Lsi09G010530 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi09G010530
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Unknown protein
Location	chr09 : 15965400 .. 15975634 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTGTTTATTTTTATCTCTCTCACTAATCTCTCTGTTACGATGCACTACATTCTCCCCTACATTCGCGGGTTTGACGCATACCTTGGCTAAGTTTTTACTTTTAGTAGAAATGTTTCACCTTTCTGGCAAGGTGAGACACTAGCCCACTCCAAATTAACTCTAGTAGTATTACTCACTCCCTATCTCTAACGACTCCAATTATGCAAAGTCATTCGATTAAGGTTGTATAGGTATTAGCACGCTTTGAATTGTTTCGGACTCGATTGAAGTATTTTAAATCCATTTTGACTTGTGCTTACTTTTCAACTCACACTTACTCTGAACCAGGTTTATGTCCTTGACTCTGACTTTTGTTTCTTCTTCTTAGCAACAAGGTCTTCAACTAGGCTTCATCTGCTTACTTTTCAGCTCACACTTACTCTGAACCAGGTTTATGTCCTTGACTTCTTCATTTTTTGTCAACATATCATTAAAATGCATCAAGATATATAGATAATATGTTTCAATTCTCACTCACATTGATACTCATCTGTTCCAAGTTTTGAAATTTTTTAACCAAATTACACATGTATAATGTTCTTTTTATGAGGTTTGTTTTGGGGGAGGGGGGATTTGATAATAATTAAATTCTCTAATACTCTGCAATGGACAAATCATGGATGATGAAAAACAGATTATCTAGAGAATATGAGTTGGGAGTTGAAACATTAATTGAATTTGGTTTGCATCATTGCAATGGTTCCAACTTGATTCGATGTCCATGTCTAAAATGTGGAAATCGTATATCTAAAGATGTTTCAATAGTTAGGGATCACTTGTATGTCAATGGAATTGATCAAAGTTACAAGGTATGGTTTTGGCATGGGGAAGATTTGGCCACACACAAGATATCATCGATGTGATTGGCATGTACGTATGTTACATATAGAATTTCACAACTTTAGTTAATGTGAATAGAGAAAGTACATTATATATTTGAAATAATTCGTAGGTCTTTCAAGAGCGTGAAAAAGAAGAAGCTTACTTGGAAATCAATCAAGGTATATTATTTAGTAAACAACAAAATTTAGTGAGTTTATTCAATAAATATGTCCTTATTTAAGTAGCCTATGTTTTGTATTTGATACACACATGCAGTGTCCTAAGAAATCGGGGGTGGTTGAATGTGGATACTATGTCATGCGATATATGCGTGAGATAATATTACAAAGAACCACGTCAATTCTAGATATAGTACGTATTCAAATTTGAACCGATTTAACTAGGATTTTTAGTTCATGTGGCTTATTTGTTTTCTTTGTTTATAGATGAAAGACGTACCACCAAAATACTCACGAGATGATATTGACGTAGTGCGAAGTGAGTGGGCAGAGTATGTGGGATCACACATATTCTTTGCATAGGATTTGTGCCAACATTAGTAATGGGATCATGCGGAAAACAAACTATTTTGTGGATGAATTACTCTTGTTTTGTTGCTCAATCTAGATTGGAATGCATTTTGCAAAGTACTTTTTGTGGGGTCTGTAAGAATGACTTTAGATGATATGGTCCGTAAGAATGCATTAAGTGTCTTCGTTTTTGAGGTACTGTAAGATTCTTATTTATTTGATCTATTCTATAACTTCCATTTTTTGTAAGAGTAATATTGTTATTTGCAACATGTTTTGTATTATATACTTTTTCCACTAACAATTTTATATGTTGACTTCAATTTCTTGGTTGGATAAGGTTGGTAGTGGACACTTGATATTGCCTGTGGCCTTTTGAAAATGTTTGTTAGTAAAGAGGTAAAGATGAGCGTGTTGATTTCATTCTATATTTAACATGATTTTATTGCTCCTTAGGATACACGTTTAATCTTACTCTCTTATATTTTATGATTTTCCACAGTTGGTCTTTTAAATTTTCGAGAAAGATGTTATGTGGAAGGACTACGCTCAAGTAAGAAGTTTTGAAGTTGGAGTGTCTTTGGTGTATAAGAGGTATATCATATAACTTAGAATTATATGTTATTTGAATTGGTTTATTTTGGTAAGACCTAAGTTATTTTGCTAATGATGAAAATATCTTCCAAATATTAGTTGACATTAGTTTAGTTTGGTAGACTTAATTTATTATGATATTGATTGAAATCTCTTTCAAGTAGTTATTGGTATACTTATGTTCTAAATAGTGAGACTGTTGTGCGTATTTAGATTACTTATTACATTAAATAAATCTTCCTATACCTCAAGCACATAGTTTTTCATTTGAAACCCCCCCAAACCCCACCTTTATATAGTTTTTCATTTTACTTTATTCTTTCTCCAATTTGTGGACATTTGTACTTTTTGGAAGTAGGTTCAAACATATGTTTTGAGGAAAATTGATGTTTATTGTTCGTTTTATTTTGATTTCTTTAGTTGTTATATTCTTAAAGTGGTTGGACAAGTTGTTATACTTCTTAGAGGTTGGACAAGTTTGTTAGCTTTGTAGTTTTGATAAATGAGTTAAATATGGAAGTTATTTATGTTATTAAAGTTGATTTCCAAATGTAGTCAACATAATGATATAGAGAATGTATAACCTAATTTATATTGTTATTATTGTTGATTTTGAGCCTATTTATGTAGTTATATTGTGAATATACTGTTGTTTTTGTTTTAAAGTTTGATTTGAAACTTATTTGTATTATTAAAGTGTAGTTTTGAGTGTAGGTGTGTTAAATTCTAAAATGAATATTTTGTTTACTAGGTCTTTGCACAAGTCCATTGAAGCAAGGAAACCCACCAAGCAAGTTCTTCTCATTTGTGTTGTAATTTTTTTGGAATAGTGTCAACACTTAGTTGTAATTACTGGATTTGTAAATAACTTAATCAAAGTTTGGTTACTAATTTCGTTGTATATATTTTTCTTGTATTAATGTTACAGACTCTATTATTATATAAAAGTTCATATTTATGAAACTCTATTGTGTTAAAATTGGATGAAGACAGGTGTAATAACAGGTATAAAACAAATAGTAATTAATCATTAAAAGTACTTTTTTGATATTTCATAAATGGCATGAGATGCAGTTATATGACATTGGAATAGTGTCATTAATCAGACTTTAATGACGGTAAGTAAGTATCAATGTATCTAATTCAATGACCTTTAGAAAGTGTCACAATTAAGGTATTATTGACACTGTAAATGTGACATTATTAATGTTTTGGTGACAGAATTTTAATGTCAATATAAAGATTTATTGACAATGAAAAATTGTCATAGAAAATATTAATATGACATATAATAAATGTCATTAAATGTTTATTATTGACTATATAGAAAAGTCATGAAACAACCATAGATGACTGATTTTTTATGTGTCATCTATATACTTTCCTTGATGGTGGTTTTAAAGACTAAAAAATAGTCATGAAATGTGGTAATGACAATTTTTTAGAGTCATCAAAACTTGTTTTTGTTGTAGTGATTGAAAATTAAGTATTAATAAAAGGGAGAGAGAGATCAGAATTAAGGGTAATCTTGTCTTAATATATTCTAAAAAGTTAAATAGTTGTCATTTTAGTCTATTAGTGAAATATTTATGCTTAAATATGTTATTTGGCAGAATTTCTGTTAAAAAAATTGTAAAAGAATGTGGCCCAAGTATCTTAAAAAATCAAGAGCGTCCTTTCATGAGAATTATGTACGGATGGCCTCAAAATAGAGGCCCTAATGAAAAATGGTCACCTGTCCAAAACAAGATGGAAAGTGGCCCTTTGCTGGCGTCATCCGCGTGTGAATTTCCATATACGCCTCCGATACCGTCCACGTAACTCGCTACTCGATTCCTCGGCACTCAATAGTTACTCGATACTCGATGCCAGGCTCGCGACTCGATCGACATACTTAACTCGATGATGCCACCTCATACTCGATGCTCGATGGTCCCCATACTCGATCCTTACGAACTGTTTGAATTCTTACAGCCGCATAAAATGTTTGAATTCCATTATTTCACCACTTCAACTCATTCACTCAGACTGTTTGCGCCGATTCTCTCTCATCTTCCAAGCCTACATCACGATACTACTGCACCCTCTTGTGGAAATCTCTGTCGACCATCCCTCTTTCAGGTAACACTCGTCTCTCTGTGATGGTACATCTGCTTCTTCATTTGTACGTTCCTTGATACTCGACCGCACAGTTCTCCATTGTTTTCATTTTGGTTATCATATGTTGCATGTTTGACTGGAGTTTGAACTTTTTCTTCTTCGATTTTGCATATTCGTCTATATTTCAGATTGTTTAGGGCTTAGGGTTTGAGTAGGATTAGTCTTGAGGGTGGAAAATCAAATCGAATGCAACATGTAGCATGTAGCATCGTATTGAGCAATGGACACCATGTAGAATGTAGCATGCATTGAGTAGGGAGTATCATGTATCGAGTATCGAGTATCGTGTATCGAGTATCGAGTAATTAACAGAATGCTTACTTACTGGTGTTTTTTTTTATCGTTTCCACAGTATGGCTAGACAGTTCAAGATTCTTCCAGAGGAGCGTTTCCCAGGCCAAGCGACTAGTCTGTCATCTCATATTGGGACTGCCAACAGAATAGTGAAGAAGAAGCTCACTCCCACAGTATTTGGACGCTTTGTAGATATAGATATTATCTTCAATAGCCTGTGGATCCACTACATTCTACTAAGGGAGGTTGAAGATGATAGGAAGGATGCAATAACATTCAACTTGAATGGTACGATTGTAACATTCTCCAAGGAAGAATTCCTATTGGTTACGGGATTATGGCGGTCACCTAATCCAATAGTGGTGAGGAGGGTTGAAGCACCTGGATCACTGCGTAGTAGGTACTTTAGGAATGATTTTGCTGGGGACATTCACATTGGTACCTTAGAGTCAGTGTACAAGGAAATGGAGTTTGAGAATGACTAGGGGTGTTCACGGTTCGGTTCGGTTCGGTTTGAGGTCGAAACCGAACCGAACCGAATAAAATTGAGAATGTAATATATAGAACCAAACCGAACCGTTTGTTCGGTTCGGTTTTGCGGTTTAGCCTCTTTTTTTTTATTTTTTTTATTATATTTTTTATAATTCAAGTGTTTCCTCTTTTTGTCTTGTCCATGCCAAGTGTTTTCTTTTTTTTTTTGTTTACAACTTTTTCTAAGTATAATTTTAAATTCAATTGATCAATGATTCAATGTATTTAAATTAATTTTTGCATAAATATATTTTTGACAATCAATTTTGAAATTTCAAGACACAATATAAAAATATATTTAGAATAGTACTAATGTAATTATATTTAGTAATACTAATAGTTCAACAACAAGAGTCCAAGACAACAATAAACCTAAAAATTTCAAAGTCCAATCTTAAAATACTACACCCACAGGCCACAAACAACTAAAGTCCAATCTTAAAATTATTACAACCATAAACAACTAAAGTCTAATCTTAAAATTACTACCATAGTCCATAACATAAAAGTTCCAAAGTCCAGATGACCACATTCAAAGTTTTAAGTTACATAAATTAGAACCAAACTTGTTCAAACCACCTTCTCCTTCTCGTTCATCTCATTCTCATTCTTCTCCTTCTCCTTCTTCTCCTTCTCATTTTTCTCTTTCTCGTTCTTCTCCTTGGTTTTTGCCTATAAACCTACTTTGAAGTCTATAAAAAAAATGATAAACGTCTTAACATAATAATTATATAAATAATATATTTAAAGTCTAAAAGGAATGTTTTAAAGATATATACCTTCCTCAACAATTACAATATCCTCCAAGTATCTTTGAAGATCAATGCTAATTGGTTTAGAACGTAACCAATTTTGTGCACATACAAGTGCCTCAAATGTTGTTGGAGCTAGCGAAGAACGAAAAGGATCAATTACTCTCCCACTCGTACTGAATGCAGACTCAGAAGTAACTGTGGATACTGGAATTGCCAAAAGATCATGTGCAATTTTGCTAAGAACCTTATATCTAGAAGAATGTCCTTTCCACCAATCTAAGATATCAAAGTTCTCCTCACGTTTGATACGAGGCTCCAATAAGTAAATATCAACTTCTGTATCCATAGTTTGGGTATCATCTTCATCCATTTCTTCAAAATCAAAACGAAAAACCTCTGAAGCATTACTAGTAGTAGTAGATGTAGTCATAAAGCTACTATCATCTTCAATACAACCTGAACCTGAAGATTGACTCTTACTTGCACAATTCTTAGACATGTGAGATGATGAGCTTGTACATGAAGTTGAACCATGATTAACAACTGACAAACTATATTCATTGAACAATTTTCTCAAAACATCCTCCACCTTTTTTCCTACTTCTTTTGTCCCATCCATATCAAATAACTGATTCAAACAATACATAAGAGATTTCATCTTATAACGAGGGTTCAAAATAAAAGCAACATACAAGAGGAAGTTATTTTTCTCACTTTTTCCCCAATACTTATCATACTTCTCTTGCATCTTCATTTCCATTTCACGCAAAAGCAAATTTTCAGGACCAGTGACACTAGAATATTTTCTTATGCAATTTTGAATGATGGACCGTATTAGAAGTAACATAAAGAGACCCTGAAAGCCTAATAGTTACTTCATAGAATACAGACAAGAATTTGGTAAATATTTTAGCAATTTCCCAATCTTGGGTGGTTGGTTTACTCTCCTCATTCATGTAGACTGTGTCATAGTCTTCTAACCTTTCAAATGCCTTTTCAAATTTTACAGCTGTATCAAGCATCAAATATGTAGAATTCCATCTAGTTTGAACATCAAGACACAACATACTCTTACTAGATATGTTCTCATCTTCAATACACTTCTTAAATTTAGCAAGTCTAGCAGGAGAAGACCTAACAAACCTCATAGCATTTCGAATTCGAATTAATGAATCATTCACATCTTTCAAGCCATCACAGACAATTAAATTCAATATATGTGCACAACATCTGACATGCAAGAACTCACCATTCAACACCAACCCATGTTTAAAACGCTTCTTTAGGTAAGCAATGGCGGTATCATTTGACGAAGCATTATCAACAGTTAATGTCAAAACTCGTTCAATACCCCACTCTTTCAAACATTTCTCAACCTCTTTTCCTATTGTCTCCCCTCTATGGTTCTCAATCTGAGAGAAACTAATAATTCTCTTATGTAGCTTCCAATTTCTATCAATAAAGTGTGCAGTCAAAACCATGTAATTAATATTTTGAATCGATGTCCAAGTATCAGTCGTAAGTGAGACTCTATATCCTTCATCCACAAAAATATCCCTCAATTGTTTTTTCAAGGTAGCATATATTATCAAAATATCCTTCAATTGTTTTTTCAAGGTAGCATATATTACCAAAATATCCCTAGCAATTGTAGTTCGAGAAGGAATAACAAAATTTGGTTCTATCGACATCAATGTCCCTTCCACAAACCTCCTAAATCCCTCATTCTCCACAAATTTAAATGACAACTCATCAATTATGATCATCTCAGCAATTAGTCTTCGAGCATTCTCAATAGTAAACATCTTATAATTAACTGATGCTATATTACCACCTCCACCACTCCCTTTATTCTTAAACAACAACTTAGTTTGAGTTATATCTAACTTACTGTTTTTCATTTGATACGGATTTTTTTTACAGTAATTTTCAAGATGCATTCTCATAGTTGAATTTCTATTCCTTCTTGGATGACACACATACACCATACCACAATAATTACATTTAGCATATGGATCATCATCACTATATTCAGAGCATCTAGTAAAGTGATCCCATACCATAGATGTATTTTTCCTCTTTTTTCGAGCTTGTGGTTGGAGTGTTGGACTTGATGACGCCGATGGTGGATGCATCTTAACAACATCATCATTTTCGTTCACACTAGAACAGTTGTTGCTCGTGCTCTTGCTATTACTGTTGATGCTCTTATTCGTCATGGTGTTGTGCTACTGCCTACAAAATATATAAATTTCAATGAAACTTTATCTTCAAAACTTTCAATGAAAATGAAAATGAAAGATTTTGTTACCTTGCCAGCAATATCCGATTTGAGAAGTGGGAGATTGAGACAGATTAGAGATCGATCTAACGAAGTGAGTGTGAGATTGAGAGAAATCAGGGCCAGATCTAGAGCGACGTCGAGTGTGGGCTATCGTGGGTTGCTGGGCTCGTCGGATGGACTGCCGTGGGATGGGCTAGAGCGACGTCGGATGGGCTGCCTGCTGGGTCTGGTCGCCGTCGACGATGTGGTGACTGTGAGGGGCTGGTCGCCGTCGACGATGTGGTGGTTGTGAGGGGCTTGTCGCCGTCGTAGTGCTGCTGGTCGTCCGTCGTCGCTGTCTGAGAGTGAGATTGAAGGTGGCTGGCGGCTGCGCTGCGACTGCGAGGGTGAAGCCGTGAAGGTCGTCCGTCGTCGCCGTCTGAGAGTGAGGGAGGGTAGGGTTGAGCCGCGCGAGGGATCTGGGAAGTGGGAAGTTTAGGGTTGAGCCGCGCGAGGGATCTGGGAAAATGGGAAGGATATTTTAACTTTTAACTTTTAAGTATTACCCTAAAGTAAAAAATAAAAATATAAAATAAAAATTATAAATAATAACTATATATTATAAATAAAATAATAAATATATTATTTTTTTTAAATAATCGGTTCGGTTCGGTTTTGTTGCGGTTTAGGGTTTTGAAACCGAACCGAACCACATAAAATTGGTTTAAAATTATATTAAACCGAATCGAACCGCACAATTCGGTTTCGGTTCGATTTTGTAAACGGTTCAGTTTCAGCGGTTTGAATGCCCACCCCTAAGAATGACATGGATGCTGGGAAGATGTCATTGGTCTACTACACTGAGTTGGCTATAACGGGGAGGGAGAAGACAAGGGCCAACATCGACAAGACATTATTAAGTGACATGGAAGATTTGGACTATTTTAACAGCATTGATTGGGGTAATGTGCTGTGGGAGAGGACGTTACTTGGCCTGCAAAAAGGATTGAATGGTAAGACTGAGAACTACAAGAAGAGGTCCAAGAACAACAAGAGCTATATTGTCAAGTACAACCTACCAGGATTTCCTCATGCATTCCAGGTAATATACATTCATCTTCATTTGTAGTTCCAATACATCATACTAAAGCTTTTTTTGCTGCTTTATAATAGTATACCAACTATCGCAGGTATGGGCATACGAAATCATATCTACGGTCGCCAGAAAAGTTGCGACCAAATTGAATAATAATGTTGTACCTCGATTCCTGCGGTGGGAGTGCACCTACTCATTGCCAACTAGAATAATGCAGCGAGACGTGCTTGAGTCAAGCGAGGTTAGTGTAGTACATCTCTATTTAAGTGGGTATAGGTAAAGGTCATGTTACTAACAAATAAATTTTTATTGTGTACAGACAAGGATCACACTCACCCAACTAGTTATGTCAGATAGGGAGAGGCATTATAGGGACACTAGGGTTGAGGAACGACCCGTGTATGAGCCCATTGATGCTGAGACGGGTTCATCAGATGCACACAACCAATCCAGTGACGACGAGATTGAGGAGAATCAATTACACGAGCCTGAGCTCAAGGAGCATGTGCCAGAACCCCCTGTAGATCATGATACTCACTCTCCGCATATCGAGCACGTGTCGCCTTCGCTGAGCCCATTACATCCAGAACCTACGAGGGCTCAGAAGCGTATCTCACTCCACGACATAGATCATAGAGTGTCGATGGTGGAGCATAAGCTGGATGATGTGCATTCAGATTTGAAGGGTTTAAAGTCTGATGTGATTGTGCTTCAAGCCGACGTGCAAACAGTCACCACCCTATTACGGTCCATGTGTCGGGTACGTATTCATATATTACACGATTATACTTTAAATCTATAACATTTAGTGTTTGACCAAACTTCTTTAACGATGCAGGGTCTAGGCTTGGAGTTCCCTGATCCAGAACCCATTCGTCCACCCTCCCCCGAGCCCATTCTCGAGTCCTCCACCGAGCCCGTTCCTCCACCACCCTCTACCGATCTCGTTCCTCCACCACCCTCCACCGAGCCCATTCTTGAGCCCAATTTATTTCCTCCAGTCTATCTTCCTCTTTCCCATATACCACCCATTCCTCAATTGACCATACCACATCCTGAGTCGCTTATCCGACAACCATTTAAGAGGTTGAGGATTAAGGACGAGCCCACTATGGAGGTTAGAGGGGTAAAGGCGAGCCAGCAGTGA

mRNA sequence

ATGCCTGTCTTTCAAGAGCGTGAAAAAGAAGAAGCTTACTTGGAAATCAATCAAGTTGTTGCTCGTGCTCTTGCTATTACTGTTGATGCTCTTATTCGTCATGGTGTTGTGCTACTGCCTACAAAATATATAAATTTCAATGAAACTTTATCTTCAAAACTTTCAATGAAAATGAAAATGAAAGATTTTGTTACCTTGCCAGCAATATCCGATTTGAGAAGTGGGAGATTGAGACAGATTAGAGATCGATCTAACGAAGTGAGTGTGAGATTGAGAGAAATCAGGGCCAGATCTAGAGCGACGTCGAGTGTGGGCTATCGTGGGTTGCTGGGCTCGTCGGATGGACTGCCGTGGGATGGGCTAGAGCGACGTCGGATGGGCTGCCTGCTGGGTCTGGTCGCCGTCGACGATGTGGTGACTGTGAGGGGCTGGTCGCCGTCGACGATGTGGTGGTTTGCTGCTGGTCGTCCGTCGTCGCTGTCTGAGAGTGAGATTGAAGGTGGCTGGCGGCTGCGCTGCGACTGCGAGGGTGAAGCCGTGAAGGTCGTCCGTCGTCGCCGTCTGAGAGTGAGGGAGGGTAGGGTTGAGCCGCGCGAGGGATCTGGGAAGTGGGAAACAAGGATCACACTCACCCAACTAGTTATGTCAGATAGGGAGAGGCATTATAGGGACACTAGGGTTGAGGAACGACCCGTGTATGAGCCCATTGATGCTGAGACGGGTTCATCAGATGCACACAACCAATCCAGTGACGACGAGATTGAGGAGAATCAATTACACGAGCCTGAGCTCAAGGAGCATGTGCCAGAACCCCCTGTAGATCATGATACTCACTCTCCGCATATCGAGCACGTGTCGCCTTCGCTGAGCCCATTACATCCAGAACCTACGAGGGCTCAGAAGCGTATCTCACTCCACGACATAGATCATAGAGTGTCGATGGTGGAGCATAAGCTGGATGATGTGCATTCAGATTTGAAGGGTTTAAAGTCTGATGTGATTGTGCTTCAAGCCGACGTGCAAACAGTCACCACCCTATTACGGTCCATGTGTCGGGGTCTAGGCTTGGAGTTCCCTGATCCAGAACCCATTCGTCCACCCTCCCCCGAGCCCATTCTCGAGTCCTCCACCGAGCCCGTTCCTCCACCACCCTCTACCGATCTCGTTCCTCCACCACCCTCCACCGAGCCCATTCTTGAGCCCAATTTATTTCCTCCAGTCTATCTTCCTCTTTCCCATATACCACCCATTCCTCAATTGACCATACCACATCCTGAGTCGCTTATCCGACAACCATTTAAGAGGTTGAGGATTAAGGACGAGCCCACTATGGAGGTTAGAGGGGTAAAGGCGAGCCAGCAGTGA

Coding sequence (CDS)

ATGCCTGTCTTTCAAGAGCGTGAAAAAGAAGAAGCTTACTTGGAAATCAATCAAGTTGTTGCTCGTGCTCTTGCTATTACTGTTGATGCTCTTATTCGTCATGGTGTTGTGCTACTGCCTACAAAATATATAAATTTCAATGAAACTTTATCTTCAAAACTTTCAATGAAAATGAAAATGAAAGATTTTGTTACCTTGCCAGCAATATCCGATTTGAGAAGTGGGAGATTGAGACAGATTAGAGATCGATCTAACGAAGTGAGTGTGAGATTGAGAGAAATCAGGGCCAGATCTAGAGCGACGTCGAGTGTGGGCTATCGTGGGTTGCTGGGCTCGTCGGATGGACTGCCGTGGGATGGGCTAGAGCGACGTCGGATGGGCTGCCTGCTGGGTCTGGTCGCCGTCGACGATGTGGTGACTGTGAGGGGCTGGTCGCCGTCGACGATGTGGTGGTTTGCTGCTGGTCGTCCGTCGTCGCTGTCTGAGAGTGAGATTGAAGGTGGCTGGCGGCTGCGCTGCGACTGCGAGGGTGAAGCCGTGAAGGTCGTCCGTCGTCGCCGTCTGAGAGTGAGGGAGGGTAGGGTTGAGCCGCGCGAGGGATCTGGGAAGTGGGAAACAAGGATCACACTCACCCAACTAGTTATGTCAGATAGGGAGAGGCATTATAGGGACACTAGGGTTGAGGAACGACCCGTGTATGAGCCCATTGATGCTGAGACGGGTTCATCAGATGCACACAACCAATCCAGTGACGACGAGATTGAGGAGAATCAATTACACGAGCCTGAGCTCAAGGAGCATGTGCCAGAACCCCCTGTAGATCATGATACTCACTCTCCGCATATCGAGCACGTGTCGCCTTCGCTGAGCCCATTACATCCAGAACCTACGAGGGCTCAGAAGCGTATCTCACTCCACGACATAGATCATAGAGTGTCGATGGTGGAGCATAAGCTGGATGATGTGCATTCAGATTTGAAGGGTTTAAAGTCTGATGTGATTGTGCTTCAAGCCGACGTGCAAACAGTCACCACCCTATTACGGTCCATGTGTCGGGGTCTAGGCTTGGAGTTCCCTGATCCAGAACCCATTCGTCCACCCTCCCCCGAGCCCATTCTCGAGTCCTCCACCGAGCCCGTTCCTCCACCACCCTCTACCGATCTCGTTCCTCCACCACCCTCCACCGAGCCCATTCTTGAGCCCAATTTATTTCCTCCAGTCTATCTTCCTCTTTCCCATATACCACCCATTCCTCAATTGACCATACCACATCCTGAGTCGCTTATCCGACAACCATTTAAGAGGTTGAGGATTAAGGACGAGCCCACTATGGAGGTTAGAGGGGTAAAGGCGAGCCAGCAGTGA

Protein sequence

MPVFQEREKEEAYLEINQVVARALAITVDALIRHGVVLLPTKYINFNETLSSKLSMKMKMKDFVTLPAISDLRSGRLRQIRDRSNEVSVRLREIRARSRATSSVGYRGLLGSSDGLPWDGLERRRMGCLLGLVAVDDVVTVRGWSPSTMWWFAAGRPSSLSESEIEGGWRLRCDCEGEAVKVVRRRRLRVREGRVEPREGSGKWETRITLTQLVMSDRERHYRDTRVEERPVYEPIDAETGSSDAHNQSSDDEIEENQLHEPELKEHVPEPPVDHDTHSPHIEHVSPSLSPLHPEPTRAQKRISLHDIDHRVSMVEHKLDDVHSDLKGLKSDVIVLQADVQTVTTLLRSMCRGLGLEFPDPEPIRPPSPEPILESSTEPVPPPPSTDLVPPPPSTEPILEPNLFPPVYLPLSHIPPIPQLTIPHPESLIRQPFKRLRIKDEPTMEVRGVKASQQ

Homology

[Close]

BLAST of Lsi09G010530 vs. NCBI nr
Match: gi|659074247|ref|XP_008437501.1| (PREDICTED: uncharacterized protein LOC103482899 isoform X2 [Cucumis melo])

HSP 1 Score: 62.8 bits (151), Expect = 1.8e-06
Identity = 62/216 (28.70%), Postives = 93/216 (43.06%), Query Frame = 1


Query: 206 TRITLTQ-LVMSDRERHYRDTRVEERPVYEPIDAET------------GSSDAHNQSSDD 265
           TRI ++  LVMSD E+ +RDT+V+ERPVY    AE             G  DA  Q  D 
Sbjct: 370 TRIVISPALVMSDAEKQFRDTQVDERPVYVADQAERAPSVIDISEESDGPKDAQGQFDDH 429

Query: 266 EIEENQLHEPELKEHVPEPPVDH---DTHSPHIEH---------VSPSLSPLHPEPTRAQ 325
           ++    +  P  K H+  P   H   D   PH  H         +   +    PEP  + 
Sbjct: 430 DLHNEDISNPHYK-HLQGPHAKHERSDNCDPHDNHDIDNNSVRFMRDHVEDHLPEPEMSM 489

Query: 326 KRISL---------HDIDHRVSMVEHKLDDVHSDLKGLKSDVIVLQADVQTVTTLLRSMC 378
           KR            H++   +  ++ ++  V   LK +K       +D+QT+T+LLRS C
Sbjct: 490 KRCKREGKSREEHKHNVFSHLKSLDGRISRVEDTLKEMK-------SDLQTITSLLRSYC 549

[Close]

BLAST of Lsi09G010530 vs. NCBI nr
Match: gi|659074245|ref|XP_008437500.1| (PREDICTED: uncharacterized protein LOC103482899 isoform X1 [Cucumis melo])

HSP 1 Score: 62.8 bits (151), Expect = 1.8e-06
Identity = 62/216 (28.70%), Postives = 93/216 (43.06%), Query Frame = 1


Query: 206 TRITLTQ-LVMSDRERHYRDTRVEERPVYEPIDAET------------GSSDAHNQSSDD 265
           TRI ++  LVMSD E+ +RDT+V+ERPVY    AE             G  DA  Q  D 
Sbjct: 372 TRIVISPALVMSDAEKQFRDTQVDERPVYVADQAERAPSVIDISEESDGPKDAQGQFDDH 431

Query: 266 EIEENQLHEPELKEHVPEPPVDH---DTHSPHIEH---------VSPSLSPLHPEPTRAQ 325
           ++    +  P  K H+  P   H   D   PH  H         +   +    PEP  + 
Sbjct: 432 DLHNEDISNPHYK-HLQGPHAKHERSDNCDPHDNHDIDNNSVRFMRDHVEDHLPEPEMSM 491

Query: 326 KRISL---------HDIDHRVSMVEHKLDDVHSDLKGLKSDVIVLQADVQTVTTLLRSMC 378
           KR            H++   +  ++ ++  V   LK +K       +D+QT+T+LLRS C
Sbjct: 492 KRCKREGKSREEHKHNVFSHLKSLDGRISRVEDTLKEMK-------SDLQTITSLLRSYC 551

The following BLAST results are available for this feature:

BLAST of Lsi09G010530 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi09G010530 vs. TrEMBL


Match Name	E-value	Identity	Description

BLAST of Lsi09G010530 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Lsi09G010530 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659074247\|ref\|XP_008437501.1\|	1.8e-06	28.70	PREDICTED: uncharacterized protein LOC103482899 isoform X2 [Cucumis melo]	[more]
gi\|659074245\|ref\|XP_008437500.1\|	1.8e-06	28.70	PREDICTED: uncharacterized protein LOC103482899 isoform X1 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G010530.1	Lsi09G010530.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 449..454 scor

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi09G010530	Silver-seed gourd	carlsiB479
Lsi09G010530	Silver-seed gourd	carlsiB755
Lsi09G010530	Cucurbita maxima (Rimu)	cmalsiB264
Lsi09G010530	Cucurbita maxima (Rimu)	cmalsiB628
Lsi09G010530	Cucurbita moschata (Rifu)	cmolsiB251
Lsi09G010530	Cucurbita moschata (Rifu)	cmolsiB616
Lsi09G010530	Cucurbita pepo (Zucchini)	cpelsiB136
Lsi09G010530	Cucurbita pepo (Zucchini)	cpelsiB316