121 SDGIEVNEGMVGILTSG-ILG---MGGKLADGIEGNEGML-DILTGGILG---MGGKLAD 180
             G+   +G+VG L  G +LG   +GG L DG+ G +G++ ++L G +LG   +GG L D
Sbjct: 498 LGGVLGEDGLVGNLIGGDLLGGDLLGGDLLDGVLGEDGLVGNVLGGDLLGGDLLGGDLLD 557

Query: 181 GIEGNEGMLG-ILTGGILG---MGGKLADGIEGNEGMLGILTGGIL----GMGGKLADGI 240
           G+ G +G++G +L G +LG   +GG L DG+ G +G++G + GG L     +GG L +G+
Sbjct: 558 GVLGEDGLVGNVLGGDLLGGDLLGGDLLDGVLGEDGLVGNVLGGDLLSGDVLGGDLLNGV 617

Query: 241 EGNEGILGILRGGILE----MGGKLTDGIEGNEGMVGIL 242
            G +G++G + GG L     +GG L DG+ G  G+VG L
Sbjct: 618 LGEDGLVGNVLGGDLPGGDLLGGDLLDGVLGENGLVGNL 648

The following BLAST results are available for this feature:
BLAST of Lsi09G010610 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Lsi09G010610 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0H2M189_VARPD2.7e-2740.30Uncharacterized protein OS=Variovorax paradoxus GN=VPARA_43790 PE=4 SV=1[more]
A0A073J190_9RHOB9.7e-2539.58Uncharacterized protein OS=Sulfitobacter pseudonitzschiae GN=SUH3_19860 PE=4 SV=... [more]
E6V570_VARPE3.1e-2339.44Uncharacterized protein OS=Variovorax paradoxus (strain EPS) GN=Varpa_5168 PE=4 ... [more]
A0A0D0MFQ7_VARPD4.1e-2339.61Membrane protein OS=Variovorax paradoxus GN=RT97_16830 PE=4 SV=1[more]
C5CK21_VARPS1.0e-2138.04Uncharacterized protein OS=Variovorax paradoxus (strain S110) GN=Vapar_4461 PE=4... [more]
BLAST of Lsi09G010610 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Lsi09G010610 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|754552906|ref|WP_041946697.1|2.7e-2840.84membrane protein [Variovorax paradoxus][more]
gi|827509549|gb|KLN54457.1|3.9e-2740.30hypothetical protein VPARA_43790 [Variovorax paradoxus][more]
gi|836636366|ref|WP_047785978.1|3.9e-2740.30membrane protein [Variovorax paradoxus][more]
gi|917087590|ref|WP_051694302.1|1.4e-2439.58hypothetical protein [Sulfitobacter pseudonitzschiae][more]
gi|1011468192|ref|WP_062364500.1|9.0e-2437.28hypothetical protein, partial [Variovorax paradoxus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi09G010610.1Lsi09G010610.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi09G010610Cucurbita maxima (Rimu)cmalsiB264
Lsi09G010610Cucurbita maxima (Rimu)cmalsiB265
Lsi09G010610Cucurbita maxima (Rimu)cmalsiB628
Lsi09G010610Cucurbita moschata (Rifu)cmolsiB251
Lsi09G010610Cucurbita moschata (Rifu)cmolsiB252
Lsi09G010610Cucurbita moschata (Rifu)cmolsiB616
Lsi09G010610Cucurbita pepo (Zucchini)cpelsiB132
Lsi09G010610Cucurbita pepo (Zucchini)cpelsiB136
Lsi09G010610Cucurbita pepo (Zucchini)cpelsiB316
Lsi09G010610Melon (DHL92) v3.5.1lsimeB023
Lsi09G010610Watermelon (Charleston Gray)lsiwcgB029
Lsi09G010610Watermelon (Charleston Gray)lsiwcgB031
Lsi09G010610Watermelon (97103) v1lsiwmB040
Lsi09G010610Melon (DHL92) v3.6.1lsimedB025
Lsi09G010610Silver-seed gourdcarlsiB479
Lsi09G010610Silver-seed gourdcarlsiB677
Lsi09G010610Silver-seed gourdcarlsiB755
Lsi09G010610Watermelon (97103) v2lsiwmbB026
Lsi09G010610Wax gourdlsiwgoB007
Lsi09G010610Wax gourdlsiwgoB035