Lsi09G002660 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATCCGAGCTTCTTGTCACTGTCCGTTCACTTTTTGTAATTGCTATTTCCTTGCATTTCATTGAAGCTCAGCTCTGTTGATCCTACAATGGCTTCCCAAGCTTCAAATCACCTGGAATCCATTTACGACTTCACCGTCAAAGTTTGTTCTCATTATTAACTCTTCACTTTTCCTGTGTTCTGCGCCGATTTCCCTCTCTTTCTGTGCTTATTGTTGGAAAGTTTGGATAAAAAATTCATTGTATTTTCACATGAATTCGTGGGGTATTCAAATTAACAATTCTGGGAACTTGTCTGTGGCTGAAACGATTCTAAACGAGTGTTTATTAGGGACTTATTTGATTCTAGTTCTGATGTTTTATTTGATTAACGAAGAATCGAGGGGACTGAGTGGGAAATTATGGTGAAGACTAGGGCTGAATTTGTGAATTTCTCTTCTGAGGAATGGAAGGGGTTTTTGTTAAATTTGAATGCATCTTTTGAATTGGATGTTAATTGTCGTTTTTATTTGTTTCAATTTGTAGATAAATCTAGTCCAGCTTCTTGGCCTTTGTGCTTTATTCATAGGAAAAGCTCTATTGCTGTTGATCTTAGGATGAATTTTAGGAATACTTTCTGATATTGATTCAAATTCATGTGGCATTTACGTTGCGTCTCTCCTTTTGTTTGCAGGATGCAGAGGGAAATGATATCAACCTTAGCATATACAAGGGTAAAGTCCTCCTCATTGTCAACGTTGCTTCCAAATGGTATGTTCGGTTTCTTTCACTTTCGATGTATGCACCTATATGATCTTTAATTTGCAACAATATTTTGTTCTTTCATTGGGCTGTACAAAGAGGAAAGACATGTTTGAACAATATTTGGTTTTTTCATTGTTGTTTCATGGTAGTTAGAATCACTTTTGTTATTTTTAAAATTGCTCTGAAACATGCTTTTAATCATTCAAAATCAATTTTGAGAATATGAAAATCGCATTTAAAGGTATAAAATTAAGTATTAAATTAATTTTGAGTGATTTTAAACATGAAAAATAAAATAAAAAAGTGATAACAATTTCAAAATCACTTCCAAACATGCACTAGTGGATAATTGACTTTCGGTTGCTCCAATTATTTACCACTCTTTGCTGATGGTTCTAAATGTTTTTGCTATTATTTTTATACCTTGCAACAGTGGGATGACAAATTCGAACTATCTGGAGTTGAACCAACTATACGAGAAATACAAAGAACACGGTTACCCTTCTATCACTCTCTTGTTGAAAATCATGCAAATTGCTTATTTAGTATATTCTTGCTGGTTTTGTTCCTTTTATTTAAGAATTCTCTTTGTAGATTCCTGTTCTTTTCCTTTTTTTTCTTTCTTTTTTTTTTTTCTTTTTGTTGTCTATACTTAGAAAATTTGTTGGTAATATATGTATCCATATCGTGCCTGTATCTAAAACTTTTAGAGATTAACATGTTACTTTGTCCATGCTGTGTTGTGCCTGTATCTCATGTCTATGTTTATGCTTCCTTAAGCTGTTAAACATTGACAAATTCAACACCCTATTAAAAATTTGAAACTCTCTTGCCTATCATTACTACCTGATCTTTAGCCTTAGCATATTTGGCCTTGGCTTCATGTGGAGTTTTTCCAATTCTTAGCAAGAATGATGACTTCTACTACTTTAACTCTCTTTCATTGAGGTTATTGCAGGTTTGGAAATTCTGGCATTTCCTTGTAATCAGTTTGGCGACGAGGAACCAGGAAGTAATGATGAGATCAAAGATTTTGTCTGCAGTCGTTTCAAATCAGAATTTCCAATTTTTGACAAGGCAAGTCTAATAGTATTATGTATGTGTGTATATCTACCAAAGTATGCTTCATTTCACTTTAACCATTAAGAACACCTTATTTTTCTTTCTATAAGATTGAAGTAAATGGGAACAATTCTGCTCCACTCTACAAATTTCTAAAACTGGGCAAATGGGGTATATTTGGGGACGATATTCAGTGGAATTTTGCCAAGTTTCTGATTGATAAGGATGGGAAAGTTGTTGATCGTTATTACCCCACAACATCACCTCTCAGCATTGAGGTAAACCAAATACTGGCAACTTAAATTGTTAAGGACTCAGGAGTATCCTCATTATTTTAACCACCTGATTTTGCTGCAGCATGATATCAAGAAGCTGTTGGGGGTCTTATGAGCAATGGAACATACAAGTTTGAGCAATGACATACTGCTTGTAGCTGAAATACTGCTGCTGATCAATCTCGACGACGGATTTTGTACTTGTTACAACATTGTTGAATTTTGAGTTGAGAACTTAACAGTGTATGGTTGGAATGCTGTAATTCCAAGATTCATGAATATATTATTGAAGACCATATATAATTGATCTGTAATCTATAAAATTCCACATAACATATTGAATGGATCAAAGTACAAGTCTTTGAACAAAATTCTAATTCCTATTCCATTCCA ATCCGAGCTTCTTGTCACTGTCCGTTCACTTTTTGTAATTGCTATTTCCTTGCATTTCATTGAAGCTCAGCTCTGTTGATCCTACAATGGCTTCCCAAGCTTCAAATCACCTGGAATCCATTTACGACTTCACCGTCAAAGATGCAGAGGGAAATGATATCAACCTTAGCATATACAAGGGTAAAGTCCTCCTCATTGTCAACGTTGCTTCCAAATGTGGGATGACAAATTCGAACTATCTGGAGTTGAACCAACTATACGAGAAATACAAAGAACACGGTTTGGAAATTCTGGCATTTCCTTGTAATCAGTTTGGCGACGAGGAACCAGGAAGTAATGATGAGATCAAAGATTTTGTCTGCAGTCGTTTCAAATCAGAATTTCCAATTTTTGACAAGGCAAGTCTAATAGTATTATTAAATGGGAACAATTCTGCTCCACTCTACAAATTTCTAAAACTGGGCAAATGGGGTATATTTGGGGACGATATTCAGTGGAATTTTGCCAAGTTTCTGATTGATAAGGATGGGAAAGTTGTTGATCGTTATTACCCCACAACATCACCTCTCAGCATTGAGCATGATATCAAGAAGCTGTTGGGGGTCTTATGAGCAATGGAACATACAAGTTTGAGCAATGACATACTGCTTGTAGCTGAAATACTGCTGCTGATCAATCTCGACGACGGATTTTGTACTTGTTACAACATTGTTGAATTTTGAGTTGAGAACTTAACAGTGTATGGTTGGAATGCTGTAATTCCAAGATTCATGAATATATTATTGAAGACCATATATAATTGATCTGTAATCTATAAAATTCCACATAACATATTGAATGGATCAAAGTACAAGTCTTTGAACAAAATTCTAATTCCTATTCCATTCCA ATGGCTTCCCAAGCTTCAAATCACCTGGAATCCATTTACGACTTCACCGTCAAAGATGCAGAGGGAAATGATATCAACCTTAGCATATACAAGGGTAAAGTCCTCCTCATTGTCAACGTTGCTTCCAAATGTGGGATGACAAATTCGAACTATCTGGAGTTGAACCAACTATACGAGAAATACAAAGAACACGGTTTGGAAATTCTGGCATTTCCTTGTAATCAGTTTGGCGACGAGGAACCAGGAAGTAATGATGAGATCAAAGATTTTGTCTGCAGTCGTTTCAAATCAGAATTTCCAATTTTTGACAAGGCAAGTCTAATAGTATTATTAAATGGGAACAATTCTGCTCCACTCTACAAATTTCTAAAACTGGGCAAATGGGGTATATTTGGGGACGATATTCAGTGGAATTTTGCCAAGTTTCTGATTGATAAGGATGGGAAAGTTGTTGATCGTTATTACCCCACAACATCACCTCTCAGCATTGAGCATGATATCAAGAAGCTGTTGGGGGTCTTATGA MASQASNHLESIYDFTVKDAEGNDINLSIYKGKVLLIVNVASKCGMTNSNYLELNQLYEKYKEHGLEILAFPCNQFGDEEPGSNDEIKDFVCSRFKSEFPIFDKASLIVLLNGNNSAPLYKFLKLGKWGIFGDDIQWNFAKFLIDKDGKVVDRYYPTTSPLSIEHDIKKLLGVL
BLAST of Lsi09G002660 vs. Swiss-Prot
Match: GPX8_ARATH (Probable glutathione peroxidase 8 OS=Arabidopsis thaliana GN=GPX8 PE=2 SV=1) HSP 1 Score: 266.2 bits (679), Expect = 2.6e-70 Identity = 121/169 (71.60%), Postives = 147/169 (86.98%), Query Frame = 1
BLAST of Lsi09G002660 vs. Swiss-Prot
Match: GPX6_ARATH (Probable phospholipid hydroperoxide glutathione peroxidase 6, mitochondrial OS=Arabidopsis thaliana GN=GPX6 PE=2 SV=2) HSP 1 Score: 261.5 bits (667), Expect = 6.4e-69 Identity = 123/169 (72.78%), Postives = 147/169 (86.98%), Query Frame = 1
BLAST of Lsi09G002660 vs. Swiss-Prot
Match: GPX4_MESCR (Probable phospholipid hydroperoxide glutathione peroxidase OS=Mesembryanthemum crystallinum GN=GPXMC1 PE=2 SV=1) HSP 1 Score: 257.7 bits (657), Expect = 9.2e-68 Identity = 120/172 (69.77%), Postives = 149/172 (86.63%), Query Frame = 1
BLAST of Lsi09G002660 vs. Swiss-Prot
Match: GPX4_SPIOL (Probable phospholipid hydroperoxide glutathione peroxidase OS=Spinacia oleracea PE=2 SV=1) HSP 1 Score: 256.1 bits (653), Expect = 2.7e-67 Identity = 117/173 (67.63%), Postives = 148/173 (85.55%), Query Frame = 1
BLAST of Lsi09G002660 vs. Swiss-Prot
Match: GPX4_NICSY (Probable phospholipid hydroperoxide glutathione peroxidase OS=Nicotiana sylvestris PE=2 SV=1) HSP 1 Score: 255.0 bits (650), Expect = 6.0e-67 Identity = 121/173 (69.94%), Postives = 150/173 (86.71%), Query Frame = 1
BLAST of Lsi09G002660 vs. TrEMBL
Match: A0A0A0KQX0_CUCSA (Glutathione peroxidase OS=Cucumis sativus GN=Csa_5G154190 PE=3 SV=1) HSP 1 Score: 325.5 bits (833), Expect = 4.0e-86 Identity = 155/173 (89.60%), Postives = 164/173 (94.80%), Query Frame = 1
BLAST of Lsi09G002660 vs. TrEMBL
Match: B9RCA7_RICCO (Glutathione peroxidase OS=Ricinus communis GN=RCOM_1686480 PE=3 SV=1) HSP 1 Score: 298.5 bits (763), Expect = 5.2e-78 Identity = 141/173 (81.50%), Postives = 158/173 (91.33%), Query Frame = 1
BLAST of Lsi09G002660 vs. TrEMBL
Match: L8AXD3_ZIZJJ (Glutathione peroxidase OS=Ziziphus jujuba GN=GPX PE=2 SV=1) HSP 1 Score: 295.0 bits (754), Expect = 5.8e-77 Identity = 136/164 (82.93%), Postives = 154/164 (93.90%), Query Frame = 1
BLAST of Lsi09G002660 vs. TrEMBL
Match: A0A0S3QXP1_PHAAN (Glutathione peroxidase OS=Vigna angularis var. angularis GN=Vigan.01G053900 PE=3 SV=1) HSP 1 Score: 295.0 bits (754), Expect = 5.8e-77 Identity = 136/173 (78.61%), Postives = 158/173 (91.33%), Query Frame = 1
BLAST of Lsi09G002660 vs. TrEMBL
Match: A0A0H4M9I0_ZIZJJ (Glutathione peroxidase (Fragment) OS=Ziziphus jujuba var. spinosa GN=GPX PE=2 SV=1) HSP 1 Score: 293.9 bits (751), Expect = 1.3e-76 Identity = 136/163 (83.44%), Postives = 153/163 (93.87%), Query Frame = 1
BLAST of Lsi09G002660 vs. TAIR10
Match: AT1G63460.1 (AT1G63460.1 glutathione peroxidase 8) HSP 1 Score: 266.2 bits (679), Expect = 1.5e-71 Identity = 121/169 (71.60%), Postives = 147/169 (86.98%), Query Frame = 1
BLAST of Lsi09G002660 vs. TAIR10
Match: AT4G11600.1 (AT4G11600.1 glutathione peroxidase 6) HSP 1 Score: 261.5 bits (667), Expect = 3.6e-70 Identity = 123/169 (72.78%), Postives = 147/169 (86.98%), Query Frame = 1
BLAST of Lsi09G002660 vs. TAIR10
Match: AT4G31870.1 (AT4G31870.1 glutathione peroxidase 7) HSP 1 Score: 230.3 bits (586), Expect = 8.9e-61 Identity = 109/162 (67.28%), Postives = 131/162 (80.86%), Query Frame = 1
BLAST of Lsi09G002660 vs. TAIR10
Match: AT2G43350.1 (AT2G43350.1 glutathione peroxidase 3) HSP 1 Score: 223.8 bits (569), Expect = 8.3e-59 Identity = 108/161 (67.08%), Postives = 127/161 (78.88%), Query Frame = 1
BLAST of Lsi09G002660 vs. TAIR10
Match: AT2G31570.1 (AT2G31570.1 glutathione peroxidase 2) HSP 1 Score: 223.4 bits (568), Expect = 1.1e-58 Identity = 107/163 (65.64%), Postives = 128/163 (78.53%), Query Frame = 1
BLAST of Lsi09G002660 vs. NCBI nr
Match: gi|449452332|ref|XP_004143913.1| (PREDICTED: probable glutathione peroxidase 8 [Cucumis sativus]) HSP 1 Score: 325.5 bits (833), Expect = 5.7e-86 Identity = 155/173 (89.60%), Postives = 164/173 (94.80%), Query Frame = 1
BLAST of Lsi09G002660 vs. NCBI nr
Match: gi|659073791|ref|XP_008437255.1| (PREDICTED: probable glutathione peroxidase 8 [Cucumis melo]) HSP 1 Score: 324.7 bits (831), Expect = 9.8e-86 Identity = 154/173 (89.02%), Postives = 165/173 (95.38%), Query Frame = 1
BLAST of Lsi09G002660 vs. NCBI nr
Match: gi|255537449|ref|XP_002509791.1| (PREDICTED: probable glutathione peroxidase 8 [Ricinus communis]) HSP 1 Score: 298.5 bits (763), Expect = 7.5e-78 Identity = 141/173 (81.50%), Postives = 158/173 (91.33%), Query Frame = 1
BLAST of Lsi09G002660 vs. NCBI nr
Match: gi|951001342|ref|XP_014507060.1| (PREDICTED: probable glutathione peroxidase 8 isoform X2 [Vigna radiata var. radiata]) HSP 1 Score: 297.0 bits (759), Expect = 2.2e-77 Identity = 137/173 (79.19%), Postives = 159/173 (91.91%), Query Frame = 1
BLAST of Lsi09G002660 vs. NCBI nr
Match: gi|440647206|dbj|BAM74249.1| (glutathione peroxidase [Ziziphus jujuba]) HSP 1 Score: 295.0 bits (754), Expect = 8.3e-77 Identity = 136/164 (82.93%), Postives = 154/164 (93.90%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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