Lsi09G001600 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi09G001600
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Electron transporter/ thiol-disulfide exchange intermediate
Location	chr09 : 1673090 .. 1675171 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GATAAAATATAGAAAAATAACACATTTAGCCAAATAATAAACATAATCTTATTGACATGTAAATAAGTGTTAATATGTTAATTAATGTAAGAAAGTAGCAAGAAAAAAAGTTCAAAAACAAATTTATATTTTAAACACAAACTTTTTAATGCTATCACAAATTAATAAATTTTTTAGATTTAATAACTCAAACCCAACATTGTCTATTGATTGAGAGATGGGGGAACTTTGTAAGCCACCCACCAAAACTGCCAAATAAAACACTAATTCCCAATCTTGCCAACGTGGCAAACACCCACTAAACCCACGTGTCCACTCATACACCACTTCTCATCCTGAGGCGTCGTACAGAATTACACAAAAACTTCAAAATCCGATAAGCTTCATTCTTTCCGATTTCCACCACACAAAAAATCCCTAATTGGCCCCTTCCAATTTCCCACCACATTTCCAATTCCACCCTTCTATAAACTATAAACCCAACACCCAAAAACCCATAAAAGTAATTTTGAAAAAACTTTCTATAAAAAAAAAACAAAAACAAAAAAAAAAATCCCTATACCCCGCCGCCGGAAAGTTCATCGACGGCAATGGGGTGCTCCTCTTCGAAGAGAATCGAGGCCACTGTTGACGTGTACCGTCCGGCGCCGGCGAGCTTTGCGGTGTTTGACATAAACGCCATAGAGGAGCCTTGGGTTAAAGTCATGGAGGAGCTACCGCCACCACCCGCGGCGGATCCGGTGAAGGAGGAGAAATCGGCGATTGTTCCGGTTCCGATTCTGGAGAAGCTCAGTAGTTTCGAGTCTGAAGCTCCTCATTCGTGGGATGAGGTCAGTAAAGCCCTTGAAGACCTCAAACCTGCTCTCCGCCCTGTTACAGAACCAACGCCGACGAAAGCCCCTGCCGCCGTGGTTGCTAAACAACCCCCACGTAAGAGCTCGAGTTTCCACACAGTGGCAGAGCTCGACGCCAAGTTGTCGCCCTCCGCCAAGCCGGCCGCCGAGTCTAAGCCTTCTGGGTTGAGAAAAGCAGCGTCTGTTAGACCTGGACCGGAAAAACCCGAGCCAAGAACCGGAGACCCAGACCGGTTCAAGTCAGTTAAAGAGAACATATTTCTAGTGAGGGACAGAGAGGAGAGAGAAAGAGAGGGGCAGAAACCGGTCCGGTTCGACCCGCTGAGTGAGTTTCCAGAGAACTGCCCGCCAGGAGGGGCGGAGACGGTGGTTCTATATACGACGTCTTTGAGAGGCGTACGGCGGACGTTCGAGGACTGTAACAGAGTGAAGTCGGTGCTGGAGTTGCAGCAGGTGGTCGTCGACGAGCGTGACGTGGCGTTGCACGGCGAGTTTTTGAAGGAGCTCAAGGAGTTGCTCGGAGACGATGCGACGGTGCCGAGGATGTTTGTGAAGGGAAGGTAATTGTTAAATCACCATTAATTTTTTTTAACTGTATATATTTTAGAGTTAAAATTATTTAATTTTGTTGCTTGCTATGTTTAATTATGGTTCTCTTTTTCAAGGATGATAAGTTTACTTCACATAATCTTTGGCTTGGTTGGGTAAAAATTATGGCCAAATTTGATAATAATTTAGTTTTTTATTTTTAATTTTAAAAAATTTAAGTAGATAAACATCTCTTCTATCTCTAATAAATTTATTACTACGATGATGTCTACTTTTTACCTGGCTTTCCAAAATCTTAACTAAAAAAATAGTTTTTAGGATTGTTATTATTTTTTTTGAATTTGACCAAGAATTCAACTTTTTTTACCTGAGAAATATGCCAACTAGAGTAAAAAATAGGCTTAATTCAAACATGGCAGGATTTTTATTAGTGCTTTAATACTACGTTTAATCATGAACTAAACTCGAAAGTTTAAACCGATGGATAAGATAAATTTAATTATTTTTAACAGGTATATCGGAGGGGTAGATGAGGTGGTGGGACTAAACGAGATGGGGAAGCTTCGAAGGATACTACGACGAGCAGCAGTGGAGATCGGAGCCGGGCATCAGGTGTGCGAAGGGTGCGGCGGAGCGAGATTTGTGCCATGTTTGGAGTGTGGAGGGAGCTGTAAAGTGA

mRNA sequence

GATAAAATATAGAAAAATAACACATTTAGCCAAATAATAAACATAATCTTATTGACATGTAAATAAGTGTTAATATGTTAATTAATGTAAGAAAGTAGCAAGAAAAAAAGTTCAAAAACAAATTTATATTTTAAACACAAACTTTTTAATGCTATCACAAATTAATAAATTTTTTAGATTTAATAACTCAAACCCAACATTGTCTATTGATTGAGAGATGGGGGAACTTTGTAAGCCACCCACCAAAACTGCCAAATAAAACACTAATTCCCAATCTTGCCAACGTGGCAAACACCCACTAAACCCACGTGTCCACTCATACACCACTTCTCATCCTGAGGCGTCGTACAGAATTACACAAAAACTTCAAAATCCGATAAGCTTCATTCTTTCCGATTTCCACCACACAAAAAATCCCTAATTGGCCCCTTCCAATTTCCCACCACATTTCCAATTCCACCCTTCTATAAACTATAAACCCAACACCCAAAAACCCATAAAAGTAATTTTGAAAAAACTTTCTATAAAAAAAAAACAAAAACAAAAAAAAAAATCCCTATACCCCGCCGCCGGAAAGTTCATCGACGGCAATGGGGTGCTCCTCTTCGAAGAGAATCGAGGCCACTGTTGACGTGTACCGTCCGGCGCCGGCGAGCTTTGCGGTGTTTGACATAAACGCCATAGAGGAGCCTTGGGTTAAAGTCATGGAGGAGCTACCGCCACCACCCGCGGCGGATCCGGTGAAGGAGGAGAAATCGGCGATTGTTCCGGTTCCGATTCTGGAGAAGCTCAGTAGTTTCGAGTCTGAAGCTCCTCATTCGTGGGATGAGGTCAGTAAAGCCCTTGAAGACCTCAAACCTGCTCTCCGCCCTGTTACAGAACCAACGCCGACGAAAGCCCCTGCCGCCGTGGTTGCTAAACAACCCCCACGTAAGAGCTCGAGTTTCCACACAGTGGCAGAGCTCGACGCCAAGTTGTCGCCCTCCGCCAAGCCGGCCGCCGAGTCTAAGCCTTCTGGGTTGAGAAAAGCAGCGTCTGTTAGACCTGGACCGGAAAAACCCGAGCCAAGAACCGGAGACCCAGACCGGTTCAAGTCAGTTAAAGAGAACATATTTCTAGTGAGGGACAGAGAGGAGAGAGAAAGAGAGGGGCAGAAACCGGTCCGGTTCGACCCGCTGAGTGAGTTTCCAGAGAACTGCCCGCCAGGAGGGGCGGAGACGGTGGTTCTATATACGACGTCTTTGAGAGGCGTACGGCGGACGTTCGAGGACTGTAACAGAGTGAAGTCGGTGCTGGAGTTGCAGCAGGTGGTCGTCGACGAGCGTGACGTGGCGTTGCACGGCGAGTTTTTGAAGGAGCTCAAGGAGTTGCTCGGAGACGATGCGACGGTGCCGAGGATGTTTGTGAAGGGAAGCTTCGAAGGATACTACGACGAGCAGCAGTGGAGATCGGAGCCGGGCATCAGGTGTGCGAAGGGTGCGGCGGAGCGAGATTTGTGCCATGTTTGGAGTGTGGAGGGAGCTGTAAAGTGA

Coding sequence (CDS)

ATGGGGTGCTCCTCTTCGAAGAGAATCGAGGCCACTGTTGACGTGTACCGTCCGGCGCCGGCGAGCTTTGCGGTGTTTGACATAAACGCCATAGAGGAGCCTTGGGTTAAAGTCATGGAGGAGCTACCGCCACCACCCGCGGCGGATCCGGTGAAGGAGGAGAAATCGGCGATTGTTCCGGTTCCGATTCTGGAGAAGCTCAGTAGTTTCGAGTCTGAAGCTCCTCATTCGTGGGATGAGGTCAGTAAAGCCCTTGAAGACCTCAAACCTGCTCTCCGCCCTGTTACAGAACCAACGCCGACGAAAGCCCCTGCCGCCGTGGTTGCTAAACAACCCCCACGTAAGAGCTCGAGTTTCCACACAGTGGCAGAGCTCGACGCCAAGTTGTCGCCCTCCGCCAAGCCGGCCGCCGAGTCTAAGCCTTCTGGGTTGAGAAAAGCAGCGTCTGTTAGACCTGGACCGGAAAAACCCGAGCCAAGAACCGGAGACCCAGACCGGTTCAAGTCAGTTAAAGAGAACATATTTCTAGTGAGGGACAGAGAGGAGAGAGAAAGAGAGGGGCAGAAACCGGTCCGGTTCGACCCGCTGAGTGAGTTTCCAGAGAACTGCCCGCCAGGAGGGGCGGAGACGGTGGTTCTATATACGACGTCTTTGAGAGGCGTACGGCGGACGTTCGAGGACTGTAACAGAGTGAAGTCGGTGCTGGAGTTGCAGCAGGTGGTCGTCGACGAGCGTGACGTGGCGTTGCACGGCGAGTTTTTGAAGGAGCTCAAGGAGTTGCTCGGAGACGATGCGACGGTGCCGAGGATGTTTGTGAAGGGAAGCTTCGAAGGATACTACGACGAGCAGCAGTGGAGATCGGAGCCGGGCATCAGGTGTGCGAAGGGTGCGGCGGAGCGAGATTTGTGCCATGTTTGGAGTGTGGAGGGAGCTGTAAAGTGA

Protein sequence

MGCSSSKRIEATVDVYRPAPASFAVFDINAIEEPWVKVMEELPPPPAADPVKEEKSAIVPVPILEKLSSFESEAPHSWDEVSKALEDLKPALRPVTEPTPTKAPAAVVAKQPPRKSSSFHTVAELDAKLSPSAKPAAESKPSGLRKAASVRPGPEKPEPRTGDPDRFKSVKENIFLVRDREEREREGQKPVRFDPLSEFPENCPPGGAETVVLYTTSLRGVRRTFEDCNRVKSVLELQQVVVDERDVALHGEFLKELKELLGDDATVPRMFVKGSFEGYYDEQQWRSEPGIRCAKGAAERDLCHVWSVEGAVK

Homology

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BLAST of Lsi09G001600 vs. Swiss-Prot
Match: Y5986_ARATH (Uncharacterized protein At5g39865 OS=Arabidopsis thaliana GN=At5g39865 PE=2 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 1.3e-11
Identity = 50/141 (35.46%), Postives = 72/141 (51.06%), Query Frame = 1


Query: 177 VRDREEREREGQKPVRFD-PLSEFPENC----------PPG----------GAETVVLYT 236
           VR +   + +    V FD P S F EN           PP           G E VVLY 
Sbjct: 172 VRIQPSHDHDHDVAVSFDLPKSRFHENVKSSCRVDDLDPPDIVSRFKRKTLGKERVVLYF 231

Query: 237 TSLRGVRRTFEDCNRVKSVLELQQVVVDERDVALHGEFLKELKELL------GDDATVPR 291
           TSLRG+R+T+EDC  ++ +L+   + +DERDV++H  F  ELK+LL      G   T+PR
Sbjct: 232 TSLRGIRKTYEDCCNIRIILKSLGIRIDERDVSMHSGFKDELKKLLEGKFNNGVGITLPR 291

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BLAST of Lsi09G001600 vs. Swiss-Prot
Match: Y3885_ARATH (Uncharacterized protein At3g28850 OS=Arabidopsis thaliana GN=At3g28850 PE=3 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.5e-07
Identity = 65/234 (27.78%), Postives = 108/234 (46.15%), Query Frame = 1


Query: 80  EVSKALEDLKPALRPVTEPTPTKAPAAVVAKQP--PRKSSSFHTVAELDAKLSPSAKP-- 139
           E+   L + K     + E  P   P   +   P  P   +++  +  L+  LSP   P  
Sbjct: 105 ELQAKLMEAKVWSSMMNEKIPKIVPKTPIVTPPGEPETINTWEMMDGLEDVLSPLRSPNH 164

Query: 140 ----AAESKPSGLRKAASVRP-GPEKPEPRTG----DPDRFKSVKENIFLVRDREE---R 199
               + +  P+G +   SV+P   +  E   G    DP+   S ++++  +         
Sbjct: 165 VKSFSFDVGPNGGKSNGSVKPVWLQMEEEEEGFEDFDPEIISSFRKSLQELPSDHPFHIS 224

Query: 200 EREGQKPVRFDPLSEFPENCPPG-GAETVVLYTTSLRGVRRTFEDCNRVKSVLELQQVVV 259
             + +   RF+   E  E      G E V+LY TSLRG+R+T+E+   V+ +L+   + V
Sbjct: 225 NHDFELKPRFNFSDEEKEEEEQSVGKERVILYFTSLRGIRKTYEESCDVRVILKSLGIRV 284

Query: 260 DERDVALHGEFLKELKELLGD------DATVPRMFVKGSFEGYYDEQQWRSEPG 291
           DERDV++H  F  ELKELLG+        T+PR+F+   + G  +E +  +E G
Sbjct: 285 DERDVSMHSGFKDELKELLGEKFNKGVGITLPRVFLGRKYIGGAEEIRKLNEDG 338

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BLAST of Lsi09G001600 vs. Swiss-Prot
Match: GRCR1_HUMAN (Glutaredoxin domain-containing cysteine-rich protein 1 OS=Homo sapiens GN=GRXCR1 PE=1 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 5.6e-07
Identity = 28/73 (38.36%), Postives = 47/73 (64.38%), Query Frame = 1


Query: 209 ETVVLYTTSLRGVRRTFEDCNRVKSVLELQQVVVDERDVALHGEFLKELKE---LLGDDA 268
           + VV+YTT LR VR TFE C  V+ + +  +V  +E+++AL+GE+ KEL E    + +  
Sbjct: 137 DRVVIYTTCLRVVRTTFERCELVRKIFQNHRVKFEEKNIALNGEYGKELDERCRRVSEAP 196

Query: 269 TVPRMFVKGSFEG 279
           ++P +F+ G + G
Sbjct: 197 SLPVVFIDGHYLG 209

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BLAST of Lsi09G001600 vs. Swiss-Prot
Match: GRCR1_MOUSE (Glutaredoxin domain-containing cysteine-rich protein 1 OS=Mus musculus GN=Grxcr1 PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.2e-06
Identity = 27/73 (36.99%), Postives = 47/73 (64.38%), Query Frame = 1


Query: 209 ETVVLYTTSLRGVRRTFEDCNRVKSVLELQQVVVDERDVALHGEFLKELKE---LLGDDA 268
           + VV+YTT LR VR TFE C  V+ + +  +V  +E+++AL+G++ KEL E    + +  
Sbjct: 137 DRVVIYTTCLRVVRTTFERCELVRKIFQNHRVKFEEKNIALNGDYGKELDERCRRVSEAP 196

Query: 269 TVPRMFVKGSFEG 279
           ++P +F+ G + G
Sbjct: 197 SLPVVFIDGHYLG 209

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BLAST of Lsi09G001600 vs. Swiss-Prot
Match: GRCR2_DROME (Glutaredoxin domain-containing cysteine-rich protein CG12206 OS=Drosophila melanogaster GN=CG12206 PE=2 SV=2)

HSP 1 Score: 53.5 bits (127), Expect = 4.7e-06
Identity = 26/69 (37.68%), Postives = 43/69 (62.32%), Query Frame = 1


Query: 211 VVLYTTSLRGVRRTFEDCNRVKSVLELQQVVVDERDVALHGEFLKELKELLGDDA-TVPR 270
           VVLYTTS+  +R T+  C  VK +L    +  +ERD+ +  E+ +E++E + D+   VP+
Sbjct: 435 VVLYTTSMGIIRDTYAKCANVKKILRTLLIKFEERDIFMSVEYQQEMRERMQDETIRVPQ 494

Query: 271 MFVKGSFEG 279
           +FV+G   G
Sbjct: 495 LFVEGQLIG 503

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BLAST of Lsi09G001600 vs. TrEMBL
Match: A0A0A0KQR0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G148770 PE=4 SV=1)

HSP 1 Score: 493.0 bits (1268), Expect = 2.6e-136
Identity = 259/297 (87.21%), Postives = 267/297 (89.90%), Query Frame = 1


Query: 1   MGCSSSKRIEATVDVYRPAPASFAVFDINAIEEPWVKVMEELPPPPAADPVKEEKSAIVP 60
           MGC+SSKRIEATVDVYRPAPASFAVFDINAIEEPWVKVMEELPPPP   PVKEEKSAIVP
Sbjct: 1   MGCTSSKRIEATVDVYRPAPASFAVFDINAIEEPWVKVMEELPPPPEEPPVKEEKSAIVP 60

Query: 61  VPILEKLSSFESEAPHSWDEVSKALEDLKPALRPVTEPTPTK-------APAAVVAKQPP 120
           VPILEKLSSFESEAPHSWDEVSKALEDLKPALR VTEP PT         PA VVAKQPP
Sbjct: 61  VPILEKLSSFESEAPHSWDEVSKALEDLKPALRSVTEPPPTNPLAVTAATPAVVVAKQPP 120

Query: 121 RKSSSFHTVAELDAKLSPSAKPAAESKPSGLRKAASVRPGPEKPEPRTGDPDRFKSVKEN 180
           RKSSSFHTVAELDAKLSPS+KP AESK +GLRK A+ RPGPEKPE RTGDPDRFKSVKEN
Sbjct: 121 RKSSSFHTVAELDAKLSPSSKPTAESKTAGLRKTATFRPGPEKPEQRTGDPDRFKSVKEN 180

Query: 181 IFLVRDREEREREGQKPVRFDPLSEFPENCPPGGAETVVLYTTSLRGVRRTFEDCNRVKS 240
           IFLVRDREEREREGQKPVRFDPLSEFPE CPPGGAETVVLYTTSLRGVRRTFEDCNRVKS
Sbjct: 181 IFLVRDREEREREGQKPVRFDPLSEFPEKCPPGGAETVVLYTTSLRGVRRTFEDCNRVKS 240

Query: 241 VLELQQVVVDERDVALHGEFLKELKELLGDDATVPRMFVKGSFEGYYDEQQWRSEPG 291
           VLELQQVVVDERDVALHGEFLKELKELLGD+ATVP+MFVKG + G  DE    +E G
Sbjct: 241 VLELQQVVVDERDVALHGEFLKELKELLGDEATVPKMFVKGRYIGGADEVVALNEMG 297

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BLAST of Lsi09G001600 vs. TrEMBL
Match: F6HU33_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0025g01710 PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 4.8e-74
Identity = 175/328 (53.35%), Postives = 215/328 (65.55%), Query Frame = 1


Query: 1   MGCSSSKRIEATVDVYRPAPASFAVFDINAIEEPWVKVMEELPPPPAADPVKEEKSAIVP 60
           MGCSSSKRIEATVDVYRPAPASFAVFDIN IEEPW+KV         A    +EK   +P
Sbjct: 1   MGCSSSKRIEATVDVYRPAPASFAVFDINTIEEPWLKVDH-------APEHHQEKPTHLP 60

Query: 61  VPILEKLSSFESEAPHSWDEVSKALEDLKPALR------------PVTEPTPTKAPAAVV 120
             ILEKL++ E E P SWDEVS+ALEDLKP L             P  +P P    +  +
Sbjct: 61  PLILEKLNALE-EGPRSWDEVSRALEDLKPTLHSPAPAVTDADKPPQPQPQPPAQDSPTL 120

Query: 121 AKQPPRKSSSFHTVAELDAKLSPSAKPAAESKPSGLRKAASVRPGPEKPEPRTGDPDR-- 180
             Q  RKS SFHTVAELD KLS  +KP  ES  + L+K  S+R   +KPE R     +  
Sbjct: 121 KPQATRKSLSFHTVAELDTKLS--SKPT-ESTRTELKKTESIRINSKKPESRDAAAAKVA 180

Query: 181 --------FKSVKENIFLVRDREEREREGQKP------VRFDPLSEFPENCPPGGAETVV 240
                    + VK+N+F++RDR EREREG+         R DPLSE+PE CPPGGA+++V
Sbjct: 181 PAVVVSEGMRPVKDNMFILRDRLEREREGKSANFDKMMSRRDPLSEYPEKCPPGGADSLV 240

Query: 241 LYTTSLRGVRRTFEDCNRVKSVLELQQVVVDERDVALHGEFLKELKELLGDDATVPRMFV 296
           LYTTSL GVRRT+EDCNR++SVLE  +VV DERDV+LHGEFLKEL+ELLG++++VPR+FV
Sbjct: 241 LYTTSLGGVRRTYEDCNRLRSVLESHRVVFDERDVSLHGEFLKELRELLGEESSVPRLFV 300

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BLAST of Lsi09G001600 vs. TrEMBL
Match: B9GXS3_POPTR (Glutaredoxin family protein OS=Populus trichocarpa GN=POPTR_0003s14170g PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 1.8e-73
Identity = 167/312 (53.53%), Postives = 210/312 (67.31%), Query Frame = 1


Query: 1   MGCSSSKRIEATVDVYRPAPASFAVFDINAIEEPWVKVMEELPPPPAADPVKEEKSAIVP 60
           MGC+SSKRIEA VDVYRP P+SFAVFDIN+I+EPW+ V    P          EK++ VP
Sbjct: 1   MGCNSSKRIEANVDVYRPPPSSFAVFDINSIQEPWLVVDNSAP----------EKTSSVP 60

Query: 61  VPILEKLSSFESEAPHSWDEVSKALEDLKPALR---PVTEPTPTKAP---AAVVAK---- 120
            PILEKL+ FE++AP SWDEVSKAL+DLKP L    P+  P+P + P    A VAK    
Sbjct: 61  APILEKLNKFETDAPRSWDEVSKALQDLKPTLNNKTPIATPSPPQKPDTTPAQVAKTNQE 120

Query: 121 ---QPPRKSSSFHTVAELDAKLSPSAKPAAE-SKPSGLRKAASVRPGPEKPEPRTG---- 180
              +P RKS SFHT+ EL+AK++P  KP  E  K   +R  +       K E R G    
Sbjct: 121 KKQEPIRKSVSFHTLEELEAKIAP--KPEKELKKTESVRTLSRKVEVVNKTESRVGTEPV 180

Query: 181 -DPDR---FKSVKENIFLVRDREEREREGQKPVRFDPLSEFPENCPPGGAETVVLYTTSL 240
            +P      +SVKENIF+VRDR ER +EG+   +FDPLS F E CPPGGA++VVLYTTSL
Sbjct: 181 TEPSGGGVIRSVKENIFIVRDRLERGKEGKPLKKFDPLSGFEEKCPPGGADSVVLYTTSL 240

Query: 241 RGVRRTFEDCNRVKSVLELQQVVVDERDVALHGEFLKELKELLGDDATVPRMFVKGSFEG 291
           RG+RRTF+DC RVK++ EL  VV DERDV+LHGEFL EL++L+G+  +VPR+F+KG + G
Sbjct: 241 RGIRRTFDDCTRVKTLFELHHVVFDERDVSLHGEFLNELRDLVGEGTSVPRVFIKGRYIG 300

[Close]

BLAST of Lsi09G001600 vs. TrEMBL
Match: A5B3J3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032100 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 2.4e-73
Identity = 175/329 (53.19%), Postives = 214/329 (65.05%), Query Frame = 1


Query: 1   MGCSSSKRIEATVDVYRPAPASFAVFDINAIEEPWVKVMEELPPPPAADPVKEEKSAIVP 60
           MGCSSSKRIEATVDVYRPAPASFAVFDIN IEEPW+KV         A    +EK   +P
Sbjct: 1   MGCSSSKRIEATVDVYRPAPASFAVFDINTIEEPWLKVDH-------APEHHQEKPTHLP 60

Query: 61  VPILEKLSSFESEAPHSWDEVSKALEDLKPALR------------PVTEPTPTKAPAAVV 120
             ILEKL++ E E P SWDEVS+ALEDLKP L             P  +P P    +  +
Sbjct: 61  PLILEKLNALE-EGPRSWDEVSRALEDLKPTLHSPAPAVTDADKPPQPQPQPPAQDSPTL 120

Query: 121 AKQPPRKSSSFHTVAELDAKLSPSAKPAAESKPSGLRKAASVRPGPEKPE---------- 180
             Q  RKS SFHTVAELD KLS  +KP  ES  + L+K  S+R   +KPE          
Sbjct: 121 KPQATRKSLSFHTVAELDTKLS--SKPT-ESTRTELKKTESMRINSKKPESKRDAAAAKV 180

Query: 181 -PRTGDPDRFKSVKENIFLVRDREEREREGQKP------VRFDPLSEFPENCPPGGAETV 240
            P     +  + VK+N+F++RDR EREREG+         R DPLSE+PE CPPGGA+++
Sbjct: 181 APAVVVSEGMRPVKDNMFILRDRLEREREGKSANFDKMMSRRDPLSEYPEKCPPGGADSL 240

Query: 241 VLYTTSLRGVRRTFEDCNRVKSVLELQQVVVDERDVALHGEFLKELKELLGDDATVPRMF 296
           VLYTTSL GVRRT+EDCNR++SVLE  +VV DERDV+LHGEFLKEL+ELLG++ +VPR+F
Sbjct: 241 VLYTTSLGGVRRTYEDCNRLRSVLESHRVVFDERDVSLHGEFLKELRELLGEEXSVPRLF 300

[Close]

BLAST of Lsi09G001600 vs. TrEMBL
Match: A0A068UUK6_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00035586001 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 2.4e-73
Identity = 173/334 (51.80%), Postives = 213/334 (63.77%), Query Frame = 1


Query: 1   MGCSSSKRIEATVDVYRPAPASFAVFDINAIEEPWVKVMEELPPPPAAD-PVKEEKSA-I 60
           MGCSSSKRIEA +DVYRP P SFAVFDINAIEEPW+K +E       +D P ++EK A  
Sbjct: 1   MGCSSSKRIEAAIDVYRPPPTSFAVFDINAIEEPWMKALEAHQQQQQSDHPDEKEKPAHA 60

Query: 61  VPVPILEKLSSFESEAPHSWDEVSKALEDLKPALRPVTEPTPTK---------------- 120
           VP P+LEKL++ E +AP SWDEVSK L DLKP L   + P PT                 
Sbjct: 61  VPPPLLEKLNAIE-DAPRSWDEVSKVLNDLKPTLHNNSTPPPTHPKPILLLAAPKTPLLR 120

Query: 121 -------APAAVVAKQPPRKSSSFHTVAELDAKLSPSAKPAAESKPSGLRK--AASVRPG 180
                  APA    +  PRKS SFHT+ ELDAKLS  +KPAA+      +K  A + +P 
Sbjct: 121 SPSPPAPAPAPNEKENAPRKSFSFHTLEELDAKLSSKSKPAADDDQLMPKKTSAPATKPA 180

Query: 181 ---------------PEKPEPRTGDPDRFKSVKENIFLVRDREEREREGQKP--VRFDPL 240
                          P KPE   G    +K VKENIF++RD+ ERE+EG+ P   RF+PL
Sbjct: 181 VELKKRESGKHQSSEPAKPEAPAGYD--YKPVKENIFILRDKLEREKEGKVPNIARFNPL 240

Query: 241 SEFPENCPPGGAETVVLYTTSLRGVRRTFEDCNRVKSVLELQQVVVDERDVALHGEFLKE 291
           ++FPE CPPGG E+VV+YTTSL GVRRTFEDCN+V+ ++E  + V DERDV+LHGEFLKE
Sbjct: 241 NDFPEMCPPGGEESVVIYTTSLGGVRRTFEDCNKVRLIMESHRFVFDERDVSLHGEFLKE 300

[Close]

BLAST of Lsi09G001600 vs. TAIR10
Match: AT1G64500.1 (AT1G64500.1 Glutaredoxin family protein)

HSP 1 Score: 212.2 bits (539), Expect = 4.5e-55
Identity = 144/308 (46.75%), Postives = 192/308 (62.34%), Query Frame = 1


Query: 1   MGCSSSKRIEATV--DVYRPAPASFAVFDINAIEEPWVKVMEELPPPPAADPVKEEKSAI 60
           MGC+SSK+ +A V  DVY+P P+SFAVFD+NAI+EPW+K   E       D  K  +S +
Sbjct: 1   MGCTSSKQAKANVVADVYKPPPSSFAVFDVNAIQEPWLKFEHE-------DDEKPPRSTV 60

Query: 61  VPVPILEKLSSFESE-------APHSWDEVSKALED-LKPALRPVTEPTPTKAPAAVVAK 120
                 ++L   + +       AP +W+EVSK+LE  LKPA     E    K PA    +
Sbjct: 61  -----FDRLDEDDDDDDDDGDDAPKTWEEVSKSLETKLKPAAVKPPEVDSVKPPATP-PR 120

Query: 121 QPPRKSSSFHTVAELD--AKLSPSAK-PAAESKPSGLRKAASVRP-GPEKPEPRTGDPDR 180
           + PRKS+SFHT+ EL+  AK S +A+ P    K       + +RP   ++ E        
Sbjct: 121 RLPRKSASFHTLDELEVRAKRSIAAQIPTTMVKLKRTESMSKLRPESDDRTESTQSSYSG 180

Query: 181 FKSVKENIFLVRDREEREREG-QKPV-RFDPLSEFPENCPPGGAETVVLYTTSLRGVRRT 240
            +SVKENIF+ RDRE RE+EG +KPV  +DPL EFPE CPPGG E +++YTTSL+GVRRT
Sbjct: 181 PRSVKENIFVKRDRERREKEGNKKPVMNWDPLREFPEKCPPGGGEGLIVYTTSLQGVRRT 240

Query: 241 FEDCNRVKSVLELQQVVVDERDVALHGEFLKELKELLGDDATV--PRMFVKGSFEGYYDE 291
           +EDC RV++++E Q VVVDERDV+L    L ELKELL D+A+V  PR+FVKG + G   E
Sbjct: 241 YEDCMRVRAIMEQQGVVVDERDVSLDAGVLSELKELLQDEASVAPPRVFVKGRYLGGAAE 295

[Close]

BLAST of Lsi09G001600 vs. TAIR10
Match: AT5G06470.1 (AT5G06470.1 Glutaredoxin family protein)

HSP 1 Score: 100.5 bits (249), Expect = 1.9e-21
Identity = 53/121 (43.80%), Postives = 74/121 (61.16%), Query Frame = 1


Query: 170 VKENIFLVRDREEREREGQKPVRFDPLSEFPENCPPGGAETVVLYTTSLRGVRRTFEDCN 229
           V   +  + D EE   E ++ +    L EF ENCPPGG ++VV YTT LR VR+TFE C 
Sbjct: 54  VTPTLLELEDAEEHNLEEERGI----LLEFKENCPPGGEDSVVFYTTGLRSVRKTFEACR 113

Query: 230 RVKSVLELQQVVVDERDVALHGEFLKELKELLGDDATVPRMFVKGSFEGYYDEQQWRSEP 289
           RV+ +LE  QV+  ERDV++  EF +E+  LLG   T PR+F++G + G  +E    +E 
Sbjct: 114 RVRFLLENHQVMYRERDVSMDSEFREEMWRLLGGKVTSPRLFIRGRYIGGAEEVVALNEN 170

Query: 290 G 291
           G
Sbjct: 174 G 170

[Close]

BLAST of Lsi09G001600 vs. TAIR10
Match: AT5G03870.1 (AT5G03870.1 Glutaredoxin family protein)

HSP 1 Score: 95.5 bits (236), Expect = 6.1e-20
Identity = 52/122 (42.62%), Postives = 75/122 (61.48%), Query Frame = 1


Query: 171 KENIFLVRDREERE-REGQKPVRFDPLSEFPENCPPGGAETVVLYTTSLRGVRRTFEDCN 230
           KE I +V      E R+ +K  R   L +FPE CPPGG  +VV+Y T+LRG+R+TFEDCN
Sbjct: 200 KEQIKMVISPVVHESRKTEKTERI--LEKFPEKCPPGGEHSVVIYITTLRGIRKTFEDCN 259

Query: 231 RVKSVLELQQVVVDERDVALHGEFLKELKELLG-DDATVPRMFVKGSFEGYYDEQQWRSE 290
            V+S+L+  +V   ERDV++H  F +E++ ++G     +P +FVKG   G  +E     E
Sbjct: 260 VVRSILDSHEVRFSERDVSMHSVFKEEIRGIMGTKHVKIPAVFVKGRMVGSVEEVMRLEE 319

[Close]

BLAST of Lsi09G001600 vs. TAIR10
Match: AT5G01420.1 (AT5G01420.1 Glutaredoxin family protein)

HSP 1 Score: 91.3 bits (225), Expect = 1.2e-18
Identity = 42/83 (50.60%), Postives = 60/83 (72.29%), Query Frame = 1


Query: 194 DPLSEFPENCPPGGAETVVLYTTSLRGVRRTFEDCNRVKSVLELQQVVVDERDVALHGEF 253
           DPL EF E CPPGG E+VV YTT+LRG+R+TF+DCN ++ +L+  +V   ERDV++H E+
Sbjct: 241 DPLLEFEERCPPGGEESVVFYTTTLRGIRKTFDDCNMIRFLLDSFKVKYYERDVSMHREY 300

Query: 254 LKELKELLGDDATV--PRMFVKG 275
            +EL+ +   +  V  P +FVKG
Sbjct: 301 REELRRISAAETEVLPPVLFVKG 323

[Close]

BLAST of Lsi09G001600 vs. TAIR10
Match: AT4G10630.1 (AT4G10630.1 Glutaredoxin family protein)

HSP 1 Score: 79.7 bits (195), Expect = 3.5e-15
Identity = 64/185 (34.59%), Postives = 90/185 (48.65%), Query Frame = 1


Query: 108 VAKQPPRKSSSFHTVAELDA---KLSPSAKPAAESKPSGLRKAASVRPGPEKPEPRTGDP 167
           V K  P   +S+  ++ LD    + +P  K   + K  G     +  P    P     D 
Sbjct: 73  VIKSEPEIINSWELMSGLDGESFRFTPLPKTPVKYKVFGGENKENSDPSRRNPRKNLND- 132

Query: 168 DRFKSVKENIFLVRDREEREREGQKPVRFDPLSEFPENCPPGGAETVVLYTTSLRGVRRT 227
           +  K +  N           R+  KP+      +F   CPPGG   VV+YTTSLRGVR+T
Sbjct: 133 EVLKPLDLNREDSDSNSRSPRKSFKPLDLKLDEKFERICPPGGENRVVMYTTSLRGVRQT 192

Query: 228 FEDCNRVKSVLELQQVVVDERDVALHGEFLKELKELL----GDD---ATVPRMFVKGSFE 283
           FE CN V++ +E   VVV ERDV++   F +EL  L+    GD+   A  PR+FVKG + 
Sbjct: 193 FEACNAVRAAVESFGVVVCERDVSMDRRFREELVSLMAKRVGDEGVAALPPRVFVKGRYI 252

[Close]

BLAST of Lsi09G001600 vs. NCBI nr
Match: gi|449452408|ref|XP_004143951.1| (PREDICTED: uncharacterized protein LOC101208965 [Cucumis sativus])

HSP 1 Score: 493.0 bits (1268), Expect = 3.7e-136
Identity = 259/297 (87.21%), Postives = 267/297 (89.90%), Query Frame = 1


Query: 1   MGCSSSKRIEATVDVYRPAPASFAVFDINAIEEPWVKVMEELPPPPAADPVKEEKSAIVP 60
           MGC+SSKRIEATVDVYRPAPASFAVFDINAIEEPWVKVMEELPPPP   PVKEEKSAIVP
Sbjct: 1   MGCTSSKRIEATVDVYRPAPASFAVFDINAIEEPWVKVMEELPPPPEEPPVKEEKSAIVP 60

Query: 61  VPILEKLSSFESEAPHSWDEVSKALEDLKPALRPVTEPTPTK-------APAAVVAKQPP 120
           VPILEKLSSFESEAPHSWDEVSKALEDLKPALR VTEP PT         PA VVAKQPP
Sbjct: 61  VPILEKLSSFESEAPHSWDEVSKALEDLKPALRSVTEPPPTNPLAVTAATPAVVVAKQPP 120

Query: 121 RKSSSFHTVAELDAKLSPSAKPAAESKPSGLRKAASVRPGPEKPEPRTGDPDRFKSVKEN 180
           RKSSSFHTVAELDAKLSPS+KP AESK +GLRK A+ RPGPEKPE RTGDPDRFKSVKEN
Sbjct: 121 RKSSSFHTVAELDAKLSPSSKPTAESKTAGLRKTATFRPGPEKPEQRTGDPDRFKSVKEN 180

Query: 181 IFLVRDREEREREGQKPVRFDPLSEFPENCPPGGAETVVLYTTSLRGVRRTFEDCNRVKS 240
           IFLVRDREEREREGQKPVRFDPLSEFPE CPPGGAETVVLYTTSLRGVRRTFEDCNRVKS
Sbjct: 181 IFLVRDREEREREGQKPVRFDPLSEFPEKCPPGGAETVVLYTTSLRGVRRTFEDCNRVKS 240

Query: 241 VLELQQVVVDERDVALHGEFLKELKELLGDDATVPRMFVKGSFEGYYDEQQWRSEPG 291
           VLELQQVVVDERDVALHGEFLKELKELLGD+ATVP+MFVKG + G  DE    +E G
Sbjct: 241 VLELQQVVVDERDVALHGEFLKELKELLGDEATVPKMFVKGRYIGGADEVVALNEMG 297

[Close]

BLAST of Lsi09G001600 vs. NCBI nr
Match: gi|659074080|ref|XP_008437411.1| (PREDICTED: uncharacterized protein LOC103482835 [Cucumis melo])

HSP 1 Score: 493.0 bits (1268), Expect = 3.7e-136
Identity = 258/297 (86.87%), Postives = 268/297 (90.24%), Query Frame = 1


Query: 1   MGCSSSKRIEATVDVYRPAPASFAVFDINAIEEPWVKVMEELPPPPAADPVKEEKSAIVP 60
           MGC+SSKRIEATVDVYRPAPASFAVFDINAIEEPWVKVMEELPPPP   PVKEEKSAIVP
Sbjct: 1   MGCTSSKRIEATVDVYRPAPASFAVFDINAIEEPWVKVMEELPPPPEEPPVKEEKSAIVP 60

Query: 61  VPILEKLSSFESEAPHSWDEVSKALEDLKPALRPVTEPTPTK-------APAAVVAKQPP 120
           VPILEKLSSFESEAPHSWDEVSKALEDLKPALRPVTEP PT         PA VV KQ P
Sbjct: 61  VPILEKLSSFESEAPHSWDEVSKALEDLKPALRPVTEPPPTNPPTVAAATPAVVVTKQSP 120

Query: 121 RKSSSFHTVAELDAKLSPSAKPAAESKPSGLRKAASVRPGPEKPEPRTGDPDRFKSVKEN 180
           RKSSSFHTVAELDAKLSPS+KPAAESKP+GLRK A+ RPGPEKPE RTGDPDRFKSVK+N
Sbjct: 121 RKSSSFHTVAELDAKLSPSSKPAAESKPAGLRKTATFRPGPEKPEQRTGDPDRFKSVKDN 180

Query: 181 IFLVRDREEREREGQKPVRFDPLSEFPENCPPGGAETVVLYTTSLRGVRRTFEDCNRVKS 240
           IFLVRDREEREREGQKPVRFDPLSEFPE CPPGGAETVVLYTTSLRGVRRTFEDCNRVKS
Sbjct: 181 IFLVRDREEREREGQKPVRFDPLSEFPEMCPPGGAETVVLYTTSLRGVRRTFEDCNRVKS 240

Query: 241 VLELQQVVVDERDVALHGEFLKELKELLGDDATVPRMFVKGSFEGYYDEQQWRSEPG 291
           VLELQQVVVDERDVALHGEFLKELKELLGD+ATVP+MFVKG + G  D+    +E G
Sbjct: 241 VLELQQVVVDERDVALHGEFLKELKELLGDEATVPKMFVKGRYIGGADQVVALNEMG 297

[Close]

BLAST of Lsi09G001600 vs. NCBI nr
Match: gi|225426284|ref|XP_002266905.1| (PREDICTED: uncharacterized protein LOC100247840 [Vitis vinifera])

HSP 1 Score: 286.2 bits (731), Expect = 7.0e-74
Identity = 175/328 (53.35%), Postives = 215/328 (65.55%), Query Frame = 1


Query: 1   MGCSSSKRIEATVDVYRPAPASFAVFDINAIEEPWVKVMEELPPPPAADPVKEEKSAIVP 60
           MGCSSSKRIEATVDVYRPAPASFAVFDIN IEEPW+KV         A    +EK   +P
Sbjct: 1   MGCSSSKRIEATVDVYRPAPASFAVFDINTIEEPWLKVDH-------APEHHQEKPTHLP 60

Query: 61  VPILEKLSSFESEAPHSWDEVSKALEDLKPALR------------PVTEPTPTKAPAAVV 120
             ILEKL++ E E P SWDEVS+ALEDLKP L             P  +P P    +  +
Sbjct: 61  PLILEKLNALE-EGPRSWDEVSRALEDLKPTLHSPAPAVTDADKPPQPQPQPPAQDSPTL 120

Query: 121 AKQPPRKSSSFHTVAELDAKLSPSAKPAAESKPSGLRKAASVRPGPEKPEPRTGDPDR-- 180
             Q  RKS SFHTVAELD KLS  +KP  ES  + L+K  S+R   +KPE R     +  
Sbjct: 121 KPQATRKSLSFHTVAELDTKLS--SKPT-ESTRTELKKTESIRINSKKPESRDAAAAKVA 180

Query: 181 --------FKSVKENIFLVRDREEREREGQKP------VRFDPLSEFPENCPPGGAETVV 240
                    + VK+N+F++RDR EREREG+         R DPLSE+PE CPPGGA+++V
Sbjct: 181 PAVVVSEGMRPVKDNMFILRDRLEREREGKSANFDKMMSRRDPLSEYPEKCPPGGADSLV 240

Query: 241 LYTTSLRGVRRTFEDCNRVKSVLELQQVVVDERDVALHGEFLKELKELLGDDATVPRMFV 296
           LYTTSL GVRRT+EDCNR++SVLE  +VV DERDV+LHGEFLKEL+ELLG++++VPR+FV
Sbjct: 241 LYTTSLGGVRRTYEDCNRLRSVLESHRVVFDERDVSLHGEFLKELRELLGEESSVPRLFV 300

[Close]

BLAST of Lsi09G001600 vs. NCBI nr
Match: gi|743825286|ref|XP_011022479.1| (PREDICTED: glutaredoxin domain-containing cysteine-rich protein CG12206-like [Populus euphratica])

HSP 1 Score: 285.0 bits (728), Expect = 1.5e-73
Identity = 167/312 (53.53%), Postives = 211/312 (67.63%), Query Frame = 1


Query: 1   MGCSSSKRIEATVDVYRPAPASFAVFDINAIEEPWVKVMEELPPPPAADPVKEEKSAIVP 60
           MGC+SSKRI+A VDVYRP P+ FAVFDIN+I+EPW+ V    P          EK++ VP
Sbjct: 1   MGCNSSKRIQANVDVYRPPPSGFAVFDINSIQEPWLVVDNSAP----------EKTSSVP 60

Query: 61  VPILEKLSSFESEAPHSWDEVSKALEDLKPALR---PVTEPTPTK---APAAVVAK---- 120
            PILEKL+ FE++AP SWDEVSKAL+DLKPAL    P+  P+P +    P A VAK    
Sbjct: 61  APILEKLNKFETDAPRSWDEVSKALQDLKPALNNKTPIATPSPPQKPDTPLAQVAKTNQE 120

Query: 121 ---QPPRKSSSFHTVAELDAKLSPSAKPAAE-SKPSGLRKAASVRPGPEKPEPRTG---- 180
              +P RKS SFHT+ EL+AK++P  KP  E  K   +R  +      +K E R G    
Sbjct: 121 KKQEPVRKSVSFHTLEELEAKMAP--KPENELKKTEPIRTRSRKVEVVDKTESRVGTEPV 180

Query: 181 -DPDR---FKSVKENIFLVRDREEREREGQKPVRFDPLSEFPENCPPGGAETVVLYTTSL 240
            +P      +SVKENIF+VRDR ERE+EG+   + DPLS F E CPPGGA +VVLYTTSL
Sbjct: 181 TEPSGGGVIRSVKENIFVVRDRLEREKEGKPLKKLDPLSGFEEKCPPGGAHSVVLYTTSL 240

Query: 241 RGVRRTFEDCNRVKSVLELQQVVVDERDVALHGEFLKELKELLGDDATVPRMFVKGSFEG 291
           RG+RRTF+DC RVK++ EL  VV DERDV+LHGEFL EL++L+G+ A+VPR+F+KG + G
Sbjct: 241 RGIRRTFDDCTRVKTLFELHHVVFDERDVSLHGEFLNELRDLVGEGASVPRVFIKGRYIG 300

[Close]

BLAST of Lsi09G001600 vs. NCBI nr
Match: gi|224072222|ref|XP_002303660.1| (glutaredoxin family protein [Populus trichocarpa])

HSP 1 Score: 284.3 bits (726), Expect = 2.6e-73
Identity = 167/312 (53.53%), Postives = 210/312 (67.31%), Query Frame = 1


Query: 1   MGCSSSKRIEATVDVYRPAPASFAVFDINAIEEPWVKVMEELPPPPAADPVKEEKSAIVP 60
           MGC+SSKRIEA VDVYRP P+SFAVFDIN+I+EPW+ V    P          EK++ VP
Sbjct: 1   MGCNSSKRIEANVDVYRPPPSSFAVFDINSIQEPWLVVDNSAP----------EKTSSVP 60

Query: 61  VPILEKLSSFESEAPHSWDEVSKALEDLKPALR---PVTEPTPTKAP---AAVVAK---- 120
            PILEKL+ FE++AP SWDEVSKAL+DLKP L    P+  P+P + P    A VAK    
Sbjct: 61  APILEKLNKFETDAPRSWDEVSKALQDLKPTLNNKTPIATPSPPQKPDTTPAQVAKTNQE 120

Query: 121 ---QPPRKSSSFHTVAELDAKLSPSAKPAAE-SKPSGLRKAASVRPGPEKPEPRTG---- 180
              +P RKS SFHT+ EL+AK++P  KP  E  K   +R  +       K E R G    
Sbjct: 121 KKQEPIRKSVSFHTLEELEAKIAP--KPEKELKKTESVRTLSRKVEVVNKTESRVGTEPV 180

Query: 181 -DPDR---FKSVKENIFLVRDREEREREGQKPVRFDPLSEFPENCPPGGAETVVLYTTSL 240
            +P      +SVKENIF+VRDR ER +EG+   +FDPLS F E CPPGGA++VVLYTTSL
Sbjct: 181 TEPSGGGVIRSVKENIFIVRDRLERGKEGKPLKKFDPLSGFEEKCPPGGADSVVLYTTSL 240

Query: 241 RGVRRTFEDCNRVKSVLELQQVVVDERDVALHGEFLKELKELLGDDATVPRMFVKGSFEG 291
           RG+RRTF+DC RVK++ EL  VV DERDV+LHGEFL EL++L+G+  +VPR+F+KG + G
Sbjct: 241 RGIRRTFDDCTRVKTLFELHHVVFDERDVSLHGEFLNELRDLVGEGTSVPRVFIKGRYIG 300

The following BLAST results are available for this feature:

BLAST of Lsi09G001600 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y5986_ARATH	1.3e-11	35.46	Uncharacterized protein At5g39865 OS=Arabidopsis thaliana GN=At5g39865 PE=2 SV=1	[more]
Y3885_ARATH	2.5e-07	27.78	Uncharacterized protein At3g28850 OS=Arabidopsis thaliana GN=At3g28850 PE=3 SV=1	[more]
GRCR1_HUMAN	5.6e-07	38.36	Glutaredoxin domain-containing cysteine-rich protein 1 OS=Homo sapiens GN=GRXCR1...	[more]
GRCR1_MOUSE	1.2e-06	36.99	Glutaredoxin domain-containing cysteine-rich protein 1 OS=Mus musculus GN=Grxcr1...	[more]
GRCR2_DROME	4.7e-06	37.68	Glutaredoxin domain-containing cysteine-rich protein CG12206 OS=Drosophila melan...	[more]

BLAST of Lsi09G001600 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQR0_CUCSA	2.6e-136	87.21	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G148770 PE=4 SV=1	[more]
F6HU33_VITVI	4.8e-74	53.35	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0025g01710 PE=4 SV=...	[more]
B9GXS3_POPTR	1.8e-73	53.53	Glutaredoxin family protein OS=Populus trichocarpa GN=POPTR_0003s14170g PE=4 SV=...	[more]
A5B3J3_VITVI	2.4e-73	53.19	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032100 PE=4 SV=1	[more]
A0A068UUK6_COFCA	2.4e-73	51.80	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00035586001 PE=4 SV=1	[more]

BLAST of Lsi09G001600 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G64500.1	4.5e-55	46.75	Glutaredoxin family protein	[more]
AT5G06470.1	1.9e-21	43.80	Glutaredoxin family protein	[more]
AT5G03870.1	6.1e-20	42.62	Glutaredoxin family protein	[more]
AT5G01420.1	1.2e-18	50.60	Glutaredoxin family protein	[more]
AT4G10630.1	3.5e-15	34.59	Glutaredoxin family protein	[more]

BLAST of Lsi09G001600 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449452408\|ref\|XP_004143951.1\|	3.7e-136	87.21	PREDICTED: uncharacterized protein LOC101208965 [Cucumis sativus]	[more]
gi\|659074080\|ref\|XP_008437411.1\|	3.7e-136	86.87	PREDICTED: uncharacterized protein LOC103482835 [Cucumis melo]	[more]
gi\|225426284\|ref\|XP_002266905.1\|	7.0e-74	53.35	PREDICTED: uncharacterized protein LOC100247840 [Vitis vinifera]	[more]
gi\|743825286\|ref\|XP_011022479.1\|	1.5e-73	53.53	PREDICTED: glutaredoxin domain-containing cysteine-rich protein CG12206-like [Po...	[more]
gi\|224072222\|ref\|XP_002303660.1\|	2.6e-73	53.53	glutaredoxin family protein [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0045454	cell redox homeostasis

Vocabulary: **Molecular Function**
Term	Definition
GO:0015035	protein disulfide oxidoreductase activity
GO:0009055	electron carrier activity

Vocabulary: **INTERPRO**
Term	Definition
IPR012336	Thioredoxin-like_fold
IPR002109	Glutaredoxin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005623	cell
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0009055	electron carrier activity
molecular_function	GO:0015035	protein disulfide oxidoreductase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G001600.1	Lsi09G001600.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 211..276 score: 3.0
IPR002109	Glutaredoxin	PROFILE	PS51354	GLUTAREDOXIN_2	coord: 199..304 score: 11
IPR012336	Thioredoxin-like fold	GENE3D	G3DSA:3.40.30.10		coord: 210..282 score: 8.6
IPR012336	Thioredoxin-like fold	unknown	SSF52833	Thioredoxin-like	coord: 204..282 score: 3.1
None	No IPR available	PANTHER	PTHR10168	GLUTAREDOXIN	coord: 2..152 score: 1.1E-78coord: 208..274 score: 1.1
None	No IPR available	PANTHER	PTHR10168:SF61	F1N19.7	coord: 2..152 score: 1.1E-78coord: 208..274 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi09G001600	Csa5G148770	Cucumber (Chinese Long) v2	culsiB322
Lsi09G001600	CSPI05G04520	Wild cucumber (PI 183967)	cpilsiB322
Lsi09G001600	Cucsa.304020	Cucumber (Gy14) v1	cgylsiB487
Lsi09G001600	CmaCh02G009240	Cucurbita maxima (Rimu)	cmalsiB535
Lsi09G001600	CmoCh02G009310	Cucurbita moschata (Rifu)	cmolsiB521
Lsi09G001600	Cla011355	Watermelon (97103) v1	lsiwmB027
Lsi09G001600	MELO3C005763	Melon (DHL92) v3.5.1	lsimeB012
Lsi09G001600	ClCG01G001750	Watermelon (Charleston Gray)	lsiwcgB008
Lsi09G001600	MELO3C005763.2	Melon (DHL92) v3.6.1	lsimedB012
Lsi09G001600	Cla97C01G001780	Watermelon (97103) v2	lsiwmbB007
Lsi09G001600	Bhi12G000113	Wax gourd	lsiwgoB008
Lsi09G001600	Carg08551	Silver-seed gourd	carlsiB646
Lsi09G001600	CsaV3_5G001890	Cucumber (Chinese Long) v3	cuclsiB345

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi09G001600	Cucurbita maxima (Rimu)	cmalsiB267
Lsi09G001600	Cucurbita moschata (Rifu)	cmolsiB255
Lsi09G001600	Cucurbita pepo (Zucchini)	cpelsiB002
Lsi09G001600	Cucurbita pepo (Zucchini)	cpelsiB578
Lsi09G001600	Cucumber (Chinese Long) v2	culsiB245
Lsi09G001600	Cucumber (Gy14) v2	cgyblsiB294
Lsi09G001600	Silver-seed gourd	carlsiB327
Lsi09G001600	Cucumber (Chinese Long) v3	cuclsiB267
Lsi09G001600	Wax gourd	lsiwgoB047