Lsi09G008280 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi09G008280
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Cytochrome b-c1 complex subunit Rieske, mitochondrial
Location	chr09 : 9501412 .. 9505480 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAATGAAAGAAAAGAAAAGAAAAAGAAAAAACCATAACGATAGCTGAAGGAAGCAAAACAAGTTTGAGGTTTATACGGGTCATGTTCCCTCTGCGAATCGGGGAAAAGGCCGCTTCTTCTTCTTCTTCTATCGCCTTCTTCTGAGTTTCTCAATATCCCTCCAAATCGAAAACCTGAAGGTTGACGAAGATGTTGAGGATTGCAGCTCGAAGGCTCTCGTCACTCTCTTCTTCGCATTTCAAGCCCACTATTGCCTCTTCTTTGCCCGGTTCTCACAACATCATTGATTCCACTGATTCCGTCCCTTCCAATGATTTCAGATCCGGCGGATTCGTCAACACTTTCCCCATCGGACCTCACTTCCATCGCAATTCTAGAGGTTACACCTTGCTTCTTTGTTTTAAAATTCCTGCTCCTTGTCGATTCATTGCGTTTTTCTTAGGGTTTGTTTTATGCCTTTTTCGCTCTTTGAGAGCGCAAAATTCTGTATCTGGCTTGCAGTTTCTATTACCGCGTTTAATCGTAGAATGGGATCGATATTCATCTTTGTTGATCCACTGTTTGATCTCTTTTGATTATTTTGAATCGTGTTTTTTTGCATATTAGTTTCTCGTTTTGTAAATAATTTTAAAATGTGAAAGTTGTTTTCTGGTGCTTTCGGGGCATTTTAACGATATCATCTTCACCGAAACAATCGCTTCTTCTTTTTTCTTTTGTAAATCTTCCACCATTTCATTTCATACTTTTAAGTTTTAACTTTATTTTGTTCTTTTATGTTATATCCACTGGAGACTACGTGATATCATTCATATGCTATATTGCCGAGAATTATTCTTCTAGTGCAGAAGTTTTAGTGTGAATTAGTCAGTGGGATCATATCTTAGTTTAATTCCATATTTTATGTGCTTAGAAATTTTTGAATTGGTTCTTTGTAAAAGCTCACCAATATCAATATGGGATGTCGATTAGCAGATCAATTTTAATTTATATTTTCTGGCTTTTTGTTGGGTATAATTTGTTGTTGCCGAAAGAGTGTAGTTGTTATCTACGAAGTTTAAGCCACTGTCTTCCCCGTGTAGAGTGTTTCTGTTATTATTGGGAAGAATTTTGATCAATTGCTGGATTTGAATATACTATCAATAAAATTTGCTAACAGTACTTATATTTTTCTCTCAGAAATAGAAATGTTTCTGATAAATTAATTTAAGATATTGGATAAGAAGGTATGAGGGGATAATTAATCCTGTTACTTGTATGAAATAATGTAGTATTAGTATAAGATAAACAAAGTAGGCTATAATTACAATAGAACTTCTTTCTTATGCACCATAAAGAAGAAGTGATTGGGGAATTCCAGATGCGTTCATTCATAAGAATTTCTGTTTTCAGTATTCTTGTAACGTGCTTCAATTAGATGGTGACACATTTCAACTTTATTTACAAACTTTGTACAATCTGTTCTTTTTTTTTATTCTTTCCTTCCTTATATTTAAAGAAGGCTCATTCACTGCACAATTGCACAGAAAATACAGAACCCTATTTCTTTTCATTTTACATTCCTTTGAAATACTGATCTTAGACACCCCAAAGAAGATGTATTTGTACGTTGTTACAAAAGAACTCAAAAGTGTAGGAGTTATCTTCGTAGACCTTTCAATTTCTTTCCTTCCAGGTTTCCTAAACCAAAGCTCGAGTCACGCATCTACACAAAAATCTAGCTTTTCCTCTGAGGCTCCACCCATTTAAGACTTACAATTTCCACTCCAAAACTGACTCTGAAGTACACAGAATGTTTTTGAATACTGAGGCAAAAGGACACTGGAGGAATAGGTGCTCTGCTTTTTCTTCTTCCCTTAAGCACAAGCTGCAAACCAATGGAGAAAGGAAGACTTGTATCTTCTTTGGGACATTAAACTTCCAAATCATATCGACCATAGGGCTTATGAGATGTTTCAGTCAACTTTATGGAAGCAGATCTTGTTGAAGAAACCCCAGATTTCTCAAGGGACCAGCAAGCTCTGTCCATACCATCGCCTAGCCTTACAGTATCAATCAATTATATCAACGGATACAGCTTTCAAATTCTCTATCCAATATCCATTATACCTCTTCTAAAACCAAGATTCCAATCACGTTCTCCAAGATTCCAATCATTGTTCTCCAAGTCCCAACACTCTTCAATGATGGCATCTTTTTTATGTGATATTATAGAAGTAAGAAATCATGGAATGATTCCTCCAAGGAAGAGGATCCCACCCATTTGTCTCTCAAAAATTTAATTCCGCCCTTTTGGCCTTGAAGTTTTTGAATTTGAAGAAAAACACTATTTATTGCAATTTGGAATCAAGGTCTGCCTTTTGATACACCTTTTGGTAGAAGTAAAGTCCACCCTAAAGGCTCACACCCGTGAATACTAAAGATAATCCTTTTGTGAAATAGCTTCAAAGTTTCTGCTAAAAAAGATTGGATAACTTTAATCCTATTCCATGGGCCCTGAAGATAGTTTTATTCATACTCACATTGAAAATCCTTAAAATTTGCTCTAGAAATTAGGCATAGCAAGAACAATTACACAATGCTTACAATTCCACAATGCTTTTTTGTTATCTTGAGAATTGGTCTTCTGCCTCTTGTGATGGTTGGTTTGTATTGCTCTTGCAAAATTGACTGCCCATTATGGCTGAACATTTTGGTTCTGGATATTTATACAGATTCCTTCTGTATGCACAACTAATTTGTAAATACTCTATGCATGCACATGACTAGTTATGGAGTTCTGCTCCCTAGGTTTGTACGAAAGTTGAGGATAGAAATATTGGTAAGAAATCAATTAGCACACTGGAAATGGTTTGGAGGCCTGCTTTTCTGATTGTGCATTTTATAAATATCTGATACTAATTGAAAAAAAAAGGCAATTATATGGTTACGGTTGGAATCTGTCTTTAACAATTACTTAAATCGTTTAGAGGCTGTGCATGAGCTTCTCAATTATAATTTGTGATTCATCACCTTATGCATGACTATTTGTTTCTGCTCTGGCGTGGTTTCATGATTATATGGAAATGACTTTCTGTTAGGTTTTGCTTCTGATGCATTGACCTCAACCAAGGATGATGGCTTAATTCTGGATATTCCTGCAACTGTAGCTGCCATTAAGAATCCTTCTTCAAAAATAGTCTATGATGACTACAATCATGAACGATTTCCTCCTGGTGACCCCAGCAAGCGTGCATTTGCTTATTTTGTATTATCAGGTGGTCGGTTTGTCTATGCTTCCTTGATTCGTCTCCTTGTTCTCAAGTTTGTCCTCAGCATGTCAGCCAGTAAGGATGTTCTTGCCCTGGCCTCACTTGAGGTTGACCTTTCAAGCATCGAACCTGGTTCTACCGTGACAGTTAAGTGGCGTGGAAAACCAGTATTCATCAGGCGACGAACTGAGGATGATATTAAGTTAGCAAATAGCGTCGACATTGGATCTCTTCGTGACCCACAGCAGGATGGCGAGAGAGTTAAGGATCCAGAATGGCTTATCGTGATCGGTGTCTGCACGCATCTTGGTTGCATTCCGTTGCCAAATGCTGGTGATTATGGTGGGTGGTTTTGTCCATGCCATGGTTCTCATTACGACGTCTCTGGCAGAATCCGTAAAGGGCCAGCACCCTACAATTTGGAGGTACCCACCTACACCTTTTTGGATGACAACAAGCTTTTGATCGGTTAAAAAACCAATCTCTTCTTTTTGAGGTAATACAGAGGTTCGAGACCCTCAATTTTTATTTAAAGCAGATAAAGTTGCAGACATGTTTTGTTTCTTTTTTTTTTTTTTACTCCTTTGAGATTTTAGAAAGCTTTATGCAGTGAGAACACTGTAACTGTAACATTGCTTGGTGCATGAATGAATCTGAATAATTTTTCTGAATAAGACAATGAGTGAAAGATAATAGATTAGAACACCATCCTATTTGAGGATAATGAAAACTTTGTAGTGGACAAAAAAGGTAAGGGCATTCAAATTTTGATGTATTTGTATGATTCATGTGTTGAAAATTGTTGTACAAGTTTGAAATC

mRNA sequence

AAAATGAAAGAAAAGAAAAGAAAAAGAAAAAACCATAACGATAGCTGAAGGAAGCAAAACAAGTTTGAGGTTTATACGGGTCATGTTCCCTCTGCGAATCGGGGAAAAGGCCGCTTCTTCTTCTTCTTCTATCGCCTTCTTCTGAGTTTCTCAATATCCCTCCAAATCGAAAACCTGAAGGTTGACGAAGATGTTGAGGATTGCAGCTCGAAGGCTCTCGTCACTCTCTTCTTCGCATTTCAAGCCCACTATTGCCTCTTCTTTGCCCGGTTCTCACAACATCATTGATTCCACTGATTCCGTCCCTTCCAATGATTTCAGATCCGGCGGATTCGTCAACACTTTCCCCATCGGACCTCACTTCCATCGCAATTCTAGAGGTTTTGCTTCTGATGCATTGACCTCAACCAAGGATGATGGCTTAATTCTGGATATTCCTGCAACTGTAGCTGCCATTAAGAATCCTTCTTCAAAAATAGTCTATGATGACTACAATCATGAACGATTTCCTCCTGGTGACCCCAGCAAGCGTGCATTTGCTTATTTTGTATTATCAGGTGGTCGGTTTGTCTATGCTTCCTTGATTCGTCTCCTTGTTCTCAAGTTTGTCCTCAGCATGTCAGCCAGTAAGGATGTTCTTGCCCTGGCCTCACTTGAGGTTGACCTTTCAAGCATCGAACCTGGTTCTACCGTGACAGTTAAGTGGCGTGGAAAACCAGTATTCATCAGGCGACGAACTGAGGATGATATTAAGTTAGCAAATAGCGTCGACATTGGATCTCTTCGTGACCCACAGCAGGATGGCGAGAGAGTTAAGGATCCAGAATGGCTTATCGTGATCGGTGTCTGCACGCATCTTGGTTGCATTCCGTTGCCAAATGCTGGTGATTATGGTGGGTGGTTTTGTCCATGCCATGGTTCTCATTACGACGTCTCTGGCAGAATCCGTAAAGGGCCAGCACCCTACAATTTGGAGGTACCCACCTACACCTTTTTGGATGACAACAAGCTTTTGATCGGTTAAAAAACCAATCTCTTCTTTTTGAGGTAATACAGAGGTTCGAGACCCTCAATTTTTATTTAAAGCAGATAAAGTTGCAGACATGTTTTGTTTCTTTTTTTTTTTTTTACTCCTTTGAGATTTTAGAAAGCTTTATGCAGTGAGAACACTGTAACTGTAACATTGCTTGGTGCATGAATGAATCTGAATAATTTTTCTGAATAAGACAATGAGTGAAAGATAATAGATTAGAACACCATCCTATTTGAGGATAATGAAAACTTTGTAGTGGACAAAAAAGGTAAGGGCATTCAAATTTTGATGTATTTGTATGATTCATGTGTTGAAAATTGTTGTACAAGTTTGAAATC

Coding sequence (CDS)

ATGTTGAGGATTGCAGCTCGAAGGCTCTCGTCACTCTCTTCTTCGCATTTCAAGCCCACTATTGCCTCTTCTTTGCCCGGTTCTCACAACATCATTGATTCCACTGATTCCGTCCCTTCCAATGATTTCAGATCCGGCGGATTCGTCAACACTTTCCCCATCGGACCTCACTTCCATCGCAATTCTAGAGGTTTTGCTTCTGATGCATTGACCTCAACCAAGGATGATGGCTTAATTCTGGATATTCCTGCAACTGTAGCTGCCATTAAGAATCCTTCTTCAAAAATAGTCTATGATGACTACAATCATGAACGATTTCCTCCTGGTGACCCCAGCAAGCGTGCATTTGCTTATTTTGTATTATCAGGTGGTCGGTTTGTCTATGCTTCCTTGATTCGTCTCCTTGTTCTCAAGTTTGTCCTCAGCATGTCAGCCAGTAAGGATGTTCTTGCCCTGGCCTCACTTGAGGTTGACCTTTCAAGCATCGAACCTGGTTCTACCGTGACAGTTAAGTGGCGTGGAAAACCAGTATTCATCAGGCGACGAACTGAGGATGATATTAAGTTAGCAAATAGCGTCGACATTGGATCTCTTCGTGACCCACAGCAGGATGGCGAGAGAGTTAAGGATCCAGAATGGCTTATCGTGATCGGTGTCTGCACGCATCTTGGTTGCATTCCGTTGCCAAATGCTGGTGATTATGGTGGGTGGTTTTGTCCATGCCATGGTTCTCATTACGACGTCTCTGGCAGAATCCGTAAAGGGCCAGCACCCTACAATTTGGAGGTACCCACCTACACCTTTTTGGATGACAACAAGCTTTTGATCGGTTAA

Protein sequence

MLRIAARRLSSLSSSHFKPTIASSLPGSHNIIDSTDSVPSNDFRSGGFVNTFPIGPHFHRNSRGFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDYGGWFCPCHGSHYDVSGRIRKGPAPYNLEVPTYTFLDDNKLLIG

Homology

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BLAST of Lsi09G008280 vs. Swiss-Prot
Match: UCRI2_TOBAC (Cytochrome b-c1 complex subunit Rieske-2, mitochondrial OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 6.7e-113
Identity = 202/277 (72.92%), Postives = 233/277 (84.12%), Query Frame = 1


Query: 1   MLRIAARRLSSLSSSHFKPTIASSLPGSHNIIDSTDSVPSNDFRSGGFVNTFPIGPHFHR 60
           MLRIA RR SSLS    +  + S  P S   I +      +D  S   ++   +   F  
Sbjct: 1   MLRIAGRRASSLS----RWPVRSVAPSSSAFISANHFSSDDDSSSPRSISP-SLASVFLH 60

Query: 61  NSRGFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDDYNHERFPPGDPSKRAFAYFV 120
           ++RGF+S++++   D GL+ D+P TVAAIKNP+SKIVYD++NHER+PPGDPSKRAFAYFV
Sbjct: 61  HTRGFSSNSVSHAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFV 120

Query: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180
           L+GGRFVYASL+RLL+LKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIR
Sbjct: 121 LTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIR 180

Query: 181 RRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDYGGWFCP 240
           RRTEDDI LANSVD+GSLRDPQQD ERVK PEWL+VIGVCTHLGCIPLPNAGD+GGWFCP
Sbjct: 181 RRTEDDINLANSVDLGSLRDPQQDAERVKSPEWLVVIGVCTHLGCIPLPNAGDFGGWFCP 240

Query: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLDDNKLLIG 278
           CHGSHYD+SGRIRKGPAPYNLEVPTY+FL++NKLLIG
Sbjct: 241 CHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 272

[Close]

BLAST of Lsi09G008280 vs. Swiss-Prot
Match: UCRI3_TOBAC (Cytochrome b-c1 complex subunit Rieske-3, mitochondrial OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 6.3e-111
Identity = 203/277 (73.29%), Postives = 233/277 (84.12%), Query Frame = 1


Query: 1   MLRIAARRLSSLSSSHFKPTIASSLPGSHNIIDSTDSVPSNDFRSGGFVNTFPIGPHFHR 60
           MLRIA R+LSS ++     T +SS   + N    TD   S+  RS    +   +   F  
Sbjct: 1   MLRIAGRKLSSSAA-----TRSSSAFFTRNPFTFTDD-SSSPARSPSPAS---LASQFLD 60

Query: 61  NSRGFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDDYNHERFPPGDPSKRAFAYFV 120
             RGF+S++++     GL+ D+PATVAAIKNPSSKIVYDD NHER+PPGDPSKRAFAYFV
Sbjct: 61  QFRGFSSNSVSPAHQTGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFV 120

Query: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180
           L+GGRFVYASL+RLL+LKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIR
Sbjct: 121 LTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIR 180

Query: 181 RRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDYGGWFCP 240
           RRTE+DI LANSVD+GSLRDPQQD ERVK+PEWL+VIGVCTHLGCIPLPNAGD+GGWFCP
Sbjct: 181 RRTEEDINLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCP 240

Query: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLDDNKLLIG 278
           CHGSHYD+SGRIRKGPAPYNLEVPTY+F+++NKLLIG
Sbjct: 241 CHGSHYDISGRIRKGPAPYNLEVPTYSFMEENKLLIG 268

[Close]

BLAST of Lsi09G008280 vs. Swiss-Prot
Match: UCRI5_TOBAC (Cytochrome b-c1 complex subunit Rieske-5, mitochondrial OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 1.4e-110
Identity = 198/278 (71.22%), Postives = 232/278 (83.45%), Query Frame = 1


Query: 1   MLRIAARRLSSLSSSHFKPTIASSLPGSHNIIDSTDS-VPSNDFRSGGFVNTFPIGPHFH 60
           MLRIA R+LSS +++       +  P +     S+ +  PS    +  F++ F       
Sbjct: 1   MLRIAGRKLSSSAAARSSSAFFTRNPFTFTDDSSSPTRSPSPTSLASQFLDQF------- 60

Query: 61  RNSRGFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDDYNHERFPPGDPSKRAFAYF 120
              RGF+S++++     GL+ D+PATVAAIKNPSSKIVYDD NHER+PPGDPSKRAFAYF
Sbjct: 61  ---RGFSSNSVSPAHQTGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYF 120

Query: 121 VLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFI 180
           VL+GGRFVYASL+RLL+LKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFI
Sbjct: 121 VLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFI 180

Query: 181 RRRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDYGGWFC 240
           RRRT++DI LANSVD+GSLRDPQQD ERVK+PEWL+VIGVCTHLGCIPLPNAGD+GGWFC
Sbjct: 181 RRRTDEDINLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFC 240

Query: 241 PCHGSHYDVSGRIRKGPAPYNLEVPTYTFLDDNKLLIG 278
           PCHGSHYD+SGRIRKGPAPYNLEVPTY+F+++NKLLIG
Sbjct: 241 PCHGSHYDISGRIRKGPAPYNLEVPTYSFMEENKLLIG 268

[Close]

BLAST of Lsi09G008280 vs. Swiss-Prot
Match: UCRI1_TOBAC (Cytochrome b-c1 complex subunit Rieske-1, mitochondrial (Fragment) OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 4.1e-110
Identity = 191/257 (74.32%), Postives = 223/257 (86.77%), Query Frame = 1


Query: 21  IASSLPGSHNIIDSTDSVPSNDFRSGGFVNTFPIGPHFHRNSRGFASDALTSTKDDGLIL 80
           + S+ P S   I +      +D  S   ++   +   F  ++RGF+S++++   D GL+ 
Sbjct: 3   VRSAAPSSSAFISANHFSSDDDSSSPRSISP-SLASVFLHHTRGFSSNSVSPAHDMGLVP 62

Query: 81  DIPATVAAIKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSGGRFVYASLIRLLVLKFV 140
           D+P TVAAIKNP+SKIVYD++NHER+PPGDPSKRAFAYFVL+GGRFVYASL+RLL+LKFV
Sbjct: 63  DLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLMRLLILKFV 122

Query: 141 LSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEDDIKLANSVDIGSLRD 200
           LSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRTEDDI LANSVD+GSLRD
Sbjct: 123 LSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDISLANSVDLGSLRD 182

Query: 201 PQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDYGGWFCPCHGSHYDVSGRIRKGPAPYN 260
           PQQD ERVK+PEWL+VIGVCTHLGCIPLPNAGD+GGWFCPCHGSHYD+SGRIRKGPAPYN
Sbjct: 183 PQQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYN 242

Query: 261 LEVPTYTFLDDNKLLIG 278
           LEVPTY+FL++NKLLIG
Sbjct: 243 LEVPTYSFLEENKLLIG 258

[Close]

BLAST of Lsi09G008280 vs. Swiss-Prot
Match: UCRI_SOLTU (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Solanum tuberosum GN=FES1 PE=1 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 5.3e-110
Identity = 200/279 (71.68%), Postives = 227/279 (81.36%), Query Frame = 1


Query: 1   MLRIAARRLSSLSSSHFKPTIASSLPGSHNIIDSTDSV--PSNDFRSGGFVNTFPIGPHF 60
           MLR+A RRLSS ++         S   S  + D +     PS    S            F
Sbjct: 1   MLRVAGRRLSSSAARSSSTFFTRS---SFTVTDDSSPARSPSPSLTSS-----------F 60

Query: 61  HRNSRGFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDDYNHERFPPGDPSKRAFAY 120
               RGF+S++++     GL+ D+PATVAAIKNPSSKIVYDD NHER+PPGDPSKRAFAY
Sbjct: 61  LDQIRGFSSNSVSPAHQLGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAY 120

Query: 121 FVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVF 180
           FVL+GGRFVYAS +RLL+LKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVF
Sbjct: 121 FVLTGGRFVYASSVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVF 180

Query: 181 IRRRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDYGGWF 240
           IRRRT+DDIKLANSVD+G+LRDPQQD ERVK+PEWL+V+GVCTHLGCIPLPNAGD+GGWF
Sbjct: 181 IRRRTDDDIKLANSVDLGTLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWF 240

Query: 241 CPCHGSHYDVSGRIRKGPAPYNLEVPTYTFLDDNKLLIG 278
           CPCHGSHYD+SGRIRKGPAPYNLEVPTY+FL++NKLLIG
Sbjct: 241 CPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 265

[Close]

BLAST of Lsi09G008280 vs. TrEMBL
Match: A0A0A0KTT3_CUCSA (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis sativus GN=Csa_5G464800 PE=4 SV=1)

HSP 1 Score: 516.9 bits (1330), Expect = 1.5e-143
Identity = 256/277 (92.42%), Postives = 263/277 (94.95%), Query Frame = 1


Query: 1   MLRIAARRLSSLSSSHFKPTIASSLPGSHNIIDSTDSVPSNDFRSGGFVNTFPIGPHFHR 60
           MLRIAARRLSSLSSSHF+PTIASS P SHNIIDSTDS   NDFRS GF NTFPI   F R
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSFPASHNIIDSTDS---NDFRSAGFFNTFPIRSQFDR 60

Query: 61  NSRGFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDDYNHERFPPGDPSKRAFAYFV 120
           +SRGFASDAL STKDDGLILDIPATVAA+KNPSSKIVYDDYNHERFPPGDPSKRAFAYFV
Sbjct: 61  HSRGFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFV 120

Query: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180
           LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR
Sbjct: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180

Query: 181 RRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDYGGWFCP 240
           RRTEDDIKLANSVDIGSLRDPQQD ERVKDPEWL+V+GVCTHLGCIPLPNAGDYGGWFCP
Sbjct: 181 RRTEDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCP 240

Query: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLDDNKLLIG 278
           CHGSHYDVSGRIRKGPAPYNLEVPTY+FL+ NKLLIG
Sbjct: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 274

[Close]

BLAST of Lsi09G008280 vs. TrEMBL
Match: A0A0A0KNC0_CUCSA (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis sativus GN=Csa_5G464790 PE=4 SV=1)

HSP 1 Score: 514.2 bits (1323), Expect = 9.7e-143
Identity = 249/277 (89.89%), Postives = 267/277 (96.39%), Query Frame = 1


Query: 1   MLRIAARRLSSLSSSHFKPTIASSLPGSHNIIDSTDSVPSNDFRSGGFVNTFPIGPHFHR 60
           MLR+AARRLSSLSSSHF+PTIASSLP SHNIIDSTDS   NDFRS GF +TFPI PHF R
Sbjct: 1   MLRVAARRLSSLSSSHFRPTIASSLPLSHNIIDSTDS---NDFRSAGFFHTFPIRPHFDR 60

Query: 61  NSRGFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDDYNHERFPPGDPSKRAFAYFV 120
           NSRGFASDALTSTK++ L+ D+PAT+AA+KNP+SKIVYD+YNHERFPPGDPSKRAFAYFV
Sbjct: 61  NSRGFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV 120

Query: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180
           LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIR
Sbjct: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIR 180

Query: 181 RRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDYGGWFCP 240
           RRTE+DIKLANSVDIG+LRDPQQDGERVKDPEWL+V+GVCTHLGCIPLPNAGD+GGWFCP
Sbjct: 181 RRTEEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCP 240

Query: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLDDNKLLIG 278
           CHGSHYDVSGRIRKGPAPYNLEVPTYTFL+DNKLLIG
Sbjct: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 274

[Close]

BLAST of Lsi09G008280 vs. TrEMBL
Match: M5WT51_PRUPE (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Prunus persica GN=PRUPE_ppa009909mg PE=4 SV=1)

HSP 1 Score: 439.1 bits (1128), Expect = 4.0e-120
Identity = 221/280 (78.93%), Postives = 245/280 (87.50%), Query Frame = 1


Query: 1   MLRIAARRLSSLSSSHFKPT---IASSLPGSHNIIDSTDSVPSNDFRSGGFVNTFPIGPH 60
           MLR+AARRL SLS+S ++P     ASS   S N+ID  DS  S+D RS  F   F     
Sbjct: 1   MLRVAARRLCSLSASPWRPNQAATASSSVLSRNLIDGRDS--SDDLRSIYFTTDF----- 60

Query: 61  FHRNSRGFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDDYNHERFPPGDPSKRAFA 120
            +  SRGFASD+LT +KD+ L+ D+P TVAA+KNP+SKIVYDDYNHER+PPGDPSKRAFA
Sbjct: 61  -YLPSRGFASDSLTPSKDNNLVPDVPPTVAAVKNPTSKIVYDDYNHERYPPGDPSKRAFA 120

Query: 121 YFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPV 180
           YFVL+GGRFVYASLIRLLVLKFVLSMSASKDVLA+ASLEVDLSSIEPG+TVTVKWRGKPV
Sbjct: 121 YFVLTGGRFVYASLIRLLVLKFVLSMSASKDVLAMASLEVDLSSIEPGATVTVKWRGKPV 180

Query: 181 FIRRRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDYGGW 240
           FIRRRT+DDIKLANSVD+ SLRDPQQD ERVK+PEWLIV+GVCTHLGCIPLPNAGD+GGW
Sbjct: 181 FIRRRTDDDIKLANSVDVNSLRDPQQDAERVKNPEWLIVVGVCTHLGCIPLPNAGDFGGW 240

Query: 241 FCPCHGSHYDVSGRIRKGPAPYNLEVPTYTFLDDNKLLIG 278
           FCPCHGSHYDVSGRIRKGPAPYNLEVPTYTFLD+NKLLIG
Sbjct: 241 FCPCHGSHYDVSGRIRKGPAPYNLEVPTYTFLDENKLLIG 272

[Close]

BLAST of Lsi09G008280 vs. TrEMBL
Match: A0A067L0B8_JATCU (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Jatropha curcas GN=JCGZ_26880 PE=4 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 1.5e-119
Identity = 213/279 (76.34%), Postives = 241/279 (86.38%), Query Frame = 1


Query: 1   MLRIAARRLSSLSSSH--FKPTIASSLPGSHNIIDSTDSVPSNDFRSGGFVNTFPIGPHF 60
           MLR+A RRLSS+ S+   ++P  A+    S N I+S DS  S++ +S    + F   PHF
Sbjct: 1   MLRVAVRRLSSICSTQPSWRPNQAALSIVSSNPINSGDSSSSDEIKSKVLKDYFAFRPHF 60

Query: 61  HRNSRGFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDDYNHERFPPGDPSKRAFAY 120
           H   RGF+S +LT   +DG+I D+PATVAA+KNP+SKI YD+YNHERFPPGDPSKRAFAY
Sbjct: 61  HPPQRGFSSGSLTPRNEDGIISDVPATVAAVKNPTSKITYDEYNHERFPPGDPSKRAFAY 120

Query: 121 FVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVF 180
           FVL+GGRFVYAS+IRLL+LKFVLSMSASKDVLALASLEVDLS IEPGSTVTVKWRGKPVF
Sbjct: 121 FVLTGGRFVYASVIRLLILKFVLSMSASKDVLALASLEVDLSGIEPGSTVTVKWRGKPVF 180

Query: 181 IRRRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDYGGWF 240
           IRRRTEDDIKLANSVD+ SLRDPQ D +RVKDPEWLIVIGVCTHLGCIPLPNAGD+GGWF
Sbjct: 181 IRRRTEDDIKLANSVDLASLRDPQPDADRVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWF 240

Query: 241 CPCHGSHYDVSGRIRKGPAPYNLEVPTYTFLDDNKLLIG 278
           CPCHGSHYD+SGRIRKGPAPYNLEVPTYTFLD+NKL+IG
Sbjct: 241 CPCHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLMIG 279

[Close]

BLAST of Lsi09G008280 vs. TrEMBL
Match: W9QM11_9ROSA (Cytochrome b-c1 complex subunit Rieske-2 OS=Morus notabilis GN=L484_007559 PE=4 SV=1)

HSP 1 Score: 435.3 bits (1118), Expect = 5.7e-119
Identity = 220/286 (76.92%), Postives = 247/286 (86.36%), Query Frame = 1


Query: 1   MLRIAARRLSSLSSS------HFKPTI--ASSLPGSHNIIDSTDSVPSNDFRSGGFVNTF 60
           MLR+AARRLSSLSS+      ++   I  ASSL   H I  S DS  S+D      + +F
Sbjct: 1   MLRVAARRLSSLSSTDSLRRPNYSAAISTASSLLSPHPINASADS-SSDDLP----LRSF 60

Query: 61  P-IGPHFHRNSRGFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDDYNHERFPPGDP 120
           P + PHFH  SRGFASD+LT +K+  L+LD+PATVAA+KNP+SKI YD+YNHER+PPGDP
Sbjct: 61  PSLTPHFHIPSRGFASDSLTPSKEHNLVLDVPATVAAVKNPTSKIEYDEYNHERYPPGDP 120

Query: 121 SKRAFAYFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVK 180
           SKRAFAYFVL+GGRFVYASLIRLL+LKFVLSMSASKDVLA+ASLE DLSSIEPGSTVTVK
Sbjct: 121 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEADLSSIEPGSTVTVK 180

Query: 181 WRGKPVFIRRRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNA 240
           WRGKPVFIRRRTEDDIKLANSVD+ SLRDPQ D ERVK+PEWL+V+GVCTHLGCIPLPNA
Sbjct: 181 WRGKPVFIRRRTEDDIKLANSVDLNSLRDPQPDAERVKNPEWLVVVGVCTHLGCIPLPNA 240

Query: 241 GDYGGWFCPCHGSHYDVSGRIRKGPAPYNLEVPTYTFLDDNKLLIG 278
           GD+GGWFCPCHGSHYD+SGRIRKGPAPYNLEVPTYTFLD+NKLLIG
Sbjct: 241 GDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 281

[Close]

BLAST of Lsi09G008280 vs. TAIR10
Match: AT5G13440.1 (AT5G13440.1 Ubiquinol-cytochrome C reductase iron-sulfur subunit)

HSP 1 Score: 396.0 bits (1016), Expect = 1.9e-110
Identity = 199/283 (70.32%), Postives = 230/283 (81.27%), Query Frame = 1


Query: 1   MLRIAARRLSSLS-----SSHFKPTIASSLPGSHNIIDSTDSVPSNDFRSGGFVNTFPIG 60
           MLR+A RRL S+S     ++ F  +   +L    N   ++ SVPS D  S          
Sbjct: 1   MLRVAGRRLFSVSQRSSTATSFVLSRDHTLSDGGNSSSASRSVPSADLSSFN-------- 60

Query: 61  PHFHRNS-RGFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDDYNHERFPPGDPSKR 120
             +HR+  RGFAS  +T   + G   ++PATV A+K P+SKIVYDD+NHER+PPGDPSKR
Sbjct: 61  -SYHRSVIRGFASQVITQGNEIGFGSEVPATVEAVKTPNSKIVYDDHNHERYPPGDPSKR 120

Query: 121 AFAYFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRG 180
           AFAYFVLSGGRFVYAS++RLLVLK ++SMSASKDVLALASLEVDL SIEPG+TVTVKWRG
Sbjct: 121 AFAYFVLSGGRFVYASVLRLLVLKLIVSMSASKDVLALASLEVDLGSIEPGTTVTVKWRG 180

Query: 181 KPVFIRRRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDY 240
           KPVFIRRRTEDDIKLANSVD+GSLRDPQ+D  RVK+PEWLIV+GVCTHLGCIPLPNAGDY
Sbjct: 181 KPVFIRRRTEDDIKLANSVDVGSLRDPQEDSVRVKNPEWLIVVGVCTHLGCIPLPNAGDY 240

Query: 241 GGWFCPCHGSHYDVSGRIRKGPAPYNLEVPTYTFLDDNKLLIG 278
           GGWFCPCHGSHYD+SGRIRKGPAPYNLEVPTY+FL++NKLLIG
Sbjct: 241 GGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 274

[Close]

BLAST of Lsi09G008280 vs. TAIR10
Match: AT5G13430.1 (AT5G13430.1 Ubiquinol-cytochrome C reductase iron-sulfur subunit)

HSP 1 Score: 390.2 bits (1001), Expect = 1.1e-108
Identity = 196/285 (68.77%), Postives = 227/285 (79.65%), Query Frame = 1


Query: 1   MLRIAARRLSSLSSSHFKPTIASSLPGSHNIID-------STDSVPSNDFRSGGFVNTFP 60
           MLR+A RRL S+S      T +  +   H + D       +  S+PS D  S        
Sbjct: 1   MLRVAGRRLFSVSQRSSTAT-SFVVSRDHTLSDGGGDSSSAPRSLPSADLSS-------- 60

Query: 61  IGPHFHRNS-RGFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDDYNHERFPPGDPS 120
               +HR+  RGF+S  L    + G   ++PATV A+K P+SKIVYDD+NHER+PPGDPS
Sbjct: 61  ----YHRSLIRGFSSQVLAQGNEIGFGSEVPATVEAVKTPNSKIVYDDHNHERYPPGDPS 120

Query: 121 KRAFAYFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKW 180
           KRAFAYFVLSGGRFVYAS++RLLVLK ++SMSASKDVLALASLEVDL SIEPG+TVTVKW
Sbjct: 121 KRAFAYFVLSGGRFVYASVLRLLVLKLIVSMSASKDVLALASLEVDLGSIEPGTTVTVKW 180

Query: 181 RGKPVFIRRRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAG 240
           RGKPVFIRRRTEDDIKLANSVD+GSLRDPQ+D  RVK+PEWL+V+GVCTHLGCIPLPNAG
Sbjct: 181 RGKPVFIRRRTEDDIKLANSVDVGSLRDPQEDSVRVKNPEWLVVVGVCTHLGCIPLPNAG 240

Query: 241 DYGGWFCPCHGSHYDVSGRIRKGPAPYNLEVPTYTFLDDNKLLIG 278
           DYGGWFCPCHGSHYD+SGRIRKGPAPYNLEVPTY+FL++NKLLIG
Sbjct: 241 DYGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 272

[Close]

BLAST of Lsi09G008280 vs. TAIR10
Match: AT4G03280.1 (AT4G03280.1 photosynthetic electron transfer C)

HSP 1 Score: 54.7 bits (130), Expect = 1.1e-07
Identity = 22/43 (51.16%), Postives = 29/43 (67.44%), Query Frame = 1


Query: 219 VCTHLGCIPLPNAGDYGGWFCPCHGSHYDVSGRIRKGPAPYNL 262
           VCTHLGC+   N  +   + CPCHGS Y+  GR+ +GPAP +L
Sbjct: 156 VCTHLGCVVPWNKAE-NKFLCPCHGSQYNAQGRVVRGPAPLSL 197

[Close]

BLAST of Lsi09G008280 vs. NCBI nr
Match: gi|659072408|ref|XP_008465498.1| (PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis melo])

HSP 1 Score: 526.2 bits (1354), Expect = 3.5e-146
Identity = 259/277 (93.50%), Postives = 266/277 (96.03%), Query Frame = 1


Query: 1   MLRIAARRLSSLSSSHFKPTIASSLPGSHNIIDSTDSVPSNDFRSGGFVNTFPIGPHFHR 60
           MLRIAARRLSSLSSSHF+PTIASSLPGSHNIIDS DS   NDFRS GF NTFPI PHF R
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSLPGSHNIIDSADS---NDFRSAGFFNTFPIRPHFDR 60

Query: 61  NSRGFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDDYNHERFPPGDPSKRAFAYFV 120
           NSRGFASDAL STKDDGLI+DIPATVAA+KNPSSKIVYDDYNHERFPPGDPSKRAFAYFV
Sbjct: 61  NSRGFASDALASTKDDGLIMDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFV 120

Query: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180
           LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR
Sbjct: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180

Query: 181 RRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDYGGWFCP 240
           RRTEDDIKLANSVDIGSLRDPQQD ERVKDPEWL+V+GVCTHLGCIPLPNAGDYGGWFCP
Sbjct: 181 RRTEDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCP 240

Query: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLDDNKLLIG 278
           CHGSHYDVSGRIRKGPAPYNLEVPTY+FL+ NKLLIG
Sbjct: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 274

[Close]

BLAST of Lsi09G008280 vs. NCBI nr
Match: gi|659072410|ref|XP_008465508.1| (PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis melo])

HSP 1 Score: 523.1 bits (1346), Expect = 3.0e-145
Identity = 255/277 (92.06%), Postives = 268/277 (96.75%), Query Frame = 1


Query: 1   MLRIAARRLSSLSSSHFKPTIASSLPGSHNIIDSTDSVPSNDFRSGGFVNTFPIGPHFHR 60
           MLRIAARRLSSLSSSHF+PTIASSLPGSHNIIDSTDS   NDFRSGGF NTFPIGPHF R
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSLPGSHNIIDSTDS---NDFRSGGFFNTFPIGPHFDR 60

Query: 61  NSRGFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDDYNHERFPPGDPSKRAFAYFV 120
           NSRGFASDAL+S K+  L+ D+PATVAA+KNP+SKIVYD+YNHERFPPGDPSKRAFAYFV
Sbjct: 61  NSRGFASDALSSMKETNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV 120

Query: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180
           LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR
Sbjct: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180

Query: 181 RRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDYGGWFCP 240
           RRTE+DIKLANSVDIG+LRDPQQDGERVKDPEWLIV+GVCTHLGCIPLPNAGD+GGWFCP
Sbjct: 181 RRTEEDIKLANSVDIGTLRDPQQDGERVKDPEWLIVVGVCTHLGCIPLPNAGDFGGWFCP 240

Query: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLDDNKLLIG 278
           CHGSHYDVSGRIRKGPAPYNLEVPTYTFL+DNKLLIG
Sbjct: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 274

[Close]

BLAST of Lsi09G008280 vs. NCBI nr
Match: gi|449452030|ref|XP_004143763.1| (PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis sativus])

HSP 1 Score: 516.9 bits (1330), Expect = 2.1e-143
Identity = 256/277 (92.42%), Postives = 263/277 (94.95%), Query Frame = 1


Query: 1   MLRIAARRLSSLSSSHFKPTIASSLPGSHNIIDSTDSVPSNDFRSGGFVNTFPIGPHFHR 60
           MLRIAARRLSSLSSSHF+PTIASS P SHNIIDSTDS   NDFRS GF NTFPI   F R
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSFPASHNIIDSTDS---NDFRSAGFFNTFPIRSQFDR 60

Query: 61  NSRGFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDDYNHERFPPGDPSKRAFAYFV 120
           +SRGFASDAL STKDDGLILDIPATVAA+KNPSSKIVYDDYNHERFPPGDPSKRAFAYFV
Sbjct: 61  HSRGFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFV 120

Query: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180
           LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR
Sbjct: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180

Query: 181 RRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDYGGWFCP 240
           RRTEDDIKLANSVDIGSLRDPQQD ERVKDPEWL+V+GVCTHLGCIPLPNAGDYGGWFCP
Sbjct: 181 RRTEDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCP 240

Query: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLDDNKLLIG 278
           CHGSHYDVSGRIRKGPAPYNLEVPTY+FL+ NKLLIG
Sbjct: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 274

[Close]

BLAST of Lsi09G008280 vs. NCBI nr
Match: gi|449452028|ref|XP_004143762.1| (PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis sativus])

HSP 1 Score: 514.2 bits (1323), Expect = 1.4e-142
Identity = 249/277 (89.89%), Postives = 267/277 (96.39%), Query Frame = 1


Query: 1   MLRIAARRLSSLSSSHFKPTIASSLPGSHNIIDSTDSVPSNDFRSGGFVNTFPIGPHFHR 60
           MLR+AARRLSSLSSSHF+PTIASSLP SHNIIDSTDS   NDFRS GF +TFPI PHF R
Sbjct: 1   MLRVAARRLSSLSSSHFRPTIASSLPLSHNIIDSTDS---NDFRSAGFFHTFPIRPHFDR 60

Query: 61  NSRGFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDDYNHERFPPGDPSKRAFAYFV 120
           NSRGFASDALTSTK++ L+ D+PAT+AA+KNP+SKIVYD+YNHERFPPGDPSKRAFAYFV
Sbjct: 61  NSRGFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV 120

Query: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180
           LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIR
Sbjct: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIR 180

Query: 181 RRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDYGGWFCP 240
           RRTE+DIKLANSVDIG+LRDPQQDGERVKDPEWL+V+GVCTHLGCIPLPNAGD+GGWFCP
Sbjct: 181 RRTEEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCP 240

Query: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLDDNKLLIG 278
           CHGSHYDVSGRIRKGPAPYNLEVPTYTFL+DNKLLIG
Sbjct: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 274

[Close]

BLAST of Lsi09G008280 vs. NCBI nr
Match: gi|595939955|ref|XP_007215798.1| (hypothetical protein PRUPE_ppa009909mg [Prunus persica])

HSP 1 Score: 439.1 bits (1128), Expect = 5.7e-120
Identity = 221/280 (78.93%), Postives = 245/280 (87.50%), Query Frame = 1


Query: 1   MLRIAARRLSSLSSSHFKPT---IASSLPGSHNIIDSTDSVPSNDFRSGGFVNTFPIGPH 60
           MLR+AARRL SLS+S ++P     ASS   S N+ID  DS  S+D RS  F   F     
Sbjct: 1   MLRVAARRLCSLSASPWRPNQAATASSSVLSRNLIDGRDS--SDDLRSIYFTTDF----- 60

Query: 61  FHRNSRGFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDDYNHERFPPGDPSKRAFA 120
            +  SRGFASD+LT +KD+ L+ D+P TVAA+KNP+SKIVYDDYNHER+PPGDPSKRAFA
Sbjct: 61  -YLPSRGFASDSLTPSKDNNLVPDVPPTVAAVKNPTSKIVYDDYNHERYPPGDPSKRAFA 120

Query: 121 YFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPV 180
           YFVL+GGRFVYASLIRLLVLKFVLSMSASKDVLA+ASLEVDLSSIEPG+TVTVKWRGKPV
Sbjct: 121 YFVLTGGRFVYASLIRLLVLKFVLSMSASKDVLAMASLEVDLSSIEPGATVTVKWRGKPV 180

Query: 181 FIRRRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDYGGW 240
           FIRRRT+DDIKLANSVD+ SLRDPQQD ERVK+PEWLIV+GVCTHLGCIPLPNAGD+GGW
Sbjct: 181 FIRRRTDDDIKLANSVDVNSLRDPQQDAERVKNPEWLIVVGVCTHLGCIPLPNAGDFGGW 240

Query: 241 FCPCHGSHYDVSGRIRKGPAPYNLEVPTYTFLDDNKLLIG 278
           FCPCHGSHYDVSGRIRKGPAPYNLEVPTYTFLD+NKLLIG
Sbjct: 241 FCPCHGSHYDVSGRIRKGPAPYNLEVPTYTFLDENKLLIG 272

The following BLAST results are available for this feature:

BLAST of Lsi09G008280 vs. Swiss-Prot


Match Name	E-value	Identity	Description
UCRI2_TOBAC	6.7e-113	72.92	Cytochrome b-c1 complex subunit Rieske-2, mitochondrial OS=Nicotiana tabacum PE=...	[more]
UCRI3_TOBAC	6.3e-111	73.29	Cytochrome b-c1 complex subunit Rieske-3, mitochondrial OS=Nicotiana tabacum PE=...	[more]
UCRI5_TOBAC	1.4e-110	71.22	Cytochrome b-c1 complex subunit Rieske-5, mitochondrial OS=Nicotiana tabacum PE=...	[more]
UCRI1_TOBAC	4.1e-110	74.32	Cytochrome b-c1 complex subunit Rieske-1, mitochondrial (Fragment) OS=Nicotiana ...	[more]
UCRI_SOLTU	5.3e-110	71.68	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Solanum tuberosum GN=FE...	[more]

BLAST of Lsi09G008280 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KTT3_CUCSA	1.5e-143	92.42	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis sativus GN=Csa_...	[more]
A0A0A0KNC0_CUCSA	9.7e-143	89.89	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis sativus GN=Csa_...	[more]
M5WT51_PRUPE	4.0e-120	78.93	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Prunus persica GN=PRUPE...	[more]
A0A067L0B8_JATCU	1.5e-119	76.34	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Jatropha curcas GN=JCGZ...	[more]
W9QM11_9ROSA	5.7e-119	76.92	Cytochrome b-c1 complex subunit Rieske-2 OS=Morus notabilis GN=L484_007559 PE=4 ...	[more]

BLAST of Lsi09G008280 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G13440.1	1.9e-110	70.32	Ubiquinol-cytochrome C reductase iron-sulfur subunit	[more]
AT5G13430.1	1.1e-108	68.77	Ubiquinol-cytochrome C reductase iron-sulfur subunit	[more]
AT4G03280.1	1.1e-07	51.16	photosynthetic electron transfer C	[more]

BLAST of Lsi09G008280 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659072408\|ref\|XP_008465498.1\|	3.5e-146	93.50	PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis...	[more]
gi\|659072410\|ref\|XP_008465508.1\|	3.0e-145	92.06	PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis...	[more]
gi\|449452030\|ref\|XP_004143763.1\|	2.1e-143	92.42	PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis...	[more]
gi\|449452028\|ref\|XP_004143762.1\|	1.4e-142	89.89	PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis...	[more]
gi\|595939955\|ref\|XP_007215798.1\|	5.7e-120	78.93	hypothetical protein PRUPE_ppa009909mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0016491	oxidoreductase activity
GO:0051537	2 iron, 2 sulfur cluster binding
GO:0016679	oxidoreductase activity, acting on diphenols and related substances as donors
GO:0008121	ubiquinol-cytochrome-c reductase activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

Vocabulary: **INTERPRO**
Term	Definition
IPR017941	Rieske_2Fe-2S
IPR014349	Rieske_Fe-S_prot
IPR006317	Ubiquinol_cyt_c_Rdtase_Fe-S-su
IPR005805	Rieske_Fe-S_prot_C
IPR004192	Rieske_TM

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1902600	hydrogen ion transmembrane transport
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0006119	oxidative phosphorylation
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0070469	respiratory chain
cellular_component	GO:0045275	respiratory chain complex III
cellular_component	GO:0016020	membrane
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0008121	ubiquinol-cytochrome-c reductase activity
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0016679	oxidoreductase activity, acting on diphenols and related substances as donors

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G008280.1	Lsi09G008280.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004192	Ubiquinol cytochrome reductase, transmembrane domain	GENE3D	G3DSA:1.20.5.270		coord: 100..137 score: 3.
IPR004192	Ubiquinol cytochrome reductase, transmembrane domain	PFAM	PF02921	UCR_TM	coord: 103..148 score: 4.6
IPR005805	Rieske iron-sulphur protein, C-terminal	PRINTS	PR00162	RIESKE	coord: 249..261 score: 3.0E-17coord: 237..249 score: 3.0E-17coord: 215..226 score: 3.0
IPR006317	Ubiquinol-cytochrome c reductase, iron-sulphur subunit	TIGRFAMs	TIGR01416	TIGR01416	coord: 133..277 score: 3.0
IPR014349	Rieske iron-sulphur protein	PANTHER	PTHR10134	CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL	coord: 38..277 score: 1.7E-136coord: 2..20 score: 1.7E
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	GENE3D	G3DSA:2.102.10.10		coord: 138..276 score: 3.3
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	PFAM	PF00355	Rieske	coord: 160..263 score: 1.4
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	PROFILE	PS51296	RIESKE	coord: 207..275 score: 18
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	unknown	SSF50022	ISP domain	coord: 139..275 score: 1.44
None	No IPR available	PANTHER	PTHR10134:SF1	CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL	coord: 38..277 score: 1.7E-136coord: 2..20 score: 1.7E
None	No IPR available	unknown	SSF81502	ISP transmembrane anchor	coord: 88..150 score: 5.89

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi09G008280	CsGy5G015620	Cucumber (Gy14) v2	cgyblsiB296

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi09G008280	Cucumber (Gy14) v1	cgylsiB005
Lsi09G008280	Cucurbita maxima (Rimu)	cmalsiB268
Lsi09G008280	Cucurbita maxima (Rimu)	cmalsiB622
Lsi09G008280	Cucurbita moschata (Rifu)	cmolsiB256
Lsi09G008280	Cucurbita moschata (Rifu)	cmolsiB610
Lsi09G008280	Cucurbita pepo (Zucchini)	cpelsiB130
Lsi09G008280	Cucurbita pepo (Zucchini)	cpelsiB311
Lsi09G008280	Wild cucumber (PI 183967)	cpilsiB324
Lsi09G008280	Cucumber (Chinese Long) v2	culsiB324
Lsi09G008280	Melon (DHL92) v3.5.1	lsimeB013
Lsi09G008280	Watermelon (Charleston Gray)	lsiwcgB008
Lsi09G008280	Watermelon (97103) v1	lsiwmB028
Lsi09G008280	Melon (DHL92) v3.6.1	lsimedB014
Lsi09G008280	Silver-seed gourd	carlsiB433
Lsi09G008280	Silver-seed gourd	carlsiB754
Lsi09G008280	Cucumber (Chinese Long) v3	cuclsiB347
Lsi09G008280	Watermelon (97103) v2	lsiwmbB007
Lsi09G008280	Wax gourd	lsiwgoB026