Lsi09G002900 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGAGGGGATTCAAAGCATCTCAACAAATGACACCACACGACGGGGTCTAATTTCTCGGCTTTTATGGCGGAGCATTGTCCGGCCCGGTTCATCTCGCCGGATCCTTTCGACATCCTCACTCTCTCTATATATATATGTATATTTCAACAAATAATTCTCTTACAAAATCCCAATTCATCTGAAAGGATCGAGATCCAAGGAGAGTGGGGAACACAAATTCGGATCTCTTCTTTTCGACCTTGATTCCATCCCCTTTTTCATCATCTACAAAAATGCCCGCCGGAACTCTTGAAGTTCTTCTTGTTTCCGCCAAGGGCCTTGAAAACACCGATTACCTCTGTAAGTTCCCGCTCCCGATCAAGATCTTTTTCAATTTCCCTCTGTTTTCCTGTTTCTGTTTCGCGATCTCTTATATGGGTGTTTGTCAAATATGTTATTTATTCTGATTTTGATTTGATATTATGATTCTGATTATCTGTTGGTTGGTATCTGAGAAAGTGATGGTTGAAATGAAACTCATAGACCAAAAGGCTTATTATATTGATATTTGATATATGGGGTTTATATCAGCCATGAATCAAATTGATCTGCATGTGAAGTGTTTGAGGAAATGTTTATAGAGGGTCACGTTTGTAAATAATGACAAAACAGGAGTCGTTTTATGGGAATTCGTATTGGGTACTGGTTTCTTGTGTAGTACTTTTAATGTTGAGGTGGATATTCTTGCATATTTGGATCCTAAACTGATCTTATTCTTCTAGTTTTGTGTAAAAGGAGAACTCTATTGACAGATCTTTGTGATGTTTTTATTTGCCAAAAAAAAAAAAAAACTTTTTGCCCTGTTTTTAGAATTTATGAACTAATTATGATTTGGGAAATTCATTTGGCAATAAGATTGGGGAAAAAAAAGTTTAAATATCTTTTTAGTTAGTGCCACATCAAAATCAAAATAGCTCAATGGTTGAAGTGTCTATTTCTTTTGAAGTTAGAGGTTAAAATCAACTCACATTTGTTGTATTAAAAGATCTTTTAAGCTAGTATTTTTTTTCCTTTAAAAAAATAAATAATAAAAGAAATTAAGAAATATGAAATGGGTTTCATATATATATTGGGAAAAGTCTTTAGAAAATGTACATAGAAAGCCTTCACAATTCATCTAATATTTCAAAGGTGCAAGTGGGTGGTATGCATGTGCTAATACACATTTCAGCTTATCTTTTTTAGTTCTATGATGTAATCACCTTTTGGTGTTTCAGGTTTTTTCCTGCATATCAATGAAATTGTTTTTTATACCAAAAAATATATATTTGGAAGGGATGGATTGTATTTCCATTATTTCTCATCCTTTAACTCTCTTACACGTTCATAATGTCCCAAATCAAAATATATAGATTATATATTTTTGTTAAATTTAAAGGTAGTCTTGTATTAAAAAGGTATTCACCTTCCTTTTACCCTCGTACTCATTCATAATGCCACTACTTTGTTTCCCAAATATAAAATATGGTTCTTTTATTTTTCTTCTAATTTTAAGGTAGTCTTTGTATTAACGAGGTTTTCGTGGATTTGAGCAGGTAACATGGATCCTTATGTTACTCTTACTTGCCGCACACAGGAGCAGAAAAGCAGTGTTGCATCAGGTTGGTTTGTCTTCTACATAATCCTCAAATCCCCATTGTCTCACTTTCAAGTGTTTTTACCCTCAGAAAGGATGTTTCTTGATTGCATACAGGAAAGGGATCTGACCCCGAATGGAATGAGACTTTTGTATTCACCATATCTGAGGGTGCAGAAGACCTCATCCTAAAGATATTGGACAGTGACAGTGGCACTCAAGATGACTTTGTTGGTGAAGTAAAGTAAGTAAAATGCTTCTTAATTGGTCCGGTAACCAAGCGGGACTTTAATCGAAAAGAAAAGTAATGTGGATATACATAGCCTTCGACGAAAACTTGATACTCAAGCATGCATTATTTCAAGAATCATAACTGGGGATGTAGTTTTCTCAAGTTAGGAATTTTGAGTTTGGTGTATGAACGGTGCTCTTTGTCTGACTTGCTCAGCACGGGCATCCTAAACTCTAAAGCAGTAAACTCTCTTATATTATGTGGTATATTTTGCTCTATGATGACTGTTTGATAATGACTGTTCAAATACCCTGTTTATTGTTTGCAGAATCCCACTGGAACCTGTTTACCTTGAAGGAAGCCTCCCAGAAACAGTATACAATGTGGTCAAGGATGAAGAATACCGTGGAGAGATCAAAATTGGCCTTAAATTTTCTCCTGAGGTCGCTCTCCTTTACTTTTGTCAATGTTGCAGAATTATCATATAAAATTACTTTTTGGCTTGTCTGTAAGTGTATCTCGTGTTCATTTGCGACCTAATTTAACACTTAGACTCTCTTGTCGCAGGAAAGGACTGAAAGAAATTTCCAAATGGAAGAGGAAACTTATGGTGGATGGAAGCAGTCTTCATATGCAGATTGAGAACCACAACCACTCAATGAGATTGTTAATTGTATGGTTTGAGAGAATTGGTATCCTATTTGTGCTCAGAGATTAGACCTTTGTTATATGTAAAGAACTGTCCTGATGTTGATGGTTGGCTTTTTGCTTATGTTTAGATGTTTGGAATGAACTCTCGAAATTTTTATGGAATCAATAATGTATTAAGTATTCAAGAGTAACTCATCACTCGTTCCATAAATATTTGTGTTTTTGTTTTAAGAAATTACATCCAAACAATTCTCTTTAGTTAAAAATTAGGAATTTGTTTTCTTCTATTTCTGGCAAATGGTACAAAGTGGTTCGAGTTTTAAGTGGAAGTTGCTGAATGTGAAATGCCAGATTCGAGCATCCATTATGATACAGATTTGCTAAAAAGAAGAAAAAGAGCAATAAGCTGTTTTTCTCAAGACCTGTGCTGTTATTACATCCAAGCTACACTTTGCTCTAAAACTTCACCTTCCCCTAAAAGATCTGTTTCTATCTACGGAAGACTGCTGTTGGGAAGTGAATCCACTGCAGCTTGGTAGACTCACGTTTCCCAGAGTCAGCTGAGGATCTAAACTCAAGTGCTGTGCTGAAACAGATTTTTCGGGTCCGTCGAAGTGGGATGATATATCGTTTTGGAAGAGGTTAGGGGATCCAAAATCTGGCAGTGCTGGGCTACTGTCTTTTTGGCTGCGAGAGGACTCGAGTCGCTCCTCAAAGAAGCTTTGAATTTCTAGACTATCGTCTATTGGTATTGCACCTGTGAGAGTCTTGAATGCAAAATCCAAGCATGGATCTGCCCAGGAATCCCCAAAGGGAAAGGATAATGGAGTTTCTGATGTCATATGGCCCTTCGTTTGAAGCATTTGATGCTGATCATCGAGCACCATTTTGCTGCTCTCTTGACATGCATTGGTGCTATTAAATCGTTCGGAATTTACCTCAGGCGGGGGATGACGCAACTCACTGGGTGGCATGATTT GGAGGGGATTCAAAGCATCTCAACAAATGACACCACACGACGGGGTCTAATTTCTCGGCTTTTATGGCGGAGCATTGTCCGGCCCGGTTCATCTCGCCGGATCCTTTCGACATCCTCACTCTCTCTATATATATATGTATATTTCAACAAATAATTCTCTTACAAAATCCCAATTCATCTGAAAGGATCGAGATCCAAGGAGAGTGGGGAACACAAATTCGGATCTCTTCTTTTCGACCTTGATTCCATCCCCTTTTTCATCATCTACAAAAATGCCCGCCGGAACTCTTGAAGTTCTTCTTGTTTCCGCCAAGGGCCTTGAAAACACCGATTACCTCTGTAACATGGATCCTTATGTTACTCTTACTTGCCGCACACAGGAGCAGAAAAGCAGTGTTGCATCAGGAAAGGGATCTGACCCCGAATGGAATGAGACTTTTGTATTCACCATATCTGAGGGTGCAGAAGACCTCATCCTAAAGATATTGGACAGTGACAGTGGCACTCAAGATGACTTTGTTGGTGAAGTAAAAATCCCACTGGAACCTGTTTACCTTGAAGGAAGCCTCCCAGAAACAGTATACAATGTGGTCAAGGATGAAGAATACCGTGGAGAGATCAAAATTGGCCTTAAATTTTCTCCTGAGGAAAGGACTGAAAGAAATTTCCAAATGGAAGAGGAAACTTATGGTGGATGGAAGCAGTCTTCATATGCAGATTGAGAACCACAACCACTCAATGAGATTGTTAATTGTATGGTTTGAGAGAATTGGTATCCTATTTGTGCTCAGAGATTAGACCTTTGTTATATGTAAAGAACTGTCCTGATGTTGATGGTTGGCTTTTTGCTTATGTTTAGATGTTTGGAATGAACTCTCGAAATTTTTATGGAATCAATAATGTATTAAGTATTCAAGAGTAACTCATCACTCGTTCCATAAATATTTGTGTTTTTGTTTTAAGAAATTACATCCAAACAATTCTCTTTAGTTAAAAATTAGGAATTTGTTTTCTTCTATTTCTGGCAAATGGTACAAAGTGGTTCGAGTTTTAAGTGGAAGTTGCTGAATGTGAAATGCCAGATTCGAGCATCCATTATGATACAGATTTGCTAAAAAGAAGAAAAAGAGCAATAAGCTGTTTTTCTCAAGACCTGTGCTGTTATTACATCCAAGCTACACTTTGCTCTAAAACTTCACCTTCCCCTAAAAGATCTGTTTCTATCTACGGAAGACTGCTGTTGGGAAGTGAATCCACTGCAGCTTGGTAGACTCACGTTTCCCAGAGTCAGCTGAGGATCTAAACTCAAGTGCTGTGCTGAAACAGATTTTTCGGGTCCGTCGAAGTGGGATGATATATCGTTTTGGAAGAGGTTAGGGGATCCAAAATCTGGCAGTGCTGGGCTACTGTCTTTTTGGCTGCGAGAGGACTCGAGTCGCTCCTCAAAGAAGCTTTGAATTTCTAGACTATCGTCTATTGGTATTGCACCTGTGAGAGTCTTGAATGCAAAATCCAAGCATGGATCTGCCCAGGAATCCCCAAAGGGAAAGGATAATGGAGTTTCTGATGTCATATGGCCCTTCGTTTGAAGCATTTGATGCTGATCATCGAGCACCATTTTGCTGCTCTCTTGACATGCATTGGTGCTATTAAATCGTTCGGAATTTACCTCAGGCGGGGGATGACGCAACTCACTGGGTGGCATGATTT ATGCCCGCCGGAACTCTTGAAGTTCTTCTTGTTTCCGCCAAGGGCCTTGAAAACACCGATTACCTCTGTAACATGGATCCTTATGTTACTCTTACTTGCCGCACACAGGAGCAGAAAAGCAGTGTTGCATCAGGAAAGGGATCTGACCCCGAATGGAATGAGACTTTTGTATTCACCATATCTGAGGGTGCAGAAGACCTCATCCTAAAGATATTGGACAGTGACAGTGGCACTCAAGATGACTTTGTTGGTGAAGTAAAAATCCCACTGGAACCTGTTTACCTTGAAGGAAGCCTCCCAGAAACAGTATACAATGTGGTCAAGGATGAAGAATACCGTGGAGAGATCAAAATTGGCCTTAAATTTTCTCCTGAGGAAAGGACTGAAAGAAATTTCCAAATGGAAGAGGAAACTTATGGTGGATGGAAGCAGTCTTCATATGCAGATTGA MPAGTLEVLLVSAKGLENTDYLCNMDPYVTLTCRTQEQKSSVASGKGSDPEWNETFVFTISEGAEDLILKILDSDSGTQDDFVGEVKIPLEPVYLEGSLPETVYNVVKDEEYRGEIKIGLKFSPEERTERNFQMEEETYGGWKQSSYAD
BLAST of Lsi09G002900 vs. Swiss-Prot
Match: ERG3_ORYSI (Elicitor-responsive protein 3 OS=Oryza sativa subsp. indica GN=ERG3 PE=2 SV=1) HSP 1 Score: 218.8 bits (556), Expect = 4.1e-56 Identity = 104/146 (71.23%), Postives = 121/146 (82.88%), Query Frame = 1
BLAST of Lsi09G002900 vs. Swiss-Prot
Match: ERG3_ORYSJ (Elicitor-responsive protein 3 OS=Oryza sativa subsp. japonica GN=ERG3 PE=2 SV=1) HSP 1 Score: 218.8 bits (556), Expect = 4.1e-56 Identity = 104/146 (71.23%), Postives = 121/146 (82.88%), Query Frame = 1
BLAST of Lsi09G002900 vs. Swiss-Prot
Match: Y1322_ARATH (C2 domain-containing protein At1g63220 OS=Arabidopsis thaliana GN=At1g63220 PE=1 SV=1) HSP 1 Score: 204.1 bits (518), Expect = 1.0e-51 Identity = 97/145 (66.90%), Postives = 114/145 (78.62%), Query Frame = 1
BLAST of Lsi09G002900 vs. Swiss-Prot
Match: ERG1_ORYSJ (Elicitor-responsive protein 1 OS=Oryza sativa subsp. japonica GN=ERG1 PE=2 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 4.0e-19 Identity = 60/157 (38.22%), Postives = 86/157 (54.78%), Query Frame = 1
BLAST of Lsi09G002900 vs. Swiss-Prot
Match: ERG1_ORYSI (Elicitor-responsive protein 1 OS=Oryza sativa subsp. indica GN=ERG1 PE=2 SV=2) HSP 1 Score: 95.9 bits (237), Expect = 4.0e-19 Identity = 60/157 (38.22%), Postives = 86/157 (54.78%), Query Frame = 1
BLAST of Lsi09G002900 vs. TrEMBL
Match: A0A0A0KMM6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G154910 PE=4 SV=1) HSP 1 Score: 281.2 bits (718), Expect = 7.4e-73 Identity = 138/149 (92.62%), Postives = 145/149 (97.32%), Query Frame = 1
BLAST of Lsi09G002900 vs. TrEMBL
Match: A0A061G691_THECC (Elicitor-responsive protein, putative OS=Theobroma cacao GN=TCM_016210 PE=4 SV=1) HSP 1 Score: 240.7 bits (613), Expect = 1.1e-60 Identity = 115/149 (77.18%), Postives = 130/149 (87.25%), Query Frame = 1
BLAST of Lsi09G002900 vs. TrEMBL
Match: A0A0D2P1S1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G022600 PE=4 SV=1) HSP 1 Score: 235.3 bits (599), Expect = 4.7e-59 Identity = 111/149 (74.50%), Postives = 131/149 (87.92%), Query Frame = 1
BLAST of Lsi09G002900 vs. TrEMBL
Match: A0A0B0NTJ8_GOSAR (Elicitor-responsive 3 OS=Gossypium arboreum GN=F383_04259 PE=4 SV=1) HSP 1 Score: 231.9 bits (590), Expect = 5.2e-58 Identity = 110/149 (73.83%), Postives = 130/149 (87.25%), Query Frame = 1
BLAST of Lsi09G002900 vs. TrEMBL
Match: A9PD47_POPTR (C2 domain-containing family protein OS=Populus trichocarpa GN=POPTR_0002s15700g PE=2 SV=1) HSP 1 Score: 226.5 bits (576), Expect = 2.2e-56 Identity = 101/149 (67.79%), Postives = 127/149 (85.23%), Query Frame = 1
BLAST of Lsi09G002900 vs. TAIR10
Match: AT1G63220.1 (AT1G63220.1 Calcium-dependent lipid-binding (CaLB domain) family protein) HSP 1 Score: 204.1 bits (518), Expect = 5.8e-53 Identity = 97/145 (66.90%), Postives = 114/145 (78.62%), Query Frame = 1
BLAST of Lsi09G002900 vs. TAIR10
Match: AT3G55470.1 (AT3G55470.1 Calcium-dependent lipid-binding (CaLB domain) family protein) HSP 1 Score: 88.2 bits (217), Expect = 4.7e-18 Identity = 57/157 (36.31%), Postives = 88/157 (56.05%), Query Frame = 1
BLAST of Lsi09G002900 vs. TAIR10
Match: AT4G00467.1 (AT4G00467.1 Calcium-dependent lipid-binding (CaLB domain) family protein) HSP 1 Score: 76.3 bits (186), Expect = 1.8e-14 Identity = 46/141 (32.62%), Postives = 74/141 (52.48%), Query Frame = 1
BLAST of Lsi09G002900 vs. TAIR10
Match: AT4G34150.1 (AT4G34150.1 Calcium-dependent lipid-binding (CaLB domain) family protein) HSP 1 Score: 60.8 bits (146), Expect = 8.0e-10 Identity = 33/118 (27.97%), Postives = 62/118 (52.54%), Query Frame = 1
BLAST of Lsi09G002900 vs. TAIR10
Match: AT1G03370.1 (AT1G03370.1 C2 calcium/lipid-binding and GRAM domain containing protein) HSP 1 Score: 58.9 bits (141), Expect = 3.0e-09 Identity = 30/89 (33.71%), Postives = 49/89 (55.06%), Query Frame = 1
BLAST of Lsi09G002900 vs. NCBI nr
Match: gi|659073747|ref|XP_008437230.1| (PREDICTED: elicitor-responsive protein 3 [Cucumis melo]) HSP 1 Score: 290.4 bits (742), Expect = 1.8e-75 Identity = 140/149 (93.96%), Postives = 147/149 (98.66%), Query Frame = 1
BLAST of Lsi09G002900 vs. NCBI nr
Match: gi|449452360|ref|XP_004143927.1| (PREDICTED: elicitor-responsive protein 3 [Cucumis sativus]) HSP 1 Score: 281.2 bits (718), Expect = 1.1e-72 Identity = 138/149 (92.62%), Postives = 145/149 (97.32%), Query Frame = 1
BLAST of Lsi09G002900 vs. NCBI nr
Match: gi|590677965|ref|XP_007040166.1| (Elicitor-responsive protein, putative [Theobroma cacao]) HSP 1 Score: 240.7 bits (613), Expect = 1.6e-60 Identity = 115/149 (77.18%), Postives = 130/149 (87.25%), Query Frame = 1
BLAST of Lsi09G002900 vs. NCBI nr
Match: gi|823183043|ref|XP_012488715.1| (PREDICTED: elicitor-responsive protein 3-like [Gossypium raimondii]) HSP 1 Score: 235.3 bits (599), Expect = 6.7e-59 Identity = 111/149 (74.50%), Postives = 131/149 (87.92%), Query Frame = 1
BLAST of Lsi09G002900 vs. NCBI nr
Match: gi|728834963|gb|KHG14406.1| (Elicitor-responsive 3 [Gossypium arboreum]) HSP 1 Score: 231.9 bits (590), Expect = 7.4e-58 Identity = 110/149 (73.83%), Postives = 130/149 (87.25%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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