Lsi09G000890 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATGTGTGATATGCATGTAGGATGTTAGAACTTTAAATTTAAAGTGTAAAAGTTTAAATTTAAAGTGTAAATGCAGTATATCTAATTTAATGAAAAATTTATATATGTAATAAATATAATATTTAAATTTGGTTTTACTATTGTATAAACTTTTAAAAATAGTAAAATAACTTTAAAATATTATAAGTTTATATTTTTGCCTTAAAATGTTGTGTCTCATATCTCTAACTTTTTCCTTTCCAAAAAAAAATGTCTCTAACTTTTCACTCTATAAAATCAGCTCCTAATTGTTATTTCGATTTTTTTAAAAAATTTTGTTCCTGTTTTATTTATTTTGTTTCTAATAATTTATATAGGCACATTTGGTAGTTTTTTTTTTGACATTTCAATTTTTCATATAATTTTTACAATTTTTTAAGATAGAATCATGTATGTATTGACATATTTTAATATTTTTAATGTATGAATCATTACCCATACGCAAATAGATGCACAAGTTTGATGTGTAACTACCTCCATTTAAACAAACACGTCCCATTAGTGTCAATTTGTATCTATTAGACGTAGAAGACACTAACATTTGAACTATCGCGTCATATTAATGAAAGATAATATAGTTTAAATGCACTTACATTCAAATAGTTGCGCGACTACACCCATCAATAAAGAGCGCACCTTATGAAAGTGGAGGGTGGCTTCTCAATAGCTTGACTTGAAAATGAACCAACATTCCCATTGTTCTTGTTTCCTTTGTTCAAAATCGAATATGTAGAAACTTAGGGTTCACCTATTTTCAATAAGCACACACCACCTCACTACACCTAAGCATTGCATGCATTTGCATCTTGCATATAGTCCCGAAATAGGAAAACCCGGTGGGAAGTATTGGTTGCTACGGTCCAGGGAGCCGAGTCATACCATCCCCAAAACCCACCACCAGCTGCCAAGTACTCCTCTTAGGAGGGTATACCAAAGTGGGAGTGCATAGTACCGCTTGACCAGTCCTACGTCCTAGGGATGAAGGGCTGGGAGGTATATTTTATAATCCAATACTTTTCTAAAAGATTTGCTTATTAAGTATTATTAATAAATGTATTTAAAAGAAAGGTATATAGGACTTTTAAGAGATATACAATGTTGTTTTGAAATGTAAAAAATATCACATTTGATTCGATTTATATGGACTTTTTTTTAAAAAAAAAATCTCGATTTTTATGGACTTAACTGGTCCTTGCAACTTTTGATCTCAAGAAAGAAGAAGACAATGACTCTATAAGTCCATAACGAAGTAAATTTTGTATGAAAAGAAATATTTTCTTATCTACCAGACCAAGTACCAAAAGTATTAATTTGTCGTGTAGTAATAACAACGTTGAGATATTTTCAGTATTGTTGAGACACTATTTTCTCGATAATTATTGTTGGAACATTCTATTTAAAACTTTAATGCTCCAAAATACTCATCTATGTCACAATTTCTACAATTTATCTTTTGAATCATCATATTCACCTAAATTACTTAAAGTTTATGAAATTTACCAAATAAACACATAAAAGCACCGAAATTAGTCTCTAAAACAATAACTTGAGCCTAAGAATAACACATTTTAGCATGATATCAATTCTTACAAATTATTTCTATTTAAATTATTAATTCCAATAATAAGGGACAAAATTATGCAAAACATTTTTGAAAAAAATGTAATCAAATATGAGTGTTTTAGTTTGAAACAAATTTTATTTAAAAAAAAAAAAAAGTTTAAAAGAACATGCATTTCTTGAAAACATTTGTTTGAACCTACATTGTTGCATAAATTATGTGCACTTTCAAATTTTTTCACATCATCATGTCAATTTTCCCATTTACTTTAAACAAGCTTAATAAAGGTGTAGGTAGAAATTAAACTATTAATTTATTTTTTTTGTCGTTTGAGTAATCAATAATCTAGATATTTTTTACTTCATTTTTTTTTTTATTCTTGACAATATGTAGGGCGGGAGAATTAAACTTCTGACTTTGAAGTTGATATACAAACATCATGTCAATTAATCTATGTTCATTTTGACATTTTTTTACTTAATGTACTTAATTGATCCTCGTAATTGTTGAACTCAAAAATGAAGAAGACTGTTGATATTATAACTTCATAACGAAGTAGCACTTGTTTGGTGAAAATATCTTCTTATCTACCAGACCAAATACTAAAGTTGAAGAAACAAAAAATTGCTTACCCTCACAAACATATTTCAATTAAGATTGATTCTCAAAGTTGTAAAATAATAATTGCAAAATTAGTTTATAAAAATTAAGATTTGTTATAGGGGCATAATTGAAAATAAGACTTACAAAATTCAAGATTAAAAATAAAACTTGTTAATAGGGAGACATAATTAAAATTTATAATACTTGGACTTGGTATAGTATCAAAATGCTGAAGCCGTGGAAGAGAATTATCACAAAAAAAACTCGGGTCACCCGCGTGACAGGCGAGAATACTCACCACTATACTACAACGACTTTTTATTTTTTTAAGTTCAATTTGAGTTTTTAAATTTTCGTTTTGTATTTCTTTTACTCCTCAACATTCCAAAAGGTTTAGTCAAGTAATTTCAATATATAGTATTTTTTGAAGACTAAAAAAATAGCATGTAGTTGAAGGAATAAAAAGTCACTCATCGTGACAAAATCTTGTCTAATCGATCAAGATTGATTCTCAATAAATATTTGTTTAATTTATGTGGCTTAGAATCATGTTTATACGTATACTCTAAGTCACCTTTTGAAAATTAGAAAAAAAAAAAGTACTCTTTATTTTTAAAATTAAACTAAGAATTGAAAATACAACCAAAATGTGACACATAACTCAAATTGAATTGATATGATTATTACCCTTGATATTTTTAATTAATTTAGGGATAGAAATGGAATTTCCAATTGAAGTTGAGGCCCAAATAATCCGGCCCCACCTTAGTTTCGTATGGCTAAGATCCAATTTTCACGTGACAAAAGACACAAAGCTACACCACGTGTTCCTTATAGCCAACCAGAACCCGCCACGTACATACTGTCACCCGTCAATCCCTCAGAGCCTGCCACGTGCCCACTTTACCCACCACACTCCTTAAACTCCCATCTCCATTTCCTTCCTCACTTCTACTCTTCTCTTATTTTCATTCTCTGGAAAAAAAGAAAAATGTCCGGTGGGGTGGGGCCTACATGCAGTGACATAAGCCTCCCAAAAGAACAAGAGAGCCTCCACAAAGAAGCATGGGACCCAAAGCAACAGCAAGGGACCAAATTATCGGGCGGCGGCGTTGGGCGGAGGAAGACGGCGGCGTTTTTGAGTTTCCGGCAACTGAATGCGCTGGCGGTAGTGATTATATTTTCGGCCAGTGGGATGGTTTGCGCTGAAGACTTGGCGTTTGTGGTGTTTTCGATGATGTATATGTATTTCATTTCAAGAGTGGCGTTTCCGACACTGGGCGGCGCCGGAGAGCCGACGGTGTTTAGCCCGGAGAACAGGATGCTCCGCCTTTACGTGTTCTTCGCCGCCGTGGTGGGGCTGTTCCTCCCTATAGCTTACATACTTGAAGGGTTTTTTGAAGAAGATAAAGAAGGCATCAAAGCCGCTTCTCCACACGTCTTTCTTCTCGCTAGCCAGGTTCCTTTTTTACCCTTCAACTGCTTTAAATTATTATTTTTTAAAAAAAAAACAAAATTATTATTATTATTTAATTTTTTCTATGCTTCAATCAAGTCAATTCACCTCCAAGTTAGAAGTTTGATTTTGCCAAAAAAAAAAAAAGAAAAAAAAAAGATCCAAGTGCCAAGTTAAAACAAAACTCAAATTTAAGCTAAAATTGTATATATTGAAATATAGAAATTAATTTGAGGCCAAATTTAAAATTTAAAGGGTAAAAAAGTTAACATTTTGAAACTTTAGGGATGAAATAGAAATTAGATTCAAAATTTAAGGACGAGAAAATATTTTTCCCAATTAACCATCAGGGATTTGCAGTTTTTTTTTTAGTTAGGGCATGCAGATTTTGAAAGCTAGATCTAATAATAATTTTCCAAGAGATAGATGGGGATTGTTTTTTCATTAATGTTATAGAAGGTATGGGTGGCTTAAATATGGATTATGCTTAGGTTATGAAGATAAATATGGGGCTAAAATTTGGTATTAATAATTATAAAGATTGTGTTTTTTTAGTCCTTATAATGTTTTTTTCCGCCTCTTAAATGATTTAGTTATCTTTTTCCAATAAAATAAATTAGTTATCCGGAAATTATTCTTGATTAAACTATTATTATTATTATTATTATTATTTTGCAAAAGGAAACTATTTTTAATTATTTTAATTATTTAGATGTTTCTAACTTAATTGTAGCAGGGTTATATAATTTAAGTTGAGCAATGATTCCATACTCTCCAATTTTTATACACACACCAAGAAAAAAATTTTAAAATTTTTTTTTTAGAAAAACACAAAACTACCACGTAGTAGTTTTTTATTAGGCAACCCCTTAGAATGCACGTAGATAGGTGCAGCTCAAGGAGTACTCAAATATTTTTCTTTTAAATTTTGTCTGTTTTGCCAAATCGAGCGGGGTATAGCTACTCTACTGGATATATAAGTTGGGAGATTTGGATCATAGACGTTCTCTTGGCCGCTAACACATATTGTATATTTTGTTTTTTCTTATAAATCTTCCTTTTCAGAATTTTAACTCTCATTTTTCTTATTTATTAACACTACTAAATTACTATCAATTTAGAAAAATTATAAACGGAGCTTAATGTCAATTAAGTTAGGCTCATTTTGGCAGCTATATATATATATATTATGAAGTTTATGAAAATTCAAAAATGTTTTAAGACAAATCGATCAAATTTAAATTCGTAAACGAATAGATTATGCCATGCTATATATGTTGAATCTTTGTATAAATATTGTTGATAGGTTTTCATGGAAGGCGTGGCGGGGAAGGACAATTTCTCAACGCCAATCCGTGTGTTCGTGCCTGTTTTCTACAACGCGAGAAGGATCTTCACCCTCGCAGAATGGCTGCGGGACGAGTTTGCCAAGGAAGATAAGGAGTACAGCGGCTCCGTGCGGCGGTTGTTGGTCGGAAGAGTCCTTGCTGTGGCCAACATGGCGCTCTGGAGCTTCAATCTTTTTGGATTCTTATTGCCTGTGTATTTGCCAAGAGCTTTCAAGAGATATTATTCTCTCTACAAATCCAAAGATTGACAAATCTTTGTTTTTTTTTTTGGGTATGTTTGGTTCATATTGCCAACTCCCAACTTTGTTCTTCAAAATAATTATTGTGGAAGACAATTAATCTGTTTCCCCCCCCCCC ATGAATTCCCGAAATAGGAAAACCCGGTGGGAAGTATTGGTTGCTACGGTCCAGGGAGCCGAGTCATACCATCCCCAAAACCCACCACCAGCTGCCAAACACAAAGCTACACCACGTGTTCCTTATAGCCAACCAGAACCCGCCACGTACATACTGTCACCCGTCAATCCCTCAGAGCCTGCCACGTGCCCACTTTACCCACCACACTCCTTAAACTCCCATCTCCATTTCCTTCCTCACTTCTACTCTTCTCTTATTTTCATTCTCTGGAAAAAAAGAAAAATGTCCGGTGGGGTGGGGCCTACATGCAGTGACATAAGCCTCCCAAAAGAACAAGAGAGCCTCCACAAAGAAGCATGGGACCCAAAGCAACAGCAAGGGACCAAATTATCGGGCGGCGGCGTTGGGCGGAGGAAGACGGCGGCGTTTTTGAGTTTCCGGCAACTGAATGCGCTGGCGGTAGTGATTATATTTTCGGCCAGTGGGATGGTTTGCGCTGAAGACTTGGCGTTTGTGGTGTTTTCGATGATGTATATGTATTTCATTTCAAGAGTGGCGTTTCCGACACTGGGCGGCGCCGGAGAGCCGACGGTGTTTAGCCCGGAGAACAGGATGCTCCGCCTTTACGTGTTCTTCGCCGCCGTGGTGGGGCTGTTCCTCCCTATAGCTTACATACTTGAAGGGTTTTTTGAAGAAGATAAAGAAGGCATCAAAGCCGCTTCTCCACACGTCTTTCTTCTCGCTAGCCAGGTTTTCATGGAAGGCGTGGCGGGGAAGGACAATTTCTCAACGCCAATCCGTGTGTTCGTGCCTGTTTTCTACAACGCGAGAAGGATCTTCACCCTCGCAGAATGGCTGCGGGACGAGTTTGCCAAGGAAGATAAGGAGTACAGCGGCTCCGTGCGGCGGTTGTTGGTCGGAAGAGTCCTTGCTGTGGCCAACATGGCGCTCTGGAGCTTCAATCTTTTTGGATTCTTATTGCCTGTGTATTTGCCAAGAGCTTTCAAGAGATATTATTCTCTCTACAAATCCAAAGATTGACAAATCTTTGTTTTTTTTTTTGGGTATGTTTGGTTCATATTGCCAACTCCCAACTTTGTTCTTCAAAATAATTATTGTGGAAGACAATTAATCTGTTTCCCCCCCCCCC ATGAATTCCCGAAATAGGAAAACCCGGTGGGAAGTATTGGTTGCTACGGTCCAGGGAGCCGAGTCATACCATCCCCAAAACCCACCACCAGCTGCCAAACACAAAGCTACACCACGTGTTCCTTATAGCCAACCAGAACCCGCCACGTACATACTGTCACCCGTCAATCCCTCAGAGCCTGCCACGTGCCCACTTTACCCACCACACTCCTTAAACTCCCATCTCCATTTCCTTCCTCACTTCTACTCTTCTCTTATTTTCATTCTCTGGAAAAAAAGAAAAATGTCCGGTGGGGTGGGGCCTACATGCAGTGACATAAGCCTCCCAAAAGAACAAGAGAGCCTCCACAAAGAAGCATGGGACCCAAAGCAACAGCAAGGGACCAAATTATCGGGCGGCGGCGTTGGGCGGAGGAAGACGGCGGCGTTTTTGAGTTTCCGGCAACTGAATGCGCTGGCGGTAGTGATTATATTTTCGGCCAGTGGGATGGTTTGCGCTGAAGACTTGGCGTTTGTGGTGTTTTCGATGATGTATATGTATTTCATTTCAAGAGTGGCGTTTCCGACACTGGGCGGCGCCGGAGAGCCGACGGTGTTTAGCCCGGAGAACAGGATGCTCCGCCTTTACGTGTTCTTCGCCGCCGTGGTGGGGCTGTTCCTCCCTATAGCTTACATACTTGAAGGGTTTTTTGAAGAAGATAAAGAAGGCATCAAAGCCGCTTCTCCACACGTCTTTCTTCTCGCTAGCCAGGTTTTCATGGAAGGCGTGGCGGGGAAGGACAATTTCTCAACGCCAATCCGTGTGTTCGTGCCTGTTTTCTACAACGCGAGAAGGATCTTCACCCTCGCAGAATGGCTGCGGGACGAGTTTGCCAAGGAAGATAAGGAGTACAGCGGCTCCGTGCGGCGGTTGTTGGTCGGAAGAGTCCTTGCTGTGGCCAACATGGCGCTCTGGAGCTTCAATCTTTTTGGATTCTTATTGCCTGTGTATTTGCCAAGAGCTTTCAAGAGATATTATTCTCTCTACAAATCCAAAGATTGA MNSRNRKTRWEVLVATVQGAESYHPQNPPPAAKHKATPRVPYSQPEPATYILSPVNPSEPATCPLYPPHSLNSHLHFLPHFYSSLIFILWKKRKMSGGVGPTCSDISLPKEQESLHKEAWDPKQQQGTKLSGGGVGRRKTAAFLSFRQLNALAVVIIFSASGMVCAEDLAFVVFSMMYMYFISRVAFPTLGGAGEPTVFSPENRMLRLYVFFAAVVGLFLPIAYILEGFFEEDKEGIKAASPHVFLLASQVFMEGVAGKDNFSTPIRVFVPVFYNARRIFTLAEWLRDEFAKEDKEYSGSVRRLLVGRVLAVANMALWSFNLFGFLLPVYLPRAFKRYYSLYKSKD
BLAST of Lsi09G000890 vs. TrEMBL
Match: A0A0A0KK26_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G141070 PE=4 SV=1) HSP 1 Score: 435.6 bits (1119), Expect = 5.5e-119 Identity = 217/252 (86.11%), Postives = 230/252 (91.27%), Query Frame = 1
BLAST of Lsi09G000890 vs. TrEMBL
Match: M5XLW9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010353mg PE=4 SV=1) HSP 1 Score: 332.0 bits (850), Expect = 8.5e-88 Identity = 175/255 (68.63%), Postives = 202/255 (79.22%), Query Frame = 1
BLAST of Lsi09G000890 vs. TrEMBL
Match: B9IDA4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s12900g PE=4 SV=1) HSP 1 Score: 327.0 bits (837), Expect = 2.7e-86 Identity = 164/252 (65.08%), Postives = 193/252 (76.59%), Query Frame = 1
BLAST of Lsi09G000890 vs. TrEMBL
Match: B9RIW3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1583120 PE=4 SV=1) HSP 1 Score: 319.3 bits (817), Expect = 5.7e-84 Identity = 163/256 (63.67%), Postives = 198/256 (77.34%), Query Frame = 1
BLAST of Lsi09G000890 vs. TrEMBL
Match: V4S8P5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005703mg PE=4 SV=1) HSP 1 Score: 312.4 bits (799), Expect = 7.0e-82 Identity = 158/251 (62.95%), Postives = 192/251 (76.49%), Query Frame = 1
BLAST of Lsi09G000890 vs. TAIR10
Match: AT5G52420.1 (AT5G52420.1 unknown protein) HSP 1 Score: 253.8 bits (647), Expect = 1.5e-67 Identity = 127/246 (51.63%), Postives = 168/246 (68.29%), Query Frame = 1
BLAST of Lsi09G000890 vs. TAIR10
Match: AT5G23920.1 (AT5G23920.1 unknown protein) HSP 1 Score: 162.2 bits (409), Expect = 5.9e-40 Identity = 82/195 (42.05%), Postives = 123/195 (63.08%), Query Frame = 1
BLAST of Lsi09G000890 vs. TAIR10
Match: AT1G27990.1 (AT1G27990.1 unknown protein) HSP 1 Score: 143.7 bits (361), Expect = 2.2e-34 Identity = 90/250 (36.00%), Postives = 136/250 (54.40%), Query Frame = 1
BLAST of Lsi09G000890 vs. NCBI nr
Match: gi|659074271|ref|XP_008437515.1| (PREDICTED: uncharacterized protein LOC103482907 [Cucumis melo]) HSP 1 Score: 443.7 bits (1140), Expect = 2.9e-121 Identity = 223/252 (88.49%), Postives = 232/252 (92.06%), Query Frame = 1
BLAST of Lsi09G000890 vs. NCBI nr
Match: gi|449456319|ref|XP_004145897.1| (PREDICTED: uncharacterized protein LOC101214743 [Cucumis sativus]) HSP 1 Score: 435.6 bits (1119), Expect = 7.8e-119 Identity = 217/252 (86.11%), Postives = 230/252 (91.27%), Query Frame = 1
BLAST of Lsi09G000890 vs. NCBI nr
Match: gi|1009109138|ref|XP_015888536.1| (PREDICTED: uncharacterized protein LOC107423484 [Ziziphus jujuba]) HSP 1 Score: 341.3 bits (874), Expect = 2.0e-90 Identity = 177/253 (69.96%), Postives = 202/253 (79.84%), Query Frame = 1
BLAST of Lsi09G000890 vs. NCBI nr
Match: gi|657945433|ref|XP_008379899.1| (PREDICTED: uncharacterized protein LOC103442883 [Malus domestica]) HSP 1 Score: 340.1 bits (871), Expect = 4.5e-90 Identity = 176/260 (67.69%), Postives = 203/260 (78.08%), Query Frame = 1
BLAST of Lsi09G000890 vs. NCBI nr
Match: gi|694424596|ref|XP_009340072.1| (PREDICTED: uncharacterized protein LOC103932240 [Pyrus x bretschneideri]) HSP 1 Score: 334.3 bits (856), Expect = 2.5e-88 Identity = 174/260 (66.92%), Postives = 200/260 (76.92%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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