Lsi09G007640 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi09G007640
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionEndochitinase (Chitinase)
Locationchr09 : 8733104 .. 8733571 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATCCAAAATAATCTTGTTCCTCTCCTTCATCTTCTTCTTTGGAATGGGCCTCCCGTCGATGACGGAGGGTCACGGTCGTCGGGGGAGGAAATCTCGGGTATCTTCTCTAGTTAGTGAAGAACTTTTTAAGACGCTATTTTTGCATAAAGACGATAGCGCATGCCCGGCGAATGGATTCTATAGTTATCAAGCTTTTATTGAAGCAACGAAGAGGTTCCCTAAATTTGGTGCGACGGGTTGTTTGGCCACACGGAAGAGGGAGATAGCGGCGTTTTTGGCTCAAATTTCGCACGAGACGACGGGTGGGTGGGCGACTGCTCCGGATGGACCTTTTGCTTGGGGGCTGTGCTTCAAAGAGGAAATTAGTCCACAAAGCAACTATTGTGATGATAGTGCTAAGCAGTGGCCTTGCTATCCAGGCAAGTCCTACAAAGGAAGAGGGCCTATTCAACTGTCATGGTAA

mRNA sequence

ATGGCATCCAAAATAATCTTGTTCCTCTCCTTCATCTTCTTCTTTGGAATGGGCCTCCCGTCGATGACGGAGGGTCACGGTCGTCGGGGGAGGAAATCTCGGGTATCTTCTCTAGTTAGTGAAGAACTTTTTAAGACGCTATTTTTGCATAAAGACGATAGCGCATGCCCGGCGAATGGATTCTATAGTTATCAAGCTTTTATTGAAGCAACGAAGAGGTTCCCTAAATTTGGTGCGACGGGTTGTTTGGCCACACGGAAGAGGGAGATAGCGGCGTTTTTGGCTCAAATTTCGCACGAGACGACGGGTGGGTGGGCGACTGCTCCGGATGGACCTTTTGCTTGGGGGCTGTGCTTCAAAGAGGAAATTAGTCCACAAAGCAACTATTGTGATGATAGTGCTAAGCAGTGGCCTTGCTATCCAGGCAAGTCCTACAAAGGAAGAGGGCCTATTCAACTGTCATGGTAA

Coding sequence (CDS)

ATGGCATCCAAAATAATCTTGTTCCTCTCCTTCATCTTCTTCTTTGGAATGGGCCTCCCGTCGATGACGGAGGGTCACGGTCGTCGGGGGAGGAAATCTCGGGTATCTTCTCTAGTTAGTGAAGAACTTTTTAAGACGCTATTTTTGCATAAAGACGATAGCGCATGCCCGGCGAATGGATTCTATAGTTATCAAGCTTTTATTGAAGCAACGAAGAGGTTCCCTAAATTTGGTGCGACGGGTTGTTTGGCCACACGGAAGAGGGAGATAGCGGCGTTTTTGGCTCAAATTTCGCACGAGACGACGGGTGGGTGGGCGACTGCTCCGGATGGACCTTTTGCTTGGGGGCTGTGCTTCAAAGAGGAAATTAGTCCACAAAGCAACTATTGTGATGATAGTGCTAAGCAGTGGCCTTGCTATCCAGGCAAGTCCTACAAAGGAAGAGGGCCTATTCAACTGTCATGGTAA

Protein sequence

MASKIILFLSFIFFFGMGLPSMTEGHGRRGRKSRVSSLVSEELFKTLFLHKDDSACPANGFYSYQAFIEATKRFPKFGATGCLATRKREIAAFLAQISHETTGGWATAPDGPFAWGLCFKEEISPQSNYCDDSAKQWPCYPGKSYKGRGPIQLSW
Homology
[Close]
BLAST of Lsi09G007640 vs. Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 6.5e-57
Identity = 95/131 (72.52%), Postives = 111/131 (84.73%), Query Frame = 1 

Query: 25  GHGRRGRKSRVSSLVSEELFKTLFLHKDDSACPANGFYSYQAFIEATKRFPKFGATGCLA 84
           G G     S VSS+VSE+L+ +LFLHKDD+ACPA GFY+Y +F+ A  RFP+F ATGC  
Sbjct: 39  GGGYSPSPSPVSSIVSEQLYASLFLHKDDAACPARGFYTYASFVRAATRFPRFAATGCAD 98

Query: 85  TRKREIAAFLAQISHETTGGWATAPDGPFAWGLCFKEEISPQSNYCDDSAKQWPCYPGKS 144
            RKRE+AAFLAQISHETTGGWATAPDGP+AWGLC+KEEI+PQS+YCD + KQWPCYPGKS
Sbjct: 99  ARKREVAAFLAQISHETTGGWATAPDGPYAWGLCYKEEINPQSSYCDATDKQWPCYPGKS 158

Query: 145 YKGRGPIQLSW 156
           Y GRGPIQ+SW
Sbjct: 159 YHGRGPIQISW 169

[Close]
BLAST of Lsi09G007640 vs. Swiss-Prot
Match: CHI2_BRANA (Endochitinase CH25 OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 3.7e-44
Identity = 78/126 (61.90%), Postives = 93/126 (73.81%), Query Frame = 1 

Query: 30  GRKSRVSSLVSEELFKTLFLHKDDSACPANGFYSYQAFIEATKRFPKFGATGCLATRKRE 89
           G    +S ++S   F  +  H++D+ACPA GFY+Y AFI A K FP FG TG  ATRK+E
Sbjct: 66  GPTGDLSGIISRSQFDDMLKHRNDNACPARGFYTYDAFINAAKSFPGFGTTGDTATRKKE 125

Query: 90  IAAFLAQISHETTGGWATAPDGPFAWGLCFKEEISPQSNYCDDSAKQWPCYPGKSYKGRG 149
           IAAF  Q SHETTGGWATAPDGP++WG CFK+E +P SNYC  SA +WPC  GKSY GRG
Sbjct: 126 IAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPSSNYCSPSA-EWPCASGKSYYGRG 185

Query: 150 PIQLSW 156
           P+QLSW
Sbjct: 186 PMQLSW 190

[Close]
BLAST of Lsi09G007640 vs. Swiss-Prot
Match: CHIA_SECCE (Basic endochitinase A OS=Secale cereale GN=rsca PE=1 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 8.3e-44
Identity = 82/120 (68.33%), Postives = 90/120 (75.00%), Query Frame = 1 

Query: 35  VSSLVSEELFKTLFLHKDDSACPANGFYSYQAFIEATKRFPKFGATGCLATRKREIAAFL 94
           VSS+VS  LF  + LH++D AC A GFY+Y AF+ A   FP FG TG   TRKRE+AAFL
Sbjct: 80  VSSIVSRALFDRMLLHRNDGACQAKGFYTYDAFVAAAGAFPGFGTTGSTDTRKREVAAFL 139

Query: 95  AQISHETTGGWATAPDGPFAWGLCFKEEISPQSNYCDDSAKQWPCYPGKSYKGRGPIQLS 154
           AQ SHETTGGWATAPDG FAWG CFK+E    SNYC  SA QWPC PGKSY GRGPIQLS
Sbjct: 140 AQTSHETTGGWATAPDGAFAWGYCFKQERGATSNYCTPSA-QWPCAPGKSYYGRGPIQLS 198

[Close]
BLAST of Lsi09G007640 vs. Swiss-Prot
Match: CHI2_ORYSJ (Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 4.1e-43
Identity = 76/121 (62.81%), Postives = 92/121 (76.03%), Query Frame = 1 

Query: 35  VSSLVSEELFKTLFLHKDDSACPANGFYSYQAFIEATKRFPKFGATGCLATRKREIAAFL 94
           V S+V  +LF+ L LH++D ACPA GFY+Y+AF+ A   FP FG TG   TRKRE+AAFL
Sbjct: 89  VGSIVPRDLFERLLLHRNDGACPARGFYTYEAFLAAAAAFPAFGGTGNTETRKREVAAFL 148

Query: 95  AQISHETTGGWATAPDGPFAWGLCFKEEISPQSNYCDDSAKQWPCYPGKSYKGRGPIQLS 154
            Q SHETTGGW TAPDGPF+WG CFK+E +P S+YC  S  +WPC PG+ Y GRGPIQLS
Sbjct: 149 GQTSHETTGGWPTAPDGPFSWGYCFKQEQNPPSDYCQPS-PEWPCAPGRKYYGRGPIQLS 208

Query: 155 W 156
           +
Sbjct: 209 F 208

[Close]
BLAST of Lsi09G007640 vs. Swiss-Prot
Match: CHIB_ARATH (Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3)

HSP 1 Score: 175.3 bits (443), Expect = 5.4e-43
Identity = 77/133 (57.89%), Postives = 94/133 (70.68%), Query Frame = 1 

Query: 23  TEGHGRRGRKSRVSSLVSEELFKTLFLHKDDSACPANGFYSYQAFIEATKRFPKFGATGC 82
           T G    G    +S ++S   F  +  H++D+ACPA GFY+Y AFI A K FP FG TG 
Sbjct: 74  TPGGTPPGPTGDLSGIISSSQFDDMLKHRNDAACPARGFYTYNAFITAAKSFPGFGTTGD 133

Query: 83  LATRKREIAAFLAQISHETTGGWATAPDGPFAWGLCFKEEISPQSNYCDDSAKQWPCYPG 142
            ATRK+E+AAF  Q SHETTGGWATAPDGP++WG CFK+E +P S+YC+ SA  WPC  G
Sbjct: 134 TATRKKEVAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPASDYCEPSA-TWPCASG 193

Query: 143 KSYKGRGPIQLSW 156
           K Y GRGP+QLSW
Sbjct: 194 KRYYGRGPMQLSW 205

[Close]
BLAST of Lsi09G007640 vs. TrEMBL
Match: A0A0A0KPY3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G128240 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 1.3e-72
Identity = 132/155 (85.16%), Postives = 137/155 (88.39%), Query Frame = 1 

Query: 1   MASKIILFLSFIFFFGMGLPSMTEGHGRRGRKSRVSSLVSEELFKTLFLHKDDSACPANG 60
           M SK  LFLSFI F G  LP MTEGH RR +   +SSL+SEELFKTLFLHKDD ACPANG
Sbjct: 1   MTSKF-LFLSFILFLGTSLPLMTEGHRRREKIYGISSLISEELFKTLFLHKDDGACPANG 60

Query: 61  FYSYQAFIEATKRFPKFGATGCLATRKREIAAFLAQISHETTGGWATAPDGPFAWGLCFK 120
           FYSYQAFIEAT RFPKFG TGCLATRKREIAAFLAQISHETTGGWATAP+GPFAWGLCFK
Sbjct: 61  FYSYQAFIEATWRFPKFGTTGCLATRKREIAAFLAQISHETTGGWATAPNGPFAWGLCFK 120

Query: 121 EEISPQSNYCDDSAKQWPCYPGKSYKGRGPIQLSW 156
           EEISPQSNYCDDS K+WPC PGKSYKGRGPIQLSW
Sbjct: 121 EEISPQSNYCDDSVKEWPCSPGKSYKGRGPIQLSW 154

[Close]
BLAST of Lsi09G007640 vs. TrEMBL
Match: H9LTV4_ELAGV (Class II chitinase (Fragment) OS=Elaeis guineensis var. tenera GN=CHI2 PE=2 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 2.0e-57
Identity = 105/152 (69.08%), Postives = 124/152 (81.58%), Query Frame = 1 

Query: 7   LFLSFIFFFGMG--LPSMTEGHGRRGRKS-RVSSLVSEELFKTLFLHKDDSACPANGFYS 66
           L LS + FF     LP ++    R    +  + S+VS+ELF ++FLHKDDSACPA GFY+
Sbjct: 4   LILSLLLFFSSSNILPFISYAEARHVPYAPHILSIVSKELFNSIFLHKDDSACPAKGFYT 63

Query: 67  YQAFIEATKRFPKFGATGCLATRKREIAAFLAQISHETTGGWATAPDGPFAWGLCFKEEI 126
           Y +F++ATK FP+FG TG LATRKRE+AAFLAQISHETTGGWATAPDGP+AWGLCFKEE+
Sbjct: 64  YSSFVQATKCFPRFGNTGDLATRKREVAAFLAQISHETTGGWATAPDGPYAWGLCFKEEV 123

Query: 127 SPQSNYCDDSAKQWPCYPGKSYKGRGPIQLSW 156
           SPQSNYCD + KQWPCYPG+SYKGRGPIQLSW
Sbjct: 124 SPQSNYCDSTNKQWPCYPGESYKGRGPIQLSW 155

[Close]
BLAST of Lsi09G007640 vs. TrEMBL
Match: A0A077RYC1_WHEAT (Uncharacterized protein OS=Triticum aestivum GN=TRAES_3BF073700160CFD_c1 PE=3 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 2.7e-57
Identity = 100/148 (67.57%), Postives = 120/148 (81.08%), Query Frame = 1 

Query: 8   FLSFIFFFGMGLPSMTEGHGRRGRKSRVSSLVSEELFKTLFLHKDDSACPANGFYSYQAF 67
           FL  +  F      ++  HG  G+   V ++V+EEL+ +LFLHKDD+ CPA GFY+Y +F
Sbjct: 21  FLIAVAVFSAAAAVVSARHGAAGQCGPVGAIVTEELYSSLFLHKDDAVCPAKGFYTYASF 80

Query: 68  IEATKRFPKFGATGCLATRKREIAAFLAQISHETTGGWATAPDGPFAWGLCFKEEISPQS 127
           I AT++FPKFGATG L TRKRE+AAFLAQISHETTGGWATAPDGP++WGLC+KEEISPQS
Sbjct: 81  IRATRKFPKFGATGDLVTRKREVAAFLAQISHETTGGWATAPDGPYSWGLCYKEEISPQS 140

Query: 128 NYCDDSAKQWPCYPGKSYKGRGPIQLSW 156
           NYCD + KQWPCYPGKSY GRGPIQ+SW
Sbjct: 141 NYCDATDKQWPCYPGKSYHGRGPIQISW 168

[Close]
BLAST of Lsi09G007640 vs. TrEMBL
Match: I3SJS9_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 3.5e-57
Identity = 106/156 (67.95%), Postives = 127/156 (81.41%), Query Frame = 1 

Query: 1   MASKIILFLSFIFFFGMGLPSMTEG-HGRRGRKSRVSSLVSEELFKTLFLHKDDSACPAN 60
           ++S +  F SFIF F + L S + G   R    + +SSL+S+ LF ++FLHKDDSACPA 
Sbjct: 5   LSSIVASFSSFIFCFTILLHSSSFGAEARYSPITPISSLISKSLFDSIFLHKDDSACPAK 64

Query: 61  GFYSYQAFIEATKRFPKFGATGCLATRKREIAAFLAQISHETTGGWATAPDGPFAWGLCF 120
            FY+Y++FI+A+K FP FGAT  L TRKREIAAFLAQISHETTGGWATAPDGP+AWGLCF
Sbjct: 65  NFYTYESFIQASKCFPAFGATDSLTTRKREIAAFLAQISHETTGGWATAPDGPYAWGLCF 124

Query: 121 KEEISPQSNYCDDSAKQWPCYPGKSYKGRGPIQLSW 156
           KEE+SPQS+YCD + K+WPCYPGKSYKGRGPIQLSW
Sbjct: 125 KEEVSPQSDYCDSTNKEWPCYPGKSYKGRGPIQLSW 160

[Close]
BLAST of Lsi09G007640 vs. TrEMBL
Match: A0A067HFK7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024628mg PE=3 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 1.0e-56
Identity = 99/128 (77.34%), Postives = 113/128 (88.28%), Query Frame = 1 

Query: 28  RRGRKSRVSSLVSEELFKTLFLHKDDSACPANGFYSYQAFIEATKRFPKFGATGCLATRK 87
           RR R   +S+LVS+ELF  +FLHKDD+ACPA GFY+Y +FI+AT  FP+FG  G LATRK
Sbjct: 17  RRDRDPLISNLVSKELFAAIFLHKDDNACPAKGFYTYDSFIQATSCFPRFGNVGSLATRK 76

Query: 88  REIAAFLAQISHETTGGWATAPDGPFAWGLCFKEEISPQSNYCDDSAKQWPCYPGKSYKG 147
           REIAAFLAQISHETTGGWATAPDGPFAWGLCFKEE++PQS+YCD S ++WPCYPGKSYKG
Sbjct: 77  REIAAFLAQISHETTGGWATAPDGPFAWGLCFKEEVTPQSDYCDSSNRKWPCYPGKSYKG 136

Query: 148 RGPIQLSW 156
           RGPIQLSW
Sbjct: 137 RGPIQLSW 144

[Close]
BLAST of Lsi09G007640 vs. TAIR10
Match: AT4G01700.1 (AT4G01700.1 Chitinase family protein)

HSP 1 Score: 213.4 bits (542), Expect = 1.0e-55
Identity = 98/158 (62.03%), Postives = 117/158 (74.05%), Query Frame = 1 

Query: 1   MASKIILFLSFIFFFGMGLPSMTEGHGRRGRKSR---VSSLVSEELFKTLFLHKDDSACP 60
           M  +I L L  + F      S+ E   R+  K +   + SLV   L+  +F+HKD++ACP
Sbjct: 1   MEKQISLLLCLLLFIFSISSSLHETEARKHNKYKPAPIMSLVPRTLYDQIFIHKDNNACP 60

Query: 61  ANGFYSYQAFIEATKRFPKFGATGCLATRKREIAAFLAQISHETTGGWATAPDGPFAWGL 120
           A GFY Y+AF+EAT+ FPKFG+ G   TR+RE+AAFLAQISHETTGGWATAPDGP+AWGL
Sbjct: 61  AKGFYPYEAFVEATRSFPKFGSVGNFWTRRREVAAFLAQISHETTGGWATAPDGPYAWGL 120

Query: 121 CFKEEISPQSNYCDDSAKQWPCYPGKSYKGRGPIQLSW 156
           CFKEE+SPQSNYCD S K WPC  GKSYKGRGPIQLSW
Sbjct: 121 CFKEEVSPQSNYCDASNKDWPCVSGKSYKGRGPIQLSW 158

[Close]
BLAST of Lsi09G007640 vs. TAIR10
Match: AT1G02360.1 (AT1G02360.1 Chitinase family protein)

HSP 1 Score: 205.3 bits (521), Expect = 2.7e-53
Identity = 82/121 (67.77%), Postives = 105/121 (86.78%), Query Frame = 1 

Query: 35  VSSLVSEELFKTLFLHKDDSACPANGFYSYQAFIEATKRFPKFGATGCLATRKREIAAFL 94
           +  LV  +L+  +F+HKD++ACPANGFY+Y++F++AT+RFP+FG+ G   T++ E+AAFL
Sbjct: 30  IERLVPRDLYNKIFIHKDNTACPANGFYTYESFVQATRRFPRFGSVGSPVTQRLEVAAFL 89

Query: 95  AQISHETTGGWATAPDGPFAWGLCFKEEISPQSNYCDDSAKQWPCYPGKSYKGRGPIQLS 154
           AQISHETTGGWATAPDGP+AWGLCFKEE+SPQS YCD S  QWPC+P K+Y+GRGPIQLS
Sbjct: 90  AQISHETTGGWATAPDGPYAWGLCFKEEVSPQSTYCDSSDTQWPCFPNKTYQGRGPIQLS 149

Query: 155 W 156
           W
Sbjct: 150 W 150

[Close]
BLAST of Lsi09G007640 vs. TAIR10
Match: AT3G12500.1 (AT3G12500.1 basic chitinase)

HSP 1 Score: 175.3 bits (443), Expect = 3.0e-44
Identity = 77/133 (57.89%), Postives = 94/133 (70.68%), Query Frame = 1 

Query: 23  TEGHGRRGRKSRVSSLVSEELFKTLFLHKDDSACPANGFYSYQAFIEATKRFPKFGATGC 82
           T G    G    +S ++S   F  +  H++D+ACPA GFY+Y AFI A K FP FG TG 
Sbjct: 74  TPGGTPPGPTGDLSGIISSSQFDDMLKHRNDAACPARGFYTYNAFITAAKSFPGFGTTGD 133

Query: 83  LATRKREIAAFLAQISHETTGGWATAPDGPFAWGLCFKEEISPQSNYCDDSAKQWPCYPG 142
            ATRK+E+AAF  Q SHETTGGWATAPDGP++WG CFK+E +P S+YC+ SA  WPC  G
Sbjct: 134 TATRKKEVAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPASDYCEPSA-TWPCASG 193

Query: 143 KSYKGRGPIQLSW 156
           K Y GRGP+QLSW
Sbjct: 194 KRYYGRGPMQLSW 205

[Close]
BLAST of Lsi09G007640 vs. TAIR10
Match: AT1G05850.1 (AT1G05850.1 Chitinase family protein)

HSP 1 Score: 102.8 bits (255), Expect = 1.9e-22
Identity = 48/115 (41.74%), Postives = 69/115 (60.00%), Query Frame = 1 

Query: 44  FKTLFLHKDDSACPANGFYSYQAFIEATKRFPK--FGATGCLATRKREIAAFLAQISHET 103
           F+ LF  ++     A GF+ YQ+FI A   F    FG TG     ++E+AAFL  ++ +T
Sbjct: 69  FEQLFSKRNTPIAHAVGFWDYQSFITAAALFEPLGFGTTGGKLMGQKEMAAFLGHVASKT 128

Query: 104 TGGWATAPDGPFAWGLCFKEEISPQSNYCDDSAK-QWPCYPGKSYKGRGPIQLSW 156
           + G+  A  GP AWGLC+  E+SP  +YCD+S K ++PC PG  Y GRG + + W
Sbjct: 129 SCGYGVATGGPLAWGLCYNREMSPMQSYCDESWKFKYPCSPGAEYYGRGALPIYW 183

[Close]
BLAST of Lsi09G007640 vs. TAIR10
Match: AT3G54420.1 (AT3G54420.1 homolog of carrot EP3-3 chitinase)

HSP 1 Score: 99.4 bits (246), Expect = 2.1e-21
Identity = 53/122 (43.44%), Postives = 72/122 (59.02%), Query Frame = 1 

Query: 35  VSSLVSEELFKTLFLHKDDSACPANGFYSYQAFIEATKRFPKFGATGCLATRKREIAAFL 94
           V+ +V++E F  + + +  S+C  N FYS  AF+EA   + +FG  G     +REIAAF 
Sbjct: 72  VAEIVTQEFFNGI-ISQAASSCAGNRFYSRGAFLEALDSYSRFGRVGSTDDSRREIAAFF 131

Query: 95  AQISHETTGGWATAPDGPFAWGLCFKEEISPQS-NYCDDSAKQWPCYPGKSYKGRGPIQL 154
           A ++HET         G F    C+ EEI   S +YCD++A Q+PC P K Y GRGPIQL
Sbjct: 132 AHVTHET---------GHF----CYIEEIDGASKDYCDENATQYPCNPNKGYYGRGPIQL 179

Query: 155 SW 156
           SW
Sbjct: 192 SW 179

[Close]
BLAST of Lsi09G007640 vs. NCBI nr
Match: gi|659072573|ref|XP_008466241.1| (PREDICTED: chitinase 10 [Cucumis melo])

HSP 1 Score: 286.6 bits (732), Expect = 2.6e-74
Identity = 135/155 (87.10%), Postives = 140/155 (90.32%), Query Frame = 1 

Query: 1   MASKIILFLSFIFFFGMGLPSMTEGHGRRGRKSRVSSLVSEELFKTLFLHKDDSACPANG 60
           M SK+ LFLSFI      LPSMTE +GRR +   +SSL+SEELFKTLFLHKDDSACPANG
Sbjct: 1   MTSKL-LFLSFILLLLGSLPSMTESYGRREKICGISSLISEELFKTLFLHKDDSACPANG 60

Query: 61  FYSYQAFIEATKRFPKFGATGCLATRKREIAAFLAQISHETTGGWATAPDGPFAWGLCFK 120
           FYSYQAFIEATKRFPKFG TGCLATRKREIAAFLAQISHETTGGWATAPDGPFAWGLCFK
Sbjct: 61  FYSYQAFIEATKRFPKFGTTGCLATRKREIAAFLAQISHETTGGWATAPDGPFAWGLCFK 120

Query: 121 EEISPQSNYCDDSAKQWPCYPGKSYKGRGPIQLSW 156
           EEISPQSNYCDDS KQWPCYPGKSYKGRGPIQLSW
Sbjct: 121 EEISPQSNYCDDSVKQWPCYPGKSYKGRGPIQLSW 154

[Close]
BLAST of Lsi09G007640 vs. NCBI nr
Match: gi|449463513|ref|XP_004149478.1| (PREDICTED: chitinase 10 [Cucumis sativus])

HSP 1 Score: 280.4 bits (716), Expect = 1.9e-72
Identity = 132/155 (85.16%), Postives = 137/155 (88.39%), Query Frame = 1 

Query: 1   MASKIILFLSFIFFFGMGLPSMTEGHGRRGRKSRVSSLVSEELFKTLFLHKDDSACPANG 60
           M SK  LFLSFI F G  LP MTEGH RR +   +SSL+SEELFKTLFLHKDD ACPANG
Sbjct: 1   MTSKF-LFLSFILFLGTSLPLMTEGHRRREKIYGISSLISEELFKTLFLHKDDGACPANG 60

Query: 61  FYSYQAFIEATKRFPKFGATGCLATRKREIAAFLAQISHETTGGWATAPDGPFAWGLCFK 120
           FYSYQAFIEAT RFPKFG TGCLATRKREIAAFLAQISHETTGGWATAP+GPFAWGLCFK
Sbjct: 61  FYSYQAFIEATWRFPKFGTTGCLATRKREIAAFLAQISHETTGGWATAPNGPFAWGLCFK 120

Query: 121 EEISPQSNYCDDSAKQWPCYPGKSYKGRGPIQLSW 156
           EEISPQSNYCDDS K+WPC PGKSYKGRGPIQLSW
Sbjct: 121 EEISPQSNYCDDSVKEWPCSPGKSYKGRGPIQLSW 154

[Close]
BLAST of Lsi09G007640 vs. NCBI nr
Match: gi|700194609|gb|KGN49786.1| (hypothetical protein Csa_5G128240 [Cucumis sativus])

HSP 1 Score: 280.4 bits (716), Expect = 1.9e-72
Identity = 132/155 (85.16%), Postives = 137/155 (88.39%), Query Frame = 1 

Query: 1   MASKIILFLSFIFFFGMGLPSMTEGHGRRGRKSRVSSLVSEELFKTLFLHKDDSACPANG 60
           M SK  LFLSFI F G  LP MTEGH RR +   +SSL+SEELFKTLFLHKDD ACPANG
Sbjct: 1   MTSKF-LFLSFILFLGTSLPLMTEGHRRREKIYGISSLISEELFKTLFLHKDDGACPANG 60

Query: 61  FYSYQAFIEATKRFPKFGATGCLATRKREIAAFLAQISHETTGGWATAPDGPFAWGLCFK 120
           FYSYQAFIEAT RFPKFG TGCLATRKREIAAFLAQISHETTGGWATAP+GPFAWGLCFK
Sbjct: 61  FYSYQAFIEATWRFPKFGTTGCLATRKREIAAFLAQISHETTGGWATAPNGPFAWGLCFK 120

Query: 121 EEISPQSNYCDDSAKQWPCYPGKSYKGRGPIQLSW 156
           EEISPQSNYCDDS K+WPC PGKSYKGRGPIQLSW
Sbjct: 121 EEISPQSNYCDDSVKEWPCSPGKSYKGRGPIQLSW 154

[Close]
BLAST of Lsi09G007640 vs. NCBI nr
Match: gi|568878915|ref|XP_006492429.1| (PREDICTED: chitinase 10 [Citrus sinensis])

HSP 1 Score: 231.5 bits (589), Expect = 1.0e-57
Identity = 107/152 (70.39%), Postives = 123/152 (80.92%), Query Frame = 1 

Query: 7   LFLSFIFFFGMGLPSMTEGH---GRRGRKSRVSSLVSEELFKTLFLHKDDSACPANGFYS 66
           LFLSF+    M L      H    RR R+  +S+LVS+ELF  +FLHKDD+ACPA GFY+
Sbjct: 11  LFLSFLISMTMLLVLCFATHTAEARRDREPLISNLVSKELFAAIFLHKDDNACPAKGFYT 70

Query: 67  YQAFIEATKRFPKFGATGCLATRKREIAAFLAQISHETTGGWATAPDGPFAWGLCFKEEI 126
           Y +FI+AT  FP+FG  G LATRKREIAAFLAQISHETTGGWATAPDGPFAWGLCFKEE+
Sbjct: 71  YDSFIQATSCFPRFGNVGSLATRKREIAAFLAQISHETTGGWATAPDGPFAWGLCFKEEV 130

Query: 127 SPQSNYCDDSAKQWPCYPGKSYKGRGPIQLSW 156
           +PQS+YCD S ++WPCYPGKSYKGRGPIQLSW
Sbjct: 131 TPQSDYCDSSNRKWPCYPGKSYKGRGPIQLSW 162

[Close]
BLAST of Lsi09G007640 vs. NCBI nr
Match: gi|672161081|ref|XP_008800340.1| (PREDICTED: chitinase 10 [Phoenix dactylifera])

HSP 1 Score: 231.1 bits (588), Expect = 1.3e-57
Identity = 105/152 (69.08%), Postives = 123/152 (80.92%), Query Frame = 1 

Query: 7   LFLSFIFFFGMGLPSM---TEGHGRRGRKSRVSSLVSEELFKTLFLHKDDSACPANGFYS 66
           L LSF+ FF   + S     E        S +SS++SEELF ++FLHKDDSACPA GFY+
Sbjct: 14  LILSFLLFFSSSILSFLSHAEARYDPSYGSPISSIISEELFNSIFLHKDDSACPAKGFYT 73

Query: 67  YQAFIEATKRFPKFGATGCLATRKREIAAFLAQISHETTGGWATAPDGPFAWGLCFKEEI 126
           Y +F++ATK FP+FG TG  ATRKRE+AAFLAQISHETTGGWATAPDGP+AWGLCFKEE+
Sbjct: 74  YFSFVQATKCFPRFGNTGDGATRKREVAAFLAQISHETTGGWATAPDGPYAWGLCFKEEV 133

Query: 127 SPQSNYCDDSAKQWPCYPGKSYKGRGPIQLSW 156
           SPQSNYCD + ++WPCYPGKSYKGRGPIQLSW
Sbjct: 134 SPQSNYCDSTNQEWPCYPGKSYKGRGPIQLSW 165

The following BLAST results are available for this feature:
BLAST of Lsi09G007640 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CHI10_ORYSJ6.5e-5772.52Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1[more]
CHI2_BRANA3.7e-4461.90Endochitinase CH25 OS=Brassica napus PE=2 SV=1[more]
CHIA_SECCE8.3e-4468.33Basic endochitinase A OS=Secale cereale GN=rsca PE=1 SV=1[more]
CHI2_ORYSJ4.1e-4362.81Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1[more]
CHIB_ARATH5.4e-4357.89Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3[more]
BLAST of Lsi09G007640 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KPY3_CUCSA1.3e-7285.16Uncharacterized protein OS=Cucumis sativus GN=Csa_5G128240 PE=4 SV=1[more]
H9LTV4_ELAGV2.0e-5769.08Class II chitinase (Fragment) OS=Elaeis guineensis var. tenera GN=CHI2 PE=2 SV=1[more]
A0A077RYC1_WHEAT2.7e-5767.57Uncharacterized protein OS=Triticum aestivum GN=TRAES_3BF073700160CFD_c1 PE=3 SV... [more]
I3SJS9_LOTJA3.5e-5767.95Uncharacterized protein OS=Lotus japonicus PE=2 SV=1[more]
A0A067HFK7_CITSI1.0e-5677.34Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024628mg PE=3 SV=1[more]
BLAST of Lsi09G007640 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G01700.11.0e-5562.03 Chitinase family protein[more]
AT1G02360.12.7e-5367.77 Chitinase family protein[more]
AT3G12500.13.0e-4457.89 basic chitinase[more]
AT1G05850.11.9e-2241.74 Chitinase family protein[more]
AT3G54420.12.1e-2143.44 homolog of carrot EP3-3 chitinase[more]
BLAST of Lsi09G007640 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659072573|ref|XP_008466241.1|2.6e-7487.10PREDICTED: chitinase 10 [Cucumis melo][more]
gi|449463513|ref|XP_004149478.1|1.9e-7285.16PREDICTED: chitinase 10 [Cucumis sativus][more]
gi|700194609|gb|KGN49786.1|1.9e-7285.16hypothetical protein Csa_5G128240 [Cucumis sativus][more]
gi|568878915|ref|XP_006492429.1|1.0e-5770.39PREDICTED: chitinase 10 [Citrus sinensis][more]
gi|672161081|ref|XP_008800340.1|1.3e-5769.08PREDICTED: chitinase 10 [Phoenix dactylifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0016998cell wall macromolecule catabolic process
GO:0006032chitin catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004568chitinase activity
Vocabulary: INTERPRO
TermDefinition
IPR023346Lysozyme-like_dom_sf
IPR000726Glyco_hydro_19_cat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0016998 cell wall macromolecule catabolic process
biological_process GO:0006032 chitin catabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0004568 chitinase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi09G007640.1Lsi09G007640.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000726Glycoside hydrolase, family 19, catalyticPFAMPF00182Glyco_hydro_19coord: 38..155
score: 6.6
IPR000726Glycoside hydrolase, family 19, catalyticPROSITEPS00773CHITINASE_19_1coord: 56..78
scor
IPR023346Lysozyme-like domainunknownSSF53955Lysozyme-likecoord: 35..155
score: 7.87
NoneNo IPR availableGENE3DG3DSA:1.10.530.10coord: 35..104
score: 8.7
NoneNo IPR availableGENE3DG3DSA:3.30.20.10coord: 123..155
score: 1.3
NoneNo IPR availablePANTHERPTHR22595CHITINASE-RELATEDcoord: 28..155
score: 3.8
NoneNo IPR availablePANTHERPTHR22595:SF35SUBFAMILY NOT NAMEDcoord: 28..155
score: 3.8