Lsi09G004060 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.CCGAAACCCAATTGGACGTCTGAGTGAGAGTGGCAGAGCGCGCGAAATCACCAAAAACAGCGCCTTCTCTTTTCTCCTTCTTCCTTCTTCCTCCTTTCTCCTTCTGTTTCTTATTTCCCCTTTTTTTTGTAATTTACCCATTTCTCTCTCAAATCCCCTCTTCACAGCGGCCACAGTTTCCAACCATTTCTCCATTTTTATTTATACTCAAATCCCCTCTCTGTTTCTTCTCCTTCTTTGCCTTCAACCCATTTCCTCTCTCCCCTTCTTTTTCTCCCTTTCCATAACCTTTTCAACTGCCTTCTCTCATCCATTGAGTGAGTTAGAGGGGCTTATAATCCCTCTTTTCACCTTTATCTTGTTTCCTTGGTCTAAGCTTTCACAATGTCAGCTTACAGAGACGAAGATCCTCGCATCCATGGCATCAGGACTAAGATTCGTGTTGTCCCTAATTTCCCTCAACCAGGTTTGCCTCTCTTCATATTTCTTTAAAAACCCTTTCGCTGTTTTGGGCAACTCTGTGAATTTTACTGCATGTGTCGGTCAAATTGAAGTTAAATGTCCTTTTTTCTTGTCAAATGGATTCTGGGGTTCGTTCTTTTTAAGGGAAGAATATGATTTTTTTTTTTCAAATTTGTTGGGTGTTTACTTTATAATGAGAGAACCCCTTTTTTGTTTTAATAATGTTTTTTTCTCTCCTGTTGATGGGTGTAATGACAGGTATCATGTTCCAAGACATAACCACTCTGCTACTCGACCCCAAAGCATTCAAAGATACTATTGATTTGTTCGTCGAGCGATACAAAGGGAAAAACATTTCGGTTGTTGCAGGTGAAAAGGAAATAAAATATTTATTATTTTTTTTTCCATTTTTGAGTAAAGATTAATGTATTCTGGCTTCGATGAGGATGATCCAAAGCTGGGTAGAAACTTGTCGCTTTTGATTAGCCTGAAGATGGCGGGGTCCATTCTTTCGAGAAAAAGTAGCTTTAAATGATGCACAAGTGCCCCCATTGCATGAATTTCCGGTTGTTTTTTATAATGCTTTTGGTACAATTTAATCATTGATGACTGGAAGTGACTGTGGTTTTGGGAGTGATTCTATGTTTGACTATGAGCTTTATTGGTGGGCTATGCCACTGATTGCTGTATGTGACCATTTTTTACCTGATCAGCTAATACTGGTTCTCTCTCTCTCTGCCTTCTGCTTTCTCTTTCTTTGGCCATGTGATTCATATTTGTATGCATTGAGGCTGGGGATAGATTTTTACATTGAACCATGACATTTTGGCTCCACCATAATGTGAATCTCCTTTTTTTTTTTTTTTCCAGTCAATTGTTGGTTTACTTTATCCACATTTCTATCATTTAGATTCATGCCCATGCCCTTCGTTTCCTGTCAAAAACAGAAACTCTCTTTCTTTAAAGTTAACACTGTTGAACATCTTGAAATTTTTTCTTTGTTGTCTATAGTTTTTATTTATTGTGGTTGTCCTGTTTAAAGTACAGTTTACATCATTATTTATTATTTCTAGTACTTCTTTTGGATTAACCTCTGATGATAACGTCTAATGAAGAGTATTTGTAATAGTACAAACTGATTGAGAATATCTGGGGTTGAAGAGAAATAACGACCACAAATTAATATTTCTAGTACTGACATGACACCGTGATGGTTGTAGGATAACAAACTTTGCATTATAATCTTAATCCATTAACTCCAGCTTCATTTCTGTCAATCACTGTGATGGTCCTCTGATGATTTAAAACCTTTTCATTACTGTGCTCAGTGGACTTTAGTGGCTCCATATATTCATATCAACCTTGCATTAATGCAGATCTTCTTTTACAAATAACCTAATTCTTATCCAAATATGAAATAAGTATGTGCTTATCATTTCTGTTAATGTGTCTTTTATCAAATGGGGATATGTGATTCAATTCAGGGAATTCAGCTCAAAGATTTTGCGTCCATGTTTTATCAAGGAAATGTGGCCCTTTACTTTGAAATTGTAGTACTCGATCAGATTCACAGTTTATGAAGTTTTATCCCTTTATTTTGACCAGCACTCACTTGTCATTTAGCCAGTAAATAAATCTCTGGTTCTCTTGTGATATTGATATCATGATTGAGATTAACTAGTTCTTAATTTGACCCAGTTTCTCTAATTCATTTCAAGCATTATTTTCTTCCCAAGTAGTTTCAAGCATTTATACACTTGCTTGGCTCGTTTTGCTGCCCTGCTTACTTTCCTTTTTTAAGCAACCTAGCTACATCTTTTAATATCATGTTTTTCTGTCTAGAAATGATGTGGTTTACGTATTACCCCTTCGATCAAAGTAATATCATGCCATCCACATTGATTTCTGAAATCTAAGCTTGCTTGTCAGGAATTGAAGCTCGAGGTTTTATATTTGGCCCTCCAATTGCATTGGCTATAGGAGCAAAATTTGTTCCTTTAAGAAAACCAAGGAAGCTACCTGGTAATCATTTATACCTATTATGCATTCGTTTGACTAAGTGTTCTCTTCCTTCCCTCTGGCACAAACGTGTTTGATCTAGAAAACTATTCCCCATGGAGTTCTGCTTTTCCAAAGTGTAAGCCATACACGAAATGGTCTTCACACTCCTTTTCCTGGGTTCATGTGATTGTGCATTAAACTAATTTTTTCACATGGGTTCAAGTATTCACTTGGCTTAACCTTTTGCCTCCTCCAAGTTTCTCTTTATACCTTCAAGACAAGGTGGCTGTACTAAAGTGGTTGTTATTAGTATTCATGGCACGTTTGCAGTGATTATGAAAGGGTTAAAATCAATTTTGTCATGTTCAAAATCACTCTGAAACATGTATTTAATGATTCAAAATTAATTTAATATTTAATTTTACGCTTTCAAATGTGATTTCTTACTAGTAAAATTTATTTAATTGACTAAAAGCATTTTTTGGTGCGATTTTAACCATTTTTAAACTCCCAAATATGCCCTTAGTAGTAATCAATCATCATTGTACCTTCCATATTCCGTGCATGAGATAAATTACCAGATTTTTGTGGAGTACATTGAATTAAATTAGAAGGTGGATTTCTGGTCCTGTATTCATGCTGGAAGCATAAGTTGAATTATCTTAGATCCTGGATAAACAAATTTCTTTCTATATCATTAATGAATTTCAATCAATTATCACCATATCAGGGGAAGTTATTTCTGAAAAGTACATATTAGAATATGGAAGTGATTGCCTGGAGATGCATGTTGGAGCCGTCAAACCACATGAACAGGCCTTGGTAGTGGACGACTTGATTGCGACAGGTGGCACTCTTCGTGCAGCTATGAATTTACTTGGTGAGCTACCTTTGATATTCTTATAGAAGCTAAAGAAGTTTTTTTTTTAAGTTCAATGATTGTGGGTGAGGATATCGAACCTTCAACTTTTGGGATGACAATTGATGCCTTAACCAATGAGTTACGTCCTTATATAGTTGGATATTATGACTTATGCCATAAGAACTATTTGCTAACGGTAGAAAAATCTATCATATAAAGACTGCAATTTTGGGTCCAGATTTGATGCCTGTTTTTGTTTGATATGAGGTCCTTTTGTCATTTAAAGTCTTCCTTTTGTCATTTAAAGTCTTAGGCAGTACTTTGAGGCTTTAGTATAAAGACAGTGCATAAACAGAGATTCTGTACTTTCTGCAGAATTTGTCTGTTTCAGAAAACAAGACAAATAATTGATGTTATAGTTCAATATCACCTGACTAGTGAGTATAGATTCTAATAAGTATACATGACGAAACCTGGACATGAAACCTTATATATTGATCATATAAGTTATTTCAGAACCTTGGTTTGATGTAATATTGTTTTAAACTGCTCATTCTGTTGTCTGGTGTTCTATATAAGAAACATTAACATATCTTTTGTTATTATTCAAGTATTTGTAATCTAAATTCATTGTTTTTCAGAGCGTGTTGGAGCTGAAGTAATTGAATGTGCTTGCGTCATTGAATTGCCAGATTTAAAGGTGTGCATGACTCTTAAACTCCTTTTTTCAATAGTTATAAAGTTCAAAGTTGGTGGAATAGTTAGTTAGTACTTGTTTGGCTTTTTCTATAACTTTTTCCCCTTGTTTTTATTTTCTTTATTTTAATTATTATTTTTTGTGACCATATATGATTATATCACAAATTTGAGATTACAACATCTAAAAGTTTTAATACTTCGTTTGCACATAGTTACTTAAGAAGGAACGAATATTCTAACCACCATTTGCTGACAAAGTGACAAGTTATTAACATTTGTTTTTCCTTCAGCAACCGCAAGTCTTGACTAGTCTAAGTTGACATTAGTTATTGATTTCAATGTTCTTTTGTTGGATTAGAGAAATCACGCCATTAGAATTATGATACTGATAGTGAAATGTTGACAAGGACTATTTTCTAAGATTTCTCTGTTTTCTTCTTAATTGCTTCTTAGATAACTTAAATGTAGGATTAGGACAAGTTAAGTTATTCTTCATGCTGAAACTATAGACGTGTAGAATAGTAGTTAGGAGCATGTTTGGAATGACGAGATTTCAAAGAGACTCTAAAGCTACAATAACTTGATTTTGAACTACCCTGCATCGTTCTTTTAAACAGTTTTGAAAAGAAAAACAAAAAGTTGCCTATGAAAACCTTCTAGATAGGAGGACTTATTTGGTGAGACTGCCACAATGTATTCATGAGTTTTTACTGTTAGATTATGAGAGAAAAGTATCTCAAATTTATATCCAATAGTTATTAGAAGATAGGTAGATTTTTTAATCCATATCCGTAGTCACACGGAATAATTTGTCCCAAATAATGGAGTATGGTTAGGTGAATTGCTGCAGCCACTGGTTACATTTTCCTGTTTCCGTAGACCCCTCTGTATATGAAGCCAAGTTACTTAATATTGGATTGATTGATAAGATTCAAGAGTTATCTCAATGAATGTGCATTCATGTATGAACTGAACTCGAGGGTAATATTTTGACATCCGTTGTCGATAAATGCTACACCAATGTTTTCCTTGATGATGCAGGGTCGGGAGCGGTTGAATGGTAAGCCATTGTTCGTGCTAGTAGAGTATCAATAATGCAGGAAGATGAGCTTTCATCCATTGATGCACCAAAGAAGGAGATTGCATCTGAGTAT CCGAAACCCAATTGGACGTCTGAGTGAGAGTGGCAGAGCGCGCGAAATCACCAAAAACAGCGCCTTCTCTTTTCTCCTTCTTCCTTCTTCCTCCTTTCTCCTTCTGTTTCTTATTTCCCCTTTTTTTTGTAATTTACCCATTTCTCTCTCAAATCCCCTCTTCACAGCGGCCACAGTTTCCAACCATTTCTCCATTTTTATTTATACTCAAATCCCCTCTCTGTTTCTTCTCCTTCTTTGCCTTCAACCCATTTCCTCTCTCCCCTTCTTTTTCTCCCTTTCCATAACCTTTTCAACTGCCTTCTCTCATCCATTGAGTGAGTTAGAGGGGCTTATAATCCCTCTTTTCACCTTTATCTTGTTTCCTTGGTCTAAGCTTTCACAATGTCAGCTTACAGAGACGAAGATCCTCGCATCCATGGCATCAGGACTAAGATTCGTGTTGTCCCTAATTTCCCTCAACCAGGTATCATGTTCCAAGACATAACCACTCTGCTACTCGACCCCAAAGCATTCAAAGATACTATTGATTTGTTCGTCGAGCGATACAAAGGGAAAAACATTTCGGTTGTTGCAGGAATTGAAGCTCGAGGTTTTATATTTGGCCCTCCAATTGCATTGGCTATAGGAGCAAAATTTGTTCCTTTAAGAAAACCAAGGAAGCTACCTGGGGAAGTTATTTCTGAAAAGTACATATTAGAATATGGAAGTGATTGCCTGGAGATGCATGTTGGAGCCGTCAAACCACATGAACAGGCCTTGGTAGTGGACGACTTGATTGCGACAGAGCGTGTTGGAGCTGAAGTAATTGAATGTGCTTGCGTCATTGAATTGCCAGATTTAAAGGAAGATGAGCTTTCATCCATTGATGCACCAAAGAAGGAGATTGCATCTGAGTAT ATGTCAGCTTACAGAGACGAAGATCCTCGCATCCATGGCATCAGGACTAAGATTCGTGTTGTCCCTAATTTCCCTCAACCAGGTATCATGTTCCAAGACATAACCACTCTGCTACTCGACCCCAAAGCATTCAAAGATACTATTGATTTGTTCGTCGAGCGATACAAAGGGAAAAACATTTCGGTTGTTGCAGGAATTGAAGCTCGAGGTTTTATATTTGGCCCTCCAATTGCATTGGCTATAGGAGCAAAATTTGTTCCTTTAAGAAAACCAAGGAAGCTACCTGGGGAAGTTATTTCTGAAAAGTACATATTAGAATATGGAAGTGATTGCCTGGAGATGCATGTTGGAGCCGTCAAACCACATGAACAGGCCTTGGTAGTGGACGACTTGATTGCGACAGAGCGTGTTGGAGCTGAAGTAATTGAATGTGCTTGCGTCATTGAATTGCCAGATTTAAAGGAAGATGAGCTTTCATCCATTGATGCACCAAAGAAGGAGATTGCATCTGAGTAT MSAYRDEDPRIHGIRTKIRVVPNFPQPGIMFQDITTLLLDPKAFKDTIDLFVERYKGKNISVVAGIEARGFIFGPPIALAIGAKFVPLRKPRKLPGEVISEKYILEYGSDCLEMHVGAVKPHEQALVVDDLIATERVGAEVIECACVIELPDLKEDELSSIDAPKKEIASEY
BLAST of Lsi09G004060 vs. Swiss-Prot
Match: APT3_ARATH (Adenine phosphoribosyltransferase 3 OS=Arabidopsis thaliana GN=APT3 PE=1 SV=1) HSP 1 Score: 249.6 bits (636), Expect = 2.5e-65 Identity = 125/160 (78.12%), Postives = 141/160 (88.12%), Query Frame = 1
BLAST of Lsi09G004060 vs. Swiss-Prot
Match: APT4_ARATH (Adenine phosphoribosyltransferase 4 OS=Arabidopsis thaliana GN=APT4 PE=1 SV=1) HSP 1 Score: 238.4 bits (607), Expect = 5.7e-62 Identity = 126/168 (75.00%), Postives = 139/168 (82.74%), Query Frame = 1
BLAST of Lsi09G004060 vs. Swiss-Prot
Match: APT1_WHEAT (Adenine phosphoribosyltransferase 1 OS=Triticum aestivum GN=APT1 PE=2 SV=1) HSP 1 Score: 233.0 bits (593), Expect = 2.4e-60 Identity = 113/158 (71.52%), Postives = 136/158 (86.08%), Query Frame = 1
BLAST of Lsi09G004060 vs. Swiss-Prot
Match: APT1_ARATH (Adenine phosphoribosyltransferase 1, chloroplastic OS=Arabidopsis thaliana GN=APT1 PE=1 SV=2) HSP 1 Score: 232.3 bits (591), Expect = 4.1e-60 Identity = 114/162 (70.37%), Postives = 137/162 (84.57%), Query Frame = 1
BLAST of Lsi09G004060 vs. Swiss-Prot
Match: APT2_ARATH (Adenine phosphoribosyltransferase 2 OS=Arabidopsis thaliana GN=APT2 PE=1 SV=1) HSP 1 Score: 216.5 bits (550), Expect = 2.3e-55 Identity = 108/158 (68.35%), Postives = 124/158 (78.48%), Query Frame = 1
BLAST of Lsi09G004060 vs. TrEMBL
Match: A0A0A0KKK5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G160770 PE=3 SV=1) HSP 1 Score: 295.0 bits (754), Expect = 5.7e-77 Identity = 150/168 (89.29%), Postives = 153/168 (91.07%), Query Frame = 1
BLAST of Lsi09G004060 vs. TrEMBL
Match: B9N3Q8_POPTR (MtN30 family protein OS=Populus trichocarpa GN=POPTR_0001s00360g PE=3 SV=1) HSP 1 Score: 282.3 bits (721), Expect = 3.8e-73 Identity = 144/168 (85.71%), Postives = 150/168 (89.29%), Query Frame = 1
BLAST of Lsi09G004060 vs. TrEMBL
Match: A0A067K1H8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20795 PE=3 SV=1) HSP 1 Score: 281.6 bits (719), Expect = 6.6e-73 Identity = 143/168 (85.12%), Postives = 150/168 (89.29%), Query Frame = 1
BLAST of Lsi09G004060 vs. TrEMBL
Match: B9SUX1_RICCO (Adenine phosphoribosyltransferase, putative OS=Ricinus communis GN=RCOM_0250980 PE=3 SV=1) HSP 1 Score: 277.7 bits (709), Expect = 9.5e-72 Identity = 142/168 (84.52%), Postives = 150/168 (89.29%), Query Frame = 1
BLAST of Lsi09G004060 vs. TrEMBL
Match: A0A061G4R7_THECC (Adenine phosphoribosyl transferase 4 OS=Theobroma cacao GN=TCM_016011 PE=3 SV=1) HSP 1 Score: 277.7 bits (709), Expect = 9.5e-72 Identity = 138/168 (82.14%), Postives = 152/168 (90.48%), Query Frame = 1
BLAST of Lsi09G004060 vs. TAIR10
Match: AT4G22570.1 (AT4G22570.1 adenine phosphoribosyl transferase 3) HSP 1 Score: 249.6 bits (636), Expect = 1.4e-66 Identity = 125/160 (78.12%), Postives = 141/160 (88.12%), Query Frame = 1
BLAST of Lsi09G004060 vs. TAIR10
Match: AT4G12440.2 (AT4G12440.2 adenine phosphoribosyl transferase 4) HSP 1 Score: 238.4 bits (607), Expect = 3.2e-63 Identity = 126/168 (75.00%), Postives = 139/168 (82.74%), Query Frame = 1
BLAST of Lsi09G004060 vs. TAIR10
Match: AT1G27450.3 (AT1G27450.3 adenine phosphoribosyl transferase 1) HSP 1 Score: 218.4 bits (555), Expect = 3.5e-57 Identity = 114/187 (60.96%), Postives = 137/187 (73.26%), Query Frame = 1
BLAST of Lsi09G004060 vs. TAIR10
Match: AT1G80050.1 (AT1G80050.1 adenine phosphoribosyl transferase 2) HSP 1 Score: 216.5 bits (550), Expect = 1.3e-56 Identity = 108/158 (68.35%), Postives = 124/158 (78.48%), Query Frame = 1
BLAST of Lsi09G004060 vs. TAIR10
Match: AT5G11160.1 (AT5G11160.1 adenine phosphoribosyltransferase 5) HSP 1 Score: 216.1 bits (549), Expect = 1.7e-56 Identity = 108/158 (68.35%), Postives = 125/158 (79.11%), Query Frame = 1
BLAST of Lsi09G004060 vs. NCBI nr
Match: gi|449459716|ref|XP_004147592.1| (PREDICTED: adenine phosphoribosyltransferase 3-like [Cucumis sativus]) HSP 1 Score: 295.0 bits (754), Expect = 8.2e-77 Identity = 150/168 (89.29%), Postives = 153/168 (91.07%), Query Frame = 1
BLAST of Lsi09G004060 vs. NCBI nr
Match: gi|659073548|ref|XP_008437119.1| (PREDICTED: adenine phosphoribosyltransferase 1-like [Cucumis melo]) HSP 1 Score: 294.3 bits (752), Expect = 1.4e-76 Identity = 150/168 (89.29%), Postives = 153/168 (91.07%), Query Frame = 1
BLAST of Lsi09G004060 vs. NCBI nr
Match: gi|731438657|ref|XP_002268529.3| (PREDICTED: adenine phosphoribosyltransferase 3 [Vitis vinifera]) HSP 1 Score: 283.1 bits (723), Expect = 3.2e-73 Identity = 142/165 (86.06%), Postives = 151/165 (91.52%), Query Frame = 1
BLAST of Lsi09G004060 vs. NCBI nr
Match: gi|566146331|ref|XP_006368184.1| (MtN30 family protein [Populus trichocarpa]) HSP 1 Score: 282.3 bits (721), Expect = 5.5e-73 Identity = 144/168 (85.71%), Postives = 150/168 (89.29%), Query Frame = 1
BLAST of Lsi09G004060 vs. NCBI nr
Match: gi|743808524|ref|XP_011018282.1| (PREDICTED: adenine phosphoribosyltransferase 3 isoform X1 [Populus euphratica]) HSP 1 Score: 282.0 bits (720), Expect = 7.2e-73 Identity = 142/165 (86.06%), Postives = 149/165 (90.30%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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