Lsi09G010560 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAATGGGAGGGAGGGTTGTACGGTAGATTAGTGGTGTTATGAATTAGTTAGTTGGCAAATGGTAGAAGTAGTAAAAGAGGTGGAGGCACGAAGACCTCATCGCATGTGCCACATTTACACGTGTAAAAACAATTGGATTATTATATAGCATAAGCAATGATGTAAGTAGTGGTTTTGGAGTCCATAAATACATGGTCTGTCTGATCTGAGTATCATTATTTTGGGTTTGAAAGGAAAAGAAAAAAATTGAAGATAATGAATGAGAGAGTATTGTGGGATGCTTTGCCCACAATTCTCATGGTTTTAGTTCAGTTTGGGTTTGCTGGAGTTAACATTTGCTACAAATTAGCTGCTGCTGATGGAATGAGTTTGAGGATTATTATTGCTTATCGTTTCTTATTTGCCTCTGCTTTCATTCTTCCTATTGCCTTCTTTCTCGAAAGGTAAATTTATTTTTCTTTTTTACTCGTAAGTAGTCTAGCTAAGTAGCACCTAAGTATTAATTAATTTAATTAAATTATTTGCAGAGGTAGAAGGCCGAAGCTTACTTGGTCGGTTCTTTTCTATGCTTTTCTATCTGGACTCTTTGGGTAACCAATAATTTCATTATTCCTTATATATTTTTACTTATTTAATGTTGAATTTGTAAATTATTACATACCCAAACACATTTTGGTTTAACTACATTCACCTGTGGATATGGAATTGTGAACAGTTGGCCTTCAAAATTAATAGCATTACCATAATTATGCCTACATCTTTTCCTACCACCTCATCACAACTTCTTGTGATTTTCTACCAATATTCCGCCCTCTCAAATAAATTATGTGCTCTTTTTTGAAATAAAATTAAAACAAATTAAAACTATCCTTACCACTTCGTGTTGAGCATAACTTAGTAAATAAGACACTTATTATGAACTCGAAGTTGATGCTTTCATCTTTCACTTTTCCAAATTCTCAACTAGAAGAATTTAAACTTTATCTCTTCGACTCCTATCGATTCTAACAACCTGGTTCATTTTTTAGATTATAATAATGAAAAAGTAAGGTGTCTATAAGTATTTTTGCTTTTTTTTTTTTTTTGAAATTTTAAATTAAAAATATAAATATTTACTTGAAAATAGATTTTTAATATATAATATTGATTTTTTTTTTAATGTTATACCTATTTTTCAATATCTATTACAACAATTTCCAGTAAAAAAGTGTGATGAAATAGTACTTTTATTCATGTTTTGAAAAACCCTATGTGCAAAAACAGGAAAATTAGGCTCCTTTCGGTAAACATTTGGTTTTTAGTTTTTGAAAATTAAATCTGTTTGTTTTCAATTTCTTACACTAATTTTTGCATCTTTATTAAGTAAATAAGTTGAGTTCTTAGCCAAACTTTTTTTAAAAAAAAAAATTTAAAAACCACTCTTTTGTTTAGTTTTCAAAATTTCACTTGATTTTTAAAAACATTGATAAAAAATAGATAACAAAACAAGAAATTTAGAGGCGGGAGAGAAATTTAGAGGCGGGAGAGATATTTATAGACTTAATTTTTATAAACTAAAAACAAAAAACCAATTACCAGACAAAGCCTTAATTTTATTTTTTTCAATTTTTTTCACAATATTTTAGTAAGGTTATGAAAAATGAGAAATAAGAAATAGGTAAGCTTCTTTAGTATAATAGGTGCGAGAGATTCCTAGTTTATCAGCTAAGGTTGATAATTTGTAACACATTGCAAAAAAGAAAAAGAAAAAGAAAAAGAATTAATAATTATATAAATACTTGCATGCCGCAGGGGATCACTGAGCCAAAATTTGTACGTGGAGAGCTTGGCTTTGACATCTGCAACATTTGCTTCAGCCATTGGTAACCTTGTTCCAGGCATCACCTTCATTTTGGCAGTCTCCTTCAGGTTTAATTTCAATTAATAATATATCAAAAGGAGTTAATAATATACCTTTATTATTAATAGATTACCAAAAAAAGAAAAAAAAAAGGATTATTTAAATGAATATTGATGCATGAGTCAGGCTGGAGAGGGTGAACATAAGAACAATGGGAGGGAAGGCTAAAGTGATGGGAACATTAATAGGAATAGGTGGGGCCATGGTCCTCACATTCTACAAAGGCGTGGAGCTTCATCCTTGGTCAACCCAGGTTGACCTTTTGTATAAAAGTCATCACTCCACTGGACACGTGGCGGCACCAGAACACAACATCCATAGTCAGGTGTTTGGGAGTGTGCTGGGTGTTGGAAGCTGCTTGTTCTATGCTTTATGGCTCATTGTGCAGGTGACTTCCCATCTTCCTCTCACGTGCAATGCTAAATTAGATTTTTTTTATTTTTTTTTATTTTTTTATAAACAAAGAATTAATTGATATATATATATAGGCAAAAATGAGTGAATGCTATCCATGCCACTACTCAAGTACAGCATTAATGTGTATGATGGGATCAGTTCAAGCGGTTGGTTTTGCTTTGTGTGTCGAAACGCAATGGACTCGCTGGAAATTGGGTTGGAATATCAGGCTTTTCTCTGTCGCATATACCGTATACTTTTCATTCTCTCTCCTTCTTCTCATACTTTTGTCGCATCCTAATATTATTATAATAATATTATTATAACACTAATATTTAAATGTAGTCTAGACTATATCTATTTCGATGCATCTATTCAGTCATAAAAGAAATAAATATGTTAAAAATAAAAATTTTTTTTAAAAAAAATTGCTTCATGGCAACTTGTAACTTTGCTTGGATAGACTATATAAAAATGGGTGTAGCTCAGGATGCACCCAAATATATTATTCTTTTTAATATAATATGGTCTCCTCGCTTAACTTTCATACTTTTAAAGTCTCTCTCACATTCTAAAGTTTTTTTTTATTACTTTTATCAACTTTAATACTTGGGTTTAAATACTATTTTAATTATTATATTTTTCAATTACGTACCTTGAGAATATTCATTTTAGTTGTATTTTTAAAAAGGTAGTTGTAATGAGTAGTAATTTTAGAGATAATAATCAAGTGTATACCAACATTTTAAAAACATTGCAAATATAGCAAAATCTATCGCTGATAGACTCTTATGGTCTTAAGTGGTATCACTAATAGACTTTGCTATATTTGCAATGTTTTTAAAATGTTGTTATATATGCTAATGCTTTGAATTTGATTGTTATATTTGCCACTGTCATTTTTTAAAAAATAACTATTGATATTGTATCATAAAAATGAAAATATAGCAACTAAAATAAACATTTTAAAAGTATATATATACACTAAAATAATCAACATAATATTTAAACCTTACGATCTCAAGATGTGCCCGTTTTTATACTTTCCATTCCATTACTCACACCAAAAAAATAATAAAAATATTTTAAAAAATAAATAAAAATAGTATGTCATATGTCACATTATAATATGACGATTTGGTGGGATGCGCTCTTCGGAATGCACCTAAGAATTTTTCTTTTAGGAAGTAGAACAGTATATTAAACGTATGTAGAATAGTATATTAAACATATTTAGAAAATTAAAAGAGAAAATTATAGTAAAGTTAAATATTTGGTTTGTTTTTTTGTTTTTTTTGTTTTTTTTTTTTTTTTGTCATAATGTGATGGTTGGTTTAAATTGGTGTATGTGTAATATGTGTGGTAGGGGATGGTGGCTTCTGGAGTGATGGTAACGCTAATAACATGGTGCGTACGAATGAGAGGCCCAATGTTTGTATCAGTTTTCAGCCCTCTTGTTCTACTTCTTGTTGCCTTAGCCGCCTCCGTCTTCCTACAGGAAAAACTCTACTTAGGATGGTAA AAAAAAATGGGAGGGAGGGTTGTACGGTAGATTAGTGGTGTTATGAATTAGTTAGTTGGCAAATGGTAGAAGTAGTAAAAGAGGTGGAGGCACGAAGACCTCATCGCATGTGCCACATTTACACGTGTAAAAACAATTGGATTATTATATAGCATAAGCAATGATGTAAGTAGTGGTTTTGGAGTCCATAAATACATGGTCTGTCTGATCTGAGTATCATTATTTTGGGTTTGAAAGGAAAAGAAAAAAATTGAAGATAATGAATGAGAGAGTATTGTGGGATGCTTTGCCCACAATTCTCATGGTTTTAGTTCAGTTTGGGTTTGCTGGAGTTAACATTTGCTACAAATTAGCTGCTGCTGATGGAATGAGTTTGAGGATTATTATTGCTTATCGTTTCTTATTTGCCTCTGCTTTCATTCTTCCTATTGCCTTCTTTCTCGAAAGAGGTAGAAGGCCGAAGCTTACTTGGTCGGTTCTTTTCTATGCTTTTCTATCTGGACTCTTTGGGGGATCACTGAGCCAAAATTTGTACGTGGAGAGCTTGGCTTTGACATCTGCAACATTTGCTTCAGCCATTGGTAACCTTGTTCCAGGCATCACCTTCATTTTGGCAGTCTCCTTCAGGCTGGAGAGGGTGAACATAAGAACAATGGGAGGGAAGGCTAAAGTGATGGGAACATTAATAGGAATAGGTGGGGCCATGGTCCTCACATTCTACAAAGGCGTGGAGCTTCATCCTTGGTCAACCCAGGTTGACCTTTTGTATAAAAGTCATCACTCCACTGGACACGTGGCGGCACCAGAACACAACATCCATAGTCAGGTGTTTGGGAGTGTGCTGGGTGTTGGAAGCTGCTTGTTCTATGCTTTATGGCTCATTGTGCAGGGGATGGTGGCTTCTGGAGTGATGGTAACGCTAATAACATGGTGCGTACGAATGAGAGGCCCAATGTTTGTATCAGTTTTCAGCCCTCTTGTTCTACTTCTTGTTGCCTTAGCCGCCTCCGTCTTCCTACAGGAAAAACTCTACTTAGGATGGTAA ATGAATGAGAGAGTATTGTGGGATGCTTTGCCCACAATTCTCATGGTTTTAGTTCAGTTTGGGTTTGCTGGAGTTAACATTTGCTACAAATTAGCTGCTGCTGATGGAATGAGTTTGAGGATTATTATTGCTTATCGTTTCTTATTTGCCTCTGCTTTCATTCTTCCTATTGCCTTCTTTCTCGAAAGAGGTAGAAGGCCGAAGCTTACTTGGTCGGTTCTTTTCTATGCTTTTCTATCTGGACTCTTTGGGGGATCACTGAGCCAAAATTTGTACGTGGAGAGCTTGGCTTTGACATCTGCAACATTTGCTTCAGCCATTGGTAACCTTGTTCCAGGCATCACCTTCATTTTGGCAGTCTCCTTCAGGCTGGAGAGGGTGAACATAAGAACAATGGGAGGGAAGGCTAAAGTGATGGGAACATTAATAGGAATAGGTGGGGCCATGGTCCTCACATTCTACAAAGGCGTGGAGCTTCATCCTTGGTCAACCCAGGTTGACCTTTTGTATAAAAGTCATCACTCCACTGGACACGTGGCGGCACCAGAACACAACATCCATAGTCAGGTGTTTGGGAGTGTGCTGGGTGTTGGAAGCTGCTTGTTCTATGCTTTATGGCTCATTGTGCAGGGGATGGTGGCTTCTGGAGTGATGGTAACGCTAATAACATGGTGCGTACGAATGAGAGGCCCAATGTTTGTATCAGTTTTCAGCCCTCTTGTTCTACTTCTTGTTGCCTTAGCCGCCTCCGTCTTCCTACAGGAAAAACTCTACTTAGGATGGTAA MNERVLWDALPTILMVLVQFGFAGVNICYKLAAADGMSLRIIIAYRFLFASAFILPIAFFLERGRRPKLTWSVLFYAFLSGLFGGSLSQNLYVESLALTSATFASAIGNLVPGITFILAVSFRLERVNIRTMGGKAKVMGTLIGIGGAMVLTFYKGVELHPWSTQVDLLYKSHHSTGHVAAPEHNIHSQVFGSVLGVGSCLFYALWLIVQGMVASGVMVTLITWCVRMRGPMFVSVFSPLVLLLVALAASVFLQEKLYLGW
BLAST of Lsi09G010560 vs. Swiss-Prot
Match: WTR6_ARATH (WAT1-related protein At1g25270 OS=Arabidopsis thaliana GN=At1g25270 PE=2 SV=1) HSP 1 Score: 165.2 bits (417), Expect = 9.3e-40 Identity = 108/301 (35.88%), Postives = 163/301 (54.15%), Query Frame = 1
BLAST of Lsi09G010560 vs. Swiss-Prot
Match: WTR10_ARATH (WAT1-related protein At1g68170 OS=Arabidopsis thaliana GN=At1g68170 PE=3 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 1.9e-37 Identity = 109/299 (36.45%), Postives = 156/299 (52.17%), Query Frame = 1
BLAST of Lsi09G010560 vs. Swiss-Prot
Match: WTR2_ARATH (WAT1-related protein At1g09380 OS=Arabidopsis thaliana GN=At1g09380 PE=2 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 3.2e-32 Identity = 103/306 (33.66%), Postives = 155/306 (50.65%), Query Frame = 1
BLAST of Lsi09G010560 vs. Swiss-Prot
Match: WTR38_ARATH (WAT1-related protein At5g07050 OS=Arabidopsis thaliana GN=At5g07050 PE=2 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 1.4e-30 Identity = 79/215 (36.74%), Postives = 130/215 (60.47%), Query Frame = 1
BLAST of Lsi09G010560 vs. Swiss-Prot
Match: WTR14_ARATH (WAT1-related protein At2g39510 OS=Arabidopsis thaliana GN=At2g39510 PE=2 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 8.8e-30 Identity = 70/168 (41.67%), Postives = 110/168 (65.48%), Query Frame = 1
BLAST of Lsi09G010560 vs. TrEMBL
Match: A0A0A0LLC4_CUCSA (WAT1-related protein OS=Cucumis sativus GN=Csa_2G151030 PE=3 SV=1) HSP 1 Score: 352.4 bits (903), Expect = 4.6e-94 Identity = 181/214 (84.58%), Postives = 194/214 (90.65%), Query Frame = 1
BLAST of Lsi09G010560 vs. TrEMBL
Match: A0A061DZA8_THECC (WAT1-related protein OS=Theobroma cacao GN=TCM_006436 PE=3 SV=1) HSP 1 Score: 268.9 bits (686), Expect = 6.7e-69 Identity = 139/250 (55.60%), Postives = 189/250 (75.60%), Query Frame = 1
BLAST of Lsi09G010560 vs. TrEMBL
Match: V7BTT8_PHAVU (WAT1-related protein OS=Phaseolus vulgaris GN=PHAVU_006G210200g PE=3 SV=1) HSP 1 Score: 265.0 bits (676), Expect = 9.6e-68 Identity = 138/257 (53.70%), Postives = 181/257 (70.43%), Query Frame = 1
BLAST of Lsi09G010560 vs. TrEMBL
Match: M5XJE3_PRUPE (WAT1-related protein OS=Prunus persica GN=PRUPE_ppa023190mg PE=3 SV=1) HSP 1 Score: 255.4 bits (651), Expect = 7.6e-65 Identity = 129/206 (62.62%), Postives = 161/206 (78.16%), Query Frame = 1
BLAST of Lsi09G010560 vs. TrEMBL
Match: W9RV49_9ROSA (WAT1-related protein OS=Morus notabilis GN=L484_024170 PE=3 SV=1) HSP 1 Score: 254.2 bits (648), Expect = 1.7e-64 Identity = 127/200 (63.50%), Postives = 158/200 (79.00%), Query Frame = 1
BLAST of Lsi09G010560 vs. TAIR10
Match: AT1G25270.1 (AT1G25270.1 nodulin MtN21 /EamA-like transporter family protein) HSP 1 Score: 165.2 bits (417), Expect = 5.3e-41 Identity = 108/301 (35.88%), Postives = 163/301 (54.15%), Query Frame = 1
BLAST of Lsi09G010560 vs. TAIR10
Match: AT1G68170.1 (AT1G68170.1 nodulin MtN21 /EamA-like transporter family protein) HSP 1 Score: 157.5 bits (397), Expect = 1.1e-38 Identity = 109/299 (36.45%), Postives = 156/299 (52.17%), Query Frame = 1
BLAST of Lsi09G010560 vs. TAIR10
Match: AT1G09380.1 (AT1G09380.1 nodulin MtN21 /EamA-like transporter family protein) HSP 1 Score: 140.2 bits (352), Expect = 1.8e-33 Identity = 103/306 (33.66%), Postives = 155/306 (50.65%), Query Frame = 1
BLAST of Lsi09G010560 vs. TAIR10
Match: AT5G07050.1 (AT5G07050.1 nodulin MtN21 /EamA-like transporter family protein) HSP 1 Score: 134.8 bits (338), Expect = 7.6e-32 Identity = 79/215 (36.74%), Postives = 130/215 (60.47%), Query Frame = 1
BLAST of Lsi09G010560 vs. TAIR10
Match: AT2G39510.1 (AT2G39510.1 nodulin MtN21 /EamA-like transporter family protein) HSP 1 Score: 132.1 bits (331), Expect = 4.9e-31 Identity = 70/168 (41.67%), Postives = 110/168 (65.48%), Query Frame = 1
BLAST of Lsi09G010560 vs. NCBI nr
Match: gi|659114878|ref|XP_008457270.1| (PREDICTED: WAT1-related protein At1g25270-like [Cucumis melo]) HSP 1 Score: 389.8 bits (1000), Expect = 3.7e-105 Identity = 215/313 (68.69%), Postives = 234/313 (74.76%), Query Frame = 1
BLAST of Lsi09G010560 vs. NCBI nr
Match: gi|700206393|gb|KGN61512.1| (hypothetical protein Csa_2G151030 [Cucumis sativus]) HSP 1 Score: 352.4 bits (903), Expect = 6.6e-94 Identity = 181/214 (84.58%), Postives = 194/214 (90.65%), Query Frame = 1
BLAST of Lsi09G010560 vs. NCBI nr
Match: gi|778674135|ref|XP_004139017.2| (PREDICTED: WAT1-related protein At1g25270-like [Cucumis sativus]) HSP 1 Score: 352.4 bits (903), Expect = 6.6e-94 Identity = 181/214 (84.58%), Postives = 194/214 (90.65%), Query Frame = 1
BLAST of Lsi09G010560 vs. NCBI nr
Match: gi|590683399|ref|XP_007041590.1| (Mtn21-like protein, putative isoform 2 [Theobroma cacao]) HSP 1 Score: 268.9 bits (686), Expect = 9.6e-69 Identity = 139/250 (55.60%), Postives = 189/250 (75.60%), Query Frame = 1
BLAST of Lsi09G010560 vs. NCBI nr
Match: gi|593695911|ref|XP_007148454.1| (hypothetical protein PHAVU_006G210200g [Phaseolus vulgaris]) HSP 1 Score: 265.0 bits (676), Expect = 1.4e-67 Identity = 138/257 (53.70%), Postives = 181/257 (70.43%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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