Lsi09G007990 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCAATCTTCATCACAGTCTCATCAGACTACTCTCGCTCATCGACTTCTCCACCATTCCACAATCCATTTCCCACTCATCGCCTCTTCAGAAACCCTAATCCTTAATCGGTCGCCATGGCCGCATTATCCACGGTGGTCGGATCTCAGCCTCAGCCGGCGATCAAAGTCATCGCTCTCTGCGGTTCTCTTCGCCAAAATTCTTCCAACAGAGGCCTCATTCGAGCTGGTAATCCAACTCTCTCTAATCTCTCCTCATCCTTCTTCTTCTCTGCTTTGCTCTGCTTTTTCCAATCTTCCCCCGCTGTGGTTGCATTGCAGCGACGGAGATAGCAAAGGAATCGATCGATGGATTATTGCAAATCGAATATGTAGATATCTCCCCTTTGCCGATGCTCAACACCGATTTGGAGGTTGATGGAACATATCCGCCCGTCGTTGAGGCGTTTCGCCGGAAGATTCTCGAAGCCGATAGCATTCTCTTTGCTTCGCCGGAATATAACTACTCTGTTACCGGTACATTCCTTTTCATTTTCTTTCTTTTTTTCTCTCTAAAAGGAAATAGTTCTTTCGTTTTAAACCGTCCCCTTCTTTTAATCCACAAAAGGAAAAATTAAAAAAAAAATTGAAAAAAACCAAAAACAAAGTTATGACAATTTTTTACTCAGACAATTCCCGTGACAAATGGGTGCAGCAACCTACCTAAGTAATTTTTTTTAATAAATAAAACCTGTCAGCTTTTACTTTTTTATTGAAAACACGTGTCTTGTCAACAATAATTAGACTAACAATACTAAATTACAATTTTTTCGTTTAAATATATTTCCGTCCTTTTAATTTTAATTTTTGTAAAATGTTTATTTTGATTATTATACTTTTGGTCCCTACTTTTTTAAAAAGTAATTATTTTTCTCTATTTATTTTCATTTCTATGACCACTTTTTGAAAGTTCAAAGACCAAAATACAAGTACAAGGATCAAAATGAACATTTTGAAAATATGTATATGGACTAAAATGAACATTTTGAAAGTATAAAAACAAAAATGAACCAAAACCAAAATTATAGGGACCAAAATGGTATTTAAAATTAAACTAATAATTCAATAATTTGAACTTTAAACTTTGAACTTTTGCAAGCATGTCAATTAACACATTCATTTAGACTTTGTTGAAGAAATATCGTACCGAACATATAATTGTTTTAAATTAAACTTCTATATTGTTATAAGTGAATCAATTTAGACATATTACATTTGAAAATCATCCATGTATTCAATTCTTACACATACGTAGACTTCTTCAAATGTTGGGTTGATAAAATCGACAATAGACTTGACAATGGAAGTATAAATTAATACACTCATAAAAATTCAATGTTTAAATTGATACAACCCCCAAAGTTTAGGTGTGCATATTGATATTTTCTTGTGTTTATTTGGTTCTTAAAACTAATACATTCTTAAATTTTTAATTTTATGGTTTTATATATATGTTCTTGAAGATTAAAAGTTGTCTAAAACGTCCTTAAACTTTTAATTTTATGTTATTGATTTTTTATTTTTCAATTTTACATCTAACAAATTCTTGATTTATTTGATATTTCTTAACATTAATGGTCCATTAGACATGCATAAAATTAAAATTTTAGAAAAAATATTCTTTTTCCTCTCTTAAGTTTGGGTTACTCATATTAAGGGTATGTTTGGATTGACTAAAGAATTTTTTTTTTTAAGTCATTTTTATTTAAACTTTTTTTATCAAAACTGTTTAAAACACTTTGAAAGTGTTTCAAAGGATGTTCAGAGAGGTTGCCAAACACTTCAATTTTTTTGAAAAAATAACTTATTTTCAAAATTAAATCCTTGAAAAGTTAAACCAAAACACACCCTAAAAGATCAATATGGTAAATTTTACTTGTATGTCATGTCAGGTGCTTAAGTGGGACTAGTTAGTTTGAATTTTCAACTTCTTTAAGCTATGTTTAGAGCGCGTTCTAATCCCTTATGAAAAATTAATTTAATCCACATCTTAATACAAAACTTTCAATTTCATCCTATTAAATCAATAAAACCCAACCACAAAATCCAACCAAGACGATCAAACCAAAAAACAAGTGATTAAAGTATTCTTCGTTTCACTTCACATTACATCAATTTAAGAGATTATAGGTTCAAATCTCTACCTCTCCATTTATTACTCAAAACTTTTCCATATTATTTGAGTTTGATTTAGTTGAAAATGTTTGTTATTAGCACCATTGAAGAATGCATTAGATTGGGGATCAAGGCCACCAAATGTATGGGGAGACAAAGCAGCAGCAATAGTGAGTGCAAGTGGTGGCTCTGGTGGTGTAAGATCACAGTACCATCTTCGCCAAATTGGAGTCTTTCTTGACCTTCATTTCATAAACAAGCCTGAGTTTTTCTTGAATGCACATCAGCCACCGCGCAAGTTTGACAGCACCGGCGACTTGATCGATGCTGAAGTTCGAGAGAAGTTGAAGGCTCTTCTTCTGTCCTTGCGTGCATTTTCCTTGAGACTTAAAGGAATTAGCTAAACCCCTCTAAATTGATGAACATTGGTGAGATATTATTATTGCTTGACAACATTTATGTTATATGTGCTGTCTTGTCTGCTTACTGTCTTACCAGCGTATCGAGCACTTGACTTTGAATAAATTTTGAGAGCGAAATATTCATCAAAACTCGTTTTTTAAATATATAAATGCATAAGTTTATTGACTTTGAATTTCCTCTTCTATAGAAATGTATATTTTAATAAACGTGTTATTACAGTATTTGTGTCCATGTCCGTGTCCTAGAATTTGAACAAATGACGTGTCATTGTGTCTGTGTCG CCAATCTTCATCACAGTCTCATCAGACTACTCTCGCTCATCGACTTCTCCACCATTCCACAATCCATTTCCCACTCATCGCCTCTTCAGAAACCCTAATCCTTAATCGGTCGCCATGGCCGCATTATCCACGGTGGTCGGATCTCAGCCTCAGCCGGCGATCAAAGTCATCGCTCTCTGCGGTTCTCTTCGCCAAAATTCTTCCAACAGAGGCCTCATTCGAGCTGCGACGGAGATAGCAAAGGAATCGATCGATGGATTATTGCAAATCGAATATGTAGATATCTCCCCTTTGCCGATGCTCAACACCGATTTGGAGGTTGATGGAACATATCCGCCCGTCGTTGAGGCGTTTCGCCGGAAGATTCTCGAAGCCGATAGCATTCTCTTTGCTTCGCCGGAATATAACTACTCTGTTACCGCACCATTGAAGAATGCATTAGATTGGGGATCAAGGCCACCAAATGTATGGGGAGACAAAGCAGCAGCAATAGTGAGTGCAAGTGGTGGCTCTGGTGGTGTAAGATCACAGTACCATCTTCGCCAAATTGGAGTCTTTCTTGACCTTCATTTCATAAACAAGCCTGAGTTTTTCTTGAATGCACATCAGCCACCGCGCAAGTTTGACAGCACCGGCGACTTGATCGATGCTGAAGTTCGAGAGAAGTTGAAGGCTCTTCTTCTGTCCTTGCGTGCATTTTCCTTGAGACTTAAAGGAATTAGCTAAACCCCTCTAAATTGATGAACATTGGTGAGATATTATTATTGCTTGACAACATTTATGTTATATGTGCTGTCTTGTCTGCTTACTGTCTTACCAGCGTATCGAGCACTTGACTTTGAATAAATTTTGAGAGCGAAATATTCATCAAAACTCGTTTTTTAAATATATAAATGCATAAGTTTATTGACTTTGAATTTCCTCTTCTATAGAAATGTATATTTTAATAAACGTGTTATTACAGTATTTGTGTCCATGTCCGTGTCCTAGAATTTGAACAAATGACGTGTCATTGTGTCTGTGTCG ATGGCCGCATTATCCACGGTGGTCGGATCTCAGCCTCAGCCGGCGATCAAAGTCATCGCTCTCTGCGGTTCTCTTCGCCAAAATTCTTCCAACAGAGGCCTCATTCGAGCTGCGACGGAGATAGCAAAGGAATCGATCGATGGATTATTGCAAATCGAATATGTAGATATCTCCCCTTTGCCGATGCTCAACACCGATTTGGAGGTTGATGGAACATATCCGCCCGTCGTTGAGGCGTTTCGCCGGAAGATTCTCGAAGCCGATAGCATTCTCTTTGCTTCGCCGGAATATAACTACTCTGTTACCGCACCATTGAAGAATGCATTAGATTGGGGATCAAGGCCACCAAATGTATGGGGAGACAAAGCAGCAGCAATAGTGAGTGCAAGTGGTGGCTCTGGTGGTGTAAGATCACAGTACCATCTTCGCCAAATTGGAGTCTTTCTTGACCTTCATTTCATAAACAAGCCTGAGTTTTTCTTGAATGCACATCAGCCACCGCGCAAGTTTGACAGCACCGGCGACTTGATCGATGCTGAAGTTCGAGAGAAGTTGAAGGCTCTTCTTCTGTCCTTGCGTGCATTTTCCTTGAGACTTAAAGGAATTAGCTAA MAALSTVVGSQPQPAIKVIALCGSLRQNSSNRGLIRAATEIAKESIDGLLQIEYVDISPLPMLNTDLEVDGTYPPVVEAFRRKILEADSILFASPEYNYSVTAPLKNALDWGSRPPNVWGDKAAAIVSASGGSGGVRSQYHLRQIGVFLDLHFINKPEFFLNAHQPPRKFDSTGDLIDAEVREKLKALLLSLRAFSLRLKGIS
BLAST of Lsi09G007990 vs. Swiss-Prot
Match: NQR_SOLTU (NAD(P)H:quinone oxidoreductase OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 286.6 bits (732), Expect = 2.2e-76 Identity = 141/189 (74.60%), Postives = 160/189 (84.66%), Query Frame = 1
BLAST of Lsi09G007990 vs. Swiss-Prot
Match: NQR_ARATH (NADPH:quinone oxidoreductase OS=Arabidopsis thaliana GN=NQR PE=1 SV=1) HSP 1 Score: 285.8 bits (730), Expect = 3.7e-76 Identity = 139/189 (73.54%), Postives = 165/189 (87.30%), Query Frame = 1
BLAST of Lsi09G007990 vs. Swiss-Prot
Match: NQR2_ORYSJ (Probable NADPH:quinone oxidoreductase 2 OS=Oryza sativa subsp. japonica GN=Os01g0954000 PE=2 SV=1) HSP 1 Score: 271.2 bits (692), Expect = 9.4e-72 Identity = 130/193 (67.36%), Postives = 160/193 (82.90%), Query Frame = 1
BLAST of Lsi09G007990 vs. Swiss-Prot
Match: NQR1_ORYSJ (Probable NADPH:quinone oxidoreductase 1 OS=Oryza sativa subsp. japonica GN=Os01g0953600 PE=2 SV=1) HSP 1 Score: 245.7 bits (626), Expect = 4.2e-64 Identity = 122/189 (64.55%), Postives = 150/189 (79.37%), Query Frame = 1
BLAST of Lsi09G007990 vs. Swiss-Prot
Match: FMNRE_PSEAE (NAD(P)H-dependent FMN reductase PA1204 OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=PA1204 PE=1 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 7.8e-34 Identity = 84/188 (44.68%), Postives = 117/188 (62.23%), Query Frame = 1
BLAST of Lsi09G007990 vs. TrEMBL
Match: A0A0A0KNE1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G435080 PE=4 SV=1) HSP 1 Score: 365.9 bits (938), Expect = 3.1e-98 Identity = 188/201 (93.53%), Postives = 196/201 (97.51%), Query Frame = 1
BLAST of Lsi09G007990 vs. TrEMBL
Match: V4SDM2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002554mg PE=4 SV=1) HSP 1 Score: 308.1 bits (788), Expect = 7.7e-81 Identity = 148/190 (77.89%), Postives = 171/190 (90.00%), Query Frame = 1
BLAST of Lsi09G007990 vs. TrEMBL
Match: A0A0J8CYB1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g041680 PE=4 SV=1) HSP 1 Score: 298.5 bits (763), Expect = 6.1e-78 Identity = 143/189 (75.66%), Postives = 167/189 (88.36%), Query Frame = 1
BLAST of Lsi09G007990 vs. TrEMBL
Match: D7TX98_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0084g00850 PE=4 SV=1) HSP 1 Score: 297.4 bits (760), Expect = 1.4e-77 Identity = 144/189 (76.19%), Postives = 167/189 (88.36%), Query Frame = 1
BLAST of Lsi09G007990 vs. TrEMBL
Match: M5XKT0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011741mg PE=4 SV=1) HSP 1 Score: 297.0 bits (759), Expect = 1.8e-77 Identity = 147/198 (74.24%), Postives = 173/198 (87.37%), Query Frame = 1
BLAST of Lsi09G007990 vs. TAIR10
Match: AT3G27890.1 (AT3G27890.1 NADPH:quinone oxidoreductase) HSP 1 Score: 285.8 bits (730), Expect = 2.1e-77 Identity = 139/189 (73.54%), Postives = 165/189 (87.30%), Query Frame = 1
BLAST of Lsi09G007990 vs. NCBI nr
Match: gi|449445053|ref|XP_004140288.1| (PREDICTED: NAD(P)H:quinone oxidoreductase [Cucumis sativus]) HSP 1 Score: 365.9 bits (938), Expect = 4.5e-98 Identity = 188/201 (93.53%), Postives = 196/201 (97.51%), Query Frame = 1
BLAST of Lsi09G007990 vs. NCBI nr
Match: gi|659072493|ref|XP_008465837.1| (PREDICTED: NAD(P)H:quinone oxidoreductase [Cucumis melo]) HSP 1 Score: 362.5 bits (929), Expect = 5.0e-97 Identity = 186/200 (93.00%), Postives = 194/200 (97.00%), Query Frame = 1
BLAST of Lsi09G007990 vs. NCBI nr
Match: gi|567879769|ref|XP_006432443.1| (hypothetical protein CICLE_v10002554mg [Citrus clementina]) HSP 1 Score: 308.1 bits (788), Expect = 1.1e-80 Identity = 148/190 (77.89%), Postives = 171/190 (90.00%), Query Frame = 1
BLAST of Lsi09G007990 vs. NCBI nr
Match: gi|568882520|ref|XP_006494073.1| (PREDICTED: NADPH:quinone oxidoreductase [Citrus sinensis]) HSP 1 Score: 306.2 bits (783), Expect = 4.2e-80 Identity = 149/190 (78.42%), Postives = 169/190 (88.95%), Query Frame = 1
BLAST of Lsi09G007990 vs. NCBI nr
Match: gi|645251442|ref|XP_008231680.1| (PREDICTED: NADPH:quinone oxidoreductase-like [Prunus mume]) HSP 1 Score: 301.6 bits (771), Expect = 1.0e-78 Identity = 148/198 (74.75%), Postives = 175/198 (88.38%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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