Lsi09G010140 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi09G010140
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionXyloglucan endotransglucosylase/hydrolase
Locationchr09 : 13898272 .. 13904144 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAAGTGAGGTCATGAAATGTTCAGAATGTTAATGATACTAGTGACAGTAATGTATTATTATAATCAAAATTACAAGTTTTAATATATATATATATATATATATATATAATTTGATGTTAACGATTGTTGTTGATCATGCCTATTAAATATTTTGTATGGCTTCTTAAAAAAAAAAAAAATTAGAAAATTTTCACAGATAGAAAAAATGTCAAACTATTTACAGAAAATAGAAAAAAAAATGTGGACATTGATAAACTTCTATCAGTATTTATTAGTGATATACTTCTATCATTTCTATCACTTATAAATCCTGATAGACGTTTATCATAACTATCTAAAAATTTTGCTATTGTGTAAATAGTTTCCCTTATTTTTCTATTTTTAAAAATTCTCCAAAATAATTAGTATGGTAGAATACTTCTTATTTGATAAATATTCTAAAAATTGATAATATTTTCGTCAATTTCTCTTATAATTAGAGATCAAAGTGTGCTTTACTTCAGCACTAATCAAAATGATATGGAAATTTAAGAACTACCAATCAAAATAAACAAATATAAGTAATTAATTTTAAGAACAAAAATTACAAATAATTTCAAGTAATAAAATATAATAACAAATTAATTGCAGAATTAAATAGAAGAGGGATAGAGAAATTGACACCAGAAATTTTATAGTGGTTCGGCATAACCGGCCTACATTCACTTCCTACTTCCTAAGCTCCTCTTGAGTATGTCACTCAAACTTTTGACTTTTTCCATGACTTAGAGTTGAACCGCCACAATGTTCTTTTTCCGAGTGCAAGAAAAAACTAGATCCTTTCCACGATTGAGGATCAAACTATTACAATAACTCTTTTTTCCAGGATCAAGAGAAATCCTTACAAAAGTTTAGAAAAATTAAAGAGCACACTTGTCAAACTTTCTAAAAGAGTGGATTTAAAACCTGTCATTTTTTCATTGCTCCACATGTCACTTTTTAAGTAGTTCCAATTTGATGATTTAGCCACCACGTCATCGCTATAGATATTTTTCCGTTAACCTTGTTTCAACTATATTTTCTTCATTTGAGCTCCGATTTAAAAATAAGCAACAACATCGTACATTCAAGAAGTATCTCAAAGAATCAATCAAGCTCAAGCTAATTCTATTTAAGGACCAATTTCACAAATTTCTCCCCCTTTTGAAATCAATTGAACACCCCCTCCCCCTTAAAGAGGGACAAAAACACATTTAGCAATATAATTCAACTTGAGGGTAGAAATATCAAATAAAATTTTACTCCAAAGACAATTGCTCTCCCTAAAATGATAAACAATATGCATAAGAGGGATACATAACAATAAGAGGGTGTTTGTTTCACCAACATGAGAATTACCAACTCAATGTTTGGCTCACTAACTTTAAATGTTGGTGGAGTTGAGTTGGTTTTTTTACCAACTCTCCCTCCCTCCAATGTTTTCAATGGCTCTACCCATCGACGATGAACATTACCACACTTCGATGACATACTTCGACGACTACCTTCGAATGATCAACTCCGATGACCAACTCCCAGCTCTAACAACCACCTCTGACGACAACTCCGGCGACCAATGCCGACAACCACCTTTGCATAAAGCAACTCCGACTACATACTTCGACAACCACCTTCAAGCGACCAACTCCGACGACCAACTCCAGGCTCTGGCAACCACCTCCGACGACAACTTCCACGACCACCTTCAGGTGGCTAACTCCGACGACCAACTCCAGGCTTTAGGGAGTAGAGAAAATGAGTTAAAATTAATTGAGAGTTAAAAATTGAGAGTTAGGGAGTAGAGAAAATGTTCATTTTATTGGAACATTATGTCTTTAAGGATGTGAATAAAATTTTTATGCAATTAAGTGTTCAAATTGTGTGGTGAAAATATGTTACATTTTTCAAAAAGGAAAAACAAAAAGTTCGTTCCATTTTTAAGCTTCTTTAGTATTCATGATCGAGGGTTAAGCAGTTGTGAAAAGTTTTCATTTGTTTGGAATGTGTTTGGTTGGAATGTGTTTGGTATTTAGGAATGGAAAAAAATATGTCATGTATTGAGTGTTCAAAATTGAATTCAAAATTTGTGTGGAGTATATGTTTATTTTGTAGCAATTTATTATGTCTTAAGAATGGGAAAAAACCTAAGCATTTTTTTTGTGTTAAAAATTTTAGGAAAATACGTATATAGTTGGGAACTTAAAAAAAAATAACAAAAATCAATTTTGTTTAGAAGAACTGCACCAAATTATACCCAACTCATGATTGAGGGTTGAAAAATTGCTATACAAATTTGTGTTTACTGTATGAAATTTGTTATGTTTTAAGAATGAGAAAAAATTAAGCATTTTTTAATGTTAAAATTTTTATTCCAATGGATGTACAGTTGGAAATTAAAAAGAAAAAAAATTAATACAAGAGTGTGTTTGGAATACATTTTCAAGTTGTTTTGAAAAAAATAAATTGGAGTGTTTAGCAACCACTCAAAATAGATTTTGAATTGTATTTTAAACAGTTTTTTTATTAAAAGAGTTTAAAGAAAAATGAGTTTTTTTTTTAAAAAAATATTTTTTTCTCAAGTCAATCCAAACGGGGTCCTAAATTTATTTAGAAAAACTACACTAGGTACCCAACTCAAGTCAACTCAACTCTGCACCTCAAATATAAACTTTCTGACTCAACTCAATACAACTTAGCACTACAAACATAGACATTCCAACTCAACTCAACCCAACTCTACACCCCAAACACAAATAATCTAACTCCCTAGACAATTTAACTGTTGAGACTGGTGTCTTAAATCTCTAGTTTCTTGTAGTTTGTAATTTATGTAAATACAGATTATTATTTCAATCAAATAAAAGATATATTTTATTTGATTCTTCTTGCATTAACTCAAATCCAATAAATTAAGATCCAAGGTTATTTTATGTAAACTTAAACATGTACGTGGTTGACATACAAGTGGATCATGTTTAAGTAAATAACCTAAAAGGTCTATAGTATAAAAATAAGGTTGGGTGCCTTATTCCGATAAAACTATGGAATGACCCACTTTGTAATTGTCACAATTGTTGTAAAGTGTTACGAACGATGTGATCTTGATAATTCATGTAGAGACATGTGAGTGGGGGTATCCTATACAAAGAGTTTCTATAAGATCGGACCGCAAAATGTTCAATTTCTCTTTACAACACCGTTAATTGAAGAAATTTACATTTCATAAAATGACCATAGGTGACTAGACCTTAATCTTGAGTGAGTTATACTCCTGCCTATGAGGGCAACCATTTGATTTGTATGGGTGAAGTGGTTAGATTGCTGACTTAATAAACTTACCATTTTGGAGATTTATCCAAGTAGGGAGCTGAGAACATATCTTCACAAGATGAAATTCACTCATTCCTGTCTTTAGGGTAATTAGATAATTGCTCCCTTAAGGGTTGATTCTAGGTCTTGAACAATGAGGCCTCATCCTCTCACTGGCCCGAGAGAGGTTAGTTTATAGTTGGCCTATAAACTGTTGGTTCAATAGAGGGATCAGTGGTACTTAAGGAGTTAGAAGTAACTACAGGGGTAAAATGGTAATTTGACCTAGCTATAGTTACGAGCAATTATAAAAGGTCAACTTACTGTTGATTGGTCAAATTTGTGGACATAAAAATATATCTACAGTGTGAAGAGTGCAGTTGTGGGGTTTTAATGGAGCGACTTGCCGTTGATGAATATTGATTGATTTAATTGAAGAGTTTAATTAGTTAATCTCATATCATTGGAACTTCTAATTTATAGATTCACAAGGTCCCCTTACTAGCTCATTAAGGGATTAATAAGAATTAATTTTAGTTTATTTGAATTGTTCAAATTAATTCAAAGGGAATTAATTAATTGCATTTTATTCTTTGTTTTAATCTTAGTGAGCTAGCAAAGGGATCTAATGGACCTTCATTCGGCCATACACGTCGCCTGTACATGTATTTTCCCCCATCAAGCGACTCCATCCGACTTGCCTTTAATCTAAGCCAAGTCTTTCAGCTCGACCTTGTCTTTACATAAGGCTAAGGTTATTAGCTTTCTCTCTCTTGCTCGGGTTCACTTGTCAAGATTCGTCACAACTAACCCATGGGCATTTTTCCAACATCGGGACCACTCGGACATCCATCCATCCAGAAATATCAAGGCATGAACCCTCCCGTGTCCATGCTAAATCATTTGTCGAGATAAAACGGAAAAGCGGGTGCTATATCGAACCTTCGGCCCATGGGAGAAGGCGCAATGTCGGCACACCCGTGCCATCTGACACTGTCCACGAGATCCCATTCTCAATGAAAAATGCCCGAGACTCTTGTCCAGCAACGCTCGCCCACGCCATGACACATCTGTGTCATGGGGTAGCTCGCTTAAGCCATCAGGCCCAGGGGTGGTGGAGAGTGATATCATCCCTCCCCTTATAGTACATTCTGAGCATTTTTCACCTTGGCACCCTTGCACGTGGATAATGCTACCTCGCCACAAGTTTTGTAAAGCGCCCGTCTGAACTCCGATTGACATGAAATTCGACGTGCTTCCATATTCCATCAATATGGATCTAACTCTAGAGCCGCTCGTCCAAACTCGCGACGAAACTCCTTCTTCTGAGGAAACGGCCCAGGGCCCCATCTGGCCCCCACTGAGCTTGTCACTGACACTACCAATGGCAATGATGCTTGTCTTCTTGCTTAATACTCAACCTGACATGGTTGCCCACTTATCTTGGTGTGTTGGATGATGCACCGTCCTCTTCAGTCGCATCTGACATGGTTACCCACTTATCTTGGTGTGTTGGATGATGCACCTTCCTCTTCGGTCGCATCATGGCACTTCTCTTGGCCCTCTGTCGTTGCCAGATGTGTCGACACTCCCGTGTTGCCACTTACACTTTCCGCTCCACTGCTATTGGGCTCACAATCTACTTACTTCAAGTACGATCGTGACACTATACACCCTTGTTAATTAAACTACTAAAATGATACACCATTGTTCAAATACAAATCTATTATTAATATACTCAATTATCATTATTTAAATAGGTGAAAGTTTATAAGTTCTTCGACATTATGACCAACATGCTTACAATAATTGCACTCTGTAATTCGTTATGTCAATTCTCCAAATGCAGACATCCTTTAATGTTAGGAATGATTAAGTATCTTATTGAAAATCTCAGAAAAGGTTTTATTTGGATAGAGTACCAATTAAGAGTGTACATGAACTCAGATACACCAAACTTCTTCCCCAATGAGGAGCCCATGCACCTGTTCTCAGGCATCTGGAATGCACATGATTTGGGCTACAAGGGCGGACTAGAGAAGACGAATTGGACAAAGGGGCCATTTGTATCCTCATCATATAAGAACTTATATGTAGATGGCTGTTAATGAAAAAGCCCCATATCCAAAAACTGTATAGACGACAACAACCAACTAGTGAGATAAATACGAGGCTTGGGTATCTAAAGGATTATAAAAAAGTGAACTATGCTTAGGTTCACATAAACCTTGTCATCTATGATTATTGTAAGAGAATTCTAACATGTCTTCAACCAATATCCATGAAAAAATTCAGAAATCTTAAAACAAAGTTTAAATTAAGTCCTAAACAATAAAATGTTGCTCTAACCTGGCGCAATCAGGAAGAAGATGACGGAAAAGAAGAAAAACTTTGGAAGAAAAATGAGATTGAGGAGATCACGCTTGCGAAGAAGATCGACAAAGAAGAAAAATCTTGTGAAGAAAAGGAGACGAGATCACGCTTGCGAATGGAAGAAGAAAATGAAGGAGAAAAAATAGGAATTTTGCTTTATGTTTATTAA

mRNA sequence

ATGCAAAATACACCAAACTTCTTCCCCAATGAGGAGCCCATGCACCTGTTCTCAGGCATCTGGAATGCACATGATTTGGGCTACAAGGGCGGACTAGAGAAGACGAATTGGACAAAGGGGCCATTTGTATCCTCATCATATAAGAACTTATATGAAGAAGATGACGGAAAAGAAGAAAAACTTTGGAAGAAAAATGAGATTGAGGAGATCACGCTTGCGAAGAAGATCGACAAAGAAGAAAAATCTTGTGAAGAAAAGGAGACGAGATCACGCTTGCGAATGGAAGAAGAAAATGAAGGAGAAAAAATAGGAATTTTGCTTTATGTTTATTAA

Coding sequence (CDS)

ATGCAAAATACACCAAACTTCTTCCCCAATGAGGAGCCCATGCACCTGTTCTCAGGCATCTGGAATGCACATGATTTGGGCTACAAGGGCGGACTAGAGAAGACGAATTGGACAAAGGGGCCATTTGTATCCTCATCATATAAGAACTTATATGAAGAAGATGACGGAAAAGAAGAAAAACTTTGGAAGAAAAATGAGATTGAGGAGATCACGCTTGCGAAGAAGATCGACAAAGAAGAAAAATCTTGTGAAGAAAAGGAGACGAGATCACGCTTGCGAATGGAAGAAGAAAATGAAGGAGAAAAAATAGGAATTTTGCTTTATGTTTATTAA

Protein sequence

MQNTPNFFPNEEPMHLFSGIWNAHDLGYKGGLEKTNWTKGPFVSSSYKNLYEEDDGKEEKLWKKNEIEEITLAKKIDKEEKSCEEKETRSRLRMEEENEGEKIGILLYVY
Homology
[Close]
BLAST of Lsi09G010140 vs. Swiss-Prot
Match: XTH8_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 8 OS=Arabidopsis thaliana GN=XTH8 PE=2 SV=2)

HSP 1 Score: 66.2 bits (160), Expect = 2.5e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = 1 

Query: 6   NFFPNEEPMHLFSGIWNAHDLGYKGGLEKTNWTKGPFVSSSYKNLYEE 54
           +FFPN++PM+LFS IWNA D   +GGLEKT+W K PFV SSYK+   E
Sbjct: 191 DFFPNQKPMYLFSSIWNADDWATRGGLEKTDWKKAPFV-SSYKDFAVE 237

[Close]
BLAST of Lsi09G010140 vs. Swiss-Prot
Match: XTH5_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 5 OS=Arabidopsis thaliana GN=XTH5 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.0e-07
Identity = 22/38 (57.89%), Postives = 28/38 (73.68%), Query Frame = 1 

Query: 8   FPNEEPMHLFSGIWNAHDLGYKGGLEKTNWTKGPFVSS 46
           FP  +PM ++S +WNA D   +GGLEKTNW K PFV+S
Sbjct: 182 FPFNQPMKIYSSLWNADDWATRGGLEKTNWEKAPFVAS 219

[Close]
BLAST of Lsi09G010140 vs. Swiss-Prot
Match: XTH4_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 4 OS=Arabidopsis thaliana GN=XTH4 PE=1 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.0e-07
Identity = 24/44 (54.55%), Postives = 30/44 (68.18%), Query Frame = 1 

Query: 8   FPNEEPMHLFSGIWNAHDLGYKGGLEKTNWTKGPFVSSSYKNLY 52
           FP  +PM L+S +WNA D   +GGLEKTNW   PFV +SYK  +
Sbjct: 185 FPFNQPMKLYSSLWNADDWATRGGLEKTNWANAPFV-ASYKGFH 227

[Close]
BLAST of Lsi09G010140 vs. Swiss-Prot
Match: XTH_BRAOB (Xyloglucan endotransglucosylase/hydrolase OS=Brassica oleracea var. botrytis GN=XET16A PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 4.4e-07
Identity = 21/38 (55.26%), Postives = 27/38 (71.05%), Query Frame = 1 

Query: 8   FPNEEPMHLFSGIWNAHDLGYKGGLEKTNWTKGPFVSS 46
           FP  +PM L+S +WNA D   +GGLEKTNW   PF++S
Sbjct: 184 FPFNQPMKLYSSLWNADDWATRGGLEKTNWANAPFIAS 221

[Close]
BLAST of Lsi09G010140 vs. Swiss-Prot
Match: XTH22_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 22 OS=Arabidopsis thaliana GN=XTH22 PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 7.5e-07
Identity = 22/53 (41.51%), Postives = 35/53 (66.04%), Query Frame = 1 

Query: 1   MQNTPNFFPNEEPMHLFSGIWNAHDLGYKGGLEKTNWTKGPFVSSSYKNLYEE 54
           M++    FP  +PM ++S +WNA D   +GGL KT+W+K PF ++SY+   +E
Sbjct: 166 MESLGTLFPKNKPMRMYSSLWNADDWATRGGLVKTDWSKAPF-TASYRGFQQE 217

[Close]
BLAST of Lsi09G010140 vs. TrEMBL
Match: N0DX82_CUCSA (Xyloglucan endotransglucosylase/hydrolase OS=Cucumis sativus GN=xth19 PE=3 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 5.0e-10
Identity = 32/44 (72.73%), Postives = 37/44 (84.09%), Query Frame = 1 

Query: 6   NFFPNEEPMHLFSGIWNAHDLGYKGGLEKTNWTKGPFVSSSYKN 50
           NFFPNE+PM+LFS IWNA D   +GGLEKTNWTK PFV S+YK+
Sbjct: 187 NFFPNEKPMYLFSSIWNADDWATRGGLEKTNWTKAPFV-STYKD 229

[Close]
BLAST of Lsi09G010140 vs. TrEMBL
Match: A0A059CFL8_EUCGR (Xyloglucan endotransglucosylase/hydrolase OS=Eucalyptus grandis GN=EUGRSUZ_D01294 PE=3 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.9e-09
Identity = 31/44 (70.45%), Postives = 37/44 (84.09%), Query Frame = 1 

Query: 6   NFFPNEEPMHLFSGIWNAHDLGYKGGLEKTNWTKGPFVSSSYKN 50
           NFFPNE+PM+LFS IWNA D   +GGLEKT+WTK PFV S+YK+
Sbjct: 191 NFFPNEKPMYLFSSIWNADDWATRGGLEKTDWTKAPFV-STYKD 233

[Close]
BLAST of Lsi09G010140 vs. TrEMBL
Match: K4BFF2_SOLLC (Xyloglucan endotransglucosylase/hydrolase OS=Solanum lycopersicum PE=3 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 2.5e-09
Identity = 32/46 (69.57%), Postives = 36/46 (78.26%), Query Frame = 1 

Query: 4   TPNFFPNEEPMHLFSGIWNAHDLGYKGGLEKTNWTKGPFVSSSYKN 50
           T NFFPNE+PM+LFS IWNA D   +GGLEKTNW   PFV SSYK+
Sbjct: 179 TNNFFPNEKPMYLFSSIWNADDWATRGGLEKTNWKNQPFV-SSYKD 223

[Close]
BLAST of Lsi09G010140 vs. TrEMBL
Match: M1C846_SOLTU (Xyloglucan endotransglucosylase/hydrolase OS=Solanum tuberosum GN=PGSC0003DMG400024060 PE=3 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 2.5e-09
Identity = 32/46 (69.57%), Postives = 36/46 (78.26%), Query Frame = 1 

Query: 4   TPNFFPNEEPMHLFSGIWNAHDLGYKGGLEKTNWTKGPFVSSSYKN 50
           T NFFPNE+PM+LFS IWNA D   +GGLEKTNW   PFV SSYK+
Sbjct: 179 TNNFFPNEKPMYLFSSIWNADDWATRGGLEKTNWKNQPFV-SSYKD 223

[Close]
BLAST of Lsi09G010140 vs. TrEMBL
Match: A0A0V0I501_SOLCH (Putative xyloglucan endotransglucosylase/hydrolase protein 8-like OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 2.5e-09
Identity = 32/46 (69.57%), Postives = 36/46 (78.26%), Query Frame = 1 

Query: 4   TPNFFPNEEPMHLFSGIWNAHDLGYKGGLEKTNWTKGPFVSSSYKN 50
           T NFFPNE+PM+LFS IWNA D   +GGLEKTNW   PFV SSYK+
Sbjct: 179 TNNFFPNEKPMYLFSSIWNADDWATRGGLEKTNWKNQPFV-SSYKD 223

[Close]
BLAST of Lsi09G010140 vs. TAIR10
Match: AT1G11545.1 (AT1G11545.1 xyloglucan endotransglucosylase/hydrolase 8)

HSP 1 Score: 66.2 bits (160), Expect = 1.4e-11
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = 1 

Query: 6   NFFPNEEPMHLFSGIWNAHDLGYKGGLEKTNWTKGPFVSSSYKNLYEE 54
           +FFPN++PM+LFS IWNA D   +GGLEKT+W K PFV SSYK+   E
Sbjct: 191 DFFPNQKPMYLFSSIWNADDWATRGGLEKTDWKKAPFV-SSYKDFAVE 237

[Close]
BLAST of Lsi09G010140 vs. TAIR10
Match: AT5G13870.1 (AT5G13870.1 xyloglucan endotransglucosylase/hydrolase 5)

HSP 1 Score: 56.6 bits (135), Expect = 1.1e-08
Identity = 22/38 (57.89%), Postives = 28/38 (73.68%), Query Frame = 1 

Query: 8   FPNEEPMHLFSGIWNAHDLGYKGGLEKTNWTKGPFVSS 46
           FP  +PM ++S +WNA D   +GGLEKTNW K PFV+S
Sbjct: 182 FPFNQPMKIYSSLWNADDWATRGGLEKTNWEKAPFVAS 219

[Close]
BLAST of Lsi09G010140 vs. TAIR10
Match: AT2G06850.1 (AT2G06850.1 xyloglucan endotransglucosylase/hydrolase 4)

HSP 1 Score: 56.6 bits (135), Expect = 1.1e-08
Identity = 24/44 (54.55%), Postives = 30/44 (68.18%), Query Frame = 1 

Query: 8   FPNEEPMHLFSGIWNAHDLGYKGGLEKTNWTKGPFVSSSYKNLY 52
           FP  +PM L+S +WNA D   +GGLEKTNW   PFV +SYK  +
Sbjct: 185 FPFNQPMKLYSSLWNADDWATRGGLEKTNWANAPFV-ASYKGFH 227

[Close]
BLAST of Lsi09G010140 vs. TAIR10
Match: AT5G57560.1 (AT5G57560.1 Xyloglucan endotransglucosylase/hydrolase family protein)

HSP 1 Score: 54.7 bits (130), Expect = 4.2e-08
Identity = 22/53 (41.51%), Postives = 35/53 (66.04%), Query Frame = 1 

Query: 1   MQNTPNFFPNEEPMHLFSGIWNAHDLGYKGGLEKTNWTKGPFVSSSYKNLYEE 54
           M++    FP  +PM ++S +WNA D   +GGL KT+W+K PF ++SY+   +E
Sbjct: 166 MESLGTLFPKNKPMRMYSSLWNADDWATRGGLVKTDWSKAPF-TASYRGFQQE 217

[Close]
BLAST of Lsi09G010140 vs. TAIR10
Match: AT4G25810.1 (AT4G25810.1 xyloglucan endotransglycosylase 6)

HSP 1 Score: 54.7 bits (130), Expect = 4.2e-08
Identity = 22/53 (41.51%), Postives = 35/53 (66.04%), Query Frame = 1 

Query: 1   MQNTPNFFPNEEPMHLFSGIWNAHDLGYKGGLEKTNWTKGPFVSSSYKNLYEE 54
           M++    FP  +PM ++S +WNA +   +GGL KT+W+K PF ++SY+   EE
Sbjct: 169 MESQGTLFPKNQPMRMYSSLWNAEEWATRGGLVKTDWSKAPF-TASYRGFNEE 220

[Close]
BLAST of Lsi09G010140 vs. NCBI nr
Match: gi|449471949|ref|XP_004153451.1| (PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 8 [Cucumis sativus])

HSP 1 Score: 72.0 bits (175), Expect = 7.2e-10
Identity = 32/44 (72.73%), Postives = 37/44 (84.09%), Query Frame = 1 

Query: 6   NFFPNEEPMHLFSGIWNAHDLGYKGGLEKTNWTKGPFVSSSYKN 50
           NFFPNE+PM+LFS IWNA D   +GGLEKTNWTK PFV S+YK+
Sbjct: 187 NFFPNEKPMYLFSSIWNADDWATRGGLEKTNWTKAPFV-STYKD 229

[Close]
BLAST of Lsi09G010140 vs. NCBI nr
Match: gi|659067811|ref|XP_008441409.1| (PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 8 [Cucumis melo])

HSP 1 Score: 72.0 bits (175), Expect = 7.2e-10
Identity = 32/44 (72.73%), Postives = 37/44 (84.09%), Query Frame = 1 

Query: 6   NFFPNEEPMHLFSGIWNAHDLGYKGGLEKTNWTKGPFVSSSYKN 50
           NFFPNE+PM+LFS IWNA D   +GGLEKTNWTK PFV S+YK+
Sbjct: 187 NFFPNEKPMYLFSSIWNADDWATRGGLEKTNWTKAPFV-STYKD 229

[Close]
BLAST of Lsi09G010140 vs. NCBI nr
Match: gi|702321582|ref|XP_010052819.1| (PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 8 [Eucalyptus grandis])

HSP 1 Score: 70.1 bits (170), Expect = 2.8e-09
Identity = 31/44 (70.45%), Postives = 37/44 (84.09%), Query Frame = 1 

Query: 6   NFFPNEEPMHLFSGIWNAHDLGYKGGLEKTNWTKGPFVSSSYKN 50
           NFFPNE+PM+LFS IWNA D   +GGLEKT+WTK PFV S+YK+
Sbjct: 191 NFFPNEKPMYLFSSIWNADDWATRGGLEKTDWTKAPFV-STYKD 233

[Close]
BLAST of Lsi09G010140 vs. NCBI nr
Match: gi|970013875|ref|XP_015067917.1| (PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 8 [Solanum pennellii])

HSP 1 Score: 69.7 bits (169), Expect = 3.6e-09
Identity = 32/46 (69.57%), Postives = 36/46 (78.26%), Query Frame = 1 

Query: 4   TPNFFPNEEPMHLFSGIWNAHDLGYKGGLEKTNWTKGPFVSSSYKN 50
           T NFFPNE+PM+LFS IWNA D   +GGLEKTNW   PFV SSYK+
Sbjct: 179 TNNFFPNEKPMYLFSSIWNADDWATRGGLEKTNWKNQPFV-SSYKD 223

[Close]
BLAST of Lsi09G010140 vs. NCBI nr
Match: gi|747096377|ref|XP_011096107.1| (PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 8 [Sesamum indicum])

HSP 1 Score: 69.7 bits (169), Expect = 3.6e-09
Identity = 32/46 (69.57%), Postives = 37/46 (80.43%), Query Frame = 1 

Query: 4   TPNFFPNEEPMHLFSGIWNAHDLGYKGGLEKTNWTKGPFVSSSYKN 50
           T NFFPNE+PM+LFS IWNA D   +GGLEKT+W K PFV SSYK+
Sbjct: 183 TNNFFPNEKPMYLFSSIWNADDWATRGGLEKTDWKKEPFV-SSYKD 227

The following BLAST results are available for this feature:
BLAST of Lsi09G010140 vs. Swiss-Prot
Match NameE-valueIdentityDescription
XTH8_ARATH2.5e-1062.50Probable xyloglucan endotransglucosylase/hydrolase protein 8 OS=Arabidopsis thal... [more]
XTH5_ARATH2.0e-0757.89Probable xyloglucan endotransglucosylase/hydrolase protein 5 OS=Arabidopsis thal... [more]
XTH4_ARATH2.0e-0754.55Xyloglucan endotransglucosylase/hydrolase protein 4 OS=Arabidopsis thaliana GN=X... [more]
XTH_BRAOB4.4e-0755.26Xyloglucan endotransglucosylase/hydrolase OS=Brassica oleracea var. botrytis GN=... [more]
XTH22_ARATH7.5e-0741.51Xyloglucan endotransglucosylase/hydrolase protein 22 OS=Arabidopsis thaliana GN=... [more]
BLAST of Lsi09G010140 vs. TrEMBL
Match NameE-valueIdentityDescription
N0DX82_CUCSA5.0e-1072.73Xyloglucan endotransglucosylase/hydrolase OS=Cucumis sativus GN=xth19 PE=3 SV=1[more]
A0A059CFL8_EUCGR1.9e-0970.45Xyloglucan endotransglucosylase/hydrolase OS=Eucalyptus grandis GN=EUGRSUZ_D0129... [more]
K4BFF2_SOLLC2.5e-0969.57Xyloglucan endotransglucosylase/hydrolase OS=Solanum lycopersicum PE=3 SV=1[more]
M1C846_SOLTU2.5e-0969.57Xyloglucan endotransglucosylase/hydrolase OS=Solanum tuberosum GN=PGSC0003DMG400... [more]
A0A0V0I501_SOLCH2.5e-0969.57Putative xyloglucan endotransglucosylase/hydrolase protein 8-like OS=Solanum cha... [more]
BLAST of Lsi09G010140 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G11545.11.4e-1162.50 xyloglucan endotransglucosylase/hydrolase 8[more]
AT5G13870.11.1e-0857.89 xyloglucan endotransglucosylase/hydrolase 5[more]
AT2G06850.11.1e-0854.55 xyloglucan endotransglucosylase/hydrolase 4[more]
AT5G57560.14.2e-0841.51 Xyloglucan endotransglucosylase/hydrolase family protein[more]
AT4G25810.14.2e-0841.51 xyloglucan endotransglycosylase 6[more]
BLAST of Lsi09G010140 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449471949|ref|XP_004153451.1|7.2e-1072.73PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 8 [Cucumis... [more]
gi|659067811|ref|XP_008441409.1|7.2e-1072.73PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 8 [Cucumis... [more]
gi|702321582|ref|XP_010052819.1|2.8e-0970.45PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 8 [Eucalyp... [more]
gi|970013875|ref|XP_015067917.1|3.6e-0969.57PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 8 [Solanum... [more]
gi|747096377|ref|XP_011096107.1|3.6e-0969.57PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 8 [Sesamum... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013320ConA-like_dom_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042546 cell wall biogenesis
biological_process GO:0071555 cell wall organization
biological_process GO:0010411 xyloglucan metabolic process
cellular_component GO:0048046 apoplast
cellular_component GO:0005618 cell wall
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
molecular_function GO:0016762 xyloglucan:xyloglucosyl transferase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi09G010140.1Lsi09G010140.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013320Concanavalin A-like lectin/glucanase domainGENE3DG3DSA:2.60.120.200coord: 4..70
score: 4.
NoneNo IPR availablePANTHERPTHR31062FAMILY NOT NAMEDcoord: 2..45
score: 3.0
NoneNo IPR availablePANTHERPTHR31062:SF1XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATEDcoord: 2..45
score: 3.0

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi09G010140Watermelon (97103) v2lsiwmbB027
Lsi09G010140Wax gourdlsiwgoB030
Lsi09G010140Cucurbita moschata (Rifu)cmolsiB257
Lsi09G010140Cucurbita moschata (Rifu)cmolsiB612
Lsi09G010140Cucurbita moschata (Rifu)cmolsiB618
Lsi09G010140Watermelon (Charleston Gray)lsiwcgB030