Lsi09G003380 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAGCACCGTGGCAAGTCATCTTTTCCTTCATCCTCTGCCATTTCAGCTCCACTTCAATAAAGAAGTCAGCGTAATCTGATTAAAAAATGACGCACTTTCTTCAACCCTCCATTTCTCTGCGGTCGTTGCGCAAAGGGTTTCAATTTTCATGTTCTTCCTCTTTTCTTCACTCTAATTCCATCGGATTAAGATCCTTCTCTTGCAAAATGTCGGCCGATTCTCCGATTCCAAGTGAATCCATCACCATCCCCTGCCAACTCGATCAACCTGTGCAGATTCTCGCTGCACCCGGTGTCTCTGATTCCGATTTCCGGCAAGTTCGATTTCCTTTCTAATCTTCTTTTCCTCAAAGAGAATACTAATTTTTATGCGGGCTCTATACAATTCTTGACGCCTTCTTAAGCCCCACATTCAAGATTTATTTTTGAATTTCCTCGATTTTTTTTTTCTTTTTTCAATGCATTATATTGCAGGAATGCTATCGATTCATCGTTGTTCAAACAGTGGCTGATGGACTTGCAAAGTGAGAGTGGGATTTTAGCCAAGGGAGCCATGTCCCTGAAGCGCGTTCTTATTCAGGTCGTGGAAAATGAACTCATCGAGTTTTACTATTGTTTCCATTTTTTCGTTCATAAGGTAATTAAGGAATTTTTGGTTCAGGGAGTTGATATGTTCGGAAACAAAATTGGGTTTCTCAAATTTAAAGCCGACATCTACGATAAGCAAACCGGGAAGAAGGTAATTGGACGATTACCATTTATTTGTTCTGTTGCTAAATTTGTTAAAGTCTGTTAATTGAGATTAGGATTAAATTAACTGAACTTTTTAGAAAATAATGATTACTTAGGAAGTGAATTTTAGTTATTTGTTGATCCTGAAATCACTTATGAATTATAATTGGATCACTTTTACCGCAATCACTTATTCAAAAATTGCTCTCAAATATGCTCTAGTCTTATGTTTTCCTTTATGTTATTCAGAATGAAGTCATATTAGTTGGTATTATGCCAAAAAAATCCATGAGGCACCAATGTAAACTTGGGGAACTGATCAATGCCGTGGTTTCTTTCTTTTCTACAAACTAAAACTTGTATAGGTTCCAGGTATTGTTTTTGCAAGAGGACCTGCTGTTGCTGTGCTTATCCTTTTGAGTTGCGAAGGAGAAACTTATGCTGTCCTGACCGAGCAGGTTGATCTTTATTTCATTGAATTTGTTATTACTTTCTGAAGTTCACCAGTTTTGTTGAGATTAAATCATTTGCCATGTAATTGGATGCTAATGACTGCCAGAATTTGCAACTTTTAGGTTGTTTATGCTGTGAAACACTACTTGAAAGTTGAATCTTGATCACAATTAATTGAAATTATATGTTTAAGGTTAGAGTTCCTGTTGGGAAGCTCATGTTGGAATTGCCTGCTGGTATGTTGGATGATGATAAAGGGGATTTTCTTGGCACAGCAGTTCGTGAGGTCTGATCTCTCTCTCTCTCTCTCTCTTTTAATCTCTCTCGATCTTATGATGTGATGCAACTTTATGTTATTGTAATGTGGAAAAAAGAAGTTCCCAAAGGTTATGCTGATATGTTAATATGTACTGTGATTTCATTATTTTTTTCTCTATGAAATCTTTGTTTTATCTTCTCTAGATAGATTTTTTTCCCCCTGTTAATTATTAAGTCATGACTTGATGCAAAGAGGTATATGTTGAGTTGAAGGAAATGTTGGTGAGGTTGATTCTATTTACAGACATGTACAAAAGAAAAATTTACCGTACAACAAAAGTATTACACAACATTTGAATGAAGAATCCAAGTTATGCAGGTCTTCATTAAAGAAAGAGTGGAAGGTTTTCTTTGACAATTTTGATGTGTTATCTGGTGTGGTAACCATGCAGGTTGAAGAAGAAATTGGCATTCAGTTAAAGCTTGAGGACATGGTCGATCTTACCAGCTTCTTGGACCCAGCTACTGGATGCAGAGTCTTTCCTTCTCCTGTAAGTTCACATTTTAGCAATTATGAATGGTTGAAAATTTGGCTGCAGATTCTAAAAGATCCATGACCGGTTAATCTGCCAAGTTTTTTTTAAGAGCCACTGTCTTTTGGAAATATAAGGCAGTCTGTTAAGAAGAACCATCTTATCTTAACCTTATAAGTTTGTCAAGTTTCCAGCTGAAGAGAATTGTATTAAGGAAATAAAGGCAGGCAATGCCGATTCCAACTACCAAGTTCCCACACCAGCCTACGAATCTCAATTGCACCTCACTCTCCCACCGATTATTACCAAAAAAGTTTCCTCTCTTCTTACAAACTCACTTGTGGCTTACCCTTTTTGCAACTTCTTGTGTACGTCTCAGCTCTTGGAGGCTTATCACAGTTCTAAAGAAATCATTACACGAAAGCCACATCCAACACAATAACATCTTAGTTTTAGGCATCATAGTTTCGCAGATTTCCCACTTGCACCTTGTTTTGTATATTAGCAAGGCTAAACATTATCTCACATGCTCATGGTTAGGGAGGATGTGATGAGGGAATCGGTCTCTTCTTGTATCGAGGATCTGCAAGTAAAGAGACAATAGCAGAGCTGCAAGGAAAGCAAACCGGACTGAGGGATCATGGCGAGCTGATTAAGGTTCATGTTGTTCCTTATGAAAAACTCTGGCGCATTACAGCAGATGCGAAGGCTCTAGTGGCCATTGCACTGTATGAAATGGCTCAGAAGGAAGGGCTTTTGCCTTCTTTGAAACCATGCTAGTGTCTTCTCTTCACCCTATATATGATCTTTCACCTTGAACTGAACCTTGGCAAATGTTTTCTTTCTTCAATTCATCTTTTGCTGGGTTATGTAAAAGGGAACAAGTTCCTTAACACACTGTCTCAAGACAAGAATATGTTGCACAATCAAAAAGCATACTCAAAGATCATCTCATTAGAGAAATTGCACAAGGAGAGTGAGGGAAGAGGGGACAATTTACCATATGAAACATGTATGTTTCGCTTAATCATTTAAAATCGTATATGTCAACAACTTTCTAGTGATTTGTAGAGTTTTCGAGGATATTTTTGTACGGGTGACCCATTTTGGAAGTCCAAATCAAAATCTGACCTAGTTCTTAAAAAGTATGTTTTTTTACCTTTTGTTTATGTCATATAAGTGTAAAATTATCAAAACCGAACATTGTGTACGCAGATTGAGATTTCTCTCTCTCGCTACTCTCGCTCCTTAGGGTTTAGGTTTTTTCATTCCTTGATCTCTCTATTTTCTCACTCTTGCTCTATAATTTCTTTAGTTTTTGCTCTTTTTATTAATAGAGAAAAAAAATAACGAGAGTAGTGAGAGTTACGAGTAAGGATCGAAAGCGAGGATGTATAGTAGCAAAAGTAAGGAACAGGAGTCAAGAGGAAGGAAAAGTGATGATGTATACTAGCGAGATTAATGAGTTATGGAGCAAGAGTAGCGAGAATGAGATCTTAACTCACATGCACAATAATGTTGTTTTGGTAATTTTCAATAATGTTGTTTTGGTAATTTTCATTGATGATGACGCAAGCAAGTGGTAAAAAACTTACGACAGATTCCATTTTGAACCCCAAAATGGGGCCAAATGTACAATTATCTCAGTCTTCAATGGGTGAGGCC CAGCACCGTGGCAAGTCATCTTTTCCTTCATCCTCTGCCATTTCAGCTCCACTTCAATAAAGAAGTCAGCGTAATCTGATTAAAAAATGACGCACTTTCTTCAACCCTCCATTTCTCTGCGGTCGTTGCGCAAAGGGTTTCAATTTTCATGTTCTTCCTCTTTTCTTCACTCTAATTCCATCGGATTAAGATCCTTCTCTTGCAAAATGTCGGCCGATTCTCCGATTCCAAGTGAATCCATCACCATCCCCTGCCAACTCGATCAACCTGTGCAGATTCTCGCTGCACCCGGTGTCTCTGATTCCGATTTCCGGAATGCTATCGATTCATCGTTGTTCAAACAGTGGCTGATGGACTTGCAAAGTGAGAGTGGGATTTTAGCCAAGGGAGCCATGTCCCTGAAGCGCGTTCTTATTCAGGGAGTTGATATGTTCGGAAACAAAATTGGGTTTCTCAAATTTAAAGCCGACATCTACGATAAGCAAACCGGGAAGAAGGTTCCAGGTATTGTTTTTGCAAGAGGACCTGCTGTTGCTGTGCTTATCCTTTTGAGTTGCGAAGGAGAAACTTATGCTGTCCTGACCGAGCAGGTTAGAGTTCCTGTTGGGAAGCTCATGTTGGAATTGCCTGCTGGTATGTTGGATGATGATAAAGGGGATTTTCTTGGCACAGCAGTTCGTGAGGAAATGTTGGTGAGGTTGATTCTATTTACAGACATGTACAAAAGAAAAATTTACCGTACAACAAAAGTTGAAGAAGAAATTGGCATTCAGTTAAAGCTTGAGGACATGGTCGATCTTACCAGCTTCTTGGACCCAGCTACTGGATGCAGAGTCTTTCCTTCTCCTGGAGGATGTGATGAGGGAATCGGTCTCTTCTTGTATCGAGGATCTGCAAGTAAAGAGACAATAGCAGAGCTGCAAGGAAAGCAAACCGGACTGAGGGATCATGGCGAGCTGATTAAGGTTCATGTTGTTCCTTATGAAAAACTCTGGCGCATTACAGCAGATGCGAAGGCTCTAGTGGCCATTGCACTGTATGAAATGGCTCAGAAGGAAGGGCTTTTGCCTTCTTTGAAACCATGCTAGTGTCTTCTCTTCACCCTATATATGATCTTTCACCTTGAACTGAACCTTGGCAAATGTTTTCTTTCTTCAATTCATCTTTTGCTGGGTTATGTAAAAGGGAACAAGTTCCTTAACACACTGTCTCAAGACAAGAATATGTTGCACAATCAAAAAGCATACTCAAAGATCATCTCATTAGAGAAATTGCACAAGGAGAGTGAGGGAAGAGGGGACAATTTACCATATGAAACATGTATGTTTCGCTTAATCATTTAAAATCGTATATGTCAACAACTTTCTAGTGATTTGTAGAGTTTTCGAGGATATTTTTGTACGGGTGACCCATTTTGGAAGTCCAAATCAAAATCTGACCTAGTTCTTAAAAAGTATGTTTTTTTACCTTTTGTTTATGTCATATAAGTGTAAAATTATCAAAACCGAACATTGTGTACGCAGATTGAGATTTCTCTCTCTCGCTACTCTCGCTCCTTAGGGTTTAGGTTTTTTCATTCCTTGATCTCTCTATTTTCTCACTCTTGCTCTATAATTTCTTTAGTTTTTGCTCTTTTTATTAATAGAGAAAAAAAATAACGAGAGTAGTGAGAGTTACGAGTAAGGATCGAAAGCGAGGATGTATAGTAGCAAAAGTAAGGAACAGGAGTCAAGAGGAAGGAAAAGTGATGATGTATACTAGCGAGATTAATGAGTTATGGAGCAAGAGTAGCGAGAATGAGATCTTAACTCACATGCACAATAATGTTGTTTTGGTAATTTTCAATAATGTTGTTTTGGTAATTTTCATTGATGATGACGCAAGCAAGTGGTAAAAAACTTACGACAGATTCCATTTTGAACCCCAAAATGGGGCCAAATGTACAATTATCTCAGTCTTCAATGGGTGAGGCC ATGACGCACTTTCTTCAACCCTCCATTTCTCTGCGGTCGTTGCGCAAAGGGTTTCAATTTTCATGTTCTTCCTCTTTTCTTCACTCTAATTCCATCGGATTAAGATCCTTCTCTTGCAAAATGTCGGCCGATTCTCCGATTCCAAGTGAATCCATCACCATCCCCTGCCAACTCGATCAACCTGTGCAGATTCTCGCTGCACCCGGTGTCTCTGATTCCGATTTCCGGAATGCTATCGATTCATCGTTGTTCAAACAGTGGCTGATGGACTTGCAAAGTGAGAGTGGGATTTTAGCCAAGGGAGCCATGTCCCTGAAGCGCGTTCTTATTCAGGGAGTTGATATGTTCGGAAACAAAATTGGGTTTCTCAAATTTAAAGCCGACATCTACGATAAGCAAACCGGGAAGAAGGTTCCAGGTATTGTTTTTGCAAGAGGACCTGCTGTTGCTGTGCTTATCCTTTTGAGTTGCGAAGGAGAAACTTATGCTGTCCTGACCGAGCAGGTTAGAGTTCCTGTTGGGAAGCTCATGTTGGAATTGCCTGCTGGTATGTTGGATGATGATAAAGGGGATTTTCTTGGCACAGCAGTTCGTGAGGAAATGTTGGTGAGGTTGATTCTATTTACAGACATGTACAAAAGAAAAATTTACCGTACAACAAAAGTTGAAGAAGAAATTGGCATTCAGTTAAAGCTTGAGGACATGGTCGATCTTACCAGCTTCTTGGACCCAGCTACTGGATGCAGAGTCTTTCCTTCTCCTGGAGGATGTGATGAGGGAATCGGTCTCTTCTTGTATCGAGGATCTGCAAGTAAAGAGACAATAGCAGAGCTGCAAGGAAAGCAAACCGGACTGAGGGATCATGGCGAGCTGATTAAGGTTCATGTTGTTCCTTATGAAAAACTCTGGCGCATTACAGCAGATGCGAAGGCTCTAGTGGCCATTGCACTGTATGAAATGGCTCAGAAGGAAGGGCTTTTGCCTTCTTTGAAACCATGCTAG MTHFLQPSISLRSLRKGFQFSCSSSFLHSNSIGLRSFSCKMSADSPIPSESITIPCQLDQPVQILAAPGVSDSDFRNAIDSSLFKQWLMDLQSESGILAKGAMSLKRVLIQGVDMFGNKIGFLKFKADIYDKQTGKKVPGIVFARGPAVAVLILLSCEGETYAVLTEQVRVPVGKLMLELPAGMLDDDKGDFLGTAVREEMLVRLILFTDMYKRKIYRTTKVEEEIGIQLKLEDMVDLTSFLDPATGCRVFPSPGGCDEGIGLFLYRGSASKETIAELQGKQTGLRDHGELIKVHVVPYEKLWRITADAKALVAIALYEMAQKEGLLPSLKPC
BLAST of Lsi09G003380 vs. Swiss-Prot
Match: NUD14_ARATH (Nudix hydrolase 14, chloroplastic OS=Arabidopsis thaliana GN=NUDT14 PE=1 SV=2) HSP 1 Score: 397.5 bits (1020), Expect = 1.4e-109 Identity = 200/296 (67.57%), Postives = 239/296 (80.74%), Query Frame = 1
BLAST of Lsi09G003380 vs. TrEMBL
Match: A0A0A0KR12_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G157250 PE=4 SV=1) HSP 1 Score: 531.6 bits (1368), Expect = 7.0e-148 Identity = 277/332 (83.43%), Postives = 289/332 (87.05%), Query Frame = 1
BLAST of Lsi09G003380 vs. TrEMBL
Match: A0A068UQG7_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00030322001 PE=4 SV=1) HSP 1 Score: 422.5 bits (1085), Expect = 4.6e-115 Identity = 216/309 (69.90%), Postives = 250/309 (80.91%), Query Frame = 1
BLAST of Lsi09G003380 vs. TrEMBL
Match: M5WMS9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009118mg PE=4 SV=1) HSP 1 Score: 419.1 bits (1076), Expect = 5.1e-114 Identity = 221/333 (66.37%), Postives = 260/333 (78.08%), Query Frame = 1
BLAST of Lsi09G003380 vs. TrEMBL
Match: B9RBX0_RICCO (ADP-ribose pyrophosphatase, putative OS=Ricinus communis GN=RCOM_1682170 PE=4 SV=1) HSP 1 Score: 417.5 bits (1072), Expect = 1.5e-113 Identity = 217/307 (70.68%), Postives = 245/307 (79.80%), Query Frame = 1
BLAST of Lsi09G003380 vs. TrEMBL
Match: A0A067JNK0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20717 PE=4 SV=1) HSP 1 Score: 414.8 bits (1065), Expect = 9.6e-113 Identity = 221/321 (68.85%), Postives = 250/321 (77.88%), Query Frame = 1
BLAST of Lsi09G003380 vs. TAIR10
Match: AT4G11980.1 (AT4G11980.1 nudix hydrolase homolog 14) HSP 1 Score: 397.5 bits (1020), Expect = 8.0e-111 Identity = 200/296 (67.57%), Postives = 239/296 (80.74%), Query Frame = 1
BLAST of Lsi09G003380 vs. NCBI nr
Match: gi|659073654|ref|XP_008437180.1| (PREDICTED: nudix hydrolase 14, chloroplastic [Cucumis melo]) HSP 1 Score: 557.0 bits (1434), Expect = 2.2e-155 Identity = 286/332 (86.14%), Postives = 298/332 (89.76%), Query Frame = 1
BLAST of Lsi09G003380 vs. NCBI nr
Match: gi|449459650|ref|XP_004147559.1| (PREDICTED: nudix hydrolase 14, chloroplastic isoform X1 [Cucumis sativus]) HSP 1 Score: 531.6 bits (1368), Expect = 1.0e-147 Identity = 277/332 (83.43%), Postives = 289/332 (87.05%), Query Frame = 1
BLAST of Lsi09G003380 vs. NCBI nr
Match: gi|1000984120|ref|XP_015572130.1| (PREDICTED: nudix hydrolase 14, chloroplastic [Ricinus communis]) HSP 1 Score: 422.9 bits (1086), Expect = 5.1e-115 Identity = 217/304 (71.38%), Postives = 245/304 (80.59%), Query Frame = 1
BLAST of Lsi09G003380 vs. NCBI nr
Match: gi|661886484|emb|CDP09848.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 422.5 bits (1085), Expect = 6.6e-115 Identity = 216/309 (69.90%), Postives = 250/309 (80.91%), Query Frame = 1
BLAST of Lsi09G003380 vs. NCBI nr
Match: gi|595847745|ref|XP_007209389.1| (hypothetical protein PRUPE_ppa009118mg [Prunus persica]) HSP 1 Score: 419.1 bits (1076), Expect = 7.3e-114 Identity = 221/333 (66.37%), Postives = 260/333 (78.08%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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