Lsi09G007680 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi09G007680
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Haloacid dehalogenase-like hydrolase
Location	chr09 : 8766530 .. 8772939 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGTGATGTTTAATTAATTTCTTTTTATATTATTCCCTAAACCCATTCTTTTCACCATATGAAATATTGCATGCTTGGGGAATATATTTCCAATAATGTTCATTTTCATGGTCTTTGGAATCATATATCTACTTCCATGATCAACTAGTATCTTCTTTCATCAAACCAACTTCAAATCTATATAACTAGAAAGCATGGGTTATTTTGAGCCAACATTAATCCATTTCCATAGAGGTCTTTATTCTTGCCTCACTCGTTCGATTATAACACGAGCATTGGTTGGCCTCGTTCGAGTCCAAGTTTTAATCGTCATCTCTCTGATCTTATTGTAATTTTTTTCCCTTACAGGTAGTTTTGTAATAGATGGATGCTGTTAACATGTCCAATGGAAGCTCCAAATATGAGTGTTTGTTATTTGGTATAATTAATACATATACACTGTTAGAGTATTAAATATTATTTGTTACAGTATTTTATATTATGTTATGTTATTTAAAGATATTTTCAATATTACTTTTGAGTGTAGCTGGAAACTCTAATCTAATGATCATTGCAACTTTCATCTATCTCTCAATCTCTCTATTATTTCTTTTGATACACATGCATAAAGGAGATGATATGAAATTATAATATATAATATGTTGAGAGACCTTGTTTAATAAAGTTGATAAATTTGTGTATACAGATATGGATGATACTTTGTACCCTAGAAGTTGTGGAATTAACCTAGCATGTCGTAAGAAAATTGAAGGTAACATACATAATTTTAATGTTAGTAAAAAACACATATAATGTTGTTTTTAAATATAAAAAAAATGAGCCAAACTATTTATAAATATAGAAAAATTTTACTGTGATAGACCGCGATATAGTTCTATTGCTTGAGTGATAGATAACAATAGAATTCTATCGTTGTCTAAGTGAAATTTTTCTATATTTGTAAATAGTTTTATATTTTTCAATTTCTTTAAAATTAAAGTCATACTATATATGAATTAATATTATTCTTGTTGTTTTGATAATAATAAATGCAGAGTTTATGTTGAAGTATTTGCATATGGATGAAAGTGAAGTGCCTCAAATGTGCTTCGACTTATACATGGAATATGGGACAACCATGGCTGGACTTAAGGTGAGGCTTTTAATAGTAACCATCCGTTGTAGCTTCAACCGAGTCCTTATTTAGGGTTAGGGTTTGTTTGATAGTGTTCGTTTCTCATTTTTTAATAAATAAACTTGTTTGATAATCATTTTCGTATTCCGTATTTTTAAATTTGAAAAAATGTTTAGAGCCAAATTTGATGTAGTTTCTCAAAATTTTGTTTCAGTTTTTTTTCTTTTCTCTTTTTCTTACATCTATCCATATATTTCTCTCTCCACCTCCCATTTTACTCTCTCTCCCATCTCCCATCCCATCTCTCATATCTCTAGAGATGTCTACGAGGCAGGATGGGAGGGGGACAGGGAAGGCTTCCTCGTCCCCATCCCCACTCCCTATTTTAATCTTTATCTCTGTGAAATTCTTTACGGGGATTGGGGCGAGGATTCCTCGTAAGGAATATGCGGGGATCGGGTTCCGTGCGGGAAAAAATTCTACGCTTTTTTAATTTATTATTTCTTTAACTATTTGTTTTAATTTATTCTCAACTAAATAAAAGTTTTAAATTTTTCTATATTAAGTGAGTCATTTCGTTATAAAATCTTTTGCTAAAAATAATAATATTTAATGTGAACGTGTAAAAAATATAATTAAAATGTATAGTTTCTAAAATTTCTCAAATTTAAAATTAAATATTATTCAAGTCTTCGACTTAAAGTCTATATATGTGTGTGTGTTTTTTTATATAAAAGTAAATATAATTATAAATACACACGTTAAGCTTTTGTGTGTATATATATATAAGAATTTTTTTTAGGTGTGTATATATATATATATAGGGTAGGGTCAGGGATGAAGATGGAGAATATAATCCCGTCCCCGTCCCCGTTTAGCCATCGGGGAGAAAAGTCTCCCTGCTCCCTCCCTCCTTCATTCCCCGTCTAATTGGGATTCCTCGCTGGTTAAATGAACATCTCTACCTATCTCTTTATTCTATCCTAATTCTTTTTTCTTATTTTTATAAAGTATTTTTTTTCTTTATAATACTCCACTATACTTTTTTAAGTTTTGCTTTTTTTTTTATCTTCTTTTTAAACCTCTTATTTCTTTTTTCTCAATTTTGGTAGGATTTTAGTTTCTTTTTAGGATTGTTTTCAAATATATAGAAAAACGAGTCAAACTATTTACAAATATAAAAAAATTTCACTGCGATAGAAGTCTATCGCAGTCTATATAAATAGTAACTTTTTCTATATTTATAAATAGTTTGATATTTTTTCATATAATAATTTTCCTTCTTTTTACTAAATAAATAAGTCAATTATCACTAATTTTTTTAAAAATAAATCGCCCTTCTATTTTTTGGATTTTGTTTATGTGTATTTGGTTAATGAGAAACGCATGCATTCTAAAAGGAAAAAGCTAAAAAAAATGAATTAAATAAAGGAAAATTATTACAAATAGAAAAACATCAAACTATTTACAAATATAGAAAAATGTTAGGAAAATTACTATAAACAGAAAAAATATCAAACTATTTACAAATATAGAAAAATTTCATTGTCTATCCGTGATAGACTGCGATAGAATTCTATCGTTTTCTATCGCTCAAACAATAGCGATAGAAAGTGATAAGATAGACAGTACAATTTTTCTATATTTGTAAATAGTTTGGCTCATTTTTCTATATTTCAAAAGAGCCCAAAATGTTACTATTTATCAGCGATAGACCGTAACAGACTTCTATTGCTTGAGCGATAGAAGTCTATCACTGATAGACAGTAAATTTTTTTCTATATTTGTAAATAGTTTGACTCATTTTTTTATATTTGAAAACAACTCTTTATTATGCTGTATGTAACAAAAAGAAAAATAGTTATAAAATGCATCTATTTCTCACATAACACTTTTTTTTCATGAATAAGAAACAACCACAAACATGTTTTTATTTATAGTTTAAACAAAAAAAAAAAAAAACGTGAAACGTTATCAAACGAGAGTTTGACAGGTTGAATTTAAATAATGATGTGAGTGATATTTTTTTGCAGGCTCTTGGTTATGAATTTGACGATGACGAATTTCATGCGTATGTGCATGGTAGCTTACCTTACGAGGCATTGGAGCCTGATCCAGTTTTGAGGAACCTCCTCCTTTCCATGCCACAACGCAAAATTGTAAGTAAAGTAGCAAACAAAACAATTAAGAATCGGTTTGGTAGGAAATTCAGATTCTGTTTTATGTTTTTAGATTTAGTGAGTTCAACGAATCTGTATTTGGTAGGCCATTTGGATTTTGTTTTTGAAAACTGTTTTTGGATTTTATAATTCAAACAAATTTGAAAACAATATTTCTTTATGTTTTCTGTATATCCTGATTTTGAGTTTAAAATTTTAAAATGAAGAGTTATATTAGAAAAGATAAAAACAACAATAAATATAGTATTTCATGTTATAAACTCAATTATTTTTATTAAATTAAAACATGTATCATATAATATATTATATGATATTACAAAATAATAATTATACAAAAAATTTAACATGAAACAAGTTCATAAATTAATTAGTAATAATTTATATTCAACCTAATATTTAGTGTCTAACTATTTTCAAATTGTCTATCAAACAAGCCCTAAAACATCGCATAAGATTTCATAATTAAAAAATATCTTTCACTCATGTTGAGGATCTCACATTAAAGAAATTATAATTTTATATAGAAAAAATAACACCTCCCTAATTATTAGGATCTGATACAAGAATGCGGCTAATCCAAAAAGACATTATCTTGAGGAGACATGTTAAAAATTTTATATAGAAAAAATAAAAAACCTCGCAATGTTTATAAATTAAATGGTTTACTTATTTCATGGAAAATTTTTACAAATAGAAAAAATGTCAAACTATTTACAGAAAATGGTAAAAGAAAAACATTGATAGACATTGATCGACTTCTATGAGCATCTATTAGTGATAAACTTCTATCATTTCTATTCTTGATAAACCCTTATAGACTTCTATCAGCGTCTATCACAACTATCTAAAAATTTTGCTATTTTGTGTAAATAATTTCCTTTATTTTTCTATTTTTAAAATTTTTCCTTATTTCATTATAATTATATTTTTGAGATGAAATCTCATATTTTTCTAATAACTCGCATACTAATTATTACCTTGAATTGGATGCAGATCTTCACTAATGCTGACAAAGCCCACGCAGCTCAAGTTTTACAAAGGTTGGATTTGGAAGATTGTTTTGAGGGTGTCATATGCTTTGAAACTCTTAATAATAACCCATCATTAGAAAGAAAATGTAATGGCAATGGTATTATTCTCTGCAAGCCATCCATTGAAGCCATCGAAGCTGCTATCAAAATTGCTGATACTCACCCCAATAAAACGGTAACAAAACCAAACCATCATTTTTTTTTTTTTTTTTTTTTTTTTTTTCCTTTTTCCATGAAACAGCCGCGGATCCAATTAAGGTCCGAGGGCTCGAACTCCCCTTAAATTTTTAGATTTATATCCGAACAATACTAGATGCATATATCTTTATGCATTCCACTCTCGTCACACATAAGAAAAAGAATTAAAATATTTTTTAAAAAAAGGTAAGAAGAATTGTAGTATGTATCAAATTATGATTAGATAATTAGTGGGATGAACAAAAATAGGTATTGCCCGTGATGAGTCTAAGTATTTTTTCTTTATAATAGAATGGTGGTAAAATTGCTCAAAGTCCCGACTTAATTCTATGTCAACGACGTTAGCTCCTTTATTTTGCATTTTTGCAAAAAAGAAAGAAAAAAAAGTGTATTATGGACTGTACTCATAAAATTTTTATCATGTGACAAACTGTGATTGAAGGATTGGGTGGATAGTAAAAATATGGGTGTAGTCTGAAATGCACCAAAGTATTACTCTTTCCTTCTACACTGTACCTCATGTAAAAAAAATAATAAATCTAAATAATTGTGCCTCCTTAAAAGAGAAATAGGTCTCCCTCTCCATATCTCTACTAGCATAAGGTTTGTACGGTCAACTTCGATGTAAGATGTTCGATTTTTCCACCCGCATATTGTAAAAAAAAAAAAAAAAAAAGAAAAGAAAAGAAGAGGTGGGTCTCTCTCCCCAAATCCTTTTGATTTTTAAATTTTTCTTTTGCTGTTTAAATTAATGTCAATCTCTTATTATTAATAATTTTCTAAATTTTTTTATTAGAGTAAATGTCAATTTATTTCCAACTTTGGACTCGTAGCAATTAAAACTCTAAACTAATATTTTATCAGTTAAATTCTAAACTTTCATATAGATGAATCAATTTAGATTTGTGATTTCTTTTGAAAAGCGTTTATGTTCCAATTCTAATAGATACGTTTAAACCTCTTCCAAAGTTTAGGATATAAATTAATATATTTAAACATTTTTTTCCTTTTTATGTCTGGAATTATATCTCTTTTTTCTTTTCTTTTAATTAATGTCTTATTCTTTACGTTAAACTTGAATATCTTAATTCGGTGGAATTGATCCATAATTTCAGTTAATCTATGAATTTTTTGAATTATTGACATTGCAAATTATTCATTAAAATGTCTTGCAATTTGTCATATGACGTTTCGAATGACCAAGCATAGAGTCTTGAATTTTACCCTACGTGCATATTATCTCTATATTTTATACTCTGTTTTCTTTAAGATAATAAAACTATTTATCCTTTCTGTCCATAGACGTAGCTAACACACTATTAGTGAATAACATAAATCTGTTTGTCGTTTTTTTTCTTGTTCTTTACTCTTTCCTCATCGATTTATTTATTTCACAACATTAATTTTACTAAATTTTAAGATAAGCCCCTAAACAAAATTAGAATAATCCTTCATTATTAACTTTTCCTTTTCCATCCCCAGATCTTTTTCGATGACAGTGTTCGAAATATCGAGAGCGGAAAAGCAGCAGGCCTTCATACAGTTATAGTAAGTATATTATTTTTGTTTTGGCCTTTATCATTTCTTCAATGTCGTCCTAAAGATAGAGGACTCGTTACTGCAGGTTGGAAGCTCGGAGTTGGTCCCCGGAGCCGACCATGCCTTAGGTAGCATCCACAATATAGAAGAAGCATTGCCAGAGTTATGGAAAGATGAAGACAACGACGATAACGACGATCAGCCTGAGCAAGCTATGCAGGCCCCTGTAGTTGAAAGTATGGTCCCTGCATAGTTTATGGGGCACTTCTTAAGATGAATGCATAGATCATAGTTATTGGCATTATAAAACAAAATAAGTTAACATGGAAAACCTTTGTGTTCTT

mRNA sequence

ATGAATGCTCTTGGTTATGAATTTGACGATGACGAATTTCATGCGTATGTGCATGGTAGCTTACCTTACGAGGCATTGGAGCCTGATCCAATCTTTTTCGATGACAGTGTTCGAAATATCGAGAGCGGAAAAGCAGCAGGCCTTCATACAGTTATAGTTGGAAGCTCGGAGTTGGTCCCCGGAGCCGACCATGCCTTAGGTAGCATCCACAATATAGAAGAAGCATTGCCAGAGTTATGGAAAGATGAAGACAACGACGATAACGACGATCAGCCTGAGCAAGCTATGCAGGCCCCTGTAGTTGAAAGTATGGTCCCTGCATAGTTTATGGGGCACTTCTTAAGATGAATGCATAGATCATAGTTATTGGCATTATAAAACAAAATAAGTTAACATGGAAAACCTTTGTGTTCTT

Coding sequence (CDS)

ATGAATGCTCTTGGTTATGAATTTGACGATGACGAATTTCATGCGTATGTGCATGGTAGCTTACCTTACGAGGCATTGGAGCCTGATCCAATCTTTTTCGATGACAGTGTTCGAAATATCGAGAGCGGAAAAGCAGCAGGCCTTCATACAGTTATAGTTGGAAGCTCGGAGTTGGTCCCCGGAGCCGACCATGCCTTAGGTAGCATCCACAATATAGAAGAAGCATTGCCAGAGTTATGGAAAGATGAAGACAACGACGATAACGACGATCAGCCTGAGCAAGCTATGCAGGCCCCTGTAGTTGAAAGTATGGTCCCTGCATAG

Protein sequence

MNALGYEFDDDEFHAYVHGSLPYEALEPDPIFFDDSVRNIESGKAAGLHTVIVGSSELVPGADHALGSIHNIEEALPELWKDEDNDDNDDQPEQAMQAPVVESMVPA

Homology

[Close]

BLAST of Lsi09G007680 vs. TrEMBL
Match: A0A0A0KJ84_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G128280 PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.1e-22
Identity = 60/75 (80.00%), Postives = 66/75 (88.00%), Query Frame = 1


Query: 31  IFFDDSVRNIESGKAAGLHTVIVGSSELVPGADHALGSIHNIEEALPELWKDEDNDDNDD 90
           IFFDDSVRN+E+GKAAGLHTVI     LVPGADHALGSIHNI+EALPELW+DE   D +D
Sbjct: 121 IFFDDSVRNMENGKAAGLHTVI-----LVPGADHALGSIHNIKEALPELWEDE---DEND 180

Query: 91  QPEQAMQAPVVESMV 106
           QPEQAMQAPVVE+MV
Sbjct: 181 QPEQAMQAPVVETMV 187

[Close]

BLAST of Lsi09G007680 vs. TrEMBL
Match: F6HZF0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g02420 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.5e-19
Identity = 54/77 (70.13%), Postives = 63/77 (81.82%), Query Frame = 1


Query: 31  IFFDDSVRNIESGKAAGLHTVIVGSSELVPGADHALGSIHNIEEALPELWKDEDNDDNDD 90
           IFFDDS RNI SGKAAGLHTVIVGSS LVPGADHALGSIHNI+EALPE+W+ E+     +
Sbjct: 215 IFFDDSARNITSGKAAGLHTVIVGSSVLVPGADHALGSIHNIKEALPEIWEGEEG----E 274

Query: 91  QPEQAMQAPVVESMVPA 108
           Q EQ +Q+  VE++V A
Sbjct: 275 QLEQVIQSTAVETVVLA 287

[Close]

BLAST of Lsi09G007680 vs. TrEMBL
Match: A0A0J8CER1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g102470 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 4.4e-19
Identity = 52/77 (67.53%), Postives = 63/77 (81.82%), Query Frame = 1


Query: 31  IFFDDSVRNIESGKAAGLHTVIVGSSELVPGADHALGSIHNIEEALPELWKDEDNDDNDD 90
           IFFDDSVRNI SGKAAGLHTVIVG SEL+PGAD+AL SIHN++EALPE+W+DE  + +D 
Sbjct: 183 IFFDDSVRNIASGKAAGLHTVIVGKSELIPGADYALRSIHNMKEALPEIWEDEAKEHHD- 242

Query: 91  QPEQAMQAPVVESMVPA 108
              Q +Q+  VE+MV A
Sbjct: 243 ---QVLQSNAVETMVRA 255

[Close]

BLAST of Lsi09G007680 vs. TrEMBL
Match: A0A151SS69_CAJCA (Uncharacterized protein C24B11.05 OS=Cajanus cajan GN=KK1_003873 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 9.9e-19
Identity = 51/77 (66.23%), Postives = 61/77 (79.22%), Query Frame = 1


Query: 31  IFFDDSVRNIESGKAAGLHTVIVGSSELVPGADHALGSIHNIEEALPELWKDEDNDDNDD 90
           IFFDDSVRN+ES K AGLHTV+VG S+LVPGADHAL SIHNI+EALPE+W+ E+ +    
Sbjct: 200 IFFDDSVRNVESAKLAGLHTVLVGHSDLVPGADHALNSIHNIKEALPEIWEIEEANQ--- 259

Query: 91  QPEQAMQAPVVESMVPA 108
             +Q MQ P VE+MV A
Sbjct: 260 --QQKMQPPAVETMVQA 271

[Close]

BLAST of Lsi09G007680 vs. TrEMBL
Match: A0A0D2LYY9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G148700 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.7e-18
Identity = 52/77 (67.53%), Postives = 62/77 (80.52%), Query Frame = 1


Query: 31  IFFDDSVRNIESGKAAGLHTVIVGSSELVPGADHALGSIHNIEEALPELWKDEDNDDNDD 90
           IFFDDS RNI SGKAAGLHTVIVG+S LVPGADHAL SIHNI+EA+PE+W     D +++
Sbjct: 200 IFFDDSARNIASGKAAGLHTVIVGNSALVPGADHALRSIHNIKEAIPEIW-----DGDEE 259

Query: 91  QPEQAMQAPVVESMVPA 108
           Q EQ +QA  VE++V A
Sbjct: 260 QMEQVIQAAAVETVVLA 271

[Close]

BLAST of Lsi09G007680 vs. TAIR10
Match: AT3G62040.1 (AT3G62040.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein)

HSP 1 Score: 85.9 bits (211), Expect = 1.7e-17
Identity = 45/77 (58.44%), Postives = 56/77 (72.73%), Query Frame = 1


Query: 31  IFFDDSVRNIESGKAAGLHTVIVGSSELVPGADHALGSIHNIEEALPELWKDEDNDDNDD 90
           IFFDDS+RNI S KA GL TV VG S LVPGAD+AL SIHNI+EA+P+LW+    D+ D+
Sbjct: 177 IFFDDSIRNIASAKATGLKTVFVGESVLVPGADYALSSIHNIKEAIPDLWE----DNKDE 236

Query: 91  QPEQAMQAPVVESMVPA 108
           + E  +Q   V +MV A
Sbjct: 237 KLEPIVQQAAVATMVNA 249

[Close]

BLAST of Lsi09G007680 vs. TAIR10
Match: AT5G59490.1 (AT5G59490.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein)

HSP 1 Score: 77.0 bits (188), Expect = 7.7e-15
Identity = 38/75 (50.67%), Postives = 54/75 (72.00%), Query Frame = 1


Query: 31  IFFDDSVRNIESGKAAGLHTVIVGSSELVPGADHALGSIHNIEEALPELWKDE-DNDDND 90
           +FFDDS RNI++GKA GLHTV+VG SE + G+D+AL SIHN++EA PELW +   N+   
Sbjct: 190 LFFDDSTRNIQTGKAVGLHTVLVGKSEKIDGSDYALESIHNMKEAFPELWSESIINNKET 249

Query: 91  DQPEQAMQAPVVESM 105
           ++ + A Q  +  S+
Sbjct: 250 ERIDYASQISIETSV 264

[Close]

BLAST of Lsi09G007680 vs. TAIR10
Match: AT5G02230.1 (AT5G02230.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein)

HSP 1 Score: 73.9 bits (180), Expect = 6.5e-14
Identity = 31/53 (58.49%), Postives = 45/53 (84.91%), Query Frame = 1


Query: 31  IFFDDSVRNIESGKAAGLHTVIVGSSELVPGADHALGSIHNIEEALPELWKDE 84
           +FF+DSVRN+++GK  GL+TV+VG S  V GAD+AL +IHN++EA+PELW+ +
Sbjct: 208 LFFEDSVRNVQAGKRVGLYTVLVGKSTKVKGADYALENIHNMKEAIPELWESD 260

[Close]

BLAST of Lsi09G007680 vs. TAIR10
Match: AT5G59480.1 (AT5G59480.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein)

HSP 1 Score: 67.4 bits (163), Expect = 6.1e-12
Identity = 34/64 (53.12%), Postives = 43/64 (67.19%), Query Frame = 1


Query: 31  IFFDDSVRNIESGKAAGLHTVIVGSSELVPGADHALGSIHNIEEALPELWKDEDNDDNDD 90
           +FFDDS+RNI++GK  GLHTV VG+S    G D AL  IHNI EALP+LW   D+   + 
Sbjct: 211 LFFDDSIRNIQTGKRVGLHTVWVGTSHREEGVDIALEHIHNIREALPQLWDAVDDKAKEI 270

Query: 91  QPEQ 95
           +  Q
Sbjct: 271 RTRQ 274

[Close]

BLAST of Lsi09G007680 vs. TAIR10
Match: AT2G32150.1 (AT2G32150.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein)

HSP 1 Score: 54.3 bits (129), Expect = 5.4e-08
Identity = 21/50 (42.00%), Postives = 35/50 (70.00%), Query Frame = 1


Query: 31  IFFDDSVRNIESGKAAGLHTVIVGSSELVPGADHALGSIHNIEEALPELW 81
           +F DD++ NI +GK+ GL T++VG +E    AD+A+ ++  I  A+PE+W
Sbjct: 180 VFLDDNIHNITAGKSVGLRTILVGRAEKTKDADYAVETVTEIATAVPEIW 229

[Close]

BLAST of Lsi09G007680 vs. NCBI nr
Match: gi|778698550|ref|XP_011654559.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein C24B11.05 [Cucumis sativus])

HSP 1 Score: 126.7 bits (317), Expect = 2.4e-26
Identity = 64/75 (85.33%), Postives = 70/75 (93.33%), Query Frame = 1


Query: 31  IFFDDSVRNIESGKAAGLHTVIVGSSELVPGADHALGSIHNIEEALPELWKDEDNDDNDD 90
           IFFDDSVRN+E+GKAAGLHTVIVGS ELVPGADHALGSIHNI+EALPELW+DE   D +D
Sbjct: 191 IFFDDSVRNMENGKAAGLHTVIVGSXELVPGADHALGSIHNIKEALPELWEDE---DEND 250

Query: 91  QPEQAMQAPVVESMV 106
           QPEQAMQAPVVE+MV
Sbjct: 251 QPEQAMQAPVVETMV 262

[Close]

BLAST of Lsi09G007680 vs. NCBI nr
Match: gi|659074583|ref|XP_008437682.1| (PREDICTED: uncharacterized protein C24B11.05 [Cucumis melo])

HSP 1 Score: 126.3 bits (316), Expect = 3.1e-26
Identity = 65/75 (86.67%), Postives = 70/75 (93.33%), Query Frame = 1


Query: 31  IFFDDSVRNIESGKAAGLHTVIVGSSELVPGADHALGSIHNIEEALPELWKDEDNDDNDD 90
           IFFDDSVRNIESGKAAGLHTVIVGS ELVPGADHALGSIHNI+EALPELW+ E  +D +D
Sbjct: 173 IFFDDSVRNIESGKAAGLHTVIVGSWELVPGADHALGSIHNIKEALPELWEGE--EDEND 232

Query: 91  QPEQAMQAPVVESMV 106
           QPEQAMQAPVVE+MV
Sbjct: 233 QPEQAMQAPVVETMV 245

[Close]

BLAST of Lsi09G007680 vs. NCBI nr
Match: gi|700194613|gb|KGN49790.1| (hypothetical protein Csa_5G128280 [Cucumis sativus])

HSP 1 Score: 114.0 bits (284), Expect = 1.6e-22
Identity = 60/75 (80.00%), Postives = 66/75 (88.00%), Query Frame = 1


Query: 31  IFFDDSVRNIESGKAAGLHTVIVGSSELVPGADHALGSIHNIEEALPELWKDEDNDDNDD 90
           IFFDDSVRN+E+GKAAGLHTVI     LVPGADHALGSIHNI+EALPELW+DE   D +D
Sbjct: 121 IFFDDSVRNMENGKAAGLHTVI-----LVPGADHALGSIHNIKEALPELWEDE---DEND 180

Query: 91  QPEQAMQAPVVESMV 106
           QPEQAMQAPVVE+MV
Sbjct: 181 QPEQAMQAPVVETMV 187

[Close]

BLAST of Lsi09G007680 vs. NCBI nr
Match: gi|297744067|emb|CBI37037.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 103.6 bits (257), Expect = 2.2e-19
Identity = 54/77 (70.13%), Postives = 63/77 (81.82%), Query Frame = 1


Query: 31  IFFDDSVRNIESGKAAGLHTVIVGSSELVPGADHALGSIHNIEEALPELWKDEDNDDNDD 90
           IFFDDS RNI SGKAAGLHTVIVGSS LVPGADHALGSIHNI+EALPE+W+ E+     +
Sbjct: 230 IFFDDSARNITSGKAAGLHTVIVGSSVLVPGADHALGSIHNIKEALPEIWEGEEG----E 289

Query: 91  QPEQAMQAPVVESMVPA 108
           Q EQ +Q+  VE++V A
Sbjct: 290 QLEQVIQSTAVETVVLA 302

[Close]

BLAST of Lsi09G007680 vs. NCBI nr
Match: gi|747042020|ref|XP_011076255.1| (PREDICTED: uncharacterized protein C24B11.05 [Sesamum indicum])

HSP 1 Score: 103.6 bits (257), Expect = 2.2e-19
Identity = 54/77 (70.13%), Postives = 62/77 (80.52%), Query Frame = 1


Query: 31  IFFDDSVRNIESGKAAGLHTVIVGSSELVPGADHALGSIHNIEEALPELWKDEDNDDNDD 90
           IFFDDSVRNI +GKAAGLHTVIVG S LVPGADHAL SIHNI EALPE+W+DE      +
Sbjct: 205 IFFDDSVRNIANGKAAGLHTVIVGRSTLVPGADHALNSIHNIREALPEIWEDE-----GE 264

Query: 91  QPEQAMQAPVVESMVPA 108
             EQ +Q+PVVE++V A
Sbjct: 265 HLEQIIQSPVVETVVRA 276

The following BLAST results are available for this feature:

BLAST of Lsi09G007680 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi09G007680 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJ84_CUCSA	1.1e-22	80.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G128280 PE=4 SV=1	[more]
F6HZF0_VITVI	1.5e-19	70.13	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g02420 PE=4 SV=...	[more]
A0A0J8CER1_BETVU	4.4e-19	67.53	Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g102470 PE=4 S...	[more]
A0A151SS69_CAJCA	9.9e-19	66.23	Uncharacterized protein C24B11.05 OS=Cajanus cajan GN=KK1_003873 PE=4 SV=1	[more]
A0A0D2LYY9_GOSRA	1.7e-18	67.53	Uncharacterized protein OS=Gossypium raimondii GN=B456_001G148700 PE=4 SV=1	[more]

BLAST of Lsi09G007680 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G62040.1	1.7e-17	58.44	Haloacid dehalogenase-like hydrolase (HAD) superfamily protein	[more]
AT5G59490.1	7.7e-15	50.67	Haloacid dehalogenase-like hydrolase (HAD) superfamily protein	[more]
AT5G02230.1	6.5e-14	58.49	Haloacid dehalogenase-like hydrolase (HAD) superfamily protein	[more]
AT5G59480.1	6.1e-12	53.13	Haloacid dehalogenase-like hydrolase (HAD) superfamily protein	[more]
AT2G32150.1	5.4e-08	42.00	Haloacid dehalogenase-like hydrolase (HAD) superfamily protein	[more]

BLAST of Lsi09G007680 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778698550\|ref\|XP_011654559.1\|	2.4e-26	85.33	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein C24B11.05 [Cucumis sativ...	[more]
gi\|659074583\|ref\|XP_008437682.1\|	3.1e-26	86.67	PREDICTED: uncharacterized protein C24B11.05 [Cucumis melo]	[more]
gi\|700194613\|gb\|KGN49790.1\|	1.6e-22	80.00	hypothetical protein Csa_5G128280 [Cucumis sativus]	[more]
gi\|297744067\|emb\|CBI37037.3\|	2.2e-19	70.13	unnamed protein product [Vitis vinifera]	[more]
gi\|747042020\|ref\|XP_011076255.1\|	2.2e-19	70.13	PREDICTED: uncharacterized protein C24B11.05 [Sesamum indicum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR023214	HAD_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016787	hydrolase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G007680.1	Lsi09G007680.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023214	HAD-like domain	GENE3D	G3DSA:3.40.50.1000		coord: 31..81 score: 1.
IPR023214	HAD-like domain	unknown	SSF56784	HAD-like	coord: 31..81 score: 1.4
None	No IPR available	PANTHER	PTHR12725	HALOACID DEHALOGENASE-LIKE HYDROLASE	coord: 31..107 score: 1.7
None	No IPR available	PANTHER	PTHR12725:SF49	SUBFAMILY NOT NAMED	coord: 31..107 score: 1.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi09G007680	MELO3C005187.2	Melon (DHL92) v3.6.1	lsimedB014
Lsi09G007680	Cla97C01G007630	Watermelon (97103) v2	lsiwmbB007
Lsi09G007680	Bhi12G000912	Wax gourd	lsiwgoB006
Lsi09G007680	Cp4.1LG01g18830	Cucurbita pepo (Zucchini)	cpelsiB311
Lsi09G007680	CsGy5G012550	Cucumber (Gy14) v2	cgyblsiB295
Lsi09G007680	Carg17716	Silver-seed gourd	carlsiB433
Lsi09G007680	CsaV3_5G018660	Cucumber (Chinese Long) v3	cuclsiB346

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi09G007680	Cucumber (Gy14) v1	cgylsiB605
Lsi09G007680	Cucurbita maxima (Rimu)	cmalsiB268
Lsi09G007680	Cucurbita maxima (Rimu)	cmalsiB622
Lsi09G007680	Cucurbita moschata (Rifu)	cmolsiB256
Lsi09G007680	Cucurbita moschata (Rifu)	cmolsiB610
Lsi09G007680	Cucurbita pepo (Zucchini)	cpelsiB130
Lsi09G007680	Wild cucumber (PI 183967)	cpilsiB323
Lsi09G007680	Cucumber (Chinese Long) v2	culsiB323
Lsi09G007680	Melon (DHL92) v3.5.1	lsimeB013
Lsi09G007680	Watermelon (Charleston Gray)	lsiwcgB008
Lsi09G007680	Watermelon (97103) v1	lsiwmB028
Lsi09G007680	Silver-seed gourd	carlsiB754