Lsi09G004140 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi09G004140
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Location	chr09 : 4422721 .. 4423143 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCAAAGCTACAGCCTCTCTTGCTTTCCTTCTTTCTCTCAATCTCCTTTTCTTTTCCCTTGTCTCAGCTTGTAACAATTGCTATGTCCCTAACCCACCCAAGCCAAAACCATGCCCTCCTACAAAGCCAACCCCAAAACCCAGCCCTTCATCTGGCTATGGAAAATGCCCTAGGGACACCCTTAAGCTCGGCGTCTGCGCCAAGCTGCTCGGTGGGCTCGTCGACATTACCATCGGCAAGCCCCCGGTGACCCCATGCTGCAGTCTCATTGAAGGTCTTGCTGATCTTGAAGCTGCTGTCTGCCTTTGCACTGCCATTAAAGCTAGCATTTTGGGCACCAACCTTAATATCCCTCTCTCCCTTAGCTTGCTCCTTAATGTTTGCCAAAAGAATGTTCCGAAGGGATTTCAGTGCTGA

mRNA sequence

ATGGCTTCCAAAGCTACAGCCTCTCTTGCTTTCCTTCTTTCTCTCAATCTCCTTTTCTTTTCCCTTGTCTCAGCTTGTAACAATTGCTATGTCCCTAACCCACCCAAGCCAAAACCATGCCCTCCTACAAAGCCAACCCCAAAACCCAGCCCTTCATCTGGCTATGGAAAATGCCCTAGGGACACCCTTAAGCTCGGCGTCTGCGCCAAGCTGCTCGGTGGGCTCGTCGACATTACCATCGGCAAGCCCCCGGTGACCCCATGCTGCAGTCTCATTGAAGGTCTTGCTGATCTTGAAGCTGCTGTCTGCCTTTGCACTGCCATTAAAGCTAGCATTTTGGGCACCAACCTTAATATCCCTCTCTCCCTTAGCTTGCTCCTTAATGTTTGCCAAAAGAATGTTCCGAAGGGATTTCAGTGCTGA

Coding sequence (CDS)

ATGGCTTCCAAAGCTACAGCCTCTCTTGCTTTCCTTCTTTCTCTCAATCTCCTTTTCTTTTCCCTTGTCTCAGCTTGTAACAATTGCTATGTCCCTAACCCACCCAAGCCAAAACCATGCCCTCCTACAAAGCCAACCCCAAAACCCAGCCCTTCATCTGGCTATGGAAAATGCCCTAGGGACACCCTTAAGCTCGGCGTCTGCGCCAAGCTGCTCGGTGGGCTCGTCGACATTACCATCGGCAAGCCCCCGGTGACCCCATGCTGCAGTCTCATTGAAGGTCTTGCTGATCTTGAAGCTGCTGTCTGCCTTTGCACTGCCATTAAAGCTAGCATTTTGGGCACCAACCTTAATATCCCTCTCTCCCTTAGCTTGCTCCTTAATGTTTGCCAAAAGAATGTTCCGAAGGGATTTCAGTGCTGA

Protein sequence

MASKATASLAFLLSLNLLFFSLVSACNNCYVPNPPKPKPCPPTKPTPKPSPSSGYGKCPRDTLKLGVCAKLLGGLVDITIGKPPVTPCCSLIEGLADLEAAVCLCTAIKASILGTNLNIPLSLSLLLNVCQKNVPKGFQC

Homology

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BLAST of Lsi09G004140 vs. Swiss-Prot
Match: 14KD_DAUCA (14 kDa proline-rich protein DC2.15 OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 6.5e-40
Identity = 87/140 (62.14%), Postives = 107/140 (76.43%), Query Frame = 1


Query: 1   MASKATASLAFLLSLNLLFFSLVSACNNCYVPNPPKPKPCPPTKPTPKPSPSSGYGKCPR 60
           M SK +AS+A   +LN+LFF+LVS+   C  P+P KPKP P  KPTP P PS+  GKCPR
Sbjct: 1   MGSKNSASVALFFTLNILFFALVSSTEKC--PDPYKPKPKPTPKPTPTPYPSA--GKCPR 60

Query: 61  DTLKLGVCAKLLGGLVDITIGKPPVTPCCSLIEGLADLEAAVCLCTAIKASILGTNLNIP 120
           D LKLGVCA +L  + ++ IG PP  PCCSL+EGL +LEAAVCLCTAIKA+ILG NLN+P
Sbjct: 61  DALKLGVCADVLNLVHNVVIGSPPTLPCCSLLEGLVNLEAAVCLCTAIKANILGKNLNLP 120

Query: 121 LSLSLLLNVCQKNVPKGFQC 141
           ++LSL+LN C K VP GF+C
Sbjct: 121 IALSLVLNNCGKQVPNGFEC 136

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BLAST of Lsi09G004140 vs. Swiss-Prot
Match: ERLI1_ARATH (Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana GN=EARLI1 PE=1 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 2.2e-35
Identity = 81/167 (48.50%), Postives = 107/167 (64.07%), Query Frame = 1


Query: 1   MASKATASLAFLLSLNLLFFSLVSACNNCYVPNP-------PKPKPCPPTKPTPKPSPS- 60
           MASK +AS+A   +LN++FF+L +A +    P+P       PKPKP P  KP P PSPS 
Sbjct: 1   MASKNSASIALFFALNIIFFTLTAATDCGCNPSPKHKPVPSPKPKPVPSPKPKPVPSPSV 60

Query: 61  -------------------SGYGKCPRDTLKLGVCAKLLGGLVDITIGKPPVTPCCSLIE 120
                                 G CP D L+LGVCA +L  L++I +G+P   PCCSLI+
Sbjct: 61  PSPSVPSPNPRPVTPPRTPGSSGNCPIDALRLGVCANVLSSLLNIQLGQPSAQPCCSLIQ 120

Query: 121 GLADLEAAVCLCTAIKASILGTNLNIPLSLSLLLNVCQKNVPKGFQC 141
           GL DL+AA+CLCTA++A++LG NLN+P+SLS+LLNVC + VP GFQC
Sbjct: 121 GLVDLDAAICLCTALRANVLGINLNVPISLSVLLNVCNRKVPSGFQC 167

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BLAST of Lsi09G004140 vs. Swiss-Prot
Match: ERLL1_ARATH (pEARLI1-like lipid transfer protein 1 OS=Arabidopsis thaliana GN=AZI1 PE=1 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 5.4e-34
Identity = 82/160 (51.25%), Postives = 107/160 (66.88%), Query Frame = 1


Query: 1   MASKATASLAFLLSLNLLFFSLVSACN-NCY-------VPNP-PKPKPCPPT------KP 60
           MASK +ASLA   +LN+LFF+L  A N NC        VP+P PKP  CPP        P
Sbjct: 1   MASKNSASLALFFALNILFFTLTVATNCNCKPSPKPKPVPSPKPKPVQCPPPPRPSVPSP 60

Query: 61  TPKP-----SPSSGYGKCPRDTLKLGVCAKLLGGLVDITIGKPPVTPCCSLIEGLADLEA 120
            P+P     +P S    CP D LKLGVCA +L  L++I +G+P    CCSLI+GL D++A
Sbjct: 61  NPRPVTPPRTPGSSGNSCPIDALKLGVCANVLSSLLNIQLGQPSSQQCCSLIQGLVDVDA 120

Query: 121 AVCLCTAIKASILGTNLNIPLSLSLLLNVCQKNVPKGFQC 141
           A+CLCTA++A++LG NLN+P+SLS+LLNVC + +P GFQC
Sbjct: 121 AICLCTALRANVLGINLNVPISLSVLLNVCNRKLPSGFQC 160

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BLAST of Lsi09G004140 vs. Swiss-Prot
Match: ERLL2_ARATH (pEARLI1-like lipid transfer protein 2 OS=Arabidopsis thaliana GN=At4g12490 PE=2 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 8.6e-32
Identity = 80/181 (44.20%), Postives = 103/181 (56.91%), Query Frame = 1


Query: 1   MASKATASLAFLLSLNLLFFSLVSACN-NC---------------------------YVP 60
           MASK +ASLA   +LN+LFF+L +  N  C                           YVP
Sbjct: 1   MASKNSASLALFFALNILFFTLTAGTNCRCNPSPKPRPLPNPKVPSPKVPTPSVPSPYVP 60

Query: 61  NPPKPKPCPPTKPTPKPSPSS-------------GYGKCPRDTLKLGVCAKLLGGLVDIT 120
            P  P P  PT   P PS  S               G CP D L+LGVCA +L GL+++ 
Sbjct: 61  TPSVPSPSVPTPSVPSPSVPSPNPTPVIPPRTPGSSGNCPIDALRLGVCANVLSGLLNVQ 120

Query: 121 IGKPPVTPCCSLIEGLADLEAAVCLCTAIKASILGTNLNIPLSLSLLLNVCQKNVPKGFQ 141
           +G+P   PCCSLI+GL DL+AAVCLCTA++A++LG NLN+P+SLS+LLNVC + +P  FQ
Sbjct: 121 LGQPSPQPCCSLIQGLVDLDAAVCLCTALRANVLGINLNVPISLSVLLNVCNRRLPSNFQ 180

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BLAST of Lsi09G004140 vs. Swiss-Prot
Match: ERLL3_ARATH (pEARLI1-like lipid transfer protein 3 OS=Arabidopsis thaliana GN=At4g12500 PE=2 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.5e-31
Identity = 77/176 (43.75%), Postives = 104/176 (59.09%), Query Frame = 1


Query: 1   MASKATASLAFLLSLNLLFFSLVSA----CN------------------------NCYVP 60
           MASK + SLA   +LN+LFF+L +A    CN                        +  VP
Sbjct: 1   MASKNSTSLALFFALNILFFTLTTATDCRCNLSPKPRTVPSPKVPSPKYPSPSIPSPSVP 60

Query: 61  NPPKPKPCPPTKPTPKPSPS--------SGYGKCPRDTLKLGVCAKLLGGLVDITIGKPP 120
            P  P P  PT   P P+P+           G CP D L+LGVCA +L GL+++ +G+P 
Sbjct: 61  TPSVPTPSVPTPSVPSPNPTPVTPPRTPGSSGNCPIDALRLGVCANVLSGLLNVQLGQPS 120

Query: 121 VTPCCSLIEGLADLEAAVCLCTAIKASILGTNLNIPLSLSLLLNVCQKNVPKGFQC 141
             PCCSLI+GL DL+AA+CLCTA++A++LG NLN+P+SLS+LLNVC + +P  FQC
Sbjct: 121 AQPCCSLIQGLVDLDAAICLCTALRANVLGINLNVPISLSVLLNVCNRRLPSDFQC 176

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BLAST of Lsi09G004140 vs. TrEMBL
Match: A0A0A0KR89_CUCSA (HyPRP2 OS=Cucumis sativus GN=Csa_5G161900 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 4.7e-69
Identity = 132/140 (94.29%), Postives = 137/140 (97.86%), Query Frame = 1


Query: 1   MASKATASLAFLLSLNLLFFSLVSACNNCYVPNPPKPKPCPPTKPTPKPSPSSGYGKCPR 60
           MASKAT SLAFLLSLNLLFF+LVSACNNCY+P+PPKPKPCPPTKPTPKPSPSSGYGKCPR
Sbjct: 1   MASKATTSLAFLLSLNLLFFTLVSACNNCYIPDPPKPKPCPPTKPTPKPSPSSGYGKCPR 60

Query: 61  DTLKLGVCAKLLGGLVDITIGKPPVTPCCSLIEGLADLEAAVCLCTAIKASILGTNLNIP 120
           DTLKLGVCAKLLGGL+DITIGKPPVTPCCSLIEGLADLEAAVCLCTAIKA ILG NLN+P
Sbjct: 61  DTLKLGVCAKLLGGLLDITIGKPPVTPCCSLIEGLADLEAAVCLCTAIKADILGINLNVP 120

Query: 121 LSLSLLLNVCQKNVPKGFQC 141
           LSLSLLLNVCQKNVPKGFQC
Sbjct: 121 LSLSLLLNVCQKNVPKGFQC 140

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BLAST of Lsi09G004140 vs. TrEMBL
Match: A0A0A0KKL9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G161890 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 1.4e-57
Identity = 113/140 (80.71%), Postives = 126/140 (90.00%), Query Frame = 1


Query: 1   MASKATASLAFLLSLNLLFFSLVSACNNCYVPNPPKPKPCPPTKPTPKPSPSSGYGKCPR 60
           MASKA+ASLAFLLSLNLLFF+ VSAC+NCYVP PPKPKPCPPTKP    +P S YGKCP+
Sbjct: 1   MASKASASLAFLLSLNLLFFTFVSACDNCYVPAPPKPKPCPPTKP----NPPSNYGKCPK 60

Query: 61  DTLKLGVCAKLLGGLVDITIGKPPVTPCCSLIEGLADLEAAVCLCTAIKASILGTNLNIP 120
           DTLK+GVCAKLLGGLVD+TIGKPPVTPCC+L++GLADLEAAVCLCTAIKAS+LG  + IP
Sbjct: 61  DTLKIGVCAKLLGGLVDLTIGKPPVTPCCTLVKGLADLEAAVCLCTAIKASVLGNKIKIP 120

Query: 121 LSLSLLLNVCQKNVPKGFQC 141
           L LSLLLNVC KN+P GFQC
Sbjct: 121 LHLSLLLNVCNKNLPNGFQC 136

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BLAST of Lsi09G004140 vs. TrEMBL
Match: A0A0A0KP86_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G161860 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 1.8e-57
Identity = 113/140 (80.71%), Postives = 125/140 (89.29%), Query Frame = 1


Query: 1   MASKATASLAFLLSLNLLFFSLVSACNNCYVPNPPKPKPCPPTKPTPKPSPSSGYGKCPR 60
           MASKATASLAFLLSLNLLFF+ VSAC+NCYVP PPKPKPCPPTKP    +P S YGKCP+
Sbjct: 1   MASKATASLAFLLSLNLLFFTFVSACDNCYVPAPPKPKPCPPTKP----NPPSNYGKCPK 60

Query: 61  DTLKLGVCAKLLGGLVDITIGKPPVTPCCSLIEGLADLEAAVCLCTAIKASILGTNLNIP 120
           D LK+GVCAKLLGGLVD+TIGKPPVTPCC+L++GLADLEAAVCLCTAIKAS+LG  + IP
Sbjct: 61  DALKIGVCAKLLGGLVDLTIGKPPVTPCCTLVQGLADLEAAVCLCTAIKASVLGKTIKIP 120

Query: 121 LSLSLLLNVCQKNVPKGFQC 141
           L LSLLLNVC KN+P GFQC
Sbjct: 121 LHLSLLLNVCNKNLPNGFQC 136

[Close]

BLAST of Lsi09G004140 vs. TrEMBL
Match: A0A0A0KMW2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G161880 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 2.4e-57
Identity = 113/140 (80.71%), Postives = 125/140 (89.29%), Query Frame = 1


Query: 1   MASKATASLAFLLSLNLLFFSLVSACNNCYVPNPPKPKPCPPTKPTPKPSPSSGYGKCPR 60
           MASKA ASLAFLLSLNLLFF+LVSAC+ CYVP PPKPKPCPPTKP    +P S YGKCP+
Sbjct: 1   MASKAAASLAFLLSLNLLFFTLVSACDTCYVPAPPKPKPCPPTKP----NPPSNYGKCPK 60

Query: 61  DTLKLGVCAKLLGGLVDITIGKPPVTPCCSLIEGLADLEAAVCLCTAIKASILGTNLNIP 120
           DTLK+GVCAKLLGGLVD+TIGKPPVTPCC+L++GLADLEAAVCLCTAIKAS+LG  + IP
Sbjct: 61  DTLKIGVCAKLLGGLVDLTIGKPPVTPCCTLVQGLADLEAAVCLCTAIKASVLGNKIKIP 120

Query: 121 LSLSLLLNVCQKNVPKGFQC 141
           L LSLLLNVC KN+P GFQC
Sbjct: 121 LHLSLLLNVCNKNLPNGFQC 136

[Close]

BLAST of Lsi09G004140 vs. TrEMBL
Match: A0A0A0KKU4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G161870 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 1.4e-52
Identity = 107/140 (76.43%), Postives = 120/140 (85.71%), Query Frame = 1


Query: 1   MASKATASLAFLLSLNLLFFSLVSACNNCYVPNPPKPKPCPPTKPTPKPSPSSGYGKCPR 60
           MASKATASLAFLLSLNLLFF+LVS+C+NCYVP PPKP+P PP          S YGKCP+
Sbjct: 1   MASKATASLAFLLSLNLLFFTLVSSCDNCYVPAPPKPEPYPP----------SDYGKCPK 60

Query: 61  DTLKLGVCAKLLGGLVDITIGKPPVTPCCSLIEGLADLEAAVCLCTAIKASILGTNLNIP 120
           D LK+GVCAKLLGGLVD+TIGKPPVTPCC+L+EGLADLEAAVCLCTAIKAS+LG  + IP
Sbjct: 61  DALKIGVCAKLLGGLVDLTIGKPPVTPCCTLVEGLADLEAAVCLCTAIKASVLGKMIKIP 120

Query: 121 LSLSLLLNVCQKNVPKGFQC 141
           L LSLL+NVC KN+P GFQC
Sbjct: 121 LHLSLLINVCNKNLPNGFQC 130

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BLAST of Lsi09G004140 vs. TAIR10
Match: AT1G62510.1 (AT1G62510.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 196.1 bits (497), Expect = 1.5e-50
Identity = 100/149 (67.11%), Postives = 114/149 (76.51%), Query Frame = 1


Query: 1   MASKATASLAFLLSLNLLFFSLVSACNNCYVPNP---------PKPKPCPPTKPTPKPSP 60
           MAS+ T SLA  L LN LFF+ +SAC NC  P+P         PKPKP P  KPTP PSP
Sbjct: 1   MASRTTKSLALFLILNFLFFTTISACGNCGCPSPKPKHKPSPSPKPKPNPKPKPTPHPSP 60

Query: 61  SSGYGKCPRDTLKLGVCAKLLGGLVDITIGKPPVTPCCSLIEGLADLEAAVCLCTAIKAS 120
           S    KCPRD LKLGVCA +L GL+++T+GKPPV PCC+LI+GLADLEAA CLCTA+KA+
Sbjct: 61  SPAIAKCPRDALKLGVCANVLNGLLNVTLGKPPVEPCCTLIQGLADLEAAACLCTALKAN 120

Query: 121 ILGTNLNIPLSLSLLLNVCQKNVPKGFQC 141
           ILG NLNIPLSLSLLLNVC K VP+GFQC
Sbjct: 121 ILGINLNIPLSLSLLLNVCSKKVPRGFQC 149

[Close]

BLAST of Lsi09G004140 vs. TAIR10
Match: AT1G12090.1 (AT1G12090.1 extensin-like protein)

HSP 1 Score: 181.8 bits (460), Expect = 2.9e-46
Identity = 90/136 (66.18%), Postives = 109/136 (80.15%), Query Frame = 1


Query: 5   ATASLAFLLSLNLLFFSLVSACNNCYVPNPPKPKPCPPTKPTPKPSPSSGYGKCPRDTLK 64
           A++S+A  L+LNLLFF+ +SAC +C       P P P   P P PSPSSG  KCP+DTLK
Sbjct: 2   ASSSIALFLALNLLFFTTISACGSCTPCGGGCPSPKPKPTPKPTPSPSSGSSKCPKDTLK 61

Query: 65  LGVCAKLLGGLVDITIGKPPVTPCCSLIEGLADLEAAVCLCTAIKASILGTNLNIPLSLS 124
           LGVCA +L GL+D+T+GKPPV PCCSLI+GLAD+EAAVCLCTA+KA+ILG NLN+P+SLS
Sbjct: 62  LGVCANVLNGLLDLTLGKPPVEPCCSLIQGLADVEAAVCLCTALKANILGINLNLPISLS 121

Query: 125 LLLNVCQKNVPKGFQC 141
           LLLNVC K +P GFQC
Sbjct: 122 LLLNVCSKQLPPGFQC 137

[Close]

BLAST of Lsi09G004140 vs. TAIR10
Match: AT4G12510.1 (AT4G12510.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 150.6 bits (379), Expect = 7.2e-37
Identity = 82/140 (58.57%), Postives = 96/140 (68.57%), Query Frame = 1


Query: 1   MASKATASLAFLLSLNLLFFSLVSACNNCYVPNPPKPKPCPPTKPTPKPSPSSGYGKCPR 60
           MASK +ASL   L+ N+LFF+L +AC             C  T P PKP P S  G CP+
Sbjct: 1   MASKISASLVIFLTFNILFFTLTTACGG----------GCSST-PKPKPKPKS-TGSCPK 60

Query: 61  DTLKLGVCAKLLGGLVDITIGKPPVTPCCSLIEGLADLEAAVCLCTAIKASILGTNLNIP 120
           DTLKLGVCA +L  L+ I +G PPV PCCSL+ GL DLEAA CLCTA+KA +LG NLN+P
Sbjct: 61  DTLKLGVCANVLKDLLKIQLGTPPVKPCCSLLNGLVDLEAAACLCTALKAKVLGINLNVP 120

Query: 121 LSLSLLLNVCQKNVPKGFQC 141
           +SLSLLLNVC K VP GF C
Sbjct: 121 VSLSLLLNVCGKKVPSGFVC 128

[Close]

BLAST of Lsi09G004140 vs. TAIR10
Match: AT4G12520.1 (AT4G12520.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 150.6 bits (379), Expect = 7.2e-37
Identity = 82/140 (58.57%), Postives = 96/140 (68.57%), Query Frame = 1


Query: 1   MASKATASLAFLLSLNLLFFSLVSACNNCYVPNPPKPKPCPPTKPTPKPSPSSGYGKCPR 60
           MASK +ASL   L+ N+LFF+L +AC             C  T P PKP P S  G CP+
Sbjct: 1   MASKISASLVIFLTFNILFFTLTTACGG----------GCSST-PKPKPKPKS-TGSCPK 60

Query: 61  DTLKLGVCAKLLGGLVDITIGKPPVTPCCSLIEGLADLEAAVCLCTAIKASILGTNLNIP 120
           DTLKLGVCA +L  L+ I +G PPV PCCSL+ GL DLEAA CLCTA+KA +LG NLN+P
Sbjct: 61  DTLKLGVCANVLKDLLKIQLGTPPVKPCCSLLNGLVDLEAAACLCTALKAKVLGINLNVP 120

Query: 121 LSLSLLLNVCQKNVPKGFQC 141
           +SLSLLLNVC K VP GF C
Sbjct: 121 VSLSLLLNVCGKKVPSGFVC 128

[Close]

BLAST of Lsi09G004140 vs. TAIR10
Match: AT4G12480.1 (AT4G12480.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 149.8 bits (377), Expect = 1.2e-36
Identity = 81/167 (48.50%), Postives = 107/167 (64.07%), Query Frame = 1


Query: 1   MASKATASLAFLLSLNLLFFSLVSACNNCYVPNP-------PKPKPCPPTKPTPKPSPS- 60
           MASK +AS+A   +LN++FF+L +A +    P+P       PKPKP P  KP P PSPS 
Sbjct: 1   MASKNSASIALFFALNIIFFTLTAATDCGCNPSPKHKPVPSPKPKPVPSPKPKPVPSPSV 60

Query: 61  -------------------SGYGKCPRDTLKLGVCAKLLGGLVDITIGKPPVTPCCSLIE 120
                                 G CP D L+LGVCA +L  L++I +G+P   PCCSLI+
Sbjct: 61  PSPSVPSPNPRPVTPPRTPGSSGNCPIDALRLGVCANVLSSLLNIQLGQPSAQPCCSLIQ 120

Query: 121 GLADLEAAVCLCTAIKASILGTNLNIPLSLSLLLNVCQKNVPKGFQC 141
           GL DL+AA+CLCTA++A++LG NLN+P+SLS+LLNVC + VP GFQC
Sbjct: 121 GLVDLDAAICLCTALRANVLGINLNVPISLSVLLNVCNRKVPSGFQC 167

[Close]

BLAST of Lsi09G004140 vs. NCBI nr
Match: gi|778700010|ref|XP_004152410.2| (PREDICTED: 14 kDa proline-rich protein DC2.15-like [Cucumis sativus])

HSP 1 Score: 268.5 bits (685), Expect = 6.7e-69
Identity = 132/140 (94.29%), Postives = 137/140 (97.86%), Query Frame = 1


Query: 1   MASKATASLAFLLSLNLLFFSLVSACNNCYVPNPPKPKPCPPTKPTPKPSPSSGYGKCPR 60
           MASKAT SLAFLLSLNLLFF+LVSACNNCY+P+PPKPKPCPPTKPTPKPSPSSGYGKCPR
Sbjct: 1   MASKATTSLAFLLSLNLLFFTLVSACNNCYIPDPPKPKPCPPTKPTPKPSPSSGYGKCPR 60

Query: 61  DTLKLGVCAKLLGGLVDITIGKPPVTPCCSLIEGLADLEAAVCLCTAIKASILGTNLNIP 120
           DTLKLGVCAKLLGGL+DITIGKPPVTPCCSLIEGLADLEAAVCLCTAIKA ILG NLN+P
Sbjct: 61  DTLKLGVCAKLLGGLLDITIGKPPVTPCCSLIEGLADLEAAVCLCTAIKADILGINLNVP 120

Query: 121 LSLSLLLNVCQKNVPKGFQC 141
           LSLSLLLNVCQKNVPKGFQC
Sbjct: 121 LSLSLLLNVCQKNVPKGFQC 140

[Close]

BLAST of Lsi09G004140 vs. NCBI nr
Match: gi|659073515|ref|XP_008437101.1| (PREDICTED: 14 kDa proline-rich protein DC2.15-like [Cucumis melo])

HSP 1 Score: 268.1 bits (684), Expect = 8.8e-69
Identity = 132/140 (94.29%), Postives = 137/140 (97.86%), Query Frame = 1


Query: 1   MASKATASLAFLLSLNLLFFSLVSACNNCYVPNPPKPKPCPPTKPTPKPSPSSGYGKCPR 60
           MASKAT SLAFLLSLNLLFF+LVSACNNCYVP PPKPKPCPPTKPTPKPSPSSGYGKCPR
Sbjct: 1   MASKATTSLAFLLSLNLLFFTLVSACNNCYVPEPPKPKPCPPTKPTPKPSPSSGYGKCPR 60

Query: 61  DTLKLGVCAKLLGGLVDITIGKPPVTPCCSLIEGLADLEAAVCLCTAIKASILGTNLNIP 120
           DTLKLGVCAKLLGGLVD+TIGKPPVTPCCSLIEGLADLEAAVCLCTAIKA++LG NLNIP
Sbjct: 61  DTLKLGVCAKLLGGLVDVTIGKPPVTPCCSLIEGLADLEAAVCLCTAIKANLLGLNLNIP 120

Query: 121 LSLSLLLNVCQKNVPKGFQC 141
           +SLSLLLNVCQKNVPKGFQC
Sbjct: 121 VSLSLLLNVCQKNVPKGFQC 140

[Close]

BLAST of Lsi09G004140 vs. NCBI nr
Match: gi|659073517|ref|XP_008437102.1| (PREDICTED: 14 kDa proline-rich protein DC2.15-like [Cucumis melo])

HSP 1 Score: 233.4 bits (594), Expect = 2.4e-58
Identity = 115/140 (82.14%), Postives = 126/140 (90.00%), Query Frame = 1


Query: 1   MASKATASLAFLLSLNLLFFSLVSACNNCYVPNPPKPKPCPPTKPTPKPSPSSGYGKCPR 60
           MASKATASLAFLLSLNLLFF+ VSAC+NCYVP PPKPKPCPPTKP    +P S YGKCP+
Sbjct: 1   MASKATASLAFLLSLNLLFFTFVSACDNCYVPAPPKPKPCPPTKP----NPPSNYGKCPK 60

Query: 61  DTLKLGVCAKLLGGLVDITIGKPPVTPCCSLIEGLADLEAAVCLCTAIKASILGTNLNIP 120
           DTLK+GVCAKLLGGLVD+TIGKPPVTPCC+L+EGLADLEAAVCLCTAIKAS+LG  + IP
Sbjct: 61  DTLKIGVCAKLLGGLVDLTIGKPPVTPCCTLVEGLADLEAAVCLCTAIKASVLGNKIKIP 120

Query: 121 LSLSLLLNVCQKNVPKGFQC 141
           L LSLLLNVC KN+P GFQC
Sbjct: 121 LHLSLLLNVCNKNLPNGFQC 136

[Close]

BLAST of Lsi09G004140 vs. NCBI nr
Match: gi|778700007|ref|XP_004152411.2| (PREDICTED: 14 kDa proline-rich protein DC2.15-like [Cucumis sativus])

HSP 1 Score: 230.3 bits (586), Expect = 2.0e-57
Identity = 113/140 (80.71%), Postives = 126/140 (90.00%), Query Frame = 1


Query: 1   MASKATASLAFLLSLNLLFFSLVSACNNCYVPNPPKPKPCPPTKPTPKPSPSSGYGKCPR 60
           MASKA+ASLAFLLSLNLLFF+ VSAC+NCYVP PPKPKPCPPTKP    +P S YGKCP+
Sbjct: 1   MASKASASLAFLLSLNLLFFTFVSACDNCYVPAPPKPKPCPPTKP----NPPSNYGKCPK 60

Query: 61  DTLKLGVCAKLLGGLVDITIGKPPVTPCCSLIEGLADLEAAVCLCTAIKASILGTNLNIP 120
           DTLK+GVCAKLLGGLVD+TIGKPPVTPCC+L++GLADLEAAVCLCTAIKAS+LG  + IP
Sbjct: 61  DTLKIGVCAKLLGGLVDLTIGKPPVTPCCTLVKGLADLEAAVCLCTAIKASVLGNKIKIP 120

Query: 121 LSLSLLLNVCQKNVPKGFQC 141
           L LSLLLNVC KN+P GFQC
Sbjct: 121 LHLSLLLNVCNKNLPNGFQC 136

[Close]

BLAST of Lsi09G004140 vs. NCBI nr
Match: gi|778700004|ref|XP_011654795.1| (PREDICTED: 14 kDa proline-rich protein DC2.15-like [Cucumis sativus])

HSP 1 Score: 229.9 bits (585), Expect = 2.6e-57
Identity = 113/140 (80.71%), Postives = 125/140 (89.29%), Query Frame = 1


Query: 1   MASKATASLAFLLSLNLLFFSLVSACNNCYVPNPPKPKPCPPTKPTPKPSPSSGYGKCPR 60
           MASKATASLAFLLSLNLLFF+ VSAC+NCYVP PPKPKPCPPTKP    +P S YGKCP+
Sbjct: 1   MASKATASLAFLLSLNLLFFTFVSACDNCYVPAPPKPKPCPPTKP----NPPSNYGKCPK 60

Query: 61  DTLKLGVCAKLLGGLVDITIGKPPVTPCCSLIEGLADLEAAVCLCTAIKASILGTNLNIP 120
           D LK+GVCAKLLGGLVD+TIGKPPVTPCC+L++GLADLEAAVCLCTAIKAS+LG  + IP
Sbjct: 61  DALKIGVCAKLLGGLVDLTIGKPPVTPCCTLVQGLADLEAAVCLCTAIKASVLGKTIKIP 120

Query: 121 LSLSLLLNVCQKNVPKGFQC 141
           L LSLLLNVC KN+P GFQC
Sbjct: 121 LHLSLLLNVCNKNLPNGFQC 136

The following BLAST results are available for this feature:

BLAST of Lsi09G004140 vs. Swiss-Prot


Match Name	E-value	Identity	Description
14KD_DAUCA	6.5e-40	62.14	14 kDa proline-rich protein DC2.15 OS=Daucus carota PE=2 SV=1	[more]
ERLI1_ARATH	2.2e-35	48.50	Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana GN=EARLI1 PE=1 SV=1	[more]
ERLL1_ARATH	5.4e-34	51.25	pEARLI1-like lipid transfer protein 1 OS=Arabidopsis thaliana GN=AZI1 PE=1 SV=1	[more]
ERLL2_ARATH	8.6e-32	44.20	pEARLI1-like lipid transfer protein 2 OS=Arabidopsis thaliana GN=At4g12490 PE=2 ...	[more]
ERLL3_ARATH	1.5e-31	43.75	pEARLI1-like lipid transfer protein 3 OS=Arabidopsis thaliana GN=At4g12500 PE=2 ...	[more]

BLAST of Lsi09G004140 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KR89_CUCSA	4.7e-69	94.29	HyPRP2 OS=Cucumis sativus GN=Csa_5G161900 PE=4 SV=1	[more]
A0A0A0KKL9_CUCSA	1.4e-57	80.71	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G161890 PE=4 SV=1	[more]
A0A0A0KP86_CUCSA	1.8e-57	80.71	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G161860 PE=4 SV=1	[more]
A0A0A0KMW2_CUCSA	2.4e-57	80.71	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G161880 PE=4 SV=1	[more]
A0A0A0KKU4_CUCSA	1.4e-52	76.43	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G161870 PE=4 SV=1	[more]

BLAST of Lsi09G004140 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G62510.1	1.5e-50	67.11	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT1G12090.1	2.9e-46	66.18	extensin-like protein	[more]
AT4G12510.1	7.2e-37	58.57	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT4G12520.1	7.2e-37	58.57	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT4G12480.1	1.2e-36	48.50	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]

BLAST of Lsi09G004140 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778700010\|ref\|XP_004152410.2\|	6.7e-69	94.29	PREDICTED: 14 kDa proline-rich protein DC2.15-like [Cucumis sativus]	[more]
gi\|659073515\|ref\|XP_008437101.1\|	8.8e-69	94.29	PREDICTED: 14 kDa proline-rich protein DC2.15-like [Cucumis melo]	[more]
gi\|659073517\|ref\|XP_008437102.1\|	2.4e-58	82.14	PREDICTED: 14 kDa proline-rich protein DC2.15-like [Cucumis melo]	[more]
gi\|778700007\|ref\|XP_004152411.2\|	2.0e-57	80.71	PREDICTED: 14 kDa proline-rich protein DC2.15-like [Cucumis sativus]	[more]
gi\|778700004\|ref\|XP_011654795.1\|	2.6e-57	80.71	PREDICTED: 14 kDa proline-rich protein DC2.15-like [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR027923	Hydrophob_seed
IPR016140	Bifunc_inhib/LTP/seed_store

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G004140.1	Lsi09G004140.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 58..140 score: 7.
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	unknown	SSF47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 60..140 score: 2.02
IPR027923	Hydrophobic seed protein	PFAM	PF14547	Hydrophob_seed	coord: 57..140 score: 4.9
None	No IPR available	GENE3D	G3DSA:1.10.110.10		coord: 56..140 score: 7.7
None	No IPR available	PANTHER	PTHR31731	FAMILY NOT NAMED	coord: 1..140 score: 1.2
None	No IPR available	PANTHER	PTHR31731:SF26	SUBFAMILY NOT NAMED	coord: 1..140 score: 1.2
None	No IPR available	PROFILE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..26 score:

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi09G004140	Bhi12G000405	Wax gourd	lsiwgoB010
Lsi09G004140	CsGy3G002800	Cucumber (Gy14) v2	cgyblsiB142

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi09G004140	Watermelon (Charleston Gray)	lsiwcgB007
Lsi09G004140	Watermelon (Charleston Gray)	lsiwcgB008
Lsi09G004140	Watermelon (97103) v1	lsiwmB008
Lsi09G004140	Watermelon (97103) v1	lsiwmB027
Lsi09G004140	Cucumber (Gy14) v2	cgyblsiB294
Lsi09G004140	Melon (DHL92) v3.6.1	lsimedB012
Lsi09G004140	Silver-seed gourd	carlsiB834
Lsi09G004140	Cucumber (Chinese Long) v3	cuclsiB172
Lsi09G004140	Cucumber (Chinese Long) v3	cuclsiB345
Lsi09G004140	Watermelon (97103) v2	lsiwmbB007
Lsi09G004140	Bottle gourd (USVL1VR-Ls)	lsilsiB019
Lsi09G004140	Cucumber (Gy14) v1	cgylsiB487
Lsi09G004140	Cucumber (Gy14) v1	cgylsiB526
Lsi09G004140	Cucurbita maxima (Rimu)	cmalsiB267
Lsi09G004140	Cucurbita maxima (Rimu)	cmalsiB537
Lsi09G004140	Cucurbita moschata (Rifu)	cmolsiB255
Lsi09G004140	Cucurbita moschata (Rifu)	cmolsiB522
Lsi09G004140	Cucurbita pepo (Zucchini)	cpelsiB131
Lsi09G004140	Cucurbita pepo (Zucchini)	cpelsiB580
Lsi09G004140	Wild cucumber (PI 183967)	cpilsiB154
Lsi09G004140	Wild cucumber (PI 183967)	cpilsiB322
Lsi09G004140	Cucumber (Chinese Long) v2	culsiB155
Lsi09G004140	Cucumber (Chinese Long) v2	culsiB322
Lsi09G004140	Melon (DHL92) v3.5.1	lsimeB012
Lsi09G004140	Melon (DHL92) v3.5.1	lsimeB030