Lsi09G003550 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi09G003550
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Blue copper protein
Location	chr09 : 3696290 .. 3698501 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ACATTTTTTGTCCCTAAAGTTTTGGCAATAACCAATTATACAGTCGGAGATAAAAGCGGATGGACCACTGGAGTTGACTTCTCATCTTGGACTATTGGCAAAACTTTCTTTGTTGGCGATAATCTCGGTAAATTATTTTGCTTAGTTATTTTTTTCGCATTTTAGAGTGCAAAAATTGCTGGGATGAGATGAGAGATCAAACCTCCAATCTCAAAAGGATGAATGCATGTCAATACTTTAGCTTTTCTTAATTGTTAGTTAGATTTATTCTTAATTTAACTCTTTCCTTTAGTTGTTTTTCCTCTTTTGGAGTGCAACAATCACGAAAATGAGAGATCAAACTTCTAATCTCATAAGAATGAATGCATGTCAATACTTTAGCTTCTCCTTAATTGTTAGCTTAACTTATTCGTACTTGTTTATCAAATTTTGTCATAAAATTTCATTTTCATCCAGCTAAACACTAGATTTGGAGATGGAATTTATCTCCATGCGTAGAAAATGTATATAAAGTAATTAATATTGTTTCGAAAGTATTCTCTTAAAAATATCCCTAATATATATATATTTTTGGTAAATGGGTTGGTGTGAAATCTCTAAATTCAAAAGTAGTAGATGTCTTTAAACACCGAGTTATGTTTAGCAGAAAGAGTAAGCTAATTAATTATCGAGAAATACTTTTTGCCCAGGCTATACTCAATTTCAATGTATCTCTTCGATCATAAGGAAAACAAATATTAAAATAATCTTTAAAAAAAAAAAAAATTGGCCATGCAATGATTGGACACTTTGAATGAGATGCATGAAGATAAAGAAACTCGGATGCATCTAAATATTTTTCTTAGGTATCTCCTAAACGACAATTTCTTTGTTTTATGTTATCTAGTTGTTAGAAATGTTTTTATAATTCAAGCTAGCTTTTGAAACTTCACACGAACAATTTCTTTATAAATATTTAATTGAATTTGGCTAAGAATTCAAATGTTCTCTTAAAAAATATGAAAATTATTGTAGAAAATTGTGAAAAAATAATGCACAAGTTTCTAAACATCTAAGTTTGTATAGATTTGATCCCTAAATTTTAAAAAGCATCTTATAAAGTTCTTGAACTTTAAATTTTGTATCTATTTAATTTTAAAGTCTATTTAATTTTAAACTTAAAGAAATATCTTTAATAGAAGAGTTAGAGAGAATGAGTTCAATTCATGGTAGCTACCTATTTAAAATTTAATATCCTACGGATTTCCTTAACACTCAAATATGTTGTAAGGTCAAGCAGATTGTTCTATGAGATTAATAGAAGTGTGATATGCTTGTTTGGACACTCACAAATTAAAAATAAATTAATTAAGTGTCTAATAGATCATTCACTTTCATTTTTATATCGAATATAGGTCATATTTATATTAAAATATGGTAAATGTTTAATTGTTTTAATAGATATACAAATTATAAACCATTGATAATTTTATGTCTAATGAAACTCTAAATTTTTAATTTTGTATTTAGTACGAATTTAAAAGAAATATCGGATATGCCCATGGCTATTAGAGGTTAAAAATTAAAATACCTATAAAATACAAAATTATTATTTCTTTTTAGGAACAAAATTAAGATTTTATGTGGAATTTTGTTTGTAGTATTCAAGTATGAGAAAGGGAAGCACAACGTATTAGACGTGGACGTCTCCTCGTTCTCGCAGTGCGCTACGCCGAAAGACAAACAGCCTATGGTTACCGGAAACGATGTCGTTCCATTGACTACTCCCGGAATCAAATGGTTCATTTGTAACATTGCCAACCACTGTAACTCCGGCCAGAAGCTTGTCATTTCAGTCGAGACCCCGCCGCCCCCCGCCGGACAGGCTCCTCCAACGCCACCCACCGCCGGACAGGCACCTTCACCGCCGCCCATCCCCACACAGGCTCCTCCAACGCCGCCCGCTGACGGAAAGTCTCCTCCATCGGCGCTAGTCCCGGCTCTGCCGCCATCGTCGCCCCCAGCCTCTCCTCCTTCAGTGCCACCGCCTGGTCGGAACCAAACTGCCCCACATTTCCCTATCGCTCCAACTCCAACCCAAAACATCCCACCATCGGAATCGCCTGTTCCGAGTCCCACCACTGCTGCTCCGCCGCCGTCCGGAGCTGCCGCAAAATCAACTGTTTCCGGGATTATGGCGGTGGCGATTGGCGTTCTTGCTGGGATAATGATA

mRNA sequence

ACATTTTTTGTCCCTAAAGTTTTGGCAATAACCAATTATACAGTCGGAGATAAAAGCGGATGGACCACTGGAGTTGACTTCTCATCTTGGACTATTGGCAAAACTTTCTTTGTTGGCGATAATCTCGGGAAGCACAACGTATTAGACGTGGACGTCTCCTCGTTCTCGCAGTGCGCTACGCCGAAAGACAAACAGCCTATGGTTACCGGAAACGATGTCGTTCCATTGACTACTCCCGGAATCAAATGGTTCATTTGTAACATTGCCAACCACTGTAACTCCGGCCAGAAGCTTGTCATTTCAGTCGAGACCCCGCCGCCCCCCGCCGGACAGGCTCCTCCAACGCCACCCACCGCCGGACAGGCACCTTCACCGCCGCCCATCCCCACACAGGCTCCTCCAACGCCGCCCGCTGACGGAAAGTCTCCTCCATCGGCGCTAGTCCCGGCTCTGCCGCCATCGTCGCCCCCAGCCTCTCCTCCTTCAGTGCCACCGCCTGGTCGGAACCAAACTGCCCCACATTTCCCTATCGCTCCAACTCCAACCCAAAACATCCCACCATCGGAATCGCCTGTTCCGAGTCCCACCACTGCTGCTCCGCCGCCGTCCGGAGCTGCCGCAAAATCAACTGTTTCCGGGATTATGGCGGTGGCGATTGGCGTTCTTGCTGGGATAATGATA

Coding sequence (CDS)

ACATTTTTTGTCCCTAAAGTTTTGGCAATAACCAATTATACAGTCGGAGATAAAAGCGGATGGACCACTGGAGTTGACTTCTCATCTTGGACTATTGGCAAAACTTTCTTTGTTGGCGATAATCTCGGGAAGCACAACGTATTAGACGTGGACGTCTCCTCGTTCTCGCAGTGCGCTACGCCGAAAGACAAACAGCCTATGGTTACCGGAAACGATGTCGTTCCATTGACTACTCCCGGAATCAAATGGTTCATTTGTAACATTGCCAACCACTGTAACTCCGGCCAGAAGCTTGTCATTTCAGTCGAGACCCCGCCGCCCCCCGCCGGACAGGCTCCTCCAACGCCACCCACCGCCGGACAGGCACCTTCACCGCCGCCCATCCCCACACAGGCTCCTCCAACGCCGCCCGCTGACGGAAAGTCTCCTCCATCGGCGCTAGTCCCGGCTCTGCCGCCATCGTCGCCCCCAGCCTCTCCTCCTTCAGTGCCACCGCCTGGTCGGAACCAAACTGCCCCACATTTCCCTATCGCTCCAACTCCAACCCAAAACATCCCACCATCGGAATCGCCTGTTCCGAGTCCCACCACTGCTGCTCCGCCGCCGTCCGGAGCTGCCGCAAAATCAACTGTTTCCGGGATTATGGCGGTGGCGATTGGCGTTCTTGCTGGGATAATGATA

Protein sequence

TFFVPKVLAITNYTVGDKSGWTTGVDFSSWTIGKTFFVGDNLGKHNVLDVDVSSFSQCATPKDKQPMVTGNDVVPLTTPGIKWFICNIANHCNSGQKLVISVETPPPPAGQAPPTPPTAGQAPSPPPIPTQAPPTPPADGKSPPSALVPALPPSSPPASPPSVPPPGRNQTAPHFPIAPTPTQNIPPSESPVPSPTTAAPPPSGAAAKSTVSGIMAVAIGVLAGIMI

Homology

[Close]

BLAST of Lsi09G003550 vs. Swiss-Prot
Match: BCB3_ARATH (Uclacyanin-3 OS=Arabidopsis thaliana GN=UCC3 PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 9.0e-15
Identity = 82/230 (35.65%), Postives = 109/230 (47.39%), Query Frame = 1


Query: 4   VPKVLAITNYTVGDKSGWTTGVDFSSWTIGKTFFVGDNLG-----KHNVLDVDVSSFSQC 63
           VP V A T + VGD SGWT+ +D++ W  GKTF VGD L       H+V  VD + +  C
Sbjct: 16  VPAVFAAT-FKVGDISGWTSNLDYTVWLTGKTFRVGDTLEFVYGLSHSVSVVDKAGYDNC 75

Query: 64  ATPKDKQPMVTGNDVVPLTTPGIKWFICNIANHCNSGQKLVISVETPPPPAGQAPPTPPT 123
            +    Q    G+  + LTT G   F+C    HC +G KL + V     P+   P +PP+
Sbjct: 76  DSSGATQNFADGDTKIDLTTVGTMHFLCPTFGHCKNGMKLAVPV-LAAAPSPSTPSSPPS 135

Query: 124 AGQAPSPPPIPTQAPPTPPADGKSPPSALVPALPPSSPPASPPSVPPPGRNQTAPHFPIA 183
               PS PP     P +PP    SPPS   P+LPPSS P                  P A
Sbjct: 136 TPSTPSSPPSTPSTPSSPP----SPPSPPSPSLPPSSLP------------------PSA 195

Query: 184 PTPTQNIPPSESPVPSPTTAAPPPS-GAAAKSTVS-GIMAVAIGVLAGIM 227
             PT   P SE+  P P    P  S  AA+K  +S GI+ V + ++  +M
Sbjct: 196 SPPTNGTPDSETLTPPPAPLPPSLSPNAASKGVMSYGIIGVTMILMYAVM 221

[Close]

BLAST of Lsi09G003550 vs. Swiss-Prot
Match: MAVI_CUCPE (Mavicyanin OS=Cucurbita pepo PE=1 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.0e-13
Identity = 40/101 (39.60%), Postives = 52/101 (51.49%), Query Frame = 1


Query: 11  TNYTVGDKSGWTTGV--DFSSWTIGKTFFVGDNL------GKHNVLDVDVSSFSQCATPK 70
           T + VGD +GWTT V  D++ W     F VGD+L        HNVL VD   F  C +  
Sbjct: 2   TVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSSS 61

Query: 71  DKQPMVTGNDVVPLTTPGIKWFICNIANHCNSGQKLVISVE 104
                 +G D +PL  PG  +F+C I  HC  GQK+ I V+
Sbjct: 62  PAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKVD 102

[Close]

BLAST of Lsi09G003550 vs. Swiss-Prot
Match: BCB2_ARATH (Uclacyanin-2 OS=Arabidopsis thaliana GN=At2g44790 PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.8e-10
Identity = 63/166 (37.95%), Postives = 82/166 (49.40%), Query Frame = 1


Query: 4   VPKVLAITNYTVGDKSGWTTGVDFSSWTIGKTFFVGDNL-----GKHNVLDVDVSSFSQC 63
           VP  +A+T YT+     WTTGVD+S W  GKTF VGD L       H V  VD + +  C
Sbjct: 24  VPGAVAVT-YTIE----WTTGVDYSGWATGKTFRVGDILEFKYGSSHTVDVVDKAGYDGC 83

Query: 64  ATPKDKQPMVTGNDVVPLTTPGIKWFICNIANHC--NSGQKLVISV--ETPPPPAGQAPP 123
                 +    G+  + L T GI +FIC+   HC  N G KL ++V   +  PP   A P
Sbjct: 84  DASSSTENHSDGDTKIDLKTVGINYFICSTPGHCRTNGGMKLAVNVVAGSAGPP---ATP 143

Query: 124 TPPTAGQAPSPPPIPTQAPPTPPADGKSPPSALVPALPPSSPPASP 161
           TPP+     S P  PT  P +PP+ G   P+   P    +SPP  P
Sbjct: 144 TPPS-----STPGTPT-TPESPPSGGSPTPTTPTPGAGSTSPPPPP 175

[Close]

BLAST of Lsi09G003550 vs. Swiss-Prot
Match: BCB1_ARATH (Blue copper protein OS=Arabidopsis thaliana GN=BCB PE=1 SV=2)

HSP 1 Score: 67.0 bits (162), Expect = 3.0e-10
Identity = 58/167 (34.73%), Postives = 79/167 (47.31%), Query Frame = 1


Query: 3   FVPKVLAITNYTVGDKSGWTTGVD---FSSWTIGKTFFVGDNL------GKHNVLDVDVS 62
           F   V+   +Y VGD + WT  +D   +++W  GKTF VGD L      G+H+V  V  +
Sbjct: 15  FAAVVVFAEDYDVGDDTEWTRPMDPEFYTTWATGKTFRVGDELEFDFAAGRHDVAVVSEA 74

Query: 63  SFSQCATPKDKQPMVTGNDVVPLTTPGIKWFICNIANHCNSGQKLVISVETPPPPAGQAP 122
           +F  C   K    M      + L T G ++FIC + +HC  GQKL I+V      AG   
Sbjct: 75  AFENCEKEKPISHMTVPPVKIMLNTTGPQYFICTVGDHCRFGQKLSITVVA----AGATG 134

Query: 123 PTPPTAGQAPSPPPIPTQAPPTPP-ADGKSPPSALVPALPPSSPPAS 160
              P AG  P+P   P+    TPP A G + PS       P+   AS
Sbjct: 135 GATPGAGATPAPGSTPSTGGTTPPTAGGTTTPSGSSGTTTPAGNAAS 177

[Close]

BLAST of Lsi09G003550 vs. Swiss-Prot
Match: BCP_PEA (Blue copper protein OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 8.8e-10
Identity = 52/148 (35.14%), Postives = 70/148 (47.30%), Query Frame = 1


Query: 11  TNYTVGDKSGWTTGVDFSSWTIGKTFFVGDNL------GKHNVLDVDVSSFSQCATPKDK 70
           T YTVGD SGW  G D+S+W   KTF VGD+L      G H V +V  S +  C +    
Sbjct: 25  TVYTVGDTSGWVIGGDYSTWASDKTFAVGDSLVFNYGAGAHTVDEVKESDYKSCTSGNSI 84

Query: 71  QPMVTGNDVVPLTTPGIKWFICNIANHCNSGQKLVISVETPPPPAGQAPPTPPTAGQ-AP 130
               TG   +PL   G  +FIC +  H   G KL I V+     +     TP ++G+ +P
Sbjct: 85  STDSTGATTIPLKKAGKHYFICGVPGHSTGGMKLSIKVKASSGSSAAPSATPSSSGKGSP 144

Query: 131 S--PPPIPTQAPPTPPADGKSPPSALVP 150
           S    P  T    TP    +S  ++L P
Sbjct: 145 SSDDTPAATTTTTTPTKQNESSATSLSP 172

[Close]

BLAST of Lsi09G003550 vs. TrEMBL
Match: A0A0A0KP33_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G157360 PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 7.1e-67
Identity = 159/237 (67.09%), Postives = 179/237 (75.53%), Query Frame = 1


Query: 1   TFFVPKVLAITNYTVGDKSGWTTGVDFSSWTIGKTFFVGDNL------GKHNVLDVDVSS 60
           TFFVP+VLA TNYTVGDKSGW  GVD+ SWT  KTFFVGDNL      GKHNVL+VDVSS
Sbjct: 39  TFFVPRVLAGTNYTVGDKSGWNLGVDYFSWTSDKTFFVGDNLVFKYEKGKHNVLNVDVSS 98

Query: 61  FSQCATPKDKQPMVTGNDVVPLTTPGIKWFICNIANHCNSGQKLVISVETPPPPAGQAPP 120
           FSQCA PKD+ P+V+GNDV+ LTTPG KWFIC+I +HCNSGQKLV+SV+T P   G+APP
Sbjct: 99  FSQCAAPKDQPPLVSGNDVITLTTPGTKWFICSIPHHCNSGQKLVLSVDTAPATPGEAPP 158

Query: 121 TPPTAGQAPSPPPIPTQAPPTPPADGKSPPSALVPALPPSSPPASPPSVPPPGRNQTAPH 180
            PP+A Q P  PP+    PP PP+   S    +VPA PPS PPASPPSV  PG+NQTAPH
Sbjct: 159 APPSAIQTPPVPPV--AVPPPPPS---SSVPVIVPAQPPSLPPASPPSVQSPGQNQTAPH 218

Query: 181 FPIAPTPTQNIPPSESP-VPSPTTAAPPPSGAAAKSTVS---GIMAVAIGVLAGIMI 228
            PIAP PTQNIPPS SP  PSPT  APPPS AA K  VS   G +A+A+ VLAGIMI
Sbjct: 219 LPIAPMPTQNIPPSVSPATPSPTPVAPPPS-AAVKFAVSGHLGFLAMAVSVLAGIMI 269

[Close]

BLAST of Lsi09G003550 vs. TrEMBL
Match: V7CZ56_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G236700g PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 3.7e-23
Identity = 59/133 (44.36%), Postives = 79/133 (59.40%), Query Frame = 1


Query: 1   TFFVPKVLAITNYTVGDKSGWTTGVDFSSWTIGKTFFVGDNL------GKHNVLDVDVSS 60
           T F+P +    ++ VGD  GWT G D+S+WT  KTF VGD L      G+HNV+ V+ ++
Sbjct: 14  TIFLPSIAVARDFVVGDDHGWTEGFDYSTWTADKTFQVGDVLVFKYVVGEHNVIKVNGTA 73

Query: 61  FSQCATPKDKQPMVTGNDVVPLTTPGIKWFICNIANHCNSGQKLVISVETPPPPAGQAPP 120
           F  C  P + + + TGND + L TPG KW+IC +  HCN+GQKL I+V        QA  
Sbjct: 74  FRSCTVPPESEVLTTGNDRIVLATPGRKWYICGVTGHCNAGQKLFITV--------QAQT 133

Query: 121 TPPTAGQAPSPPP 128
            PPT   AP+P P
Sbjct: 134 LPPTLPPAPAPSP 138

[Close]

BLAST of Lsi09G003550 vs. TrEMBL
Match: A0A067EIF6_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g042021mg PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.1e-22
Identity = 51/106 (48.11%), Postives = 65/106 (61.32%), Query Frame = 1


Query: 3   FVPKVLAITNYTVGDKSGWTTGVDFSSWTIGKTFFVGDNL------GKHNVLDVDVSSFS 62
           F     + T + VGD SGWT G D+ +W  GK F VGD L      G HNV  V+ ++F 
Sbjct: 16  FASTATSATKFIVGDDSGWTVGFDYQAWAKGKVFHVGDKLVFQYPVGAHNVFKVNGTAFQ 75

Query: 63  QCATPKDKQPMVTGNDVVPLTTPGIKWFICNIANHCNSGQKLVISV 103
            C  P  ++ + TGNDV+ L TPG KW+IC + NHCN GQKLVI+V
Sbjct: 76  NCQKPPLREALTTGNDVIVLATPGRKWYICGVRNHCNYGQKLVITV 121

[Close]

BLAST of Lsi09G003550 vs. TrEMBL
Match: W1NDI5_AMBTC (Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00004p00119890 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 4.1e-22
Identity = 62/137 (45.26%), Postives = 75/137 (54.74%), Query Frame = 1


Query: 3   FVPKVLAITNYTVGDKSGWTTGVDFSSWTIGKTFFVGDNL------GKHNVLDVDVSSFS 62
           F P ++  TNY VGD+ GWT GV +  W  GKTFFVGD +      G+HNV+ VD   F 
Sbjct: 13  FFPAIVLATNYIVGDEMGWTVGVSYEDWAEGKTFFVGDTITFNYHQGQHNVVKVDGKGFQ 72

Query: 63  QCATPKDKQPMVTGNDVVPLTTPGIKWFICNIANHCNSGQKLVISVETPPPPAGQAPPTP 122
            C    +   + TG D + L TPG KW+IC+   HC SGQKL I+V         AP   
Sbjct: 73  SCQEEPNNGILTTGADAITLATPGNKWYICSFGYHCESGQKLKITVYD-----SMAPIPT 132

Query: 123 PTAGQAPSPPPIPTQAP 134
           PT   AP P PIP  AP
Sbjct: 133 PTPPPAPMPWPIPEPAP 144

[Close]

BLAST of Lsi09G003550 vs. TrEMBL
Match: M5WYC6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa019588mg PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.2e-21
Identity = 62/134 (46.27%), Postives = 80/134 (59.70%), Query Frame = 1


Query: 3   FVPKVLAITNYTVGDKSGWTTGVDFSSWTIGKTFFVGDNL------GKHNVLDVDVSSFS 62
           F P VLA T+Y VGD  GWT   D+ +W  GK+F+VGDNL      G H VL V+ + F 
Sbjct: 16  FAPSVLA-TDYVVGDDKGWTINFDYQAWAQGKSFYVGDNLVFNYPEGAHTVLKVNGTGFQ 75

Query: 63  QCATPKDKQPMVTGNDVVPLTTPGIKWFICNIANHCNSG-QKLVISV-----ETPPPPAG 122
           QCA P D  P+ +G DV+ L TPG KW+IC +  HC  G QKL+I+V      + P P+ 
Sbjct: 76  QCAAPLDSAPLTSGKDVINLATPGRKWYICGVGQHCELGNQKLLITVLPSSSSSAPSPSH 135

Query: 123 QAPPTPPTAGQAPS 125
            + P+  TAG  PS
Sbjct: 136 SSWPS-ATAGPGPS 147

[Close]

BLAST of Lsi09G003550 vs. TAIR10
Match: AT3G60280.1 (AT3G60280.1 uclacyanin 3)

HSP 1 Score: 82.0 bits (201), Expect = 5.1e-16
Identity = 82/230 (35.65%), Postives = 109/230 (47.39%), Query Frame = 1


Query: 4   VPKVLAITNYTVGDKSGWTTGVDFSSWTIGKTFFVGDNLG-----KHNVLDVDVSSFSQC 63
           VP V A T + VGD SGWT+ +D++ W  GKTF VGD L       H+V  VD + +  C
Sbjct: 16  VPAVFAAT-FKVGDISGWTSNLDYTVWLTGKTFRVGDTLEFVYGLSHSVSVVDKAGYDNC 75

Query: 64  ATPKDKQPMVTGNDVVPLTTPGIKWFICNIANHCNSGQKLVISVETPPPPAGQAPPTPPT 123
            +    Q    G+  + LTT G   F+C    HC +G KL + V     P+   P +PP+
Sbjct: 76  DSSGATQNFADGDTKIDLTTVGTMHFLCPTFGHCKNGMKLAVPV-LAAAPSPSTPSSPPS 135

Query: 124 AGQAPSPPPIPTQAPPTPPADGKSPPSALVPALPPSSPPASPPSVPPPGRNQTAPHFPIA 183
               PS PP     P +PP    SPPS   P+LPPSS P                  P A
Sbjct: 136 TPSTPSSPPSTPSTPSSPP----SPPSPPSPSLPPSSLP------------------PSA 195

Query: 184 PTPTQNIPPSESPVPSPTTAAPPPS-GAAAKSTVS-GIMAVAIGVLAGIM 227
             PT   P SE+  P P    P  S  AA+K  +S GI+ V + ++  +M
Sbjct: 196 SPPTNGTPDSETLTPPPAPLPPSLSPNAASKGVMSYGIIGVTMILMYAVM 221

[Close]

BLAST of Lsi09G003550 vs. TAIR10
Match: AT3G17675.1 (AT3G17675.1 Cupredoxin superfamily protein)

HSP 1 Score: 78.6 bits (192), Expect = 5.6e-15
Identity = 36/98 (36.73%), Postives = 56/98 (57.14%), Query Frame = 1


Query: 11  TNYTVGDKSGWTTGVDFSSWTIGKTFFVGDNL------GKHNVLDVDVSSFSQCATPKDK 70
           T + VGD +GW    ++++WT G+ F VGD L       +HNV+ V+ ++++ C      
Sbjct: 7   TEHIVGDSNGWELFTNYTNWTQGREFHVGDVLVFNYKSDQHNVMQVNSTAYTDCGLDNYT 66

Query: 71  QPMVTGNDVVPLTTPGIKWFICNIANHCNSGQKLVISV 103
                GND + L+  G  WFIC + +HC +GQKL I+V
Sbjct: 67  TLFTKGNDSIILSEVGKLWFICGVDDHCVNGQKLSINV 104

[Close]

BLAST of Lsi09G003550 vs. TAIR10
Match: AT3G60270.1 (AT3G60270.1 Cupredoxin superfamily protein)

HSP 1 Score: 75.9 bits (185), Expect = 3.7e-14
Identity = 53/142 (37.32%), Postives = 72/142 (50.70%), Query Frame = 1


Query: 4   VPKVLAITNYTVGDKSGWTTGVDFSSWTIGKTFFVGDNL-----GKHNVLDVDVSSFSQC 63
           VP V A+T + VGD  GWT GV+++SW   KTF VGD L       H+V  V+ + +  C
Sbjct: 18  VPAVFAVT-FQVGDNDGWTIGVEYTSWVSEKTFRVGDTLEFKYGPSHSVAVVNKADYDGC 77

Query: 64  ATPKDKQPMVTGNDVVPLTTPGIKWFICNIANHCNSGQKLVI----SVETPPPPAGQAPP 123
            T +  Q    G+  + LT  G   F+C    HC+ G KL +    +V   PPP+  AP 
Sbjct: 78  ETSRPTQSFSDGDTKIDLTKVGAIHFLCLTPGHCSLGMKLAVQVLAAVSLEPPPSPSAPS 137

Query: 124 TPPTAGQAPSPPPIPTQAPPTP 137
             P+   APSP P      P+P
Sbjct: 138 PSPS---APSPSPSAPSPSPSP 155

[Close]

BLAST of Lsi09G003550 vs. TAIR10
Match: AT2G32300.1 (AT2G32300.1 uclacyanin 1)

HSP 1 Score: 73.2 bits (178), Expect = 2.4e-13
Identity = 78/230 (33.91%), Postives = 106/230 (46.09%), Query Frame = 1


Query: 11  TNYTVGDKSGWTTGVDFSSWTIGKTFFVGDNL------GKHNVLDVDVSSFSQCATPKDK 70
           T++T+G  SGWT G    +W  G+TF VGDNL        H+V++V    F  C   K  
Sbjct: 24  TDHTIGGPSGWTVGASLRTWAAGQTFAVGDNLVFSYPAAFHDVVEVTKPEFDSCQAVKPL 83

Query: 71  QPMVTGNDVVPLTTPGIKWFICNIANHCNSGQKLVISVETPPPPAGQAPPTPPTAGQAPS 130
                GN +VPLTTPG ++FIC +  HC+ G KL ++V     P     PT P     PS
Sbjct: 84  ITFANGNSLVPLTTPGKRYFICGMPGHCSQGMKLEVNV----VPTATVAPTAPLPNTVPS 143

Query: 131 -PPPIPTQAPPTPPADGKSPPSALVPA----LPPSS----PPASPPSVPPPGRNQTAPHF 190
              P P+   P  P    +P   L P+    LP SS    PP SP   P      + P F
Sbjct: 144 LNAPSPSSVLPIQPLLPLNPVPVLSPSSSTPLPSSSLPLIPPLSPALSPATAAGTSLPLF 203

Query: 191 PIAPTPTQNIPPSES--PVPSPTT----------AAPPPSGAAAKSTVSG 214
           P +P  + +   +++    PS TT          + P  S +AAK+ V G
Sbjct: 204 PGSPGSSSSTTSTKTVGTFPSSTTGTTADLAGADSPPADSSSAAKTLVLG 249

[Close]

BLAST of Lsi09G003550 vs. TAIR10
Match: AT2G44790.1 (AT2G44790.1 uclacyanin 2)

HSP 1 Score: 67.8 bits (164), Expect = 9.9e-12
Identity = 63/166 (37.95%), Postives = 82/166 (49.40%), Query Frame = 1


Query: 4   VPKVLAITNYTVGDKSGWTTGVDFSSWTIGKTFFVGDNL-----GKHNVLDVDVSSFSQC 63
           VP  +A+T YT+     WTTGVD+S W  GKTF VGD L       H V  VD + +  C
Sbjct: 24  VPGAVAVT-YTIE----WTTGVDYSGWATGKTFRVGDILEFKYGSSHTVDVVDKAGYDGC 83

Query: 64  ATPKDKQPMVTGNDVVPLTTPGIKWFICNIANHC--NSGQKLVISV--ETPPPPAGQAPP 123
                 +    G+  + L T GI +FIC+   HC  N G KL ++V   +  PP   A P
Sbjct: 84  DASSSTENHSDGDTKIDLKTVGINYFICSTPGHCRTNGGMKLAVNVVAGSAGPP---ATP 143

Query: 124 TPPTAGQAPSPPPIPTQAPPTPPADGKSPPSALVPALPPSSPPASP 161
           TPP+     S P  PT  P +PP+ G   P+   P    +SPP  P
Sbjct: 144 TPPS-----STPGTPT-TPESPPSGGSPTPTTPTPGAGSTSPPPPP 175

[Close]

BLAST of Lsi09G003550 vs. NCBI nr
Match: gi|778708262|ref|XP_011656154.1| (PREDICTED: uclacyanin-3-like [Cucumis sativus])

HSP 1 Score: 261.9 bits (668), Expect = 1.0e-66
Identity = 159/237 (67.09%), Postives = 179/237 (75.53%), Query Frame = 1


Query: 1   TFFVPKVLAITNYTVGDKSGWTTGVDFSSWTIGKTFFVGDNL------GKHNVLDVDVSS 60
           TFFVP+VLA TNYTVGDKSGW  GVD+ SWT  KTFFVGDNL      GKHNVL+VDVSS
Sbjct: 39  TFFVPRVLAGTNYTVGDKSGWNLGVDYFSWTSDKTFFVGDNLVFKYEKGKHNVLNVDVSS 98

Query: 61  FSQCATPKDKQPMVTGNDVVPLTTPGIKWFICNIANHCNSGQKLVISVETPPPPAGQAPP 120
           FSQCA PKD+ P+V+GNDV+ LTTPG KWFIC+I +HCNSGQKLV+SV+T P   G+APP
Sbjct: 99  FSQCAAPKDQPPLVSGNDVITLTTPGTKWFICSIPHHCNSGQKLVLSVDTAPATPGEAPP 158

Query: 121 TPPTAGQAPSPPPIPTQAPPTPPADGKSPPSALVPALPPSSPPASPPSVPPPGRNQTAPH 180
            PP+A Q P  PP+    PP PP+   S    +VPA PPS PPASPPSV  PG+NQTAPH
Sbjct: 159 APPSAIQTPPVPPV--AVPPPPPS---SSVPVIVPAQPPSLPPASPPSVQSPGQNQTAPH 218

Query: 181 FPIAPTPTQNIPPSESP-VPSPTTAAPPPSGAAAKSTVS---GIMAVAIGVLAGIMI 228
            PIAP PTQNIPPS SP  PSPT  APPPS AA K  VS   G +A+A+ VLAGIMI
Sbjct: 219 LPIAPMPTQNIPPSVSPATPSPTPVAPPPS-AAVKFAVSGHLGFLAMAVSVLAGIMI 269

[Close]

BLAST of Lsi09G003550 vs. NCBI nr
Match: gi|659074651|ref|XP_008437720.1| (PREDICTED: blue copper protein-like [Cucumis melo])

HSP 1 Score: 258.1 bits (658), Expect = 1.5e-65
Identity = 158/238 (66.39%), Postives = 173/238 (72.69%), Query Frame = 1


Query: 1   TFFVPKVLAITNYTVGDKSGWTTGVDFSSWTIGKTFFVGDNL------GKHNVLDVDVSS 60
           TFFVP+VLA TNYTVGDKSGW  GVD+ SWT  KTFFVGD+L      GKHNVL+VDVSS
Sbjct: 39  TFFVPQVLAATNYTVGDKSGWNLGVDYFSWTSDKTFFVGDSLVFKYEKGKHNVLNVDVSS 98

Query: 61  FSQCATPKDKQPMVTGNDVVPLTTPGIKWFICNIANHCNSGQKLVISVET-PPPPAGQAP 120
           FSQC  PKD+ PMV+GNDV+ LTTPG KWFIC I +HCNSGQKLVISV++ PP P  Q+P
Sbjct: 99  FSQCTAPKDQPPMVSGNDVITLTTPGTKWFICTIPHHCNSGQKLVISVDSAPPSPIIQSP 158

Query: 121 PTPPTAGQAPSPPPIPTQAPPTPPADGKSPPSALVPALPPSSPPASPPSVPPPGRNQTAP 180
             PP AGQ P         PPT      S P  LVP LPP  PP SPPSVP P +NQTAP
Sbjct: 159 LIPPFAGQPP---------PPT-----SSLPPVLVPDLPPVLPPTSPPSVPSPPQNQTAP 218

Query: 181 HFPIAPTPTQNIPPSESP-VPSPTTAAPPPSGAAAKSTVS---GIMAVAIGVLAGIMI 228
           H PIAP PTQ IPP ESP  PSP TAAPPPSGAA KS VS   G +A+A+ VLAGIMI
Sbjct: 219 HLPIAPMPTQTIPPVESPAAPSPITAAPPPSGAALKSVVSGHLGFLAMAVSVLAGIMI 262

[Close]

BLAST of Lsi09G003550 vs. NCBI nr
Match: gi|695024162|ref|XP_009399281.1| (PREDICTED: uclacyanin-3-like [Musa acuminata subsp. malaccensis])

HSP 1 Score: 119.4 bits (298), Expect = 8.2e-24
Identity = 90/214 (42.06%), Postives = 116/214 (54.21%), Query Frame = 1


Query: 4   VPKVLAITNYTVGDKSGWTTGVDFSSWTIGKTFFVGDNL------GKHNVLDVDVSSFSQ 63
           VP+    T++TVGD SGW    ++SSWT GK F VGDNL      G HNV+ V    F  
Sbjct: 20  VPQSAIATDFTVGDDSGWLPNFNYSSWTQGKEFRVGDNLVFKYMQGAHNVMQVGGPDFKV 79

Query: 64  CATPKDK-QPMVTGNDVVPLTTPGIKWFICNIANHCNSGQKLVISVETPPPPAGQAPPTP 123
           C T         +GND+V L TPG +W++C   +HC  GQKLV+++  P   +  +PP  
Sbjct: 80  CNTSAVAINTFTSGNDLVALDTPGRRWYMCGFGDHCTRGQKLVVNI-LPAAISPASPPAS 139

Query: 124 PTAGQAPSPPPIPTQAPPTPPADGKSPPSALVPALPPSSP------PASPPSVPPPGRNQ 183
           P +G A  PP  P  +P +PP    +PP A  PA PP+SP      PA+PP  PPP  + 
Sbjct: 140 PPSGPASPPPSPPPLSPASPPTSPPTPPFA--PASPPTSPPPSPSAPATPPPPPPPPLSP 199

Query: 184 TAPHF--PIAPTPTQNIPPSESPVPSPTTAAPPP 203
            +P    P  PTP     P  SP PSP+T A PP
Sbjct: 200 ASPPTSPPTPPTPVAPASPPTSPPPSPSTPATPP 230

[Close]

BLAST of Lsi09G003550 vs. NCBI nr
Match: gi|593800862|ref|XP_007163468.1| (hypothetical protein PHAVU_001G236700g [Phaseolus vulgaris])

HSP 1 Score: 116.7 bits (291), Expect = 5.3e-23
Identity = 59/133 (44.36%), Postives = 79/133 (59.40%), Query Frame = 1


Query: 1   TFFVPKVLAITNYTVGDKSGWTTGVDFSSWTIGKTFFVGDNL------GKHNVLDVDVSS 60
           T F+P +    ++ VGD  GWT G D+S+WT  KTF VGD L      G+HNV+ V+ ++
Sbjct: 14  TIFLPSIAVARDFVVGDDHGWTEGFDYSTWTADKTFQVGDVLVFKYVVGEHNVIKVNGTA 73

Query: 61  FSQCATPKDKQPMVTGNDVVPLTTPGIKWFICNIANHCNSGQKLVISVETPPPPAGQAPP 120
           F  C  P + + + TGND + L TPG KW+IC +  HCN+GQKL I+V        QA  
Sbjct: 74  FRSCTVPPESEVLTTGNDRIVLATPGRKWYICGVTGHCNAGQKLFITV--------QAQT 133

Query: 121 TPPTAGQAPSPPP 128
            PPT   AP+P P
Sbjct: 134 LPPTLPPAPAPSP 138

[Close]

BLAST of Lsi09G003550 vs. NCBI nr
Match: gi|1021548808|ref|XP_016165824.1| (PREDICTED: mavicyanin-like [Arachis ipaensis])

HSP 1 Score: 115.9 bits (289), Expect = 9.0e-23
Identity = 63/141 (44.68%), Postives = 79/141 (56.03%), Query Frame = 1


Query: 1   TFFVPKVLAITNYTVGDKSGWTTGVDFSSWTIGKTFFVGDNL------GKHNVLDVDVSS 60
           T F+P +   T + VGD  GW  G D++SW   K F VGD L      G+HNV  VD SS
Sbjct: 14  TIFLPSIAIATEFIVGDDQGWRPGFDYNSWAASKVFHVGDTLEFKYGVGEHNVYKVDGSS 73

Query: 61  FSQCATPKDKQPMVTGNDVVPLTTPGIKWFICNIANHCNSGQKLVISV----ETPPPPAG 120
           F  C  P +  PM +G+D + L T G KW+IC +A HC++GQKLVI+V       P PAG
Sbjct: 74  FQSCTVPTNSTPMTSGDDHILLATEGKKWYICGVAGHCSAGQKLVITVLPNLSPAPAPAG 133

Query: 121 ---QAPPTPPTAGQAPSPPPI 129
               AP  P   G  P+P PI
Sbjct: 134 PSLSAPSAPAPVGFVPAPAPI 154

The following BLAST results are available for this feature:

BLAST of Lsi09G003550 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BCB3_ARATH	9.0e-15	35.65	Uclacyanin-3 OS=Arabidopsis thaliana GN=UCC3 PE=2 SV=1	[more]
MAVI_CUCPE	1.0e-13	39.60	Mavicyanin OS=Cucurbita pepo PE=1 SV=1	[more]
BCB2_ARATH	1.8e-10	37.95	Uclacyanin-2 OS=Arabidopsis thaliana GN=At2g44790 PE=1 SV=1	[more]
BCB1_ARATH	3.0e-10	34.73	Blue copper protein OS=Arabidopsis thaliana GN=BCB PE=1 SV=2	[more]
BCP_PEA	8.8e-10	35.14	Blue copper protein OS=Pisum sativum PE=2 SV=1	[more]

BLAST of Lsi09G003550 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KP33_CUCSA	7.1e-67	67.09	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G157360 PE=4 SV=1	[more]
V7CZ56_PHAVU	3.7e-23	44.36	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G236700g PE=4 SV=1	[more]
A0A067EIF6_CITSI	1.1e-22	48.11	Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g042021mg PE=4 S...	[more]
W1NDI5_AMBTC	4.1e-22	45.26	Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00004p00119890 PE=4 SV=...	[more]
M5WYC6_PRUPE	1.2e-21	46.27	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa019588mg PE=4 SV=1	[more]

BLAST of Lsi09G003550 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G60280.1	5.1e-16	35.65	uclacyanin 3	[more]
AT3G17675.1	5.6e-15	36.73	Cupredoxin superfamily protein	[more]
AT3G60270.1	3.7e-14	37.32	Cupredoxin superfamily protein	[more]
AT2G32300.1	2.4e-13	33.91	uclacyanin 1	[more]
AT2G44790.1	9.9e-12	37.95	uclacyanin 2	[more]

BLAST of Lsi09G003550 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778708262\|ref\|XP_011656154.1\|	1.0e-66	67.09	PREDICTED: uclacyanin-3-like [Cucumis sativus]	[more]
gi\|659074651\|ref\|XP_008437720.1\|	1.5e-65	66.39	PREDICTED: blue copper protein-like [Cucumis melo]	[more]
gi\|695024162\|ref\|XP_009399281.1\|	8.2e-24	42.06	PREDICTED: uclacyanin-3-like [Musa acuminata subsp. malaccensis]	[more]
gi\|593800862\|ref\|XP_007163468.1\|	5.3e-23	44.36	hypothetical protein PHAVU_001G236700g [Phaseolus vulgaris]	[more]
gi\|1021548808\|ref\|XP_016165824.1\|	9.0e-23	44.68	PREDICTED: mavicyanin-like [Arachis ipaensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0009055	electron carrier activity

Vocabulary: **INTERPRO**
Term	Definition
IPR008972	Cupredoxin
IPR003245	Phytocyanin_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0031224	intrinsic component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0009055	electron carrier activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G003550.1	Lsi09G003550.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003245	Phytocyanin domain	PRODOM	PD003122		coord: 45..103 score: 2.
IPR003245	Phytocyanin domain	PFAM	PF02298	Cu_bind_like	coord: 21..96 score: 1.0
IPR003245	Phytocyanin domain	PROFILE	PS51485	PHYTOCYANIN	coord: 11..104 score: 3
IPR008972	Cupredoxin	GENE3D	G3DSA:2.60.40.420		coord: 11..108 score: 6.0
IPR008972	Cupredoxin	unknown	SSF49503	Cupredoxins	coord: 11..102 score: 1.05
None	No IPR available	PRINTS	PR01217	PRICHEXTENSN	coord: 129..145 score: 4.6E-9coord: 115..127 score: 4.6E-9coord: 149..161 score: 4.6E-9coord: 161..182 score: 4.
None	No IPR available	PANTHER	PTHR33021	FAMILY NOT NAMED	coord: 2..126 score: 1.2
None	No IPR available	PANTHER	PTHR33021:SF2	SUBFAMILY NOT NAMED	coord: 2..126 score: 1.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi09G003550	Bhi12G000328	Wax gourd	lsiwgoB010
Lsi09G003550	Cp4.1LG13g02070	Cucurbita pepo (Zucchini)	cpelsiB131

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi09G003550	Silver-seed gourd	carlsiB833
Lsi09G003550	Silver-seed gourd	carlsiB851
Lsi09G003550	Cucumber (Chinese Long) v3	cuclsiB171
Lsi09G003550	Cucumber (Chinese Long) v3	cuclsiB172
Lsi09G003550	Cucumber (Chinese Long) v3	cuclsiB345
Lsi09G003550	Watermelon (97103) v2	lsiwmbB007
Lsi09G003550	Watermelon (97103) v2	lsiwmbB010
Lsi09G003550	Bottle gourd (USVL1VR-Ls)	lsilsiB008
Lsi09G003550	Bottle gourd (USVL1VR-Ls)	lsilsiB019
Lsi09G003550	Cucumber (Gy14) v1	cgylsiB411
Lsi09G003550	Cucumber (Gy14) v1	cgylsiB487
Lsi09G003550	Cucumber (Gy14) v1	cgylsiB526
Lsi09G003550	Cucurbita maxima (Rimu)	cmalsiB267
Lsi09G003550	Cucurbita maxima (Rimu)	cmalsiB365
Lsi09G003550	Cucurbita maxima (Rimu)	cmalsiB530
Lsi09G003550	Cucurbita maxima (Rimu)	cmalsiB538
Lsi09G003550	Cucurbita maxima (Rimu)	cmalsiB742
Lsi09G003550	Cucurbita moschata (Rifu)	cmolsiB255
Lsi09G003550	Cucurbita moschata (Rifu)	cmolsiB353
Lsi09G003550	Cucurbita moschata (Rifu)	cmolsiB516
Lsi09G003550	Cucurbita moschata (Rifu)	cmolsiB523
Lsi09G003550	Cucurbita moschata (Rifu)	cmolsiB734
Lsi09G003550	Cucurbita pepo (Zucchini)	cpelsiB581
Lsi09G003550	Cucurbita pepo (Zucchini)	cpelsiB698
Lsi09G003550	Wild cucumber (PI 183967)	cpilsiB154
Lsi09G003550	Wild cucumber (PI 183967)	cpilsiB155
Lsi09G003550	Wild cucumber (PI 183967)	cpilsiB322
Lsi09G003550	Cucumber (Chinese Long) v2	culsiB156
Lsi09G003550	Cucumber (Chinese Long) v2	culsiB322
Lsi09G003550	Melon (DHL92) v3.5.1	lsimeB012
Lsi09G003550	Melon (DHL92) v3.5.1	lsimeB030
Lsi09G003550	Melon (DHL92) v3.5.1	lsimeB036
Lsi09G003550	Watermelon (Charleston Gray)	lsiwcgB007
Lsi09G003550	Watermelon (Charleston Gray)	lsiwcgB008
Lsi09G003550	Watermelon (Charleston Gray)	lsiwcgB023
Lsi09G003550	Watermelon (97103) v1	lsiwmB008
Lsi09G003550	Watermelon (97103) v1	lsiwmB024
Lsi09G003550	Watermelon (97103) v1	lsiwmB027
Lsi09G003550	Cucumber (Gy14) v2	cgyblsiB141
Lsi09G003550	Cucumber (Gy14) v2	cgyblsiB142
Lsi09G003550	Cucumber (Gy14) v2	cgyblsiB294
Lsi09G003550	Melon (DHL92) v3.6.1	lsimedB012
Lsi09G003550	Melon (DHL92) v3.6.1	lsimedB036
Lsi09G003550	Melon (DHL92) v3.6.1	lsimedB037