Lsi09G001810 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCATCTCTGCATTGCAACAAACCAGCTGATCATGGGCACGGCCGGCACCAGCAGAAGCATGACCAACAGCATCACCATTGCTTCGGCGGCCACGTCTCTGACAAGATCACAGGCGTCTTCAAAGGCCACCATCATGGCCAGGCTCCACCAGCATCAGTATGGGCGCCGGAGCACCACTTTGCCAATGCCGCCTACTGCAAGCCAGCCCACCATCATGGCCAGGCTCCACCGGCATCGGCATCGGCGCCGGTGGACCACTTTGCCAATGCCGGCTACTGGAACCCAGCCTACCATCATGGCCAGGCTCCACTGATATCGGCATTGGAGCCGGTGCACCACTTTGCCAATGTCGGCTACTGGAAGCCAGCCCACCATCATGGCCAGGCTCCACCGGCATCGGCATCGGCGTCGGTGCACCACTTTGCCAATGCCGGCTACTGCAAGCCAGCCCACCATCATGACCAGGCTCCACCGGCATCGGCATCGGCGCTAGTGCACCACTCTGCCGATGCCGGCTACTGCAAGCCAGCCCACCATCATGACCAGGCTCCACCGGCATCGGCATCGGCGCTAGTGCACCACTCTGCCGATGCCGGCTACTGCAAGCCGGCCCACCATCATGGCCAGGCTCCACCGGCATCAACATCGGCGTGCACCTGCAAGCCAGCCCACCATCATGGCCAGGCTCCACCGGCATCAGCATCGGCGTGCACCTACAAACCAGCCCACCATCATGGCCAGGATCCACCGGCATCGACGCCGGTGCACCACTCTACCAATGCCGGCTACTGCAAGCCAGCTGGGTCAAATAAGAAGGAACACCACAAGAATAGAGAAGGGGGTTTTCTTCATCAGATCAATGATGTCTGGTCTGACCACAGCAGTGATAGTGAAAATGAATGTCACAAACCCCATCACAACAAGAAGGTAAGTTTAATTTTCTTGCTTCGATTCTCTTATTTTGATTTCTTCGATATATAATTTCATGTCGGGTTTTACTATCATTGTAAAATAGAATTCGCCAAGTGTTTGATTGTTTACCTACGAAAACGTGAGTTGCTGGGTTTAGTTTTAGCATGTTGACAACCGTGTCATATGATAGTAATAACCGCTGATTTGCACAATTGATCATAGACATGGGTTGAAACGTATTGACATAAAGTCTATGACTTTCACGAGTTATGCTATGGCGTTCGTAATATACACTACTAGTTTGGGCAAGCACGCTCAACTGCAAAGTTTTGATAGGATCTTGTGCATTAGAGTTAGTATCTTTTTATAAATTTTTTTTTTTATTTGTATTTTCTCTTTGCTTTTATTATGTAATTATTTTGCCTGGATTTGCAGAACTGAATTGAGGGAGGAAGGTGAATGAAATGAAGGAACCAGTGGATGCCTCTAAACTACTACTGCTACTAAGTATTTGATACTACTGCTACTAAGAATTTGAGCGAAACAAAAATAAAGATCTAGATGGTAATTTATGCCTCCTACTGTACTTACTTATTTTTCCTCGTTTGAAATAAAACTTATGGATATATGAATCTAAAAATAGTTCAATAGATATGACATCAATTACTATTTTAAAAAGTCAATAGTTCGATTCTCCACTCACTCAAATAATATCCACTCTGTGCTTTTCAACCTCAAATGTACCTTGTACATAAAAAGAAAATGAAATTTCATTATTGATATTTGGAAACTAATATGTTCATGTAAAATGAATATGCAATTCACAAAAAAGTTGAATGAGAGGCATCTGAAATTCTGAATAAGGACTAAACAAAACAGTAAAACGGAAAAATGAGTTCCCAACTGTGCTCTATTGAACAAAACTAAAGGCGAGAAAAAGGAGAGGCATTAAAACTACTAGCAAACTTATGTAACCATGACAGCAAAACAACTTCCTTACACATTACAAAGAAAAGCAGCTATAACAACTTCCTTTACCAACCAAAAAAGTCCTCAGTAACCATGACAGCAAAACAAGAAAAATCAGGACACCTTCCGAGTTCGATTTCCTTCTCTTGAACTGTTTCCGTGGCTGTTTCGCATTCTTCTTAGCTTCGGTTTCCATTGCCACAGAATGAAACTCTTTTGGTGTTTCTGTTTCTCTGAAGATTTGTTGCTTATTTATTTGTTGAAGATTGGTTGTTTCTTTTTCCCTTAGCTGTAGCTAGCTCTCTGAACTCAACTGGAACGACAAGTGCAACCAAACAAAGCAAACAACTGATCAGCCATTGACTTGTAGTTATCAAGCTTCAACTATTTTACCCAAATGACCCTTCTCTCCTCTTTTACTTTTTTCATATATTATTAGAGCTTCTACCACTGTGAAAAAGAGAATATTACCTTCTGATTAAGGGTCAAAATCAAAATTTGAATATGTGGTGGGTACGATTAAATTTTGACCAAAAATCAAACCAAACCAATCTACGTTTGATCATAGAATCAGTTTGATTGTGCTTGTCTTTTGATATTAGGTCTGAAAGGTTGATGAGGACAAGGCCTACCATGTTGGGTATCTTGTTCTTTGGTCGGGTCCGGGTCGGGTTGGACTCTTTTATTGTTGAGTCGTGGAGCTAA ATGGCATCTCTGCATTGCAACAAACCAGCTGATCATGGGCACGGCCGGCACCAGCAGAAGCATGACCAACAGCATCACCATTGCTTCGGCGGCCACGTCTCTGACAAGATCACAGGCGTCTTCAAAGGCCACCATCATGGCCAGGCTCCACCAGCATCAGTATGGGCGCCGGAGCACCACTTTGCCAATGCCGCCTACTGCAAGCCAGCCCACCATCATGGCCAGGCTCCACCGGCATCGGCATCGGCGCCGGTGGACCACTTTGCCAATGCCGGCTACTGGAACCCAGCCTACCATCATGGCCAGGCTCCACTGATATCGGCATTGGAGCCGGTGCACCACTTTGCCAATGTCGGCTACTGGAAGCCAGCCCACCATCATGGCCAGGCTCCACCGGCATCGGCATCGGCGTCGGTGCACCACTTTGCCAATGCCGGCTACTGCAAGCCAGCCCACCATCATGACCAGGCTCCACCGGCATCGGCATCGGCGCTAGTGCACCACTCTGCCGATGCCGGCTACTGCAAGCCAGCCCACCATCATGACCAGGCTCCACCGGCATCGGCATCGGCGCTAGTGCACCACTCTGCCGATGCCGGCTACTGCAAGCCGGCCCACCATCATGGCCAGGCTCCACCGGCATCAACATCGGCGTGCACCTGCAAGCCAGCCCACCATCATGGCCAGGCTCCACCGGCATCAGCATCGGCGTGCACCTACAAACCAGCCCACCATCATGGCCAGGATCCACCGGCATCGACGCCGGTGCACCACTCTACCAATGCCGGCTACTGCAAGCCAGCTGGGTCAAATAAGAAGGAACACCACAAGAATAGAGAAGGGGGTTTTCTTCATCAGATCAATGATGTCTGGTCTGAAAGGTTGATGAGGACAAGGCCTACCATGTTGGGTATCTTGTTCTTTGGTCGGGTCCGGGTCGGGTTGGACTCTTTTATTGTTGAGTCGTGGAGCTAA ATGGCATCTCTGCATTGCAACAAACCAGCTGATCATGGGCACGGCCGGCACCAGCAGAAGCATGACCAACAGCATCACCATTGCTTCGGCGGCCACGTCTCTGACAAGATCACAGGCGTCTTCAAAGGCCACCATCATGGCCAGGCTCCACCAGCATCAGTATGGGCGCCGGAGCACCACTTTGCCAATGCCGCCTACTGCAAGCCAGCCCACCATCATGGCCAGGCTCCACCGGCATCGGCATCGGCGCCGGTGGACCACTTTGCCAATGCCGGCTACTGGAACCCAGCCTACCATCATGGCCAGGCTCCACTGATATCGGCATTGGAGCCGGTGCACCACTTTGCCAATGTCGGCTACTGGAAGCCAGCCCACCATCATGGCCAGGCTCCACCGGCATCGGCATCGGCGTCGGTGCACCACTTTGCCAATGCCGGCTACTGCAAGCCAGCCCACCATCATGACCAGGCTCCACCGGCATCGGCATCGGCGCTAGTGCACCACTCTGCCGATGCCGGCTACTGCAAGCCAGCCCACCATCATGACCAGGCTCCACCGGCATCGGCATCGGCGCTAGTGCACCACTCTGCCGATGCCGGCTACTGCAAGCCGGCCCACCATCATGGCCAGGCTCCACCGGCATCAACATCGGCGTGCACCTGCAAGCCAGCCCACCATCATGGCCAGGCTCCACCGGCATCAGCATCGGCGTGCACCTACAAACCAGCCCACCATCATGGCCAGGATCCACCGGCATCGACGCCGGTGCACCACTCTACCAATGCCGGCTACTGCAAGCCAGCTGGGTCAAATAAGAAGGAACACCACAAGAATAGAGAAGGGGGTTTTCTTCATCAGATCAATGATGTCTGGTCTGAAAGGTTGATGAGGACAAGGCCTACCATGTTGGGTATCTTGTTCTTTGGTCGGGTCCGGGTCGGGTTGGACTCTTTTATTGTTGAGTCGTGGAGCTAA MASLHCNKPADHGHGRHQQKHDQQHHHCFGGHVSDKITGVFKGHHHGQAPPASVWAPEHHFANAAYCKPAHHHGQAPPASASAPVDHFANAGYWNPAYHHGQAPLISALEPVHHFANVGYWKPAHHHGQAPPASASASVHHFANAGYCKPAHHHDQAPPASASALVHHSADAGYCKPAHHHDQAPPASASALVHHSADAGYCKPAHHHGQAPPASTSACTCKPAHHHGQAPPASASACTYKPAHHHGQDPPASTPVHHSTNAGYCKPAGSNKKEHHKNREGGFLHQINDVWSERLMRTRPTMLGILFFGRVRVGLDSFIVESWS
BLAST of Lsi09G001810 vs. TrEMBL
Match: D4HPR8_PLAFA (Histidine-rich protein 2 (Fragment) OS=Plasmodium falciparum GN=HRPII PE=4 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 2.5e-09 Identity = 79/239 (33.05%), Postives = 102/239 (42.68%), Query Frame = 1
BLAST of Lsi09G001810 vs. TrEMBL
Match: D4HQ11_PLAFA (Histidine-rich protein 2 (Fragment) OS=Plasmodium falciparum GN=HRPII PE=4 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 5.3e-07 Identity = 69/228 (30.26%), Postives = 87/228 (38.16%), Query Frame = 1
BLAST of Lsi09G001810 vs. NCBI nr
Match: gi|659074028|ref|XP_008437383.1| (PREDICTED: uncharacterized protein LOC103482815 isoform X1 [Cucumis melo]) HSP 1 Score: 95.5 bits (236), Expect = 1.8e-16 Identity = 50/70 (71.43%), Postives = 53/70 (75.71%), Query Frame = 1
BLAST of Lsi09G001810 vs. NCBI nr
Match: gi|659074030|ref|XP_008437384.1| (PREDICTED: uncharacterized protein LOC103482815 isoform X2 [Cucumis melo]) HSP 1 Score: 95.5 bits (236), Expect = 1.8e-16 Identity = 50/70 (71.43%), Postives = 53/70 (75.71%), Query Frame = 1
BLAST of Lsi09G001810 vs. NCBI nr
Match: gi|269101344|gb|ACZ25599.1| (histidine-rich protein 2, partial [Plasmodium falciparum]) HSP 1 Score: 71.2 bits (173), Expect = 3.6e-09 Identity = 79/239 (33.05%), Postives = 102/239 (42.68%), Query Frame = 1
BLAST of Lsi09G001810 vs. NCBI nr
Match: gi|269101530|gb|ACZ25692.1| (histidine-rich protein 2, partial [Plasmodium falciparum]) HSP 1 Score: 63.5 bits (153), Expect = 7.6e-07 Identity = 69/228 (30.26%), Postives = 87/228 (38.16%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |