Lsi09G003130 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGTAATTTCACAAACCTCTTCCTCTTTCTTTCTTCCTTCCTTCCAGTTGCAGGCACAGCTTTAGAGGAGAAAGCGAGGCCCACCCACAAGTGTCTCGCAATCGTTTCTACTTGTGGTTTAAGCTTCTCTGTTTCTTCTTCTCTTCATTTCAACGTTTTCTTTTTCAAAACTCTCTCTACAGACTTGCACAGAAGAAAAAAAGGATTAAAAAGTCCCTTTGATTCTCTCTCTGTTCCGATTCCTTTCTTCCCAATGTAACTGGTACCCCTTTTTTCCAATTAAACAAATACTACCAGCGAATTAAAGTTGGGTTTGGTTTTTGTTTATTGGGATTTCTGTTTGGATTTTCTTTGTTTTGAGACGTTGACGATTGTGGAAGATGAAAAACGAGGATCAAACGAGGTCCCTGTTTGGGATTTCGCTCACTGATCGACCTAAATGGCAGCAGTTTCTCATTTGCACTTCTGGGTTTTTCTTTGGCTACCTTGTTAATGGTGTTTGTGAGGTTTGTTTCTTTCAATCTCTTTTGGGGTTTCTTTGTTTTGAATCTTTTTGATGATGGGTGTTACTCGGAACGATTCTGATTGATGTTAATGGCTCGTCTCTTAGTTTTATTTGTGTGGTGATTATTCCTGCATGTGTTTGTGTAACTATTTGGTAGCTGAGAAAACGCAAGAGAATTTTCGGAACATGGTAGCGAAAGATAAATTCCTGTATAAAGCAGTAAACGTTCTACTTTATTGTACAATAACTAAGAACGTTTACAATTCTTATTCTAGTCCCTCTTAGTAATGGCTTTTCAAAAGTTAATCCCCTAGACTAAATAGCCATGATTTTCTGTGTTAGCATCGGTTAGTTTAATGTTAATGATTTGGTCAACTTTCTATTGCCAAATTTTATTTGATATTGACACAACATGTTCTTGGTTCGCAGGAATATGTGTATAATCGTCTTAAATTCAGGTATTTGATCTATCTTTTTAGTTTGTGTCGAGTTTGTGTTCGAACTATTCCATCTCTATGGAACTGTGTTTTTATGCTAAATCCCTTTTCTTAACAAATTTTAGTTCTGCAGTTATGGATGGTACTTCACATTTGTGCAAGGATTTGTTTATCTGGCACTTATTTATCTCCAAGGTTTCACCACCAAGCAAATGGTCAACCCATGGAAGACATATGTAAAGCTCTCAGCTGTTCTTATGGGATCTCATGGATTAACCAAGGGCTCCTTGGCTTTTCTGAACTATCCAGCGCAAATTATGTTCAAATCTACCAAGGCATGTTTTCTGATCAGTAACTGTTGAGATTTTCGATTATATGTATAGATATTACCTCTTGATCTGTCTTTGAATCGAGTTCCGGTAGCTTAATTTTGTGATTTTAGATTGACCCTTTTTTTATGTAAATCTTCAGGTGCTTCCTGTTATGATAATGGGAGCCTTCATTCCTGGCTTGAGAAGGAAATACCCTATTCATGAGTATATCTCTGCTCTCCTTTTAGTGATTGGATTGATCCTCTTCACCTTAGCAGATGCACAGACTTCTCCAAATTTTAGTATATTAGGTGTTGTTATGATAAGTGGTGCTCTTGTCATGGACGCCTTTCTCGGAAATTTGCAGGAAGCCATTTTTACTATGAATCCTGATACTACACAGGTAAGCTTTGATCCCCTTCAGTTTTACCCGTTCTGAAATATGCAACAGTGAAGAATATACTTCAGATTATCATTCTGTTATTTCAATTCTTGATATAACCTTTTGATACTCTCTTTGGCAGACCGAAATGTTATTTTGCTCGACCGTAGTTGGCCTCCCATTCTTAGTAGTACCGATGGTGTTAACGGGAGAGCTGTTTCGTGCCTGGACTTCCTGTGCTGAAGTAAATAACTTAATCCAACTCTGATAATTAGCTCCTCTTTATTGCTAGCCTATACTTGTTTTTCTTGTCATTATAAAGAAATCCTTGTCTACAACTTGATGGCAAGTCATGTAGTGGTTAATGTCTGCCTCCATGTTTCTTCTCTCCCTATAAGTCAACTGTTTATATAGTCAACACATCCATTTGATTAGTTCAATATGTGCTAAGAAAATGTCCTGCCTGCAACTTAGTCAACATATGCCCTTTGTTCTATTATAAAACTGGACATTATACTTTCTTAATTTACAATATTATCACTATCATTGAAGAGAAGGTCAACAAAAACAGGATTGCAGAATATTACTCTTGACTTGGCTGTTTAGTTATGATTATACAGCTCATATCTTGACTTTGTACTAAATGTATCACAGCACCCGTATGTCTATGGAGTCTTGGTGTTCGAAGCCATGGCGACATTTGTTGGGCAAGTGTCTGTTCTTTCCCTCATTGCCATTTTCGGCGCTGCCACAACCGCAATGGTATGTTCTTCTTCAAATTCTATCCTTTAGTTCAAGCGAATGATTTTGGGTTTTACCGTTTACCAACCGGGTTTCGGTCTTTACTGATGTGTGCAGATAACAACTGCAAGAAAAGCAGTCACTCTTCTGCTTTCATACCTGATATTTACCAAGCCAATGACAGAACAACATGGAAGTGGGCTGCTTCTTATAGCCATGGGAATTGTACTGAAGATGTTGCCTGACAACAAATTGCCTTCAAGAGCAGCAAAATCATCACATAGAATAGAAGAGAATCAGTTAGACAAGGGAAAAGAAGATGAAGAGAAGAGGCCATTAGTTTAATTATATATCCTTTAATGGAGAGTTCATGTAGTGTGTCTATCAATTAAGAGTTTTCCTAGTTTTTTTTTTTTTTTTTTTTT CGTAATTTCACAAACCTCTTCCTCTTTCTTTCTTCCTTCCTTCCAGTTGCAGGCACAGCTTTAGAGGAGAAAGCGAGGCCCACCCACAAGTGTCTCGCAATCGTTTCTACTTGTGGTTTAAGCTTCTCTGTTTCTTCTTCTCTTCATTTCAACGTTTTCTTTTTCAAAACTCTCTCTACAGACTTGCACAGAAGAAAAAAAGGATTAAAAAGTCCCTTTGATTCTCTCTCTGTTCCGATTCCTTTCTTCCCAATGTAACTGGTACCCCTTTTTTCCAATTAAACAAATACTACCAGCGAATTAAAGTTGGGTTTGGTTTTTGTTTATTGGGATTTCTGTTTGGATTTTCTTTGTTTTGAGACGTTGACGATTGTGGAAGATGAAAAACGAGGATCAAACGAGGTCCCTGTTTGGGATTTCGCTCACTGATCGACCTAAATGGCAGCAGTTTCTCATTTGCACTTCTGGGTTTTTCTTTGGCTACCTTGTTAATGGTGTTTGTGAGGTGCTTCCTGTTATGATAATGGGAGCCTTCATTCCTGGCTTGAGAAGGAAATACCCTATTCATGAGTATATCTCTGCTCTCCTTTTAGTGATTGGATTGATCCTCTTCACCTTAGCAGATGCACAGACTTCTCCAAATTTTAGTATATTAGGTGTTGTTATGATAAGTGGTGCTCTTGTCATGGACGCCTTTCTCGGAAATTTGCAGGAAGCCATTTTTACTATGAATCCTGATACTACACAGACCGAAATGTTATTTTGCTCGACCGTAGTTGGCCTCCCATTCTTAGTAGTACCGATGGTGTTAACGGGAGAGCTGTTTCGTGCCTGGACTTCCTGTGCTGAACACCCGTATGTCTATGGAGTCTTGGTGTTCGAAGCCATGGCGACATTTGTTGGGCAAGTGTCTGTTCTTTCCCTCATTGCCATTTTCGGCGCTGCCACAACCGCAATGATAACAACTGCAAGAAAAGCAGTCACTCTTCTGCTTTCATACCTGATATTTACCAAGCCAATGACAGAACAACATGGAAGTGGGCTGCTTCTTATAGCCATGGGAATTGTACTGAAGATGTTGCCTGACAACAAATTGCCTTCAAGAGCAGCAAAATCATCACATAGAATAGAAGAGAATCAGTTAGACAAGGGAAAAGAAGATGAAGAGAAGAGGCCATTAGTTTAATTATATATCCTTTAATGGAGAGTTCATGTAGTGTGTCTATCAATTAAGAGTTTTCCTAGTTTTTTTTTTTTTTTTTTTTT ATGAAAAACGAGGATCAAACGAGGTCCCTGTTTGGGATTTCGCTCACTGATCGACCTAAATGGCAGCAGTTTCTCATTTGCACTTCTGGGTTTTTCTTTGGCTACCTTGTTAATGGTGTTTGTGAGGTGCTTCCTGTTATGATAATGGGAGCCTTCATTCCTGGCTTGAGAAGGAAATACCCTATTCATGAGTATATCTCTGCTCTCCTTTTAGTGATTGGATTGATCCTCTTCACCTTAGCAGATGCACAGACTTCTCCAAATTTTAGTATATTAGGTGTTGTTATGATAAGTGGTGCTCTTGTCATGGACGCCTTTCTCGGAAATTTGCAGGAAGCCATTTTTACTATGAATCCTGATACTACACAGACCGAAATGTTATTTTGCTCGACCGTAGTTGGCCTCCCATTCTTAGTAGTACCGATGGTGTTAACGGGAGAGCTGTTTCGTGCCTGGACTTCCTGTGCTGAACACCCGTATGTCTATGGAGTCTTGGTGTTCGAAGCCATGGCGACATTTGTTGGGCAAGTGTCTGTTCTTTCCCTCATTGCCATTTTCGGCGCTGCCACAACCGCAATGATAACAACTGCAAGAAAAGCAGTCACTCTTCTGCTTTCATACCTGATATTTACCAAGCCAATGACAGAACAACATGGAAGTGGGCTGCTTCTTATAGCCATGGGAATTGTACTGAAGATGTTGCCTGACAACAAATTGCCTTCAAGAGCAGCAAAATCATCACATAGAATAGAAGAGAATCAGTTAGACAAGGGAAAAGAAGATGAAGAGAAGAGGCCATTAGTTTAA MKNEDQTRSLFGISLTDRPKWQQFLICTSGFFFGYLVNGVCEVLPVMIMGAFIPGLRRKYPIHEYISALLLVIGLILFTLADAQTSPNFSILGVVMISGALVMDAFLGNLQEAIFTMNPDTTQTEMLFCSTVVGLPFLVVPMVLTGELFRAWTSCAEHPYVYGVLVFEAMATFVGQVSVLSLIAIFGAATTAMITTARKAVTLLLSYLIFTKPMTEQHGSGLLLIAMGIVLKMLPDNKLPSRAAKSSHRIEENQLDKGKEDEEKRPLV
BLAST of Lsi09G003130 vs. Swiss-Prot
Match: UTR4_ARATH (UDP-galactose/UDP-glucose transporter 4 OS=Arabidopsis thaliana GN=UTR4 PE=2 SV=1) HSP 1 Score: 350.5 bits (898), Expect = 1.6e-95 Identity = 183/230 (79.57%), Postives = 209/230 (90.87%), Query Frame = 1
BLAST of Lsi09G003130 vs. Swiss-Prot
Match: UTR2_ARATH (UDP-galactose/UDP-glucose transporter 2 OS=Arabidopsis thaliana GN=UTR2 PE=2 SV=1) HSP 1 Score: 347.8 bits (891), Expect = 1.0e-94 Identity = 184/229 (80.35%), Postives = 211/229 (92.14%), Query Frame = 1
BLAST of Lsi09G003130 vs. Swiss-Prot
Match: S35B3_HUMAN (Adenosine 3'-phospho 5'-phosphosulfate transporter 2 OS=Homo sapiens GN=SLC35B3 PE=1 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 1.3e-28 Identity = 79/206 (38.35%), Postives = 127/206 (61.65%), Query Frame = 1
BLAST of Lsi09G003130 vs. Swiss-Prot
Match: S35B3_PONAB (Adenosine 3'-phospho 5'-phosphosulfate transporter 2 OS=Pongo abelii GN=SLC35B3 PE=2 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 1.1e-27 Identity = 78/206 (37.86%), Postives = 126/206 (61.17%), Query Frame = 1
BLAST of Lsi09G003130 vs. Swiss-Prot
Match: S35B3_DROME (Adenosine 3'-phospho 5'-phosphosulfate transporter 2 OS=Drosophila melanogaster GN=Papst2 PE=1 SV=2) HSP 1 Score: 124.4 bits (311), Expect = 1.9e-27 Identity = 76/196 (38.78%), Postives = 122/196 (62.24%), Query Frame = 1
BLAST of Lsi09G003130 vs. TrEMBL
Match: A0A0A0KKM8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G155590 PE=4 SV=1) HSP 1 Score: 412.1 bits (1058), Expect = 5.0e-112 Identity = 219/228 (96.05%), Postives = 224/228 (98.25%), Query Frame = 1
BLAST of Lsi09G003130 vs. TrEMBL
Match: A0A059CGU3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D01926 PE=4 SV=1) HSP 1 Score: 362.8 bits (930), Expect = 3.5e-97 Identity = 187/236 (79.24%), Postives = 211/236 (89.41%), Query Frame = 1
BLAST of Lsi09G003130 vs. TrEMBL
Match: U5GP07_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s08690g PE=4 SV=1) HSP 1 Score: 360.5 bits (924), Expect = 1.7e-96 Identity = 192/234 (82.05%), Postives = 215/234 (91.88%), Query Frame = 1
BLAST of Lsi09G003130 vs. TrEMBL
Match: G7L2H4_MEDTR (UDP-galactose transporter 1 OS=Medicago truncatula GN=MTR_7g076310 PE=4 SV=1) HSP 1 Score: 359.0 bits (920), Expect = 5.0e-96 Identity = 191/242 (78.93%), Postives = 213/242 (88.02%), Query Frame = 1
BLAST of Lsi09G003130 vs. TrEMBL
Match: A2Q3P6_MEDTR (Solute carrier family 35 member B3, related OS=Medicago truncatula GN=MTR_7g076310 PE=4 SV=1) HSP 1 Score: 359.0 bits (920), Expect = 5.0e-96 Identity = 191/242 (78.93%), Postives = 213/242 (88.02%), Query Frame = 1
BLAST of Lsi09G003130 vs. TAIR10
Match: AT1G12600.1 (AT1G12600.1 UDP-N-acetylglucosamine (UAA) transporter family) HSP 1 Score: 350.5 bits (898), Expect = 9.1e-97 Identity = 183/230 (79.57%), Postives = 209/230 (90.87%), Query Frame = 1
BLAST of Lsi09G003130 vs. TAIR10
Match: AT4G23010.3 (AT4G23010.3 UDP-galactose transporter 2) HSP 1 Score: 278.9 bits (712), Expect = 3.4e-75 Identity = 170/276 (61.59%), Postives = 199/276 (72.10%), Query Frame = 1
BLAST of Lsi09G003130 vs. TAIR10
Match: AT1G14360.1 (AT1G14360.1 UDP-galactose transporter 3) HSP 1 Score: 55.5 bits (132), Expect = 6.0e-08 Identity = 49/197 (24.87%), Postives = 93/197 (47.21%), Query Frame = 1
BLAST of Lsi09G003130 vs. TAIR10
Match: AT2G02810.1 (AT2G02810.1 UDP-galactose transporter 1) HSP 1 Score: 55.1 bits (131), Expect = 7.9e-08 Identity = 52/217 (23.96%), Postives = 100/217 (46.08%), Query Frame = 1
BLAST of Lsi09G003130 vs. NCBI nr
Match: gi|659073704|ref|XP_008437207.1| (PREDICTED: UDP-galactose/UDP-glucose transporter 2 [Cucumis melo]) HSP 1 Score: 413.7 bits (1062), Expect = 2.5e-112 Identity = 220/228 (96.49%), Postives = 224/228 (98.25%), Query Frame = 1
BLAST of Lsi09G003130 vs. NCBI nr
Match: gi|700194971|gb|KGN50148.1| (hypothetical protein Csa_5G155590 [Cucumis sativus]) HSP 1 Score: 412.1 bits (1058), Expect = 7.2e-112 Identity = 219/228 (96.05%), Postives = 224/228 (98.25%), Query Frame = 1
BLAST of Lsi09G003130 vs. NCBI nr
Match: gi|702324607|ref|XP_010053337.1| (PREDICTED: UDP-galactose/UDP-glucose transporter 2-like [Eucalyptus grandis]) HSP 1 Score: 362.8 bits (930), Expect = 5.0e-97 Identity = 187/236 (79.24%), Postives = 211/236 (89.41%), Query Frame = 1
BLAST of Lsi09G003130 vs. NCBI nr
Match: gi|729322084|ref|XP_010533718.1| (PREDICTED: UDP-galactose/UDP-glucose transporter 4 [Tarenaya hassleriana]) HSP 1 Score: 362.1 bits (928), Expect = 8.5e-97 Identity = 192/239 (80.33%), Postives = 213/239 (89.12%), Query Frame = 1
BLAST of Lsi09G003130 vs. NCBI nr
Match: gi|743852138|ref|XP_011029174.1| (PREDICTED: UDP-galactose/UDP-glucose transporter 2 [Populus euphratica]) HSP 1 Score: 360.5 bits (924), Expect = 2.5e-96 Identity = 192/234 (82.05%), Postives = 215/234 (91.88%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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